Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0015494

Physical Location & Seq

Genomic Coordinates Forward (+)

4919207 .. 4922415

Gene Structure 3209 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g04350.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2484 bp

ATGAGCTCACAGCTCTTACCACTCACACCTCTCCTCTCCATAACCAACACCAAAACACTACCACCAACAATATCAACTAAACTCCCAACACCAAAATCAACCTCAACATTGCTTTCCCAAACAAGTGAAAGAACCCACCATATCCCATCTCATGTCTACACCCACCCCACCGCCATCCTCCTCGAGCTCTGCACTTCCATGAGAGAGCTCCACCAAATCTTCCCCCTCATAATCAAGAACGGCCTCTACACCGAGCACTACTTCCACACCAAGCTCCTCAGCCTCTTCTGCAAATACAACAGCCCAGCTGAAGCCCACCGCGTTTTCGACTCCGTCGGGGACGACAAGCTCGACGTTTTCTACCACACTCTTCTCAAAGGCTACGCCAAGAGCTCCTCTCTAGCCGACGCCATTTCCTTCTTCTGCCGATTGAAGCGCGACGGGGTTGCCCCTGTTGTGTATAACTTCACATACTTGCTCAAGGCCTGCGGCGACAATGCTGATCTCAGGAGGGGGAAGGAGATTCATGGCTCATTGATTACCAACGGATTCGGGACTAATCTGTTTTCGATGACCGGAGTTGTTAACCTGTATGCGAAATGCAGGCAGATTGATGATGCATATAAGATGTTTGATAGAATGCCTGAGAGGGACTTGGTGTCTTGGAACACTATTGTTGCGGCTTATGCGCAAAATGGGTTCGCCAGGAGAGCTTTGGAGTTGGTTATAAGGATGCAGGAGGAAGGCCAGAGGCCTGATTCCATCACATTGGTCACTGCATTGCCTGCTGTTGCGGATTTCGGGTCGTTGCTGATCGGGAAGTCGGTTCATGCCTATGTGATAAGAGCCAGTTTTGAGTCACTTGTGAACGTTTCTACGGCCCTGCTAGATATGTATTCGAAATGTGGGTCTGTGGCCATTGCTCGGTCGATTTTCAACAGGATGAATCACAAGACTGTTGTTTCCTGGAATTCCATGATAGATGGGTATGTGCAAAATGAAGATCCTGAGGAAGCAATGGTGATTTTCCAGAAGATGTTGGATGAAGGCTTTGAACCGACGAATGTTACTATTATGGAGGCTTTACATGCTTGTGCTGATTTGGGAGATCTTGAGAGGGGAAAGTTCGTGCATAAATTATTGGATCAACTGAACCTTGGATATGATGTCTCGGTTGTGAATTCTTTGATATCCATGTATTCCAAGTGTAAGAGAGTTGATATCGCTGCAAAGTTGTTTAGAGGCTTAAAGGGTAAGACCATCGTCTCATGGAATGCCATGATATTAGGTTTTGCACAGAATGGGCGCGTCAGCGAGGCTTTAAGTCACTTCTGTGAGATGCAGTCTCAGAATATAAAGCCGGATTCATTTACAATGGTGAGTGTAATTCCAGCTCTTGCAGAGTTATCAGTTACACGTCAGGCTAAGTGGATTCATGGACTTGTTGTAAGAAAGTGTTTTGACAAAAATGTTTTTGTGATGACTGCTCTTGTTGATATGTACGCAAAATGTGGAGCTGTCCACACTGCAAGAAAACTTTTTGACATGATGGATGACCGACATGTGACAACATGGAACAGTATGATCGATGGTTATGGAACAAACGGGCTTGGAAAGGCTGCTGTGGAACTGTTCAACGAAATGAAGAAAGGAAAAATAAAGCCAAATGATATAACATTTCTATGTGTGATATCTGCTTGCTCTCATGCAGGTTTAGTGGAAGACGGTCTTCAATTATTTGAAAGCATGAAGGATGACTTTGGCTTGGAGCCAGCAATGGATCACTATGGTGCCATGGTTGATCTTCTTGGTCGAGCTGGCCGACTAAATGAGGCGTGGGATTTTATTCAAAAGATGCCTATGGAACCTGGCATTACAGTCTTCGGCGCAATGTTAGGAGCTTGCAGAATTCATAAAAATGTTGAATTGGGGGAAAAGGCAGCAGATAGAATATTTGAGTTGAACCCTATTGAAGGTGGATACCATGTTTTGCTTGCTAACATATATTATGCAGCTTCAATGTGGGACAAAGTGGCCAAAGTACGAACAATAATGGAGAAGACAGGGCTCAAGAAAACTCCAGGCTGCAGTTTAGTGGAATTAAAGAACCAGGTTCACACTTTCTATTCCGGAAGTACAAGCCATCCCCAATCCAAGAGAATATATACTTATTTGGAGACACTGGGAGATAAGATCAAGGCTGCTGGTTATGTGCCGGACACAAATTCAATTCATGATGTGGAAGATGATGTCAAGGAGCAACTGCTAAATAGCCATAGTGAGAAGCTGGCAATTGCATTCGGACTCTTGAATACTACCGCAGGTACAACAATACACATTCGAAAGAACCTACGAGTTTGTGGTGATTGCCACAATGCAACCAAGTACATTTCACTAGTGACTGGAAGGGAAATCATAGTGCGTGATATGCATCGGTTCCATCATTTCAAGAATGGCACTTGCTCATGTGGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

828

Amino Acids

92.32

Weight (kDa)

8.12

Isoelectric Point (pI)

30.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	218 - 259	5.8e-06	PPR repeat family
PPR_2	PF13041	319 - 358	1.9e-10	PPR repeat family
PPR	PF01535	321 - 351	2.8e-09	PPR repeat
PPR_2	PF13041	420 - 467	1.1e-11	PPR repeat family
PPR	PF01535	422 - 452	2.2e-07	PPR repeat
PPR_2	PF13041	522 - 568	2.1e-14	PPR repeat family
PPR_3	PF13812	522 - 567	8.7e-06	Pentatricopeptide repeat domain
PPR	PF01535	524 - 550	3.4e-08	PPR repeat
E_motif	PF20431	638 - 700	1.8e-18	E motif
DYW_deaminase	PF14432	736 - 827	1.1e-41	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0015494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11290
fragaria_vesca	FvH4_7g04350
malus_domestica	MD07G1040900.v1.1
prunus_persica	Prupe.2G049000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0329341
rosa_laevigata	RLG00000029901
rosa_multiflora	Rmu_co8161036.1_g000001 Rmu_sc0006184.1_g000011 Rmu_sc0039010.1_g000001
rosa_roxburghii	Rroxscaffold_4G00321210
rosa_rugosa	Rorug01G0078700
rosa_samantha	Rh1AG097000 Rh1BG077600 Rh1DG100500
rosa_wichuraiana	Rw1G007520 Rw1G007580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	728
Acc16I	TGCGCA	1 cut(s)	690
Acc36I	ACCTGC	2 cut(s)	1700, 2312
AccB1I	GGYRCC	1 cut(s)	1790
AccI	GTMKAC	1 cut(s)	156
AccII	CGCG	3 cut(s)	321, 438, 1308
AccIII	TCCGGA	1 cut(s)	2129
AciI	CCGC	6 cut(s)	171, 319, 489, 680, 794, 2319
AclI	AACGTT	1 cut(s)	870
AclWI	GGATC	3 cut(s)	998, 1152, 1788
AcoI	YGGCCR	3 cut(s)	915, 1819, 2034
AcsI	RAATTY	4 cut(s)	970, 1180, 1908, 2224
AcuI	CTGAAG	1 cut(s)	330
AcyI	GRCGYC	1 cut(s)	408
AfaI	GTAC	5 cut(s)	1502, 2043, 2137, 2326, 2387
AfiI	CCNNNNNNNGG	2 cut(s)	924, 1973
AflIII	ACRYGT	2 cut(s)	1415, 1561
AhdI	GACNNNNNGTC	1 cut(s)	658
AhlI	ACTAGT	1 cut(s)	2395
AjiI	CACGTC	1 cut(s)	1418
AjnI	CCWGG	5 cut(s)	704, 965, 1867, 2080, 2109
AleI	CACNNNNGTG	2 cut(s)	1332, 1788
Alw21I	GWGCWC	5 cut(s)	8, 189, 210, 258, 395
Alw26I	GTCTC	4 cut(s)	1174, 1270, 1350, 2171
AlwI	GGATC	3 cut(s)	998, 1152, 1788
Ama87I	CYCGRG	1 cut(s)	182
Aor13HI	TCCGGA	1 cut(s)	2129
AoxI	GGCC	8 cut(s)	241, 483, 745, 752, 879, 915, 1819, 2034
ApeKI	GCWGC	6 cut(s)	1226, 1619, 1940, 2012, 2085, 2201
ApoI	RAATTY	4 cut(s)	970, 1180, 1908, 2224
ArsI	GACNNNNNNTTYG	2 cut(s)	893, 925
AspLEI	GCGC	4 cut(s)	438, 691, 1308, 1889
AspS9I	GGNCC	1 cut(s)	880
AsuHPI	GGTGA	3 cut(s)	1033, 1390, 2375
AsuII	TTCGAA	2 cut(s)	899, 2341
AvaI	CYCGRG	1 cut(s)	182
AxyI	CCTNAGG	1 cut(s)	1008
BalI	TGGCCA	2 cut(s)	917, 2036
BanI	GGYRCC	1 cut(s)	1790
BanII	GRGCYC	5 cut(s)	8, 189, 210, 395, 2070
BbsI	GAAGAC	4 cut(s)	1721, 1728, 1873, 2066
Bbv12I	GWGCWC	5 cut(s)	8, 189, 210, 258, 395
BbvCI	CCTCAGC	1 cut(s)	278
BbvI	GCAGC	6 cut(s)	1213, 1606, 1952, 2024, 2072, 2188
BccI	CCATC	9 cut(s)	154, 182, 770, 977, 1268, 1543, 1583, 2151, 2448
BceAI	ACGGC	2 cut(s)	256, 894
BcgI	CGANNNNNNTGC	2 cut(s)	428, 462
BciT130I	CCWGG	5 cut(s)	706, 967, 1869, 2082, 2111
BciVI	GTATCC	1 cut(s)	1973
BcoDI	GTCTC	4 cut(s)	1174, 1270, 1350, 2171
BcuI	ACTAGT	1 cut(s)	2395
BfaI	CTAG	3 cut(s)	401, 887, 2396
BfmI	CTRYAG	1 cut(s)	2086
BfuAI	ACCTGC	2 cut(s)	1700, 2312
BfuI	GTATCC	1 cut(s)	1973
BglII	AGATCT	1 cut(s)	1108
BisI	GCNGC	8 cut(s)	490, 681, 1227, 1620, 1941, 2013, 2086, 2202
BlsI	GCNGC	8 cut(s)	491, 682, 1228, 1621, 1942, 2014, 2087, 2203
Bme1390I	CCNGG	5 cut(s)	706, 967, 1869, 2082, 2111
BmeRI	GACNNNNNGTC	1 cut(s)	658
BmeT110I	CYCGRG	1 cut(s)	182
BmgBI	CACGTC	1 cut(s)	1418
BmgT120I	GGNCC	1 cut(s)	880
BmiI	GGNNCC	4 cut(s)	1770, 1792, 1866, 2438
BmrFI	CCNGG	5 cut(s)	706, 967, 1869, 2082, 2111
BmrI	ACTGGG	1 cut(s)	2192
BmsI	GCATC	5 cut(s)	607, 723, 1329, 1845, 2440
BmuI	ACTGGG	1 cut(s)	2192
BoxI	GACNNNNGTC	1 cut(s)	1262
BpiI	GAAGAC	4 cut(s)	1721, 1728, 1873, 2066
BplI	GAGNNNNNCTC	2 cut(s)	382, 414
BpmI	CTGGAG	1 cut(s)	2064
Bpu10I	CCTNAGC	1 cut(s)	278
Bpu14I	TTCGAA	2 cut(s)	899, 2341
BpuEI	CTTGAG	3 cut(s)	464, 1133, 2054
Bsa29I	ATCGAT	1 cut(s)	1587
BsaBI	GATNNNNATC	1 cut(s)	2430
BsaHI	GRCGYC	1 cut(s)	408
BsaJI	CCNNGG	2 cut(s)	1156, 1794
BsaWI	WCCGGW	2 cut(s)	575, 2129
Bsc4I	CCNNNNNNNGG	2 cut(s)	924, 1973
Bse1I	ACTGG	3 cut(s)	849, 2187, 2407
Bse21I	CCTNAGG	1 cut(s)	1008
Bse3DI	GCAATG	6 cut(s)	107, 779, 918, 1023, 1782, 1896
Bse8I	GATNNNNATC	1 cut(s)	2430
BseAI	TCCGGA	1 cut(s)	2129
BseBI	CCWGG	5 cut(s)	706, 967, 1869, 2082, 2111
BseCI	ATCGAT	1 cut(s)	1587
BseDI	CCNNGG	2 cut(s)	1156, 1794
BseGI	GGATG	7 cut(s)	174, 738, 948, 1048, 1558, 1759, 2143
BseJI	GATNNNNATC	1 cut(s)	2430
BseLI	CCNNNNNNNGG	2 cut(s)	924, 1973
BseMI	GCAATG	6 cut(s)	107, 779, 918, 1023, 1782, 1896
BseMII	CTCAG	5 cut(s)	292, 520, 636, 999, 1361
BseNI	ACTGG	3 cut(s)	849, 2187, 2407
BseRI	GAGGAG	4 cut(s)	23, 170, 266, 385
BseXI	GCAGC	6 cut(s)	1213, 1606, 1952, 2024, 2072, 2188
BseYI	CCCAGC	1 cut(s)	304
BsgI	GTGCAG	1 cut(s)	175
Bsh1236I	CGCG	3 cut(s)	321, 438, 1308
Bsh1285I	CGRYCG	1 cut(s)	929
BshFI	GGCC	8 cut(s)	243, 485, 747, 754, 881, 917, 1821, 2036
BshNI	GGYRCC	1 cut(s)	1790
BshVI	ATCGAT	1 cut(s)	1587
BsiEI	CGRYCG	1 cut(s)	929
BsiHKAI	GWGCWC	5 cut(s)	8, 189, 210, 258, 395
BsiHKCI	CYCGRG	1 cut(s)	182
BsiSI	CCGG	4 cut(s)	576, 1361, 2130, 2216
BslFI	GGGAC	4 cut(s)	353, 568, 665, 2039
BslI	CCNNNNNNNGG	2 cut(s)	924, 1973
BsmAI	GTCTC	4 cut(s)	1174, 1270, 1350, 2171
BsmBI	CGTCTC	1 cut(s)	1270
BsmFI	GGGAC	4 cut(s)	353, 568, 665, 2039
BsmI	GAATGC	3 cut(s)	645, 1279, 2297
BsnI	GGCC	8 cut(s)	243, 485, 747, 754, 881, 917, 1821, 2036
BsoBI	CYCGRG	1 cut(s)	182
Bsp119I	TTCGAA	2 cut(s)	899, 2341
Bsp1286I	GDGCHC	6 cut(s)	8, 189, 210, 258, 395, 2070
Bsp13I	TCCGGA	1 cut(s)	2129
Bsp143I	GATC	9 cut(s)	502, 813, 1003, 1108, 1144, 1584, 1780, 1801, 2193
Bsp19I	CCATGG	1 cut(s)	1794
BspACI	CCGC	6 cut(s)	171, 319, 489, 680, 794, 2319
BspANI	GGCC	8 cut(s)	243, 485, 747, 754, 881, 917, 1821, 2036
BspCNI	CTCAG	5 cut(s)	291, 519, 637, 1000, 1360
BspDI	ATCGAT	1 cut(s)	1587
BspEI	TCCGGA	1 cut(s)	2129
BspFNI	CGCG	3 cut(s)	321, 438, 1308
BspHI	TCATGA	1 cut(s)	2233
BspLI	GGNNCC	4 cut(s)	1770, 1792, 1866, 2438
BspMAI	CTGCAG	1 cut(s)	2090
BspMI	ACCTGC	2 cut(s)	1700, 2312
BspPI	GGATC	3 cut(s)	998, 1152, 1788
BspT104I	TTCGAA	2 cut(s)	899, 2341
BspT107I	GGYRCC	1 cut(s)	1790
BsrDI	GCAATG	6 cut(s)	107, 779, 918, 1023, 1782, 1896
BsrI	ACTGG	3 cut(s)	849, 2187, 2407
BssECI	CCNNGG	2 cut(s)	1156, 1794
BssMI	GATC	9 cut(s)	502, 813, 1003, 1108, 1144, 1584, 1780, 1801, 2193
BssNI	GRCGYC	1 cut(s)	408
BssT1I	CCWWGG	2 cut(s)	1156, 1794
Bst2UI	CCWGG	5 cut(s)	706, 967, 1869, 2082, 2111
Bst4CI	ACNGT	5 cut(s)	958, 1580, 1632, 1727, 1879
Bst6I	CTCTTC	2 cut(s)	290, 375
BstACI	GRCGYC	1 cut(s)	408
BstAPI	GCANNNNNTGC	1 cut(s)	785
BstBI	TTCGAA	2 cut(s)	899, 2341
BstC8I	GCNNGC	9 cut(s)	487, 605, 786, 1699, 1773, 1819, 1903, 1995, 2289
BstDEI	CTNAG	6 cut(s)	278, 506, 645, 1008, 1347, 1425
BstDSI	CCRYGG	1 cut(s)	1794
BstENI	CCTNNNNNAGG	1 cut(s)	1971
BstF5I	GGATG	7 cut(s)	174, 738, 948, 1048, 1558, 1759, 2143
BstFNI	CGCG	3 cut(s)	321, 438, 1308
BstHHI	GCGC	4 cut(s)	438, 691, 1308, 1889
BstKTI	GATC	9 cut(s)	505, 816, 1006, 1111, 1147, 1587, 1783, 1804, 2196
BstMAI	GTCTC	4 cut(s)	1174, 1270, 1350, 2171
BstMBI	GATC	9 cut(s)	502, 813, 1003, 1108, 1144, 1584, 1780, 1801, 2193
BstMCI	CGRYCG	1 cut(s)	929
BstMWI	GCNNNNNNNGC	6 cut(s)	288, 686, 710, 785, 1088, 2428
BstNI	CCWGG	5 cut(s)	706, 967, 1869, 2082, 2111
BstNSI	RCATGY	2 cut(s)	1091, 1565
BstPAI	GACNNNNGTC	1 cut(s)	1262
BstSCI	CCNGG	5 cut(s)	704, 965, 1867, 2080, 2109
BstSFI	CTRYAG	1 cut(s)	2086
BstUI	CGCG	3 cut(s)	321, 438, 1308
BstV1I	GCAGC	6 cut(s)	1213, 1606, 1952, 2024, 2072, 2188
BstV2I	GAAGAC	4 cut(s)	1721, 1728, 1873, 2066
BstX2I	RGATCY	2 cut(s)	1003, 1108
BstXI	CCANNNNNNTGG	1 cut(s)	769
BstYI	RGATCY	2 cut(s)	1003, 1108
Bsu15I	ATCGAT	1 cut(s)	1587
Bsu36I	CCTNAGG	1 cut(s)	1008
BsuI	GTATCC	1 cut(s)	1973
BsuRI	GGCC	8 cut(s)	243, 485, 747, 754, 881, 917, 1821, 2036
BsuTUI	ATCGAT	1 cut(s)	1587
BtgI	CCRYGG	1 cut(s)	1794
BtrI	CACGTC	1 cut(s)	1418
BtsCI	GGATG	7 cut(s)	174, 738, 948, 1048, 1558, 1759, 2143
BtsI	GCAGTG	2 cut(s)	774, 1524
BtsIMutI	CAGTG	3 cut(s)	774, 1524, 2180
BveI	ACCTGC	2 cut(s)	1700, 2312
Cac8I	GCNNGC	9 cut(s)	487, 605, 786, 1699, 1773, 1819, 1903, 1995, 2289
CciI	TCATGA	1 cut(s)	2233
CfoI	GCGC	4 cut(s)	438, 691, 1308, 1889
Cfr13I	GGNCC	1 cut(s)	880
ClaI	ATCGAT	1 cut(s)	1587
CseI	GACGC	2 cut(s)	416, 1297
CsiI	ACCWGGT	1 cut(s)	2109
Csp6I	GTAC	5 cut(s)	1501, 2042, 2136, 2325, 2386
CviQI	GTAC	5 cut(s)	1501, 2042, 2136, 2325, 2386
DdeI	CTNAG	6 cut(s)	278, 506, 645, 1008, 1347, 1425
DpnI	GATC	9 cut(s)	504, 815, 1005, 1110, 1146, 1586, 1782, 1803, 2195
DpnII	GATC	9 cut(s)	502, 813, 1003, 1108, 1144, 1584, 1780, 1801, 2193
DriI	GACNNNNNGTC	1 cut(s)	658
EaeI	YGGCCR	3 cut(s)	915, 1819, 2034
Eam1104I	CTCTTC	2 cut(s)	290, 375
Eam1105I	GACNNNNNGTC	1 cut(s)	658
EarI	CTCTTC	2 cut(s)	290, 375
Ecl136II	GAGCTC	4 cut(s)	6, 187, 208, 393
Eco130I	CCWWGG	2 cut(s)	1156, 1794
Eco147I	AGGCCT	2 cut(s)	485, 754
Eco24I	GRGCYC	5 cut(s)	8, 189, 210, 395, 2070
Eco32I	GATATC	3 cut(s)	1191, 1222, 1692
Eco53kI	GAGCTC	4 cut(s)	6, 187, 208, 393
Eco57I	CTGAAG	1 cut(s)	330
Eco81I	CCTNAGG	1 cut(s)	1008
Eco88I	CYCGRG	1 cut(s)	182
EcoICRI	GAGCTC	4 cut(s)	6, 187, 208, 393
EcoNI	CCTNNNNNAGG	1 cut(s)	1971
EcoRI	GAATTC	3 cut(s)	970, 1180, 1908
EcoRII	CCWGG	5 cut(s)	704, 965, 1867, 2080, 2109
EcoRV	GATATC	3 cut(s)	1191, 1222, 1692
EcoT14I	CCWWGG	2 cut(s)	1156, 1794
EcoT22I	ATGCAT	2 cut(s)	622, 2433
EcoT38I	GRGCYC	5 cut(s)	8, 189, 210, 395, 2070
ErhI	CCWWGG	2 cut(s)	1156, 1794
Esp3I	CGTCTC	1 cut(s)	1270
FalI	AAGNNNNNCTT	4 cut(s)	1713, 1745, 1742, 1774
FaqI	GGGAC	4 cut(s)	353, 568, 665, 2039
FblI	GTMKAC	1 cut(s)	156
Fnu4HI	GCNGC	8 cut(s)	490, 681, 1227, 1620, 1941, 2013, 2086, 2202
FokI	GGATG	7 cut(s)	161, 745, 955, 1055, 1565, 1766, 2130
FriOI	GRGCYC	5 cut(s)	8, 189, 210, 395, 2070
Fsp4HI	GCNGC	8 cut(s)	490, 681, 1227, 1620, 1941, 2013, 2086, 2202
FspBI	CTAG	3 cut(s)	401, 887, 2396
FspI	TGCGCA	1 cut(s)	690
GlaI	GCGC	4 cut(s)	437, 690, 1307, 1888
GluI	GCNGC	8 cut(s)	490, 681, 1227, 1620, 1941, 2013, 2086, 2202
GsaI	CCCAGC	1 cut(s)	308
GsuI	CTGGAG	1 cut(s)	2064
HaeIII	GGCC	8 cut(s)	243, 485, 747, 754, 881, 917, 1821, 2036
HapII	CCGG	4 cut(s)	576, 1361, 2130, 2216
HgaI	GACGC	2 cut(s)	416, 1297
HhaI	GCGC	4 cut(s)	438, 691, 1308, 1889
Hin1I	GRCGYC	1 cut(s)	408
Hin6I	GCGC	4 cut(s)	436, 689, 1306, 1887
HinP1I	GCGC	4 cut(s)	436, 689, 1306, 1887
HincII	GTYRAC	1 cut(s)	586
HindII	GTYRAC	1 cut(s)	586
HinfI	GANTC	9 cut(s)	329, 523, 549, 758, 857, 946, 1364, 1432, 2304
HpaI	GTTAAC	1 cut(s)	586
HpaII	CCGG	4 cut(s)	576, 1361, 2130, 2216
HphI	GGTGA	3 cut(s)	1033, 1390, 2375
Hpy166II	GTNNAC	5 cut(s)	157, 586, 868, 1522, 2116
Hpy188I	TCNGA	2 cut(s)	1350, 2303
Hpy8I	GTNNAC	5 cut(s)	157, 586, 868, 1522, 2116
Hpy99I	CGWCG	5 cut(s)	338, 356, 410, 443, 1063
HpyAV	CCTTC	7 cut(s)	427, 511, 737, 1040, 1744, 1967, 2400
HpyCH4III	ACNGT	5 cut(s)	958, 1580, 1632, 1727, 1879
HpyCH4IV	ACGT	3 cut(s)	354, 870, 1417
HpyF10VI	GCNNNNNNNGC	6 cut(s)	288, 686, 710, 785, 1088, 2428
HpyF3I	CTNAG	6 cut(s)	278, 506, 645, 1008, 1347, 1425
HpySE526I	ACGT	3 cut(s)	354, 870, 1417
Hsp92I	GRCGYC	1 cut(s)	408
HspAI	GCGC	4 cut(s)	436, 689, 1306, 1887
Kpn2I	TCCGGA	1 cut(s)	2129
KspAI	GTTAAC	1 cut(s)	586
Kzo9I	GATC	9 cut(s)	502, 813, 1003, 1108, 1144, 1584, 1780, 1801, 2193
LmnI	GCTCC	7 cut(s)	213, 279, 398, 1514, 1768, 1898, 2257
Lsp1109I	GCAGC	6 cut(s)	1213, 1606, 1952, 2024, 2072, 2188
LweI	GCATC	5 cut(s)	607, 723, 1329, 1845, 2440
MabI	ACCWGGT	1 cut(s)	2109
MaeI	CTAG	3 cut(s)	401, 887, 2396
MaeII	ACGT	3 cut(s)	354, 870, 1417
MaeIII	GTNAC	7 cut(s)	772, 858, 1066, 1325, 1411, 1564, 2398
MalI	GATC	9 cut(s)	504, 815, 1005, 1110, 1146, 1586, 1782, 1803, 2195
MboI	GATC	9 cut(s)	502, 813, 1003, 1108, 1144, 1584, 1780, 1801, 2193
MfeI	CAATTG	1 cut(s)	2292
MflI	RGATCY	2 cut(s)	1003, 1108
MhlI	GDGCHC	6 cut(s)	8, 189, 210, 258, 395, 2070
MlsI	TGGCCA	2 cut(s)	917, 2036
MluNI	TGGCCA	2 cut(s)	917, 2036
MlyI	GAGTC	3 cut(s)	323, 866, 2298
MmeI	TCCRAC	1 cut(s)	1020
Mox20I	TGGCCA	2 cut(s)	917, 2036
Mph1103I	ATGCAT	2 cut(s)	622, 2433
MroI	TCCGGA	1 cut(s)	2129
MscI	TGGCCA	2 cut(s)	917, 2036
MseI	TTAA	4 cut(s)	585, 1247, 1322, 2102
MslI	CAYNNNNRTG	7 cut(s)	197, 834, 1092, 1332, 1681, 1788, 1917
Msp20I	TGGCCA	2 cut(s)	917, 2036
MspA1I	CMGCKG	1 cut(s)	308
MspI	CCGG	4 cut(s)	576, 1361, 2130, 2216
MspR9I	CCNGG	5 cut(s)	706, 967, 1869, 2082, 2111
MunI	CAATTG	1 cut(s)	2292
Mva1269I	GAATGC	3 cut(s)	645, 1279, 2297
MvaI	CCWGG	5 cut(s)	706, 967, 1869, 2082, 2111
MvnI	CGCG	3 cut(s)	321, 438, 1308
MwoI	GCNNNNNNNGC	6 cut(s)	288, 686, 710, 785, 1088, 2428
NcoI	CCATGG	1 cut(s)	1794
NdeII	GATC	9 cut(s)	502, 813, 1003, 1108, 1144, 1584, 1780, 1801, 2193
NlaIV	GGNNCC	4 cut(s)	1770, 1792, 1866, 2438
NmuCI	GTSAC	5 cut(s)	772, 858, 1325, 1564, 2398
NsbI	TGCGCA	1 cut(s)	690
NsiI	ATGCAT	2 cut(s)	622, 2433
NspI	RCATGY	2 cut(s)	1091, 1565
NspV	TTCGAA	2 cut(s)	899, 2341
OliI	CACNNNNGTG	2 cut(s)	1332, 1788
PaeR7I	CTCGAG	1 cut(s)	182
PagI	TCATGA	1 cut(s)	2233
PceI	AGGCCT	2 cut(s)	485, 754
PciI	ACATGT	1 cut(s)	1561
PcsI	WCGNNNNNNNCGW	2 cut(s)	348, 1819
PctI	GAATGC	3 cut(s)	645, 1279, 2297
PfeI	GAWTC	6 cut(s)	523, 549, 758, 946, 1364, 1432
PflFI	GACNNNGTC	1 cut(s)	332
PfoI	TCCNGGA	1 cut(s)	965
PkrI	GCNGC	8 cut(s)	491, 682, 1228, 1621, 1942, 2014, 2087, 2203
PleI	GAGTC	3 cut(s)	323, 865, 2298
PpsI	GAGTC	3 cut(s)	323, 865, 2298
PscI	ACATGT	1 cut(s)	1561
PshAI	GACNNNNGTC	1 cut(s)	1262
PsiI	TTATAA	1 cut(s)	728
Psp124BI	GAGCTC	4 cut(s)	8, 189, 210, 395
Psp1406I	AACGTT	1 cut(s)	870
Psp6I	CCWGG	5 cut(s)	704, 965, 1867, 2080, 2109
PspFI	CCCAGC	1 cut(s)	304
PspGI	CCWGG	5 cut(s)	704, 965, 1867, 2080, 2109
PspN4I	GGNNCC	4 cut(s)	1770, 1792, 1866, 2438
PspPI	GGNCC	1 cut(s)	880
PspXI	VCTCGAGB	1 cut(s)	182
PsrI	GAACNNNNNNTAC	2 cut(s)	230, 262
PstI	CTGCAG	1 cut(s)	2090
PsuI	RGATCY	2 cut(s)	1003, 1108
PsyI	GACNNNGTC	1 cut(s)	332
PvuII	CAGCTG	1 cut(s)	308
RsaI	GTAC	5 cut(s)	1502, 2043, 2137, 2326, 2387
RsaNI	GTAC	5 cut(s)	1501, 2042, 2136, 2325, 2386
RseI	CAYNNNNRTG	7 cut(s)	197, 834, 1092, 1332, 1681, 1788, 1917
SacI	GAGCTC	4 cut(s)	8, 189, 210, 395
SaqAI	TTAA	4 cut(s)	585, 1247, 1322, 2102
SatI	GCNGC	8 cut(s)	490, 681, 1227, 1620, 1941, 2013, 2086, 2202
Sau3AI	GATC	9 cut(s)	502, 813, 1003, 1108, 1144, 1584, 1780, 1801, 2193
Sau96I	GGNCC	1 cut(s)	880
SchI	GAGTC	3 cut(s)	323, 866, 2298
ScrFI	CCNGG	5 cut(s)	706, 967, 1869, 2082, 2111
SduI	GDGCHC	6 cut(s)	8, 189, 210, 258, 395, 2070
SexAI	ACCWGGT	1 cut(s)	2109
SfaNI	GCATC	5 cut(s)	607, 723, 1329, 1845, 2440
SfcI	CTRYAG	1 cut(s)	2086
Sfr274I	CTCGAG	1 cut(s)	182
SfuI	TTCGAA	2 cut(s)	899, 2341
SlaI	CTCGAG	1 cut(s)	182
SmiMI	CAYNNNNRTG	7 cut(s)	197, 834, 1092, 1332, 1681, 1788, 1917
SmlI	CTYRAG	4 cut(s)	182, 479, 1112, 2069
SmoI	CTYRAG	4 cut(s)	182, 479, 1112, 2069
SpeI	ACTAGT	1 cut(s)	2395
SseBI	AGGCCT	2 cut(s)	485, 754
SsiI	CCGC	6 cut(s)	171, 319, 489, 680, 794, 2319
SspI	AATATT	1 cut(s)	1953
SspMI	CTAG	3 cut(s)	401, 887, 2396
SstI	GAGCTC	4 cut(s)	8, 189, 210, 395
StuI	AGGCCT	2 cut(s)	485, 754
StyD4I	CCNGG	5 cut(s)	704, 965, 1867, 2080, 2109
StyI	CCWWGG	2 cut(s)	1156, 1794
TaaI	ACNGT	5 cut(s)	958, 1580, 1632, 1727, 1879
TaiI	ACGT	3 cut(s)	357, 873, 1420
TaqI	TCGA	9 cut(s)	183, 327, 351, 569, 899, 929, 1587, 1813, 2341
TaqII	GACCGA	2 cut(s)	915, 1572
TatI	WGTACW	2 cut(s)	2135, 2385
TauI	GCSGC	2 cut(s)	492, 683
TfiI	GAWTC	6 cut(s)	523, 549, 758, 946, 1364, 1432
Tru1I	TTAA	4 cut(s)	585, 1247, 1322, 2102
Tru9I	TTAA	4 cut(s)	585, 1247, 1322, 2102
TscAI	CASTG	3 cut(s)	781, 1531, 2187
TseFI	GTSAC	5 cut(s)	772, 858, 1325, 1564, 2398
TseI	GCWGC	6 cut(s)	1226, 1619, 1940, 2012, 2085, 2201
Tsp45I	GTSAC	5 cut(s)	772, 858, 1325, 1564, 2398
TspGWI	ACGGA	2 cut(s)	322, 561
TspRI	CASTG	3 cut(s)	781, 1531, 2187
Tth111I	GACNNNGTC	1 cut(s)	332
XagI	CCTNNNNNAGG	1 cut(s)	1971
XapI	RAATTY	4 cut(s)	970, 1180, 1908, 2224
XceI	RCATGY	2 cut(s)	1091, 1565
XcmI	CCANNNNNNNNNTGG	1 cut(s)	712
XhoI	CTCGAG	1 cut(s)	182
XmiI	GTMKAC	1 cut(s)	156
XspI	CTAG	3 cut(s)	401, 887, 2396
Zsp2I	ATGCAT	2 cut(s)	622, 2433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.