Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0004714

Physical Location & Seq

Genomic Coordinates Forward (+)

1319290 .. 1324372

Gene Structure 5083 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG020300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2703 bp

ATGCAAGTTCTGAGAGTGGAAGAAGGAAGGCCGGGCCAATATAGTGATAGAGACATTGGTTCCGGCACGAGAGAATTCTCGGAGTTACTGGAGCATGAAAAGGAGGAGCTACTGCAGGACCAATCAGAAGAGGATGAGAAGGACAATGGTCGCTTACAGGGGACCGGAACTAAGAAGAGGCGGTTTACTCCAGAAATTGGAGCTTCAAATGGAAAAAGAATTAGAAAAAAGCAACTTGCCTCAAACTATTATGAAGATGCAGATGAGTTAATGGATGAAATGGAGCATGACACAGAAATTGCCTTTATGATCAAGTCAAAAGCACGGAGAAGGGGAAGTCCTGGCCGTGGAAAGATCAACAGGAGTTGCTCAGTGGATTCAGGAGTTAAAGATGAGTCAAAGAATGCTACTTCTTATACTTCGTCTTCTTCACCACCATCTTCTCCGAATTCATCAGTTTCAGTTCTAAGATGGGATCGTGGTAGATGCACTTCAAGACACATGAAGCAGGATAATGGAGATGTTTGTTTTAAGTGTCATCAGTGTATGCAAGAATCAAAAACTATTGTTTCTTGCTCCAAGTGTGAAAACAACTCTTATTGTATCCGTTGTATCAAGGAATGGTATCCTCACATGAAGGTACAGGATGTCAAGGAACTTTGCCCATTTTGCCGCAGAAATTGCAACTGTAATGCTTGCCTCCACTCAACTGGCATGATTAAGACACCAAAACGGGACATAAGCGACTATGAAAAGGCTCAGCATTTGGCGCATTTAATTCGCTCCATGCTTCCATTTCTGAAGGAATTTTCTGATGAACAAAAGGAGGAGATACAGATTGAAGCTAATATTCAAGGAGAGTCGCTTTCCAACATTATAATAGAACAAACCCTCTGTTACAATGATGAGCGTGTCTATTGCAACCACTGTGCAACTTCAATTGTTGATCTGCATCGAAGCTGCCCTAAATGTCTATATGAACTATGTCTAAGTTGTTGTAGAGAAATTAGGCAGGGATGCCTTTTAGACCGTGCAGAGGTGAAGTTTCAATATAGGAATATGGGTTGCGAGTACATTCATGGTGGAGATCCATCACCTGAATGTTGTTCCTTAGAAGCTCCAGACAATCATATTGAGCCTTTGACTGGGTGGAATGAGCCTTTGACTGGGTGGAGTGCAAATGATGATAATAGTATTACTTGTGCTCCAAAGGAAATGGGTGGCTGCGGTGAGAGCAACTTGGCTCTGAAGCGAATCCTTCCTTGTGATTGGATTGCAAGTTTAGAAGCAAAAGCCAAAACTGTACTAGACATTTGCGAAACCAAATACTGTACCTTCAAGCATGAATGTGGTGAAAGAAGAATTGATATGTTGCGAAAGGCAGCTTCTAGGGTGGATTCTTGTGACAACTCTTTATATTGTCCAGATTCAAGGGACACTCTGAAAGAAGGAGATCTTTTGCACTTCAGAAAACATTGGATTAATGGTGAACCAGTCATAGTTCAAAATGTACTTGAACAGGCAAATGGTCTGAGCTGGGAGCCAATGGTCATGTGGCGTGCTTTAAGTGAAAATATGGATCCAAATAGTACCTCACAATTTTCAGAGGTCAAGACCATTGATTGCCTGGCTGGCTGTGAGGTGGAAATAAATACTCGGCAATTTTTTGAAGGATATACGGAAGGAAGAATGTATGGAAATTTGTGGCCAGAGATGCTTAAGCTGAAGGATTGGCCCCCTTCTGATAAGTTTGAGAATCTTTTGCCCCGACATTGTGATGAATTTATTACTGCCTTGCCATTTCAAGAGTACACAGATCCTAGAGCTGGACTTCTTAACCTTGCTGTTAAGTTGCCACCTGGAGTCTTGAAACCAGACATGGGTCCAAAAACATATATTGCTTACGGGCTTGTGGAAGAGCTTGGAAGAGGGGATTCCGTAACCAAGCTGCATTGTGATATGTCTGATGCGGTTAATATTTTGACACATACAGCAGAAATAAAGCTAGGTGATGAGCAGAAATCGGCAATTTCAATGCTAAAAGAATTACATAGAGCCCAAGATGAGAGAGAGCTTCAGAATTGGGTGAATTCTCAGTCTGGACAGTCTGGAGCACAGATAGGGAATGGTGAAGAAATCATAGAAAAGAATTACAATAGGGAATTGAAGGTTCCAGAAGATGATGCAGATGGGCCCACACTTTCTGGTTCTCCCTGCACGGAAGCAGTAGAGGAAACCGGTGGTGCTTTATGGGACATTTTCCGCAGGGAAGATGTCCCTAAGTTGGAGGCTTATCTGAAGAAGCACTATAAAGAATTCAGGCACACTTACTGTTCGTTAGTTGAACGAGTTATTCATCCAATTCATGATCAATCCTTTTATTTGACAATGGATCACAAAAGGAAGCTTAAGGAAGAATTTGGAGTCGAACCATGGACATTTGTACAAAGCCTTGGAGAGGCTGTATTTATACCTGCTGGATGCCCACACCAAGTTAGGAATCTCAAGTCTTGTACAAAAGTAGCTGTAGACTTTGTATCCCCAGAAAATGTCCATGAGTGCCTCCGTTTAACTAAGGACTTCAGACAGCTTCCGAAGAATCATAGAGCTAGAGAGGACAAACTTGAGATAAAGAAAATGATACTATATGCGGTCGACCAAGCTGTTAAGGATTTGGAAGCCTTGGTAGCAACTCAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

JmjC zf-4CXXC_R1

Protein Analysis

900

Amino Acids

102.56

Weight (kDa)

5.61

Isoelectric Point (pI)

52.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC	PF02373	731 - 845	8.9e-15	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11950 AT1G11950 AT1G11950 AT1G62310
fragaria_vesca	FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550
malus_domestica	MD05G1351300.v1.1 MD10G1325700.v1.1
prunus_persica	Prupe.4G016300_v2.0.a1
pyrus_communis	pycom05g31840 pycom10g27540
rosa_chinensis	RchiOBHm_Chr5g0002371
rosa_laevigata	RLG00000031023
rosa_multiflora	Rmu_co8351855.1_g000001 Rmu_co8445921.1_g000001 Rmu_sc0006137.1_g000004 Rmu_sc0006137.1_g000005 Rmu_sc0017945.1_g000004
rosa_rugosa	Rorug04G0395600 Rorug04G0395700.1
rosa_samantha	Rh5AG018400 Rh5BG021100 Rh5CG020300 Rh5DG019300
rosa_wichuraiana	Rw5G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	878
Acc36I	ACCTGC	1 cut(s)	2482
AccB7I	CCANNNNNTGG	1 cut(s)	197
AccI	GTMKAC	2 cut(s)	2529, 2655
AciI	CCGC	6 cut(s)	181, 673, 1227, 1970, 2263, 2651
AclWI	GGATC	6 cut(s)	483, 1082, 1574, 1587, 1811, 2400
AcoI	YGGCCR	2 cut(s)	343, 1706
AcsI	RAATTY	8 cut(s)	74, 448, 806, 1699, 1781, 2089, 2315, 2417
AcuI	CTGAAG	7 cut(s)	821, 1268, 1450, 1745, 2060, 2318, 2566
AfaI	GTAC	9 cut(s)	642, 1073, 1305, 1333, 1512, 1591, 1811, 2445, 2515
AfiI	CCNNNNNNNGG	9 cut(s)	197, 347, 1036, 1145, 1166, 1826, 1880, 2284, 2458
AflII	CTTAAG	2 cut(s)	1718, 2408
AgeI	ACCGGT	1 cut(s)	2237
AjnI	CCWGG	3 cut(s)	340, 1626, 1858
Alw21I	GWGCWC	2 cut(s)	1207, 2116
Alw26I	GTCTC	1 cut(s)	45
AlwI	GGATC	6 cut(s)	483, 1082, 1574, 1587, 1811, 2400
AoxI	GGCC	6 cut(s)	29, 34, 343, 1706, 1733, 2192
ApaI	GGGCCC	1 cut(s)	2196
ApeKI	GCWGC	4 cut(s)	960, 1224, 1382, 1948
ApoI	RAATTY	8 cut(s)	74, 448, 806, 1699, 1781, 2089, 2315, 2417
AseI	ATTAAT	1 cut(s)	1482
AsiGI	ACCGGT	1 cut(s)	2237
AspLEI	GCGC	1 cut(s)	772
AspS9I	GGNCC	7 cut(s)	34, 118, 162, 1734, 1883, 2192, 2193
AsuC2I	CCSGG	1 cut(s)	33
AsuHPI	GGTGA	9 cut(s)	423, 1051, 1086, 1241, 1364, 1499, 2021, 2098, 2141
AvaII	GGWCC	3 cut(s)	118, 162, 1883
BaeGI	GKGCMC	1 cut(s)	2196
BalI	TGGCCA	1 cut(s)	1708
BamHI	GGATCC	1 cut(s)	1579
BanII	GRGCYC	2 cut(s)	2059, 2196
BarI	GAAGNNNNNNTAC	2 cut(s)	475, 507
BauI	CACGAG	1 cut(s)	67
BbsI	GAAGAC	1 cut(s)	417
Bbv12I	GWGCWC	2 cut(s)	1207, 2116
BbvI	GCAGC	4 cut(s)	947, 1211, 1394, 1935
BccI	CCATC	4 cut(s)	445, 465, 1099, 2183
BceAI	ACGGC	1 cut(s)	330
BcgI	CGANNNNNNTGC	2 cut(s)	761, 795
BciT130I	CCWGG	3 cut(s)	342, 1628, 1860
BciVI	GTATCC	3 cut(s)	614, 636, 2548
BclI	TGATCA	2 cut(s)	309, 2368
BcnI	CCSGG	1 cut(s)	33
BcoDI	GTCTC	1 cut(s)	45
BfaI	CTAG	5 cut(s)	1307, 1389, 1821, 2006, 2610
BfmI	CTRYAG	2 cut(s)	113, 2526
BfrI	CTTAAG	2 cut(s)	1718, 2408
BfuAI	ACCTGC	1 cut(s)	2482
BfuI	GTATCC	3 cut(s)	614, 636, 2548
BglI	GCCNNNNNGGC	1 cut(s)	1632
BglII	AGATCT	1 cut(s)	1453
BisI	GCNGC	5 cut(s)	673, 961, 1225, 1383, 1949
BlpI	GCTNAGC	1 cut(s)	759
BlsI	GCNGC	5 cut(s)	674, 962, 1226, 1384, 1950
Bme1390I	CCNGG	4 cut(s)	33, 342, 1628, 1860
Bme18I	GGWCC	3 cut(s)	118, 162, 1883
BmgT120I	GGNCC	7 cut(s)	34, 118, 162, 1734, 1883, 2192, 2193
BmiI	GGNNCC	8 cut(s)	61, 163, 1542, 1581, 1736, 1884, 2172, 2194
BmrFI	CCNGG	4 cut(s)	33, 342, 1628, 1860
BmrI	ACTGGG	2 cut(s)	1155, 1176
BmsI	GCATC	8 cut(s)	247, 476, 961, 1007, 1704, 1957, 2173, 2471
BmuI	ACTGGG	2 cut(s)	1155, 1176
BoxI	GACNNNNGTC	2 cut(s)	147, 1881
BpiI	GAAGAC	1 cut(s)	417
BpmI	CTGGAG	5 cut(s)	110, 174, 1104, 1881, 2130
Bpu1102I	GCTNAGC	1 cut(s)	759
BpuEI	CTTGAG	3 cut(s)	2489, 2645, 2679
BpuMI	CCSGG	1 cut(s)	33
BsaBI	GATNNNNATC	1 cut(s)	951
BsaJI	CCNNGG	4 cut(s)	346, 2432, 2452, 2682
BsaWI	WCCGGW	2 cut(s)	164, 2237
BsaXI	ACNNNNNCTCC	4 cut(s)	1189, 1219, 2448, 2478
Bsc4I	CCNNNNNNNGG	9 cut(s)	197, 347, 1036, 1145, 1166, 1826, 1880, 2284, 2458
Bse118I	RCCGGY	1 cut(s)	2237
Bse1I	ACTGG	5 cut(s)	93, 715, 1150, 1171, 1493
Bse8I	GATNNNNATC	1 cut(s)	951
BseBI	CCWGG	3 cut(s)	342, 1628, 1860
BseDI	CCNNGG	4 cut(s)	346, 2432, 2452, 2682
BseGI	GGATG	6 cut(s)	139, 280, 652, 1022, 2356, 2486
BseJI	GATNNNNATC	1 cut(s)	951
BseLI	CCNNNNNNNGG	9 cut(s)	197, 347, 1036, 1145, 1166, 1826, 1880, 2284, 2458
BseMII	CTCAG	4 cut(s)	384, 773, 1523, 2108
BseNI	ACTGG	5 cut(s)	93, 715, 1150, 1171, 1493
BseRI	GAGGAG	2 cut(s)	119, 842
BseSI	GKGCMC	1 cut(s)	2196
BseXI	GCAGC	4 cut(s)	947, 1211, 1394, 1935
BseYI	CCCAGC	1 cut(s)	1536
BsgI	GTGCAG	2 cut(s)	1053, 2200
Bsh1285I	CGRYCG	1 cut(s)	2655
BshFI	GGCC	6 cut(s)	31, 36, 345, 1708, 1735, 2194
BshTI	ACCGGT	1 cut(s)	2237
BsiEI	CGRYCG	1 cut(s)	2655
BsiHKAI	GWGCWC	2 cut(s)	1207, 2116
BsiSI	CCGG	4 cut(s)	32, 63, 165, 2238
BslFI	GGGAC	5 cut(s)	175, 749, 1448, 2261, 2267
BslI	CCNNNNNNNGG	9 cut(s)	197, 347, 1036, 1145, 1166, 1826, 1880, 2284, 2458
BsmAI	GTCTC	1 cut(s)	45
BsmFI	GGGAC	5 cut(s)	175, 749, 1448, 2261, 2267
BsmI	GAATGC	1 cut(s)	409
BsnI	GGCC	6 cut(s)	31, 36, 345, 1708, 1735, 2194
Bsp120I	GGGCCC	1 cut(s)	2192
Bsp1286I	GDGCHC	4 cut(s)	1207, 2059, 2116, 2196
Bsp1407I	TGTACA	2 cut(s)	2443, 2513
Bsp1720I	GCTNAGC	1 cut(s)	759
Bsp19I	CCATGG	1 cut(s)	2432
BspACI	CCGC	6 cut(s)	181, 673, 1227, 1970, 2263, 2651
BspANI	GGCC	6 cut(s)	31, 36, 345, 1708, 1735, 2194
BspCNI	CTCAG	4 cut(s)	383, 772, 1524, 2107
BspHI	TCATGA	1 cut(s)	2365
BspLI	GGNNCC	8 cut(s)	61, 163, 1542, 1581, 1736, 1884, 2172, 2194
BspMAI	CTGCAG	1 cut(s)	117
BspMI	ACCTGC	1 cut(s)	2482
BspPI	GGATC	6 cut(s)	483, 1082, 1574, 1587, 1811, 2400
BspQI	GCTCTTC	1 cut(s)	1911
BspTI	CTTAAG	2 cut(s)	1718, 2408
BsrFI	RCCGGY	1 cut(s)	2237
BsrGI	TGTACA	2 cut(s)	2443, 2513
BsrI	ACTGG	5 cut(s)	93, 715, 1150, 1171, 1493
BssAI	RCCGGY	1 cut(s)	2237
BssECI	CCNNGG	4 cut(s)	346, 2432, 2452, 2682
BssSI	CACGAG	1 cut(s)	67
BssT1I	CCWWGG	3 cut(s)	2432, 2452, 2682
Bst2BI	CACGAG	1 cut(s)	67
Bst2UI	CCWGG	3 cut(s)	342, 1628, 1860
Bst4CI	ACNGT	7 cut(s)	689, 929, 1031, 1303, 1331, 2106, 2333
Bst6I	CTCTTC	4 cut(s)	123, 170, 1911, 1921
BstAFI	CTTAAG	2 cut(s)	1718, 2408
BstAPI	GCANNNNNTGC	1 cut(s)	681
BstAUI	TGTACA	2 cut(s)	2443, 2513
BstC8I	GCNNGC	3 cut(s)	697, 1560, 1633
BstDSI	CCRYGG	2 cut(s)	346, 2432
BstENI	CCTNNNNNAGG	1 cut(s)	2456
BstF5I	GGATG	6 cut(s)	139, 280, 652, 1022, 2356, 2486
BstHHI	GCGC	1 cut(s)	772
BstMAI	GTCTC	1 cut(s)	45
BstMCI	CGRYCG	1 cut(s)	2655
BstMWI	GCNNNNNNNGC	7 cut(s)	669, 681, 769, 1233, 1632, 1714, 2687
BstNI	CCWGG	3 cut(s)	342, 1628, 1860
BstPAI	GACNNNNGTC	2 cut(s)	147, 1881
BstSCI	CCNGG	4 cut(s)	31, 340, 1626, 1858
BstSFI	CTRYAG	2 cut(s)	113, 2526
BstSLI	GKGCMC	1 cut(s)	2196
BstV1I	GCAGC	4 cut(s)	947, 1211, 1394, 1935
BstV2I	GAAGAC	1 cut(s)	417
BstX2I	RGATCY	4 cut(s)	1087, 1453, 1579, 1816
BstXI	CCANNNNNNTGG	1 cut(s)	710
BstYI	RGATCY	4 cut(s)	1087, 1453, 1579, 1816
BsuI	GTATCC	3 cut(s)	614, 636, 2548
BsuRI	GGCC	6 cut(s)	31, 36, 345, 1708, 1735, 2194
BtgI	CCRYGG	2 cut(s)	346, 2432
BtsCI	GGATG	6 cut(s)	139, 280, 652, 1022, 2356, 2486
BtsIMutI	CAGTG	3 cut(s)	378, 548, 925
BveI	ACCTGC	1 cut(s)	2482
Cac8I	GCNNGC	3 cut(s)	697, 1560, 1633
CciI	TCATGA	1 cut(s)	2365
CfoI	GCGC	1 cut(s)	772
Cfr10I	RCCGGY	1 cut(s)	2237
Cfr13I	GGNCC	7 cut(s)	34, 118, 162, 1734, 1883, 2192, 2193
Csp6I	GTAC	9 cut(s)	641, 1072, 1304, 1332, 1511, 1590, 1810, 2444, 2514
CspAI	ACCGGT	1 cut(s)	2237
CviQI	GTAC	9 cut(s)	641, 1072, 1304, 1332, 1511, 1590, 1810, 2444, 2514
EaeI	YGGCCR	2 cut(s)	343, 1706
Eam1104I	CTCTTC	4 cut(s)	123, 170, 1911, 1921
EarI	CTCTTC	4 cut(s)	123, 170, 1911, 1921
Eco130I	CCWWGG	3 cut(s)	2432, 2452, 2682
Eco24I	GRGCYC	2 cut(s)	2059, 2196
Eco47I	GGWCC	3 cut(s)	118, 162, 1883
Eco57I	CTGAAG	7 cut(s)	821, 1268, 1450, 1745, 2060, 2318, 2566
EcoNI	CCTNNNNNAGG	1 cut(s)	2456
EcoRI	GAATTC	4 cut(s)	74, 448, 2089, 2315
EcoRII	CCWGG	3 cut(s)	340, 1626, 1858
EcoT14I	CCWWGG	3 cut(s)	2432, 2452, 2682
EcoT38I	GRGCYC	2 cut(s)	2059, 2196
ErhI	CCWWGG	3 cut(s)	2432, 2452, 2682
FalI	AAGNNNNNCTT	2 cut(s)	1440, 1472
FaqI	GGGAC	5 cut(s)	175, 749, 1448, 2261, 2267
FbaI	TGATCA	2 cut(s)	309, 2368
FblI	GTMKAC	2 cut(s)	2529, 2655
Fnu4HI	GCNGC	5 cut(s)	673, 961, 1225, 1383, 1949
FokI	GGATG	6 cut(s)	146, 287, 659, 1029, 2343, 2493
FriOI	GRGCYC	2 cut(s)	2059, 2196
Fsp4HI	GCNGC	5 cut(s)	673, 961, 1225, 1383, 1949
FspBI	CTAG	5 cut(s)	1307, 1389, 1821, 2006, 2610
GlaI	GCGC	1 cut(s)	771
GluI	GCNGC	5 cut(s)	673, 961, 1225, 1383, 1949
GsaI	CCCAGC	1 cut(s)	1540
GsuI	CTGGAG	5 cut(s)	110, 174, 1104, 1881, 2130
HaeIII	GGCC	6 cut(s)	31, 36, 345, 1708, 1735, 2194
HapII	CCGG	4 cut(s)	32, 63, 165, 2238
HhaI	GCGC	1 cut(s)	772
Hin6I	GCGC	1 cut(s)	770
HinP1I	GCGC	1 cut(s)	770
HincII	GTYRAC	1 cut(s)	2656
HindII	GTYRAC	1 cut(s)	2656
HindIII	AAGCTT	1 cut(s)	2405
HpaII	CCGG	4 cut(s)	32, 63, 165, 2238
HphI	GGTGA	9 cut(s)	423, 1051, 1086, 1241, 1364, 1499, 2021, 2098, 2141
Hpy166II	GTNNAC	5 cut(s)	186, 1490, 1812, 2530, 2656
Hpy8I	GTNNAC	5 cut(s)	186, 1490, 1812, 2530, 2656
HpyCH4III	ACNGT	7 cut(s)	689, 929, 1031, 1303, 1331, 2106, 2333
HpyF10VI	GCNNNNNNNGC	7 cut(s)	669, 681, 769, 1233, 1632, 1714, 2687
HspAI	GCGC	1 cut(s)	770
Ksp22I	TGATCA	2 cut(s)	309, 2368
LguI	GCTCTTC	1 cut(s)	1911
Lsp1109I	GCAGC	4 cut(s)	947, 1211, 1394, 1935
LweI	GCATC	8 cut(s)	247, 476, 961, 1007, 1704, 1957, 2173, 2471
MaeI	CTAG	5 cut(s)	1307, 1389, 1821, 2006, 2610
MaeIII	GTNAC	4 cut(s)	84, 896, 1403, 1939
MfeI	CAATTG	1 cut(s)	939
MflI	RGATCY	4 cut(s)	1087, 1453, 1579, 1816
MhlI	GDGCHC	4 cut(s)	1207, 2059, 2116, 2196
MlsI	TGGCCA	1 cut(s)	1708
MluNI	TGGCCA	1 cut(s)	1708
MlyI	GAGTC	4 cut(s)	404, 869, 1872, 2433
MmeI	TCCRAC	2 cut(s)	894, 2265
Mox20I	TGGCCA	1 cut(s)	1708
MscI	TGGCCA	1 cut(s)	1708
MslI	CAYNNNNRTG	3 cut(s)	1099, 1347, 1776
Msp20I	TGGCCA	1 cut(s)	1708
MspCI	CTTAAG	2 cut(s)	1718, 2408
MspI	CCGG	4 cut(s)	32, 63, 165, 2238
MspR9I	CCNGG	4 cut(s)	33, 342, 1628, 1860
MunI	CAATTG	1 cut(s)	939
Mva1269I	GAATGC	1 cut(s)	409
MvaI	CCWGG	3 cut(s)	342, 1628, 1860
MwoI	GCNNNNNNNGC	7 cut(s)	669, 681, 769, 1233, 1632, 1714, 2687
NciI	CCSGG	1 cut(s)	33
NcoI	CCATGG	1 cut(s)	2432
NlaIV	GGNNCC	8 cut(s)	61, 163, 1542, 1581, 1736, 1884, 2172, 2194
NmeAIII	GCCGAG	1 cut(s)	1636
NmuCI	GTSAC	1 cut(s)	1403
PagI	TCATGA	1 cut(s)	2365
PciSI	GCTCTTC	1 cut(s)	1911
PctI	GAATGC	1 cut(s)	409
PfeI	GAWTC	9 cut(s)	377, 554, 1254, 1397, 1427, 1756, 1934, 2500, 2599
PflMI	CCANNNNNTGG	1 cut(s)	197
PinAI	ACCGGT	1 cut(s)	2237
PkrI	GCNGC	5 cut(s)	674, 962, 1226, 1384, 1950
PleI	GAGTC	4 cut(s)	403, 868, 1871, 2432
PpsI	GAGTC	4 cut(s)	403, 868, 1871, 2432
PshAI	GACNNNNGTC	2 cut(s)	147, 1881
PshBI	ATTAAT	1 cut(s)	1482
PsiI	TTATAA	1 cut(s)	878
Psp6I	CCWGG	3 cut(s)	340, 1626, 1858
PspFI	CCCAGC	1 cut(s)	1536
PspGI	CCWGG	3 cut(s)	340, 1626, 1858
PspN4I	GGNNCC	8 cut(s)	61, 163, 1542, 1581, 1736, 1884, 2172, 2194
PspOMI	GGGCCC	1 cut(s)	2192
PspPI	GGNCC	7 cut(s)	34, 118, 162, 1734, 1883, 2192, 2193
PstI	CTGCAG	1 cut(s)	117
PsuI	RGATCY	4 cut(s)	1087, 1453, 1579, 1816
RsaI	GTAC	9 cut(s)	642, 1073, 1305, 1333, 1512, 1591, 1811, 2445, 2515
RsaNI	GTAC	9 cut(s)	641, 1072, 1304, 1332, 1511, 1590, 1810, 2444, 2514
RseI	CAYNNNNRTG	3 cut(s)	1099, 1347, 1776
SalI	GTCGAC	1 cut(s)	2654
SapI	GCTCTTC	1 cut(s)	1911
SatI	GCNGC	5 cut(s)	673, 961, 1225, 1383, 1949
Sau96I	GGNCC	7 cut(s)	34, 118, 162, 1734, 1883, 2192, 2193
SchI	GAGTC	4 cut(s)	404, 869, 1872, 2433
ScrFI	CCNGG	4 cut(s)	33, 342, 1628, 1860
SduI	GDGCHC	4 cut(s)	1207, 2059, 2116, 2196
SfaNI	GCATC	8 cut(s)	247, 476, 961, 1007, 1704, 1957, 2173, 2471
SfcI	CTRYAG	2 cut(s)	113, 2526
SinI	GGWCC	3 cut(s)	118, 162, 1883
SmiMI	CAYNNNNRTG	3 cut(s)	1099, 1347, 1776
SmlI	CTYRAG	5 cut(s)	1718, 2408, 2504, 2624, 2694
SmoI	CTYRAG	5 cut(s)	1718, 2408, 2504, 2624, 2694
SsiI	CCGC	6 cut(s)	181, 673, 1227, 1970, 2263, 2651
SspI	AATATT	2 cut(s)	850, 1978
SspMI	CTAG	5 cut(s)	1307, 1389, 1821, 2006, 2610
StyD4I	CCNGG	4 cut(s)	31, 340, 1626, 1858
StyI	CCWWGG	3 cut(s)	2432, 2452, 2682
TaaI	ACNGT	7 cut(s)	689, 929, 1031, 1303, 1331, 2106, 2333
TaqI	TCGA	3 cut(s)	955, 2427, 2655
TatI	WGTACW	6 cut(s)	1071, 1303, 1510, 1809, 2443, 2513
TauI	GCSGC	1 cut(s)	675
TfiI	GAWTC	9 cut(s)	377, 554, 1254, 1397, 1427, 1756, 1934, 2500, 2599
TscAI	CASTG	3 cut(s)	378, 548, 932
TseFI	GTSAC	1 cut(s)	1403
TseI	GCWGC	4 cut(s)	960, 1224, 1382, 1948
Tsp45I	GTSAC	1 cut(s)	1403
TspGWI	ACGGA	6 cut(s)	340, 596, 1694, 1927, 2234, 2555
TspRI	CASTG	3 cut(s)	378, 548, 932
Van91I	CCANNNNNTGG	1 cut(s)	197
Vha464I	CTTAAG	2 cut(s)	1718, 2408
VpaK11BI	GGWCC	3 cut(s)	118, 162, 1883
VspI	ATTAAT	1 cut(s)	1482
XagI	CCTNNNNNAGG	1 cut(s)	2456
XapI	RAATTY	8 cut(s)	74, 448, 806, 1699, 1781, 2089, 2315, 2417
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1551, 1624
XmiI	GTMKAC	2 cut(s)	2529, 2655
XspI	CTAG	5 cut(s)	1307, 1389, 1821, 2006, 2610

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.