Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0004714

Physical Location & Seq

Genomic Coordinates Reverse (-)

40607236 .. 40611894

Gene Structure 4659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1325700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGAAGGATAATGAAGAAGTTAATTTAAAGTGTCATCAGTGTATGAAAGAGGAGAAGAAGACTATTGTTTCCTGTTCCAATTGTAAAAAGAACTCCTATTGCATCCGCTGTATCAAGCAATGGTATCCTCACATGAAAGTAAAGGAAGTCAAGGAACTTTGCCCATTTTGCCGTAAGAATTGCAACTGTAATGTATGCCTGCACTCAACTGGTGTGATTAAGATACCAGAGATGGATTTAGATGACTGCAAAAAGGCTCAGCATCTGGAGCATTTACTTTCCAACTTGCTTCCATTTCTAAAGAAAATTTCCCAAGAACAAAATCAGGAGATAGAGATTGAAGCTAATCTTCGAGGGCTTTCACCTTCTGCAGTTGAAATACCACAGACTCTCTGTTTTAACGATGAGCGTGTCTATTGCAACCACTGTGCAACTTCGATCATTGATCTACACCGAAGCTGCTCAAAATGTTCGTATGAACTTTGTCTAAATTGCTGCCGAGAAATTCGCCAGGGATGTCTTTTTGACCGTGGAGACGTGAAATTTCTGTATAGGAGTAGGGGTTATGATTACATCCATGGTGGAGATCCGGCACCTGATTGTTGTCCCTTGAAAGATTCAGAGGACCATATTGAGCCTTTGACTGAGTGGAAGGCAAACGGTGATGCTACTGTTAGTTGTGCTCCGAAAGAAATGGGTGGCTGTGGTGACTGCGTGTTGGATCTCAAGCGCATCCTTCCGGCTGACTGGATCTCAAATTTAGTGGTGAAAGCAAAATATTTATTAGAGACTTTCCAAAAAGAGCGTTCTACATTCAAGCATAATTGTGAAACAAGAAGAGATATGTTACGAAAAGCAGCTTCCAGAGAAGGTTCTTGTGACAACTTCTTGTTTTGCCCTGATTCAAAGGACACTCTGAAAGAAGAAGAGCTTTTGCACTTTAAAGAACATTGGGTGAATGGCGAACCAGTTATTGTTAAAAATGTGCTCGAACAGGCAAATGGTCTGAGCTGGGAACCAATGGTAATGTGGCGTGCTTTAAGTGAAAATATGGATGCAGCTAGTACACAATATTCAGAAGTAAAGACCATCGATTGCCTGGCTGGTTGTGAGGTGGAAATCAACACTCGTCAGTTTTTTCAAGGATACACCGAAGGGAGAATGTACAAAAACTTGTGGCCAGAGATGCTTAAGCTGAAGGATTGGCCCCCTTCTGATAAGTTTGAGGATCTTTTACCGCGTCATTGTGATGAATTTATCAGTGCCTTGCCATTTCTAGAGTACACAGATCCTAGAGCTGGTTTCCTTAACCTTGCTGTTAAGTTGCCGCCAGGTGTCTTGAAACCAGACTTGGGTCCAAAAACATATATTGCTTATGGTTTTATGGAAGAGCTTGGAAGAGGAGACTCCGTAACTAAGCTCCATTGTGACATGTCTGATGCGGTGAATATTTTGACACATACCGCTGAAGTGCAGTCAAGTAATGAGCAGCAGTCTGCAATTTCTAGGTTGAAAAAGTTACATAGGGTGCAAGATGAAAGAGAACTTATGGATTGGGAGAATTCTCACAAGGATCGTGCTGGACAGTCTGGTGGACAGACAGAGGACAGAGAAACCCTAGAAAGCAATCGCCCATCTGAAATTAATGGAGAATTGAAAGTTCGGAAAGATGAACTAGATGATCCGTCTTGTTCTTCCTCCAATGAAGCAACCGAGGAAACGGGTGGTGCTTTGTGGGACATCTTCCGCAGGGAGGATGTCCCTAAGTTAGAGGCTTATCTGATGAAGCATTATAAAGAATTTAGGCACACCTATTGCTCACTAGTTGAAAAGGTCATTCATCCAATTCATGACCAATCTTTTTATTTAACGTTGGAGCACAAACGGAGGCTGAAGGAGGAATTTGGTGTCGAACCATGGACTTTTGTACAAAGACTCGGAGAGGCGGTATTTATTCCAGCCGGATGCCCACACCAAGTCAGGAATCTCAAGTCCTGCACGAAAGTAGCAGCGGACTTCGTATCTCCTGAAAATGTCCATGAGTGCCTCCGTTTAACGAGGTCCGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

JmjC zf-4CXXC_R1

Protein Analysis

690

Amino Acids

79.21

Weight (kDa)

5.8

Isoelectric Point (pI)

50.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-4CXXC_R1	PF10497	8 - 72	8.4e-06	Zinc-finger domain of monoamine-oxidase A repressor R1
JmjC	PF02373	575 - 673	1.6e-13	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11950 AT1G11950 AT1G11950 AT1G62310
fragaria_vesca	FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550
malus_domestica	MD05G1351300.v1.1 MD10G1325700.v1.1
prunus_persica	Prupe.4G016300_v2.0.a1
pyrus_communis	pycom05g31840 pycom10g27540
rosa_chinensis	RchiOBHm_Chr5g0002371
rosa_laevigata	RLG00000031023
rosa_multiflora	Rmu_co8351855.1_g000001 Rmu_co8445921.1_g000001 Rmu_sc0006137.1_g000004 Rmu_sc0006137.1_g000005 Rmu_sc0017945.1_g000004
rosa_rugosa	Rorug04G0395600 Rorug04G0395700.1
rosa_samantha	Rh5AG018400 Rh5BG021100 Rh5CG020300 Rh5DG019300
rosa_wichuraiana	Rw5G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1794
AccB1I	GGYRCC	1 cut(s)	592
AccII	CGCG	1 cut(s)	1240
AciI	CCGC	8 cut(s)	106, 1238, 1328, 1442, 1464, 1747, 1946, 2012
AclI	AACGTT	1 cut(s)	1871
AclWI	GGATC	7 cut(s)	581, 729, 758, 1236, 1283, 1581, 1676
AcoI	YGGCCR	1 cut(s)	1178
AcsI	RAATTY	8 cut(s)	306, 504, 542, 757, 1253, 1561, 1799, 1901
AcuI	CTGAAG	3 cut(s)	1217, 1488, 1913
AfaI	GTAC	4 cut(s)	1066, 1166, 1283, 1929
AfiI	CCNNNNNNNGG	3 cut(s)	1298, 1352, 1753
AflII	CTTAAG	1 cut(s)	1190
AflIII	ACRYGT	1 cut(s)	1431
AhlI	ACTAGT	1 cut(s)	1822
AjiI	CACGTC	1 cut(s)	538
AjnI	CCWGG	3 cut(s)	510, 1098, 1330
AjuI	GAANNNNNNNTTGG	2 cut(s)	1334, 1366
Alw21I	GWGCWC	3 cut(s)	685, 990, 1881
Alw26I	GTCTC	3 cut(s)	528, 782, 1398
AlwI	GGATC	7 cut(s)	581, 729, 758, 1236, 1283, 1581, 1676
AlwNI	CAGNNNCTG	1 cut(s)	265
AoxI	GGCC	2 cut(s)	1178, 1205
ApeKI	GCWGC	6 cut(s)	459, 495, 857, 1058, 1489, 2009
ApoI	RAATTY	8 cut(s)	306, 504, 542, 757, 1253, 1561, 1799, 1901
AseI	ATTAAT	1 cut(s)	1644
AspLEI	GCGC	1 cut(s)	732
AspS9I	GGNCC	4 cut(s)	625, 1206, 1355, 2061
AsuHPI	GGTGA	6 cut(s)	354, 674, 719, 778, 967, 1456
AvaII	GGWCC	3 cut(s)	625, 1355, 2061
BalI	TGGCCA	1 cut(s)	1180
BanI	GGYRCC	1 cut(s)	592
BbsI	GAAGAC	1 cut(s)	65
Bbv12I	GWGCWC	3 cut(s)	685, 990, 1881
BbvI	GCAGC	6 cut(s)	446, 482, 869, 1070, 1501, 2021
BccI	CCATC	3 cut(s)	226, 1097, 1642
BceAI	ACGGC	1 cut(s)	156
BciT130I	CCWGG	3 cut(s)	512, 1100, 1332
BciVI	GTATCC	2 cut(s)	135, 1139
BcoDI	GTCTC	3 cut(s)	528, 782, 1398
BcuI	ACTAGT	1 cut(s)	1822
BfaI	CTAG	7 cut(s)	1062, 1277, 1293, 1506, 1619, 1676, 1823
BfmI	CTRYAG	1 cut(s)	369
BfrI	CTTAAG	1 cut(s)	1190
BfuI	GTATCC	2 cut(s)	135, 1139
BisI	GCNGC	7 cut(s)	460, 496, 858, 1059, 1328, 1490, 2010
BlpI	GCTNAGC	1 cut(s)	258
BlsI	GCNGC	7 cut(s)	461, 497, 859, 1060, 1329, 1491, 2011
Bme1390I	CCNGG	3 cut(s)	512, 1100, 1332
Bme18I	GGWCC	3 cut(s)	625, 1355, 2061
BmgBI	CACGTC	1 cut(s)	538
BmgT120I	GGNCC	4 cut(s)	625, 1206, 1355, 2061
BmiI	GGNNCC	4 cut(s)	594, 1017, 1208, 1356
BmrFI	CCNGG	3 cut(s)	512, 1100, 1332
BmsI	GCATC	8 cut(s)	111, 271, 655, 741, 1045, 1176, 1429, 1955
BoxI	GACNNNNGTC	1 cut(s)	1353
BpiI	GAAGAC	1 cut(s)	65
BpmI	CTGGAG	1 cut(s)	287
Bpu1102I	GCTNAGC	1 cut(s)	258
BpuEI	CTTGAG	2 cut(s)	710, 1973
Bsa29I	ATCGAT	1 cut(s)	1092
BsaJI	CCNNGG	5 cut(s)	511, 529, 577, 1713, 1916
BsaXI	ACNNNNNCTCC	6 cut(s)	547, 577, 1395, 1425, 1932, 1962
Bsc4I	CCNNNNNNNGG	3 cut(s)	1298, 1352, 1753
Bse1I	ACTGG	3 cut(s)	214, 752, 968
Bse3DI	GCAATG	1 cut(s)	125
BseBI	CCWGG	3 cut(s)	512, 1100, 1332
BseCI	ATCGAT	1 cut(s)	1092
BseDI	CCNNGG	5 cut(s)	511, 529, 577, 1713, 1916
BseGI	GGATG	8 cut(s)	102, 521, 573, 732, 1060, 1762, 1840, 1970
BseLI	CCNNNNNNNGG	3 cut(s)	1298, 1352, 1753
BseMI	GCAATG	1 cut(s)	125
BseMII	CTCAG	3 cut(s)	272, 636, 998
BseNI	ACTGG	3 cut(s)	214, 752, 968
BseRI	GAGGAG	2 cut(s)	65, 1416
BseXI	GCAGC	6 cut(s)	446, 482, 869, 1070, 1501, 2021
BseYI	CCCAGC	1 cut(s)	1011
BsgI	GTGCAG	3 cut(s)	185, 1493, 1981
Bsh1236I	CGCG	1 cut(s)	1240
BshFI	GGCC	2 cut(s)	1180, 1207
BshNI	GGYRCC	1 cut(s)	592
BshVI	ATCGAT	1 cut(s)	1092
BsiHKAI	GWGCWC	3 cut(s)	685, 990, 1881
BsiSI	CCGG	3 cut(s)	590, 740, 1962
BslFI	GGGAC	3 cut(s)	591, 1745, 1751
BslI	CCNNNNNNNGG	3 cut(s)	1298, 1352, 1753
BsmAI	GTCTC	3 cut(s)	528, 782, 1398
BsmBI	CGTCTC	1 cut(s)	528
BsmFI	GGGAC	3 cut(s)	591, 1745, 1751
BsnI	GGCC	2 cut(s)	1180, 1207
Bsp1286I	GDGCHC	3 cut(s)	685, 990, 1881
Bsp1407I	TGTACA	2 cut(s)	1164, 1927
Bsp143I	GATC	9 cut(s)	438, 445, 586, 721, 750, 1228, 1288, 1573, 1681
Bsp1720I	GCTNAGC	1 cut(s)	258
Bsp19I	CCATGG	2 cut(s)	577, 1916
BspACI	CCGC	8 cut(s)	106, 1238, 1328, 1442, 1464, 1747, 1946, 2012
BspANI	GGCC	2 cut(s)	1180, 1207
BspCNI	CTCAG	3 cut(s)	271, 637, 999
BspDI	ATCGAT	1 cut(s)	1092
BspFNI	CGCG	1 cut(s)	1240
BspHI	TCATGA	1 cut(s)	1849
BspLI	GGNNCC	4 cut(s)	594, 1017, 1208, 1356
BspMAI	CTGCAG	1 cut(s)	373
BspPI	GGATC	7 cut(s)	581, 729, 758, 1236, 1283, 1581, 1676
BspQI	GCTCTTC	2 cut(s)	921, 1383
BspT107I	GGYRCC	1 cut(s)	592
BspTI	CTTAAG	1 cut(s)	1190
BsrDI	GCAATG	1 cut(s)	125
BsrGI	TGTACA	2 cut(s)	1164, 1927
BsrI	ACTGG	3 cut(s)	214, 752, 968
BssECI	CCNNGG	5 cut(s)	511, 529, 577, 1713, 1916
BssMI	GATC	9 cut(s)	438, 445, 586, 721, 750, 1228, 1288, 1573, 1681
BssT1I	CCWWGG	2 cut(s)	577, 1916
Bst2UI	CCWGG	3 cut(s)	512, 1100, 1332
Bst4CI	ACNGT	6 cut(s)	188, 428, 530, 662, 673, 1587
Bst6I	CTCTTC	4 cut(s)	832, 921, 1383, 1393
BstAFI	CTTAAG	1 cut(s)	1190
BstAUI	TGTACA	2 cut(s)	1164, 1927
BstC8I	GCNNGC	2 cut(s)	200, 1035
BstDEI	CTNAG	5 cut(s)	258, 645, 1007, 1416, 1764
BstDSI	CCRYGG	3 cut(s)	529, 577, 1916
BstF5I	GGATG	8 cut(s)	102, 521, 573, 732, 1060, 1762, 1840, 1970
BstFNI	CGCG	1 cut(s)	1240
BstHHI	GCGC	1 cut(s)	732
BstKTI	GATC	9 cut(s)	441, 448, 589, 724, 753, 1231, 1291, 1576, 1684
BstMAI	GTCTC	3 cut(s)	528, 782, 1398
BstMBI	GATC	9 cut(s)	438, 445, 586, 721, 750, 1228, 1288, 1573, 1681
BstMWI	GCNNNNNNNGC	3 cut(s)	168, 268, 1186
BstNI	CCWGG	3 cut(s)	512, 1100, 1332
BstNSI	RCATGY	1 cut(s)	1435
BstPAI	GACNNNNGTC	1 cut(s)	1353
BstSCI	CCNGG	3 cut(s)	510, 1098, 1330
BstSFI	CTRYAG	1 cut(s)	369
BstUI	CGCG	1 cut(s)	1240
BstV1I	GCAGC	6 cut(s)	446, 482, 869, 1070, 1501, 2021
BstV2I	GAAGAC	1 cut(s)	65
BstX2I	RGATCY	5 cut(s)	586, 721, 750, 1228, 1288
BstYI	RGATCY	5 cut(s)	586, 721, 750, 1228, 1288
Bsu15I	ATCGAT	1 cut(s)	1092
BsuI	GTATCC	2 cut(s)	135, 1139
BsuRI	GGCC	2 cut(s)	1180, 1207
BsuTUI	ATCGAT	1 cut(s)	1092
BtgI	CCRYGG	3 cut(s)	529, 577, 1916
BtrI	CACGTC	1 cut(s)	538
BtsCI	GGATG	8 cut(s)	102, 521, 573, 732, 1060, 1762, 1840, 1970
BtsIMutI	CAGTG	3 cut(s)	44, 424, 1267
Cac8I	GCNNGC	2 cut(s)	200, 1035
CaiI	CAGNNNCTG	1 cut(s)	265
CciI	TCATGA	1 cut(s)	1849
CfoI	GCGC	1 cut(s)	732
Cfr13I	GGNCC	4 cut(s)	625, 1206, 1355, 2061
ClaI	ATCGAT	1 cut(s)	1092
CseI	GACGC	1 cut(s)	1229
Csp6I	GTAC	4 cut(s)	1065, 1165, 1282, 1928
CspCI	CAANNNNNGTGG	2 cut(s)	744, 779
CviAII	CATG	6 cut(s)	133, 578, 1432, 1850, 1917, 2039
CviQI	GTAC	4 cut(s)	1065, 1165, 1282, 1928
DdeI	CTNAG	5 cut(s)	258, 645, 1007, 1416, 1764
DpnI	GATC	9 cut(s)	440, 447, 588, 723, 752, 1230, 1290, 1575, 1683
DpnII	GATC	9 cut(s)	438, 445, 586, 721, 750, 1228, 1288, 1573, 1681
DraI	TTTAAA	2 cut(s)	27, 943
EaeI	YGGCCR	1 cut(s)	1178
Eam1104I	CTCTTC	4 cut(s)	832, 921, 1383, 1393
EarI	CTCTTC	4 cut(s)	832, 921, 1383, 1393
Eco130I	CCWWGG	2 cut(s)	577, 1916
Eco47I	GGWCC	3 cut(s)	625, 1355, 2061
Eco57I	CTGAAG	3 cut(s)	1217, 1488, 1913
EcoRI	GAATTC	1 cut(s)	1561
EcoRII	CCWGG	3 cut(s)	510, 1098, 1330
EcoT14I	CCWWGG	2 cut(s)	577, 1916
ErhI	CCWWGG	2 cut(s)	577, 1916
Esp3I	CGTCTC	1 cut(s)	528
FaeI	CATG	6 cut(s)	136, 581, 1435, 1853, 1920, 2042
FalI	AAGNNNNNCTT	4 cut(s)	333, 365, 915, 947
FaqI	GGGAC	3 cut(s)	591, 1745, 1751
FatI	CATG	6 cut(s)	132, 577, 1431, 1849, 1916, 2038
Fnu4HI	GCNGC	7 cut(s)	460, 496, 858, 1059, 1328, 1490, 2010
FokI	GGATG	8 cut(s)	89, 528, 560, 719, 1067, 1769, 1827, 1977
Fsp4HI	GCNGC	7 cut(s)	460, 496, 858, 1059, 1328, 1490, 2010
FspBI	CTAG	7 cut(s)	1062, 1277, 1293, 1506, 1619, 1676, 1823
GlaI	GCGC	1 cut(s)	731
GluI	GCNGC	7 cut(s)	460, 496, 858, 1059, 1328, 1490, 2010
GsaI	CCCAGC	1 cut(s)	1015
GsuI	CTGGAG	1 cut(s)	287
HaeIII	GGCC	2 cut(s)	1180, 1207
HapII	CCGG	3 cut(s)	590, 740, 1962
HgaI	GACGC	1 cut(s)	1229
HhaI	GCGC	1 cut(s)	732
Hin1II	CATG	6 cut(s)	136, 581, 1435, 1853, 1920, 2042
Hin6I	GCGC	1 cut(s)	730
HinP1I	GCGC	1 cut(s)	730
HinfI	GANTC	6 cut(s)	388, 617, 902, 1406, 1935, 1984
HpaII	CCGG	3 cut(s)	590, 740, 1962
HphI	GGTGA	6 cut(s)	354, 674, 719, 778, 967, 1456
Hpy166II	GTNNAC	3 cut(s)	1067, 1284, 1595
Hpy188III	TCNNGA	8 cut(s)	266, 326, 864, 1277, 1339, 1850, 1981, 2027
Hpy8I	GTNNAC	3 cut(s)	1067, 1284, 1595
HpyAV	CCTTC	8 cut(s)	375, 646, 746, 863, 1148, 1192, 1221, 1888
HpyCH4III	ACNGT	6 cut(s)	188, 428, 530, 662, 673, 1587
HpyCH4IV	ACGT	2 cut(s)	537, 1871
HpyF10VI	GCNNNNNNNGC	3 cut(s)	168, 268, 1186
HpyF3I	CTNAG	5 cut(s)	258, 645, 1007, 1416, 1764
HpySE526I	ACGT	2 cut(s)	537, 1871
Hsp92II	CATG	6 cut(s)	136, 581, 1435, 1853, 1920, 2042
HspAI	GCGC	1 cut(s)	730
Kzo9I	GATC	9 cut(s)	438, 445, 586, 721, 750, 1228, 1288, 1573, 1681
LguI	GCTCTTC	2 cut(s)	921, 1383
LmnI	GCTCC	4 cut(s)	268, 688, 1425, 1876
Lsp1109I	GCAGC	6 cut(s)	446, 482, 869, 1070, 1501, 2021
LweI	GCATC	8 cut(s)	111, 271, 655, 741, 1045, 1176, 1429, 1955
MaeI	CTAG	7 cut(s)	1062, 1277, 1293, 1506, 1619, 1676, 1823
MaeII	ACGT	2 cut(s)	537, 1871
MaeIII	GTNAC	6 cut(s)	707, 846, 878, 1411, 1427, 1518
MalI	GATC	9 cut(s)	440, 447, 588, 723, 752, 1230, 1290, 1575, 1683
MboI	GATC	9 cut(s)	438, 445, 586, 721, 750, 1228, 1288, 1573, 1681
MfeI	CAATTG	1 cut(s)	79
MflI	RGATCY	5 cut(s)	586, 721, 750, 1228, 1288
MhlI	GDGCHC	3 cut(s)	685, 990, 1881
MlsI	TGGCCA	1 cut(s)	1180
MluNI	TGGCCA	1 cut(s)	1180
MlyI	GAGTC	3 cut(s)	382, 1400, 1929
MmeI	TCCRAC	3 cut(s)	306, 699, 1854
Mox20I	TGGCCA	1 cut(s)	1180
MscI	TGGCCA	1 cut(s)	1180
MslI	CAYNNNNRTG	2 cut(s)	825, 1248
Msp20I	TGGCCA	1 cut(s)	1180
MspA1I	CMGCKG	3 cut(s)	108, 1466, 2012
MspCI	CTTAAG	1 cut(s)	1190
MspI	CCGG	3 cut(s)	590, 740, 1962
MspR9I	CCNGG	3 cut(s)	512, 1100, 1332
MunI	CAATTG	1 cut(s)	79
MvaI	CCWGG	3 cut(s)	512, 1100, 1332
MvnI	CGCG	1 cut(s)	1240
MwoI	GCNNNNNNNGC	3 cut(s)	168, 268, 1186
NcoI	CCATGG	2 cut(s)	577, 1916
NdeII	GATC	9 cut(s)	438, 445, 586, 721, 750, 1228, 1288, 1573, 1681
NlaIII	CATG	6 cut(s)	136, 581, 1435, 1853, 1920, 2042
NlaIV	GGNNCC	4 cut(s)	594, 1017, 1208, 1356
NmeAIII	GCCGAG	1 cut(s)	524
NmuCI	GTSAC	3 cut(s)	707, 878, 1427
NspI	RCATGY	1 cut(s)	1435
PagI	TCATGA	1 cut(s)	1849
PciI	ACATGT	1 cut(s)	1431
PciSI	GCTCTTC	2 cut(s)	921, 1383
PfeI	GAWTC	3 cut(s)	617, 902, 1984
PkrI	GCNGC	7 cut(s)	461, 497, 859, 1060, 1329, 1491, 2011
PleI	GAGTC	3 cut(s)	382, 1400, 1929
PpsI	GAGTC	3 cut(s)	382, 1400, 1929
PscI	ACATGT	1 cut(s)	1431
PshAI	GACNNNNGTC	1 cut(s)	1353
PshBI	ATTAAT	1 cut(s)	1644
PsiI	TTATAA	1 cut(s)	1794
Psp1406I	AACGTT	1 cut(s)	1871
Psp6I	CCWGG	3 cut(s)	510, 1098, 1330
PspFI	CCCAGC	1 cut(s)	1011
PspGI	CCWGG	3 cut(s)	510, 1098, 1330
PspN4I	GGNNCC	4 cut(s)	594, 1017, 1208, 1356
PspPI	GGNCC	4 cut(s)	625, 1206, 1355, 2061
PstI	CTGCAG	1 cut(s)	373
PstNI	CAGNNNCTG	1 cut(s)	265
PsuI	RGATCY	5 cut(s)	586, 721, 750, 1228, 1288
RsaI	GTAC	4 cut(s)	1066, 1166, 1283, 1929
RsaNI	GTAC	4 cut(s)	1065, 1165, 1282, 1928
RseI	CAYNNNNRTG	2 cut(s)	825, 1248
SapI	GCTCTTC	2 cut(s)	921, 1383
SatI	GCNGC	7 cut(s)	460, 496, 858, 1059, 1328, 1490, 2010
Sau3AI	GATC	9 cut(s)	438, 445, 586, 721, 750, 1228, 1288, 1573, 1681
Sau96I	GGNCC	4 cut(s)	625, 1206, 1355, 2061
SchI	GAGTC	3 cut(s)	382, 1400, 1929
ScrFI	CCNGG	3 cut(s)	512, 1100, 1332
SduI	GDGCHC	3 cut(s)	685, 990, 1881
SfaNI	GCATC	8 cut(s)	111, 271, 655, 741, 1045, 1176, 1429, 1955
SfcI	CTRYAG	1 cut(s)	369
SinI	GGWCC	3 cut(s)	625, 1355, 2061
SmiMI	CAYNNNNRTG	2 cut(s)	825, 1248
SmlI	CTYRAG	3 cut(s)	725, 1190, 1988
SmoI	CTYRAG	3 cut(s)	725, 1190, 1988
SpeI	ACTAGT	1 cut(s)	1822
SsiI	CCGC	8 cut(s)	106, 1238, 1328, 1442, 1464, 1747, 1946, 2012
SspI	AATATT	3 cut(s)	779, 1073, 1450
SspMI	CTAG	7 cut(s)	1062, 1277, 1293, 1506, 1619, 1676, 1823
StyD4I	CCNGG	3 cut(s)	510, 1098, 1330
StyI	CCWWGG	2 cut(s)	577, 1916
TaaI	ACNGT	6 cut(s)	188, 428, 530, 662, 673, 1587
TaiI	ACGT	2 cut(s)	540, 1874
TaqI	TCGA	5 cut(s)	352, 437, 990, 1092, 1911
TatI	WGTACW	4 cut(s)	1064, 1164, 1281, 1927
TauI	GCSGC	1 cut(s)	1330
TfiI	GAWTC	3 cut(s)	617, 902, 1984
TscAI	CASTG	3 cut(s)	44, 431, 1267
TseFI	GTSAC	3 cut(s)	707, 878, 1427
TseI	GCWGC	6 cut(s)	459, 495, 857, 1058, 1489, 2009
Tsp45I	GTSAC	3 cut(s)	707, 878, 1427
TspGWI	ACGGA	5 cut(s)	1399, 1674, 1900, 2039, 2053
TspRI	CASTG	3 cut(s)	44, 431, 1267
Vha464I	CTTAAG	1 cut(s)	1190
VpaK11BI	GGWCC	3 cut(s)	625, 1355, 2061
VspI	ATTAAT	1 cut(s)	1644
XapI	RAATTY	8 cut(s)	306, 504, 542, 757, 1253, 1561, 1799, 1901
XbaI	TCTAGA	1 cut(s)	1276
XceI	RCATGY	1 cut(s)	1435
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1026, 1096
XspI	CTAG	7 cut(s)	1062, 1277, 1293, 1506, 1619, 1676, 1823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.