Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0004714

Physical Location & Seq

Genomic Coordinates Forward (+)

1448607 .. 1454103

Gene Structure 5497 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000031023

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2688 bp

ATGCAAGTTCTGAGAGTGGAAGAAGGAAGGCCGGGCCAATATAGTGATGAAGATATTGGTTCTGGTAAGAGAGAATTCTCGGAGTTACTGGAGCATGAAAAGGAAGAGCTACTGCAGGACCAATCAGAAGAGGATGAGATGGACAATGGTCGCTTACAGAGGACCGGAACTAAGAAGAGACGGTTTACTTCAGAAATTGGAGCTTCAAATGGAAAAAGAATTAGAAAAAAGCAACTGGCCTCAAACTATTATGAAGATGCAGATGAGTTAATGGATGAAATGGAGCATGACACAGAAATTGCCTTTATGATCAAGTCAAAAGCACGGAGAAGGGGAAGTCCAGGCCGTGGAAAGATCAACAGGAGTTCCTCAGTGGATTCAGGAGTTAAAGATGAGTCAAAGAATACTACTTCTTATACTTCGTCTTCTTCACCACCATCTTCTCCGAATTCATCAGTTTCAGTTCTAAGATGGGATCGTGGTAGATGCACTTCAAGACACATAAAGGATAATGGAGATGTTTGTTTTAAGTGTCATCAGTGTATGCAAGAATCAAAAACTATTGTTTCTTGCTCCAAGTGTAAAAACAACTCTTATTGTATCCGTTGTATCAAGGAATGGTATCCTCACATGAAGGTACAGGAAGTCAAGGAACTTTGCCCATTTTGCCGCAGAAATTGCAACTGTAATGCTTGCCTCCACTCAACTGGCATGATTAAGACACCAAAACGGGACATAAGCGACTATGAAAAGGCTCAGCATTTGGTGCATTTAATTCGCTCCATGCTTCCATTTCTGAAGGAATTTTCTGATGAACAAAAGGAGGAGATACAGATCGAAGCTAATATTCAAGGAGAGTCGCTTTCCAACATTATAATAGAACAAACCCTCTGCTACAATGATGAGCGTGTCTATTGCAACCACTGTGCAACTTCAATTGTTGATCTGCATCGAAGTTGCCCAAAATGTCTATATGAACTCTGTCTAAGTTGTTGTAGAGAAATTAGGCAGGGATGCCTTTTAGACCGTGCAGAGGTGAAGTTTCAATATAGGAATATGGGTTGCGAGTACATTCATGGTGGAGATCCATCATCTGAATGTTGTTCCTTAGAAGCTCCAGACAATCATATTGAGCCTTTGACTGGGTGGAATGAGCCTTTGACTGGGTGGAATGCAAATGATGATAATAGTATTACTTGTGCTCCAAAGGAAATGGGTGGCTGCGGTGAGAGCAACTTGGCTCTGAAGCGAATCCTTCCTTGTGATTGGATTGCAAGTTTAGAAGCAAAAGCCAAAACTGTACTAGACATTTGTGAAACCAAATACTGTACTTTCATGCATGAATGTGGTGAAAGAAGCATTGATATGTTGCGAAAGGCAGCTTCTAGGGAGGATTCTTGTGACAACTTCTTATATTGTCCAGATTCAAGGGACACTCTGAATGAAGGAGATCTTTTGCACTTCAGAAAACATTGGATTAATGGTGAACCAGTCATAGTTCAAAATGTACTTGAACAGGCAAATGGTCTGAGCTGGGAGCCAATGGTCATGTGGCGTGCTTTAAGTGAAAATATGGATCCAAATAGTACCTCACAATTTTCAGAGGTCAAGACCATTGATTGCCTGGCTGGCTGTGAGGTGGAAATAAATACTCGGCAATTTTTTGAAGGATATACGGAAGGAAGAATGTATGGAAATTTGTGGCCAGAGATGCTTAAGCTGAAGGATTGGCCCCCTTCTGATAAGTTTGAGAATCTTTTGCCCCGACATTGTGATGAATTTATTACTGCCTTGCCATTTCAAGAGTACACAGATCCTAGAGCTGGACTTCTTAACCTTGCTGTTAAGTTGCCACCTGGAGTCTTGAAACCAGACATGGGTCCAAAAACATATATTGCTTATGGGCTTGTGGAAGAGCTTGGAAGAGGGGATTCTGTAACCAAGCTGCATTGTGATATGTCTGATGCGGTTAATATTTTGACACATACAGCAGAAATAAAGCTAGGTGATGAGCAGAAATCTGCAATTTCAATGCTAAAAGAATTACATAGAGCCCAAGATGAGAGAGAGCTTCGGAATTGGGTGAATTCTCAGTCTGGACAGTCTGGAGGGGATGAAGAAATCATAGAAAAGAATTACAATAGGGAATTGAAGGTTCCAGAAGATGATGCAGATGGGCCCACTCTTTCTGGTTCTCCCTGCACGGAAGCAGTAGAGGAAACCGGTGGTGCTTTGTGGGACATTTTCCGCAGGGAAGATGTCCCTAAGTTGGAGGCTTATCTGAAGAAGCACTATAAAGAATTCAGGCACACTTATTGTTCATTAGTTGAACGGGTTATTCATCCAATTCATGATCAGTCCTTTTATTTGACAATGGATCACAAAAGGAAGCTTAAGGAAGAATTTGGAGTCGAACCATGGACATTTGTACAAAGCCTTGGAGAGGCTGTATTTATACCTGCTGGATGCCCACACCAAGTTAGGAATCTCAAGTCTTGTACAAAAGTAGCTGTAGACTTTGTATCCCCAGAAAATGTCCATGAGTGCCTCCGTTTAACCAAGGACTTCAGACAGCTTCCCAAGAATCATAGAGCTAGAGAGGACAAACTTGAGATAAAGAAAATGATACTATATGCGGTCGACCAAGCTGTTAAAGATTTGGAAGCCTTGGTAGCAACTCAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

JmjC zf-4CXXC_R1

Protein Analysis

896

Amino Acids

102.24

Weight (kDa)

5.52

Isoelectric Point (pI)

55.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC	PF02373	726 - 840	8.9e-15	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0004714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11950 AT1G11950 AT1G11950 AT1G62310
fragaria_vesca	FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550
malus_domestica	MD05G1351300.v1.1 MD10G1325700.v1.1
prunus_persica	Prupe.4G016300_v2.0.a1
pyrus_communis	pycom05g31840 pycom10g27540
rosa_chinensis	RchiOBHm_Chr5g0002371
rosa_laevigata	RLG00000031023
rosa_multiflora	Rmu_co8351855.1_g000001 Rmu_co8445921.1_g000001 Rmu_sc0006137.1_g000004 Rmu_sc0006137.1_g000005 Rmu_sc0017945.1_g000004
rosa_rugosa	Rorug04G0395600 Rorug04G0395700.1
rosa_samantha	Rh5AG018400 Rh5BG021100 Rh5CG020300 Rh5DG019300
rosa_wichuraiana	Rw5G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	875
Acc36I	ACCTGC	1 cut(s)	2467
AccB7I	CCANNNNNTGG	1 cut(s)	347
AccI	GTMKAC	2 cut(s)	2514, 2640
AciI	CCGC	5 cut(s)	670, 1224, 1967, 2248, 2636
AclWI	GGATC	6 cut(s)	483, 1079, 1571, 1584, 1808, 2385
AcoI	YGGCCR	1 cut(s)	1703
AcsI	RAATTY	8 cut(s)	74, 448, 803, 1696, 1778, 2086, 2300, 2402
AcuI	CTGAAG	7 cut(s)	174, 818, 1265, 1447, 1742, 2303, 2551
AfaI	GTAC	9 cut(s)	639, 1070, 1302, 1330, 1509, 1588, 1808, 2430, 2500
AfiI	CCNNNNNNNGG	8 cut(s)	347, 1033, 1142, 1163, 1823, 1877, 2269, 2443
AflII	CTTAAG	2 cut(s)	1715, 2393
AgeI	ACCGGT	1 cut(s)	2222
AjnI	CCWGG	3 cut(s)	340, 1623, 1855
Alw21I	GWGCWC	1 cut(s)	1204
Alw26I	GTCTC	1 cut(s)	172
AlwI	GGATC	6 cut(s)	483, 1079, 1571, 1584, 1808, 2385
AoxI	GGCC	7 cut(s)	29, 34, 237, 343, 1703, 1730, 2177
ApaI	GGGCCC	1 cut(s)	2181
ApeKI	GCWGC	3 cut(s)	1221, 1379, 1945
ApoI	RAATTY	8 cut(s)	74, 448, 803, 1696, 1778, 2086, 2300, 2402
AseI	ATTAAT	1 cut(s)	1479
AsiGI	ACCGGT	1 cut(s)	2222
AspS9I	GGNCC	7 cut(s)	34, 118, 162, 1731, 1880, 2177, 2178
AsuC2I	CCSGG	1 cut(s)	33
AsuHPI	GGTGA	7 cut(s)	423, 1048, 1238, 1361, 1496, 2018, 2095
AvaII	GGWCC	3 cut(s)	118, 162, 1880
BaeGI	GKGCMC	1 cut(s)	2181
BalI	TGGCCA	1 cut(s)	1705
BamHI	GGATCC	1 cut(s)	1576
BanII	GRGCYC	2 cut(s)	2056, 2181
BarI	GAAGNNNNNNTAC	2 cut(s)	475, 507
BbsI	GAAGAC	1 cut(s)	417
Bbv12I	GWGCWC	1 cut(s)	1204
BbvI	GCAGC	3 cut(s)	1208, 1391, 1932
BccI	CCATC	5 cut(s)	133, 445, 465, 1096, 2168
BceAI	ACGGC	1 cut(s)	330
BcgI	CGANNNNNNTGC	2 cut(s)	758, 792
BciT130I	CCWGG	3 cut(s)	342, 1625, 1857
BciVI	GTATCC	3 cut(s)	611, 633, 2533
BclI	TGATCA	2 cut(s)	309, 2353
BcnI	CCSGG	1 cut(s)	33
BcoDI	GTCTC	1 cut(s)	172
BfaI	CTAG	5 cut(s)	1304, 1386, 1818, 2003, 2595
BfmI	CTRYAG	2 cut(s)	113, 2511
BfrI	CTTAAG	2 cut(s)	1715, 2393
BfuAI	ACCTGC	1 cut(s)	2467
BfuI	GTATCC	3 cut(s)	611, 633, 2533
BglI	GCCNNNNNGGC	1 cut(s)	1629
BglII	AGATCT	1 cut(s)	1450
BisI	GCNGC	4 cut(s)	670, 1222, 1380, 1946
BlpI	GCTNAGC	1 cut(s)	756
BlsI	GCNGC	4 cut(s)	671, 1223, 1381, 1947
Bme1390I	CCNGG	4 cut(s)	33, 342, 1625, 1857
Bme18I	GGWCC	3 cut(s)	118, 162, 1880
BmgT120I	GGNCC	7 cut(s)	34, 118, 162, 1731, 1880, 2177, 2178
BmiI	GGNNCC	6 cut(s)	1539, 1578, 1733, 1881, 2157, 2179
BmrFI	CCNGG	4 cut(s)	33, 342, 1625, 1857
BmrI	ACTGGG	2 cut(s)	1152, 1173
BmsI	GCATC	8 cut(s)	247, 476, 958, 1004, 1701, 1954, 2158, 2456
BmuI	ACTGGG	2 cut(s)	1152, 1173
BoxI	GACNNNNGTC	2 cut(s)	147, 1878
BpiI	GAAGAC	1 cut(s)	417
BpmI	CTGGAG	4 cut(s)	110, 1101, 1878, 2127
Bpu1102I	GCTNAGC	1 cut(s)	756
BpuEI	CTTGAG	3 cut(s)	2474, 2630, 2664
BpuMI	CCSGG	1 cut(s)	33
BsaBI	GATNNNNATC	2 cut(s)	833, 948
BsaJI	CCNNGG	5 cut(s)	346, 2417, 2437, 2559, 2667
BsaWI	WCCGGW	2 cut(s)	164, 2222
BsaXI	ACNNNNNCTCC	4 cut(s)	1186, 1216, 2433, 2463
Bsc4I	CCNNNNNNNGG	8 cut(s)	347, 1033, 1142, 1163, 1823, 1877, 2269, 2443
Bse118I	RCCGGY	1 cut(s)	2222
Bse1I	ACTGG	6 cut(s)	93, 240, 712, 1147, 1168, 1490
Bse8I	GATNNNNATC	2 cut(s)	833, 948
BseBI	CCWGG	3 cut(s)	342, 1625, 1857
BseDI	CCNNGG	5 cut(s)	346, 2417, 2437, 2559, 2667
BseGI	GGATG	6 cut(s)	139, 280, 1019, 2119, 2341, 2471
BseJI	GATNNNNATC	2 cut(s)	833, 948
BseLI	CCNNNNNNNGG	8 cut(s)	347, 1033, 1142, 1163, 1823, 1877, 2269, 2443
BseMII	CTCAG	4 cut(s)	384, 770, 1520, 2105
BseNI	ACTGG	6 cut(s)	93, 240, 712, 1147, 1168, 1490
BseRI	GAGGAG	1 cut(s)	839
BseSI	GKGCMC	1 cut(s)	2181
BseXI	GCAGC	3 cut(s)	1208, 1391, 1932
BseYI	CCCAGC	1 cut(s)	1533
BsgI	GTGCAG	2 cut(s)	1050, 2185
Bsh1285I	CGRYCG	1 cut(s)	2640
BshFI	GGCC	7 cut(s)	31, 36, 239, 345, 1705, 1732, 2179
BshTI	ACCGGT	1 cut(s)	2222
BsiEI	CGRYCG	1 cut(s)	2640
BsiHKAI	GWGCWC	1 cut(s)	1204
BsiSI	CCGG	3 cut(s)	32, 165, 2223
BslFI	GGGAC	4 cut(s)	746, 1445, 2246, 2252
BslI	CCNNNNNNNGG	8 cut(s)	347, 1033, 1142, 1163, 1823, 1877, 2269, 2443
BsmAI	GTCTC	1 cut(s)	172
BsmBI	CGTCTC	1 cut(s)	172
BsmFI	GGGAC	4 cut(s)	746, 1445, 2246, 2252
BsmI	GAATGC	1 cut(s)	1177
BsnI	GGCC	7 cut(s)	31, 36, 239, 345, 1705, 1732, 2179
Bsp120I	GGGCCC	1 cut(s)	2177
Bsp1286I	GDGCHC	3 cut(s)	1204, 2056, 2181
Bsp1407I	TGTACA	2 cut(s)	2428, 2498
Bsp1720I	GCTNAGC	1 cut(s)	756
Bsp19I	CCATGG	1 cut(s)	2417
BspACI	CCGC	5 cut(s)	670, 1224, 1967, 2248, 2636
BspANI	GGCC	7 cut(s)	31, 36, 239, 345, 1705, 1732, 2179
BspCNI	CTCAG	4 cut(s)	383, 769, 1521, 2104
BspHI	TCATGA	1 cut(s)	2350
BspLI	GGNNCC	6 cut(s)	1539, 1578, 1733, 1881, 2157, 2179
BspMAI	CTGCAG	1 cut(s)	117
BspMI	ACCTGC	1 cut(s)	2467
BspPI	GGATC	6 cut(s)	483, 1079, 1571, 1584, 1808, 2385
BspQI	GCTCTTC	2 cut(s)	99, 1908
BspTI	CTTAAG	2 cut(s)	1715, 2393
BsrFI	RCCGGY	1 cut(s)	2222
BsrGI	TGTACA	2 cut(s)	2428, 2498
BsrI	ACTGG	6 cut(s)	93, 240, 712, 1147, 1168, 1490
BssAI	RCCGGY	1 cut(s)	2222
BssECI	CCNNGG	5 cut(s)	346, 2417, 2437, 2559, 2667
BssT1I	CCWWGG	4 cut(s)	2417, 2437, 2559, 2667
Bst2UI	CCWGG	3 cut(s)	342, 1625, 1857
Bst4CI	ACNGT	7 cut(s)	183, 686, 926, 1028, 1300, 1328, 2103
Bst6I	CTCTTC	5 cut(s)	99, 123, 170, 1908, 1918
BstAFI	CTTAAG	2 cut(s)	1715, 2393
BstAPI	GCANNNNNTGC	2 cut(s)	678, 766
BstAUI	TGTACA	2 cut(s)	2428, 2498
BstC8I	GCNNGC	3 cut(s)	694, 1557, 1630
BstDSI	CCRYGG	2 cut(s)	346, 2417
BstENI	CCTNNNNNAGG	1 cut(s)	2441
BstF5I	GGATG	6 cut(s)	139, 280, 1019, 2119, 2341, 2471
BstMAI	GTCTC	1 cut(s)	172
BstMCI	CGRYCG	1 cut(s)	2640
BstMWI	GCNNNNNNNGC	7 cut(s)	666, 678, 766, 1230, 1629, 1711, 2672
BstNI	CCWGG	3 cut(s)	342, 1625, 1857
BstPAI	GACNNNNGTC	2 cut(s)	147, 1878
BstSCI	CCNGG	4 cut(s)	31, 340, 1623, 1855
BstSFI	CTRYAG	2 cut(s)	113, 2511
BstSLI	GKGCMC	1 cut(s)	2181
BstV1I	GCAGC	3 cut(s)	1208, 1391, 1932
BstV2I	GAAGAC	1 cut(s)	417
BstX2I	RGATCY	4 cut(s)	1084, 1450, 1576, 1813
BstXI	CCANNNNNNTGG	1 cut(s)	707
BstYI	RGATCY	4 cut(s)	1084, 1450, 1576, 1813
BsuI	GTATCC	3 cut(s)	611, 633, 2533
BsuRI	GGCC	7 cut(s)	31, 36, 239, 345, 1705, 1732, 2179
BtgI	CCRYGG	2 cut(s)	346, 2417
BtsCI	GGATG	6 cut(s)	139, 280, 1019, 2119, 2341, 2471
BtsIMutI	CAGTG	3 cut(s)	378, 545, 922
BveI	ACCTGC	1 cut(s)	2467
Cac8I	GCNNGC	3 cut(s)	694, 1557, 1630
CciI	TCATGA	1 cut(s)	2350
Cfr10I	RCCGGY	1 cut(s)	2222
Cfr13I	GGNCC	7 cut(s)	34, 118, 162, 1731, 1880, 2177, 2178
Csp6I	GTAC	9 cut(s)	638, 1069, 1301, 1329, 1508, 1587, 1807, 2429, 2499
CspAI	ACCGGT	1 cut(s)	2222
CviQI	GTAC	9 cut(s)	638, 1069, 1301, 1329, 1508, 1587, 1807, 2429, 2499
EaeI	YGGCCR	1 cut(s)	1703
Eam1104I	CTCTTC	5 cut(s)	99, 123, 170, 1908, 1918
EarI	CTCTTC	5 cut(s)	99, 123, 170, 1908, 1918
Eco130I	CCWWGG	4 cut(s)	2417, 2437, 2559, 2667
Eco24I	GRGCYC	2 cut(s)	2056, 2181
Eco47I	GGWCC	3 cut(s)	118, 162, 1880
Eco57I	CTGAAG	7 cut(s)	174, 818, 1265, 1447, 1742, 2303, 2551
EcoNI	CCTNNNNNAGG	1 cut(s)	2441
EcoRI	GAATTC	4 cut(s)	74, 448, 2086, 2300
EcoRII	CCWGG	3 cut(s)	340, 1623, 1855
EcoT14I	CCWWGG	4 cut(s)	2417, 2437, 2559, 2667
EcoT22I	ATGCAT	1 cut(s)	1341
EcoT38I	GRGCYC	2 cut(s)	2056, 2181
ErhI	CCWWGG	4 cut(s)	2417, 2437, 2559, 2667
Esp3I	CGTCTC	1 cut(s)	172
FalI	AAGNNNNNCTT	2 cut(s)	1437, 1469
FaqI	GGGAC	4 cut(s)	746, 1445, 2246, 2252
FbaI	TGATCA	2 cut(s)	309, 2353
FblI	GTMKAC	2 cut(s)	2514, 2640
Fnu4HI	GCNGC	4 cut(s)	670, 1222, 1380, 1946
FokI	GGATG	6 cut(s)	146, 287, 1026, 2126, 2328, 2478
FriOI	GRGCYC	2 cut(s)	2056, 2181
Fsp4HI	GCNGC	4 cut(s)	670, 1222, 1380, 1946
FspBI	CTAG	5 cut(s)	1304, 1386, 1818, 2003, 2595
GluI	GCNGC	4 cut(s)	670, 1222, 1380, 1946
GsaI	CCCAGC	1 cut(s)	1537
GsuI	CTGGAG	4 cut(s)	110, 1101, 1878, 2127
HaeIII	GGCC	7 cut(s)	31, 36, 239, 345, 1705, 1732, 2179
HapII	CCGG	3 cut(s)	32, 165, 2223
HincII	GTYRAC	1 cut(s)	2641
HindII	GTYRAC	1 cut(s)	2641
HindIII	AAGCTT	1 cut(s)	2390
HpaII	CCGG	3 cut(s)	32, 165, 2223
HphI	GGTGA	7 cut(s)	423, 1048, 1238, 1361, 1496, 2018, 2095
Hpy166II	GTNNAC	5 cut(s)	186, 1487, 1809, 2515, 2641
Hpy8I	GTNNAC	5 cut(s)	186, 1487, 1809, 2515, 2641
HpyCH4III	ACNGT	7 cut(s)	183, 686, 926, 1028, 1300, 1328, 2103
HpyF10VI	GCNNNNNNNGC	7 cut(s)	666, 678, 766, 1230, 1629, 1711, 2672
Ksp22I	TGATCA	2 cut(s)	309, 2353
LguI	GCTCTTC	2 cut(s)	99, 1908
LmnI	GCTCC	8 cut(s)	91, 200, 283, 578, 785, 1120, 1207, 1537
Lsp1109I	GCAGC	3 cut(s)	1208, 1391, 1932
LweI	GCATC	8 cut(s)	247, 476, 958, 1004, 1701, 1954, 2158, 2456
MaeI	CTAG	5 cut(s)	1304, 1386, 1818, 2003, 2595
MaeIII	GTNAC	3 cut(s)	84, 1400, 1936
MfeI	CAATTG	1 cut(s)	936
MflI	RGATCY	4 cut(s)	1084, 1450, 1576, 1813
MhlI	GDGCHC	3 cut(s)	1204, 2056, 2181
MlsI	TGGCCA	1 cut(s)	1705
MluNI	TGGCCA	1 cut(s)	1705
MlyI	GAGTC	4 cut(s)	404, 866, 1869, 2418
MmeI	TCCRAC	2 cut(s)	891, 2250
Mox20I	TGGCCA	1 cut(s)	1705
Mph1103I	ATGCAT	1 cut(s)	1341
MscI	TGGCCA	1 cut(s)	1705
MslI	CAYNNNNRTG	4 cut(s)	1096, 1344, 1364, 1773
Msp20I	TGGCCA	1 cut(s)	1705
MspCI	CTTAAG	2 cut(s)	1715, 2393
MspI	CCGG	3 cut(s)	32, 165, 2223
MspR9I	CCNGG	4 cut(s)	33, 342, 1625, 1857
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	1 cut(s)	1177
MvaI	CCWGG	3 cut(s)	342, 1625, 1857
MwoI	GCNNNNNNNGC	7 cut(s)	666, 678, 766, 1230, 1629, 1711, 2672
NciI	CCSGG	1 cut(s)	33
NcoI	CCATGG	1 cut(s)	2417
NlaIV	GGNNCC	6 cut(s)	1539, 1578, 1733, 1881, 2157, 2179
NmeAIII	GCCGAG	1 cut(s)	1633
NmuCI	GTSAC	1 cut(s)	1400
NsiI	ATGCAT	1 cut(s)	1341
PagI	TCATGA	1 cut(s)	2350
PciSI	GCTCTTC	2 cut(s)	99, 1908
PctI	GAATGC	1 cut(s)	1177
PfeI	GAWTC	9 cut(s)	377, 551, 1251, 1394, 1424, 1753, 1931, 2485, 2584
PflMI	CCANNNNNTGG	1 cut(s)	347
PinAI	ACCGGT	1 cut(s)	2222
PkrI	GCNGC	4 cut(s)	671, 1223, 1381, 1947
PleI	GAGTC	4 cut(s)	403, 865, 1868, 2417
PpsI	GAGTC	4 cut(s)	403, 865, 1868, 2417
PshAI	GACNNNNGTC	2 cut(s)	147, 1878
PshBI	ATTAAT	1 cut(s)	1479
PsiI	TTATAA	1 cut(s)	875
Psp6I	CCWGG	3 cut(s)	340, 1623, 1855
PspFI	CCCAGC	1 cut(s)	1533
PspGI	CCWGG	3 cut(s)	340, 1623, 1855
PspN4I	GGNNCC	6 cut(s)	1539, 1578, 1733, 1881, 2157, 2179
PspOMI	GGGCCC	1 cut(s)	2177
PspPI	GGNCC	7 cut(s)	34, 118, 162, 1731, 1880, 2177, 2178
PstI	CTGCAG	1 cut(s)	117
PsuI	RGATCY	4 cut(s)	1084, 1450, 1576, 1813
RsaI	GTAC	9 cut(s)	639, 1070, 1302, 1330, 1509, 1588, 1808, 2430, 2500
RsaNI	GTAC	9 cut(s)	638, 1069, 1301, 1329, 1508, 1587, 1807, 2429, 2499
RseI	CAYNNNNRTG	4 cut(s)	1096, 1344, 1364, 1773
SalI	GTCGAC	1 cut(s)	2639
SapI	GCTCTTC	2 cut(s)	99, 1908
SatI	GCNGC	4 cut(s)	670, 1222, 1380, 1946
Sau96I	GGNCC	7 cut(s)	34, 118, 162, 1731, 1880, 2177, 2178
SchI	GAGTC	4 cut(s)	404, 866, 1869, 2418
ScrFI	CCNGG	4 cut(s)	33, 342, 1625, 1857
SduI	GDGCHC	3 cut(s)	1204, 2056, 2181
SfaNI	GCATC	8 cut(s)	247, 476, 958, 1004, 1701, 1954, 2158, 2456
SfcI	CTRYAG	2 cut(s)	113, 2511
SinI	GGWCC	3 cut(s)	118, 162, 1880
SmiMI	CAYNNNNRTG	4 cut(s)	1096, 1344, 1364, 1773
SmlI	CTYRAG	5 cut(s)	1715, 2393, 2489, 2609, 2679
SmoI	CTYRAG	5 cut(s)	1715, 2393, 2489, 2609, 2679
SsiI	CCGC	5 cut(s)	670, 1224, 1967, 2248, 2636
SspI	AATATT	2 cut(s)	847, 1975
SspMI	CTAG	5 cut(s)	1304, 1386, 1818, 2003, 2595
StyD4I	CCNGG	4 cut(s)	31, 340, 1623, 1855
StyI	CCWWGG	4 cut(s)	2417, 2437, 2559, 2667
TaaI	ACNGT	7 cut(s)	183, 686, 926, 1028, 1300, 1328, 2103
TaqI	TCGA	4 cut(s)	837, 952, 2412, 2640
TatI	WGTACW	7 cut(s)	1068, 1300, 1328, 1507, 1806, 2428, 2498
TauI	GCSGC	1 cut(s)	672
TfiI	GAWTC	9 cut(s)	377, 551, 1251, 1394, 1424, 1753, 1931, 2485, 2584
TscAI	CASTG	3 cut(s)	378, 545, 929
TseFI	GTSAC	1 cut(s)	1400
TseI	GCWGC	3 cut(s)	1221, 1379, 1945
Tsp45I	GTSAC	1 cut(s)	1400
TspGWI	ACGGA	5 cut(s)	340, 593, 1691, 2219, 2540
TspRI	CASTG	3 cut(s)	378, 545, 929
Van91I	CCANNNNNTGG	1 cut(s)	347
Vha464I	CTTAAG	2 cut(s)	1715, 2393
VpaK11BI	GGWCC	3 cut(s)	118, 162, 1880
VspI	ATTAAT	1 cut(s)	1479
XagI	CCTNNNNNAGG	1 cut(s)	2441
XapI	RAATTY	8 cut(s)	74, 448, 803, 1696, 1778, 2086, 2300, 2402
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1548, 1621
XmiI	GTMKAC	2 cut(s)	2514, 2640
XspI	CTAG	5 cut(s)	1304, 1386, 1818, 2003, 2595
Zsp2I	ATGCAT	1 cut(s)	1341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.