AT1G11950
ERF Family

A domain family that is part of the cupin metalloenzyme superfamily.

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0004714
Physical Location & Seq
Reverse (-)
4034479 .. 4039065
4587 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G11950.3

Sequence Viewer

Length: 2628 bp
ATGGAGGGTGAAGTTGCTACTAACGGAGTGATTCTCAAGCATAATGGTGTAAAGGATATTTCTTTAGAAACTTGTTGGCCAGAGAAGAAGAAACCGGTTGAGGCAACGAGTCTTAGCAGTGGTTCATCAGACATAGAAGAAGAGATTAGTGTGGAATGTCCTAAGCGAGTGGCTAATCAAAGACGGAAACGGTCTAAAGCTGATGAGATTAAAACGAAATCTTCAAGAAAGAGGAAATGTGATGATGAGAACAAGTGTGAAGAGAATGAGAAGAAGCAGAGGAGCTCTGTTAAAAAGAGAGCAACTACATGGAAAGAAGAAGAAGTTGTTGTTGATGATGAAAAGAAATGCGAACAACAACTCCAACTAGTTCCTTCCAGCAAGGCAACATCTCGAAGCAGGAGCAAGAAATCAGTCAGTGTGGATACTTGGTTGGTTAACAACGAGATTGATGTTAGCGCTTTGAGTTCGCGTTCTGAGTCTGAACTTTCGGATTCTTATCTGAAAACCGAGTACTTTAATGACTGCAGAAGCATGACAAGGAGTTTAAAGGCAAATTTGGGAGAGCTTGCAATTTGCCATCAATGCTCTAAAGGGGAAAGAAGATATCTTTTCATTTGCACCTTTTGTGAAGTGAGGTTGTATTGTTTTCCATGCATAAAGAAATGGTATCCCCATTTGTCCACGGATGATATCCTTGAAAAATGTCCCTTTTGCCGAGGAACTTGCAACTGCTGCACATGTTTGCACTCTAGTGGTTTAATCGAGACATCTAAGAGAAAGCTCGATAAATACGAAAGATTTTATCATCTTCGCTTCTTGATTGTGGCGATGCTTCCTTTCCTGAAAAAGTTATGCAAAGCACAAGATCAAGAAATCGAAACCGAGGCTAAGGTTCAAGATTCAATGGCTTCTCAAGTTGATATATCCGAGAGTCTATGCTCAAATGAAGAGCGTGTCTTCTGTAACCACTGTGCAACATCAATTGTTGACTTGCATCGAAGCTGTCCAAAGTGTTCATATGAATTGTGTCTGAACTGTTGCCAAGAGATCCGTGGAGGTTGGCTTTCTGACCGCCCGGAATGTCAGCTACAATTCGAGTACAGAGGGACCCGGTATATACATGGCGAAGCTGCAGAACCGAGCTCTTCTTCTGTTTCCGAGGATGAAACTAAAACTCCATCCATCAAGTGGAATGCTGATGAAAATGGAAGCATACGGTGTGCGCCAAAAGAGCTAGGAGGTTGCGGGGACTCTGTGCTGGAGCTTAAGCGAATCTTACCAGTGACTTGGATGTCAGATTTGGAGCAAAAGGCAGAAACATTCTTAGCCTCTTATAGTATCAAACCGCCAATGTCATATTGTAGATGTTCTTCTGATATGAGTAGTATGAAGAGGAAGGCAGCTTCGAGGGACGGATCTAGTGACAATTACCTTTATTCTCCTGATTCTTTGGATGTCCTGAAGCAAGAAGAACTTCTGCATTTCCAAGAGCATTGGTCCAAAGGTGAACCAGTGATTGTTCGAAATGCTCTTAACAACACAGCTGGTTTAAGCTGGGAGCCAATGGTGATGTGGCGGGCTTTATGTGAGAATGTTGATTCAGCAATTAGCTCTAATATGTCTGATGTCAAAGCTATCGATTGTTTAGCTAATTGTGAGGTGAAGATAAATACTCTATGTTTCTTTGAAGGATATAGCAAAGGAAGAACATATGAAAACTTCTGGCCTGAGATGCTGAAGCTGAAGGATTGGCCTCCTTCAGACAAGTTTGAAAACCTTTTACCTCGTCACTGCGATGAGTTCATTTCCGCATTACCATTTCAAGAATACAGCGATCCTAGATCAGGAATTCTCAACATTGCTACAAAACTTCCTGAAGGACTTCTTAAACCAGATCTTGGTCCAAAAACTTATGTTGCATATGGGACTTCAGATGAGCTCGGTAGAGGAGATTCAGTCACTAAGCTTCACTGTGATATGTCAGATGCTGTTAATATTCTGATGCATACTGCTGAAGTAACACTAAGTGAGGAGCAAAGGTCTGCAATTGCAGATTTGAAACAGAAACATAAGCAACAGAATGAGAAAGAGCTTCAGGAGCAAAATGGTTTAGAGGAAGAAGAGGTTGTGAGTGATGAGATTGTGGTTTATGATGAAACAAGTGGTGCACTTTGGGACATCTTTAAAAGAGAAGATGTTCCTAAGCTTGAAGAGTATCTAAGGAAGCATTGCATAGAATTCAGACATACTTATTGCTCTCGTGTTACAAAGGTGTATCATCCAATACATGATCAGTCATATTTCTTAACCGTGGAGCATAAAAGAAAACTCAAGGCAGAATTTGGGATTGAGCCATGGACATTTGTGCAAAAGCTAGGAGAAGCAGTGTTTATTCCAGCAGGTTGTCCTCATCAAGTTCGGAATCTCAAGTCGTGCACAAAGGTAGCTGTTGATTTTGTTTCCCCTGAAAACATCGATGAGTGTCTCCGTTTGACTGATGAGTTTCGACAACTCCCTAAGAACCATAAAGCCAGAGAAGACAAACTTGAGATAAAAAAGATGGTGATCTATGCAGTTGAACAAGCTCTGAAAGAAGTGGAGACATTATTGCTAGATCGCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 map04714
Pfam Domains
Protein Families
JmjC zf-4CXXC_R1

Protein Analysis

875

Amino Acids

100.14

Weight (kDa)

5.82

Isoelectric Point (pI)

57.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC PF02373 721 - 820 5e-14 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1294
Acc36I ACCTGC 1 cut(s) 2393
AccB7I CCANNNNNTGG 2 cut(s) 1191, 1901
AccII CGCG 1 cut(s) 472
AciI CCGC 5 cut(s) 1075, 1248, 1349, 1579, 1812
AclWI GGATC 3 cut(s) 1045, 1426, 1832
AcoI YGGCCR 1 cut(s) 77
AcsI RAATTY 4 cut(s) 556, 1851, 2240, 2342
AcuI CTGAAG 8 cut(s) 1484, 1746, 1760, 1766, 1899, 1917, 2037, 2081
AdeI CACNNNGTG 1 cut(s) 2030
AfaI GTAC 2 cut(s) 515, 1103
AfeI AGCGCT 1 cut(s) 460
AfiI CCNNNNNNNGG 3 cut(s) 1191, 1847, 1901
AflII CTTAAG 1 cut(s) 1268
AflIII ACRYGT 1 cut(s) 740
AgeI ACCGGT 1 cut(s) 94
AhlI ACTAGT 1 cut(s) 367
AleI CACNNNNGTG 1 cut(s) 753
AloI GAACNNNNNNTCC 2 cut(s) 345, 377
Alw21I GWGCWC 5 cut(s) 287, 1148, 1944, 2173, 2441
Alw26I GTCTC 3 cut(s) 761, 2492, 2597
Alw44I GTGCAC 2 cut(s) 2169, 2437
AlwI GGATC 3 cut(s) 1045, 1426, 1832
AlwNI CAGNNNCTG 1 cut(s) 1991
Aor51HI AGCGCT 1 cut(s) 460
AoxI GGCC 3 cut(s) 77, 1727, 1754
ApaLI GTGCAC 2 cut(s) 2169, 2437
ApeKI GCWGC 4 cut(s) 735, 1133, 1403, 2622
ApoI RAATTY 4 cut(s) 556, 1851, 2240, 2342
AsiGI ACCGGT 1 cut(s) 94
Asp700I GAANNNNTTC 3 cut(s) 1476, 1884, 2199
AspLEI GCGC 2 cut(s) 461, 1228
AspS9I GGNCC 3 cut(s) 1110, 1500, 1904
AsuC2I CCSGG 2 cut(s) 1079, 1114
AsuHPI GGTGA 5 cut(s) 20, 1520, 1582, 1675, 2578
AsuII TTCGAA 1 cut(s) 1525
AvaII GGWCC 3 cut(s) 1110, 1500, 1904
BaeGI GKGCMC 2 cut(s) 2173, 2441
BalI TGGCCA 1 cut(s) 79
BanII GRGCYC 3 cut(s) 287, 1148, 1944
BarI GAAGNNNNNNTAC 2 cut(s) 1357, 1389
BauI CACGAG 1 cut(s) 2262
BbsI GAAGAC 2 cut(s) 952, 2547
Bbv12I GWGCWC 5 cut(s) 287, 1148, 1944, 2173, 2441
BbvI GCAGC 3 cut(s) 722, 1120, 1415
BccI CCATC 4 cut(s) 588, 1189, 1193, 2557
BcgI CGANNNNNNTGC 2 cut(s) 708, 742
BciVI GTATCC 2 cut(s) 418, 681
BclI TGATCA 1 cut(s) 2293
BcnI CCSGG 2 cut(s) 1079, 1114
BcoDI GTCTC 3 cut(s) 761, 2492, 2597
BcuI ACTAGT 1 cut(s) 367
BfaI CTAG 7 cut(s) 368, 753, 1238, 1422, 1842, 2378, 2615
BfmI CTRYAG 2 cut(s) 526, 1134
BfoI RGCGCY 1 cut(s) 462
BfrI CTTAAG 1 cut(s) 1268
BfuAI ACCTGC 1 cut(s) 2393
BfuI GTATCC 2 cut(s) 418, 681
BglII AGATCT 1 cut(s) 1897
BisI GCNGC 4 cut(s) 736, 1134, 1404, 2623
BlsI GCNGC 4 cut(s) 737, 1135, 1405, 2624
BmcAI AGTACT 1 cut(s) 515
Bme1390I CCNGG 2 cut(s) 1079, 1114
Bme18I GGWCC 3 cut(s) 1110, 1500, 1904
BmgT120I GGNCC 3 cut(s) 1110, 1500, 1904
BmiI GGNNCC 3 cut(s) 1111, 1112, 1563
BmrFI CCNGG 2 cut(s) 1079, 1114
BmsI GCATC 5 cut(s) 822, 1006, 1725, 1978, 1995
BpiI GAAGAC 2 cut(s) 952, 2547
BplI GAGNNNNNCTC 2 cut(s) 18, 50
BpmI CTGGAG 1 cut(s) 1283
Bpu10I CCTNAGC 3 cut(s) 162, 891, 2205
Bpu14I TTCGAA 1 cut(s) 1525
BpuEI CTTGAG 5 cut(s) 20, 900, 2318, 2414, 2570
BpuMI CCSGG 2 cut(s) 1079, 1114
Bsa29I ATCGAT 2 cut(s) 1641, 2478
BsaBI GATNNNNATC 2 cut(s) 498, 2567
BsaJI CCNNGG 7 cut(s) 684, 718, 885, 1054, 1161, 2313, 2357
BsaWI WCCGGW 1 cut(s) 94
Bsc4I CCNNNNNNNGG 3 cut(s) 1191, 1847, 1901
Bse118I RCCGGY 1 cut(s) 94
Bse1I ACTGG 2 cut(s) 1283, 1514
Bse3DI GCAATG 2 cut(s) 1860, 2230
Bse8I GATNNNNATC 2 cut(s) 498, 2567
BseCI ATCGAT 2 cut(s) 1641, 2478
BseDI CCNNGG 7 cut(s) 684, 718, 885, 1054, 1161, 2313, 2357
BseGI GGATG 6 cut(s) 694, 1171, 1181, 1299, 1462, 2281
BseJI GATNNNNATC 2 cut(s) 498, 2567
BseLI CCNNNNNNNGG 3 cut(s) 1191, 1847, 1901
BseMI GCAATG 2 cut(s) 1860, 2230
BseMII CTCAG 2 cut(s) 468, 1722
BseNI ACTGG 2 cut(s) 1283, 1514
BseRI GAGGAG 3 cut(s) 295, 1965, 2048
BseSI GKGCMC 2 cut(s) 2173, 2441
BseXI GCAGC 3 cut(s) 722, 1120, 1415
BseYI CCCAGC 1 cut(s) 1557
BsgI GTGCAG 1 cut(s) 721
Bsh1236I CGCG 1 cut(s) 472
BshFI GGCC 3 cut(s) 79, 1729, 1756
BshTI ACCGGT 1 cut(s) 94
BshVI ATCGAT 2 cut(s) 1641, 2478
BsiHKAI GWGCWC 5 cut(s) 287, 1148, 1944, 2173, 2441
BsiSI CCGG 3 cut(s) 95, 1079, 1114
BslFI GGGAC 6 cut(s) 693, 1123, 1265, 1427, 1942, 2192
BslI CCNNNNNNNGG 3 cut(s) 1191, 1847, 1901
BsmAI GTCTC 3 cut(s) 761, 2492, 2597
BsmFI GGGAC 6 cut(s) 693, 1123, 1265, 1427, 1942, 2192
BsmI GAATGC 1 cut(s) 1201
BsnI GGCC 3 cut(s) 79, 1729, 1756
Bsp119I TTCGAA 1 cut(s) 1525
Bsp1286I GDGCHC 5 cut(s) 287, 1148, 1944, 2173, 2441
Bsp143I GATC 9 cut(s) 868, 1050, 1418, 1837, 1844, 1897, 2293, 2568, 2617
Bsp19I CCATGG 1 cut(s) 2357
BspACI CCGC 5 cut(s) 1075, 1248, 1349, 1579, 1812
BspANI GGCC 3 cut(s) 79, 1729, 1756
BspCNI CTCAG 2 cut(s) 469, 1723
BspDI ATCGAT 2 cut(s) 1641, 2478
BspFNI CGCG 1 cut(s) 472
BspLI GGNNCC 3 cut(s) 1111, 1112, 1563
BspMAI CTGCAG 2 cut(s) 530, 1138
BspMI ACCTGC 1 cut(s) 2393
BspPI GGATC 3 cut(s) 1045, 1426, 1832
BspQI GCTCTTC 2 cut(s) 945, 1153
BspT104I TTCGAA 1 cut(s) 1525
BspTI CTTAAG 1 cut(s) 1268
BsrDI GCAATG 2 cut(s) 1860, 2230
BsrFI RCCGGY 1 cut(s) 94
BsrI ACTGG 2 cut(s) 1283, 1514
BssAI RCCGGY 1 cut(s) 94
BssECI CCNNGG 7 cut(s) 684, 718, 885, 1054, 1161, 2313, 2357
BssMI GATC 9 cut(s) 868, 1050, 1418, 1837, 1844, 1897, 2293, 2568, 2617
BssSI CACGAG 1 cut(s) 2262
BssT1I CCWWGG 1 cut(s) 2357
Bst2BI CACGAG 1 cut(s) 2262
Bst4CI ACNGT 6 cut(s) 192, 974, 1040, 1221, 1976, 2314
Bst6I CTCTTC 7 cut(s) 135, 255, 945, 1153, 1388, 2118, 2208
BstAFI CTTAAG 1 cut(s) 1268
BstAPI GCANNNNNTGC 1 cut(s) 735
BstBI TTCGAA 1 cut(s) 1525
BstC8I GCNNGC 2 cut(s) 570, 1581
BstDSI CCRYGG 4 cut(s) 684, 1054, 2313, 2357
BstENI CCTNNNNNAGG 1 cut(s) 1845
BstF5I GGATG 6 cut(s) 694, 1171, 1181, 1299, 1462, 2281
BstFNI CGCG 1 cut(s) 472
BstH2I RGCGCY 1 cut(s) 462
BstHHI GCGC 2 cut(s) 461, 1228
BstKTI GATC 9 cut(s) 871, 1053, 1421, 1840, 1847, 1900, 2296, 2571, 2620
BstMAI GTCTC 3 cut(s) 761, 2492, 2597
BstMBI GATC 9 cut(s) 868, 1050, 1418, 1837, 1844, 1897, 2293, 2568, 2617
BstMWI GCNNNNNNNGC 5 cut(s) 585, 735, 1234, 1735, 2101
BstNSI RCATGY 1 cut(s) 744
BstSCI CCNGG 2 cut(s) 1077, 1112
BstSFI CTRYAG 2 cut(s) 526, 1134
BstSLI GKGCMC 2 cut(s) 2173, 2441
BstUI CGCG 1 cut(s) 472
BstV1I GCAGC 3 cut(s) 722, 1120, 1415
BstV2I GAAGAC 2 cut(s) 952, 2547
BstX2I RGATCY 3 cut(s) 1050, 1418, 1897
BstXI CCANNNNNNTGG 1 cut(s) 1290
BstYI RGATCY 3 cut(s) 1050, 1418, 1897
Bsu15I ATCGAT 2 cut(s) 1641, 2478
BsuI GTATCC 2 cut(s) 418, 681
BsuRI GGCC 3 cut(s) 79, 1729, 1756
BsuTUI ATCGAT 2 cut(s) 1641, 2478
BtgI CCRYGG 4 cut(s) 684, 1054, 2313, 2357
BtgZI GCGATG 2 cut(s) 845, 1812
BtsCI GGATG 6 cut(s) 694, 1171, 1181, 1299, 1462, 2281
BtsI GCAGTG 3 cut(s) 124, 1792, 2394
BtsIMutI CAGTG 8 cut(s) 124, 424, 970, 1290, 1521, 1792, 1972, 2394
BveI ACCTGC 1 cut(s) 2393
Cac8I GCNNGC 2 cut(s) 570, 1581
CaiI CAGNNNCTG 1 cut(s) 1991
CfoI GCGC 2 cut(s) 461, 1228
Cfr10I RCCGGY 1 cut(s) 94
Cfr13I GGNCC 3 cut(s) 1110, 1500, 1904
ClaI ATCGAT 2 cut(s) 1641, 2478
Csp6I GTAC 2 cut(s) 514, 1102
CspAI ACCGGT 1 cut(s) 94
CviAII CATG 7 cut(s) 309, 535, 654, 741, 1124, 2291, 2358
CviQI GTAC 2 cut(s) 514, 1102
DpnI GATC 9 cut(s) 870, 1052, 1420, 1839, 1846, 1899, 2295, 2570, 2619
DpnII GATC 9 cut(s) 868, 1050, 1418, 1837, 1844, 1897, 2293, 2568, 2617
DraI TTTAAA 2 cut(s) 549, 2188
DraIII CACNNNGTG 1 cut(s) 2030
DrdI GACNNNNNNGTC 1 cut(s) 1294
DseDI GACNNNNNNGTC 1 cut(s) 1294
EaeI YGGCCR 1 cut(s) 77
Eam1104I CTCTTC 7 cut(s) 135, 255, 945, 1153, 1388, 2118, 2208
EarI CTCTTC 7 cut(s) 135, 255, 945, 1153, 1388, 2118, 2208
Ecl136II GAGCTC 3 cut(s) 285, 1146, 1942
Eco130I CCWWGG 1 cut(s) 2357
Eco24I GRGCYC 3 cut(s) 287, 1148, 1944
Eco32I GATATC 2 cut(s) 608, 694
Eco47I GGWCC 3 cut(s) 1110, 1500, 1904
Eco47III AGCGCT 1 cut(s) 460
Eco53kI GAGCTC 3 cut(s) 285, 1146, 1942
Eco57I CTGAAG 8 cut(s) 1484, 1746, 1760, 1766, 1899, 1917, 2037, 2081
EcoICRI GAGCTC 3 cut(s) 285, 1146, 1942
EcoNI CCTNNNNNAGG 1 cut(s) 1845
EcoO109I RGGNCCY 1 cut(s) 1110
EcoRI GAATTC 2 cut(s) 1851, 2240
EcoRV GATATC 2 cut(s) 608, 694
EcoT14I CCWWGG 1 cut(s) 2357
EcoT22I ATGCAT 2 cut(s) 659, 2010
EcoT38I GRGCYC 3 cut(s) 287, 1148, 1944
ErhI CCWWGG 1 cut(s) 2357
FaeI CATG 7 cut(s) 312, 538, 657, 744, 1127, 2294, 2361
FalI AAGNNNNNCTT 8 cut(s) 1262, 1294, 1461, 1493, 1872, 1904, 2532, 2564
FaqI GGGAC 6 cut(s) 693, 1123, 1265, 1427, 1942, 2192
FatI CATG 7 cut(s) 308, 534, 653, 740, 1123, 2290, 2357
FauI CCCGC 2 cut(s) 1241, 1572
FauNDI CATATG 3 cut(s) 1021, 1714, 1924
FbaI TGATCA 1 cut(s) 2293
Fnu4HI GCNGC 4 cut(s) 736, 1134, 1404, 2623
FokI GGATG 6 cut(s) 701, 1168, 1178, 1306, 1469, 2268
FriOI GRGCYC 3 cut(s) 287, 1148, 1944
Fsp4HI GCNGC 4 cut(s) 736, 1134, 1404, 2623
FspBI CTAG 7 cut(s) 368, 753, 1238, 1422, 1842, 2378, 2615
GlaI GCGC 2 cut(s) 460, 1227
GluI GCNGC 4 cut(s) 736, 1134, 1404, 2623
GsaI CCCAGC 1 cut(s) 1561
GsuI CTGGAG 1 cut(s) 1283
HaeII RGCGCY 1 cut(s) 462
HaeIII GGCC 3 cut(s) 79, 1729, 1756
HapII CCGG 3 cut(s) 95, 1079, 1114
HhaI GCGC 2 cut(s) 461, 1228
Hin1II CATG 7 cut(s) 312, 538, 657, 744, 1127, 2294, 2361
Hin6I GCGC 2 cut(s) 459, 1226
HinP1I GCGC 2 cut(s) 459, 1226
HincII GTYRAC 2 cut(s) 439, 991
HindII GTYRAC 2 cut(s) 439, 991
HindIII AAGCTT 2 cut(s) 1967, 2207
HpaI GTTAAC 1 cut(s) 439
HpaII CCGG 3 cut(s) 95, 1079, 1114
HphI GGTGA 5 cut(s) 20, 1520, 1582, 1675, 2578
Hpy166II GTNNAC 6 cut(s) 439, 684, 991, 1511, 2171, 2439
Hpy8I GTNNAC 6 cut(s) 439, 684, 991, 1511, 2171, 2439
HpyAV CCTTC 6 cut(s) 384, 1393, 1685, 1741, 1770, 1874
HpyCH4III ACNGT 6 cut(s) 192, 974, 1040, 1221, 1976, 2314
HpyF10VI GCNNNNNNNGC 5 cut(s) 585, 735, 1234, 1735, 2101
Hsp92II CATG 7 cut(s) 312, 538, 657, 744, 1127, 2294, 2361
HspAI GCGC 2 cut(s) 459, 1226
KflI GGGWCCC 1 cut(s) 1110
Ksp22I TGATCA 1 cut(s) 2293
KspAI GTTAAC 1 cut(s) 439
Kzo9I GATC 9 cut(s) 868, 1050, 1418, 1837, 1844, 1897, 2293, 2568, 2617
LguI GCTCTTC 2 cut(s) 945, 1153
LmnI GCTCC 8 cut(s) 282, 402, 1264, 1306, 1561, 2035, 2101, 2317
Lsp1109I GCAGC 3 cut(s) 722, 1120, 1415
LweI GCATC 5 cut(s) 822, 1006, 1725, 1978, 1995
MaeI CTAG 7 cut(s) 368, 753, 1238, 1422, 1842, 2378, 2615
MaeIII GTNAC 7 cut(s) 965, 1285, 1424, 1790, 1960, 2020, 2266
MalI GATC 9 cut(s) 870, 1052, 1420, 1839, 1846, 1899, 2295, 2570, 2619
MboI GATC 9 cut(s) 868, 1050, 1418, 1837, 1844, 1897, 2293, 2568, 2617
MfeI CAATTG 2 cut(s) 984, 2049
MflI RGATCY 3 cut(s) 1050, 1418, 1897
MhlI GDGCHC 5 cut(s) 287, 1148, 1944, 2173, 2441
MlsI TGGCCA 1 cut(s) 79
MluNI TGGCCA 1 cut(s) 79
MlyI GAGTC 4 cut(s) 118, 488, 943, 1247
MmeI TCCRAC 1 cut(s) 388
Mox20I TGGCCA 1 cut(s) 79
Mph1103I ATGCAT 2 cut(s) 659, 2010
MroXI GAANNNNTTC 3 cut(s) 1476, 1884, 2199
MscI TGGCCA 1 cut(s) 79
MslI CAYNNNNRTG 3 cut(s) 45, 753, 1797
Msp20I TGGCCA 1 cut(s) 79
MspA1I CMGCKG 1 cut(s) 1547
MspCI CTTAAG 1 cut(s) 1268
MspI CCGG 3 cut(s) 95, 1079, 1114
MspR9I CCNGG 2 cut(s) 1079, 1114
MunI CAATTG 2 cut(s) 984, 2049
Mva1269I GAATGC 1 cut(s) 1201
MvnI CGCG 1 cut(s) 472
MwoI GCNNNNNNNGC 5 cut(s) 585, 735, 1234, 1735, 2101
NciI CCSGG 2 cut(s) 1079, 1114
NcoI CCATGG 1 cut(s) 2357
NdeI CATATG 3 cut(s) 1021, 1714, 1924
NdeII GATC 9 cut(s) 868, 1050, 1418, 1837, 1844, 1897, 2293, 2568, 2617
NlaIII CATG 7 cut(s) 312, 538, 657, 744, 1127, 2294, 2361
NlaIV GGNNCC 3 cut(s) 1111, 1112, 1563
NmeAIII GCCGAG 1 cut(s) 743
NmuCI GTSAC 4 cut(s) 1285, 1424, 1790, 1960
NsiI ATGCAT 2 cut(s) 659, 2010
NspI RCATGY 1 cut(s) 744
NspV TTCGAA 1 cut(s) 1525
OliI CACNNNNGTG 1 cut(s) 753
PciI ACATGT 1 cut(s) 740
PciSI GCTCTTC 2 cut(s) 945, 1153
PcsI WCGNNNNNNNCGW 1 cut(s) 792
PctI GAATGC 1 cut(s) 1201
PdmI GAANNNNTTC 3 cut(s) 1476, 1884, 2199
PfeI GAWTC 8 cut(s) 31, 494, 902, 1275, 1448, 1601, 1955, 2425
PflMI CCANNNNNTGG 2 cut(s) 1191, 1901
PinAI ACCGGT 1 cut(s) 94
PkrI GCNGC 4 cut(s) 737, 1135, 1405, 2624
PleI GAGTC 4 cut(s) 117, 487, 942, 1247
PpsI GAGTC 4 cut(s) 117, 487, 942, 1247
PpuMI RGGWCCY 1 cut(s) 1110
PscI ACATGT 1 cut(s) 740
Psp124BI GAGCTC 3 cut(s) 287, 1148, 1944
Psp5II RGGWCCY 1 cut(s) 1110
PspFI CCCAGC 1 cut(s) 1557
PspN4I GGNNCC 3 cut(s) 1111, 1112, 1563
PspPI GGNCC 3 cut(s) 1110, 1500, 1904
PspPPI RGGWCCY 1 cut(s) 1110
PstI CTGCAG 2 cut(s) 530, 1138
PstNI CAGNNNCTG 1 cut(s) 1991
PsuI RGATCY 3 cut(s) 1050, 1418, 1897
PvuII CAGCTG 1 cut(s) 1547
RsaI GTAC 2 cut(s) 515, 1103
RsaNI GTAC 2 cut(s) 514, 1102
RseI CAYNNNNRTG 3 cut(s) 45, 753, 1797
SacI GAGCTC 3 cut(s) 287, 1148, 1944
SapI GCTCTTC 2 cut(s) 945, 1153
SatI GCNGC 4 cut(s) 736, 1134, 1404, 2623
Sau3AI GATC 9 cut(s) 868, 1050, 1418, 1837, 1844, 1897, 2293, 2568, 2617
Sau96I GGNCC 3 cut(s) 1110, 1500, 1904
ScaI AGTACT 1 cut(s) 515
SchI GAGTC 4 cut(s) 118, 488, 943, 1247
ScrFI CCNGG 2 cut(s) 1079, 1114
SduI GDGCHC 5 cut(s) 287, 1148, 1944, 2173, 2441
SfaNI GCATC 5 cut(s) 822, 1006, 1725, 1978, 1995
SfcI CTRYAG 2 cut(s) 526, 1134
SfuI TTCGAA 1 cut(s) 1525
SinI GGWCC 3 cut(s) 1110, 1500, 1904
SmiMI CAYNNNNRTG 3 cut(s) 45, 753, 1797
SmlI CTYRAG 6 cut(s) 35, 915, 1268, 2333, 2429, 2549
SmoI CTYRAG 6 cut(s) 35, 915, 1268, 2333, 2429, 2549
SpeI ACTAGT 1 cut(s) 367
SsiI CCGC 5 cut(s) 1075, 1248, 1349, 1579, 1812
SspI AATATT 1 cut(s) 1999
SspMI CTAG 7 cut(s) 368, 753, 1238, 1422, 1842, 2378, 2615
SstI GAGCTC 3 cut(s) 287, 1148, 1944
StyD4I CCNGG 2 cut(s) 1077, 1112
StyI CCWWGG 1 cut(s) 2357
TaaI ACNGT 6 cut(s) 192, 974, 1040, 1221, 1976, 2314
TatI WGTACW 2 cut(s) 513, 1101
TfiI GAWTC 8 cut(s) 31, 494, 902, 1275, 1448, 1601, 1955, 2425
TscAI CASTG 8 cut(s) 124, 424, 977, 1290, 1521, 1799, 1979, 2394
TseFI GTSAC 4 cut(s) 1285, 1424, 1790, 1960
TseI GCWGC 4 cut(s) 735, 1133, 1403, 2622
Tsp45I GTSAC 4 cut(s) 1285, 1424, 1790, 1960
TspGWI ACGGA 6 cut(s) 39, 199, 701, 1043, 1431, 2480
TspRI CASTG 8 cut(s) 124, 424, 977, 1290, 1521, 1799, 1979, 2394
Van91I CCANNNNNTGG 2 cut(s) 1191, 1901
Vha464I CTTAAG 1 cut(s) 1268
VneI GTGCAC 2 cut(s) 2169, 2437
VpaK11BI GGWCC 3 cut(s) 1110, 1500, 1904
XagI CCTNNNNNAGG 1 cut(s) 1845
XapI RAATTY 4 cut(s) 556, 1851, 2240, 2342
XceI RCATGY 1 cut(s) 744
XcmI CCANNNNNNNNNTGG 3 cut(s) 1052, 1188, 1572
XmnI GAANNNNTTC 3 cut(s) 1476, 1884, 2199
XspI CTAG 7 cut(s) 368, 753, 1238, 1422, 1842, 2378, 2615
ZrmI AGTACT 1 cut(s) 515
Zsp2I ATGCAT 2 cut(s) 659, 2010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.