Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0004714

Physical Location & Seq

Genomic Coordinates Forward (+)

1499398 .. 1504584

Gene Structure 5187 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G001730.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2706 bp

ATGCAAGTTCTGAGAGTGGAAGAAGGAAGGCCGGGCCAATATAGTGATAGAGACATTGGTTCCGGCTCGAGAGAATTCTCGGAGTTACTGGAGCATGAAAAGGAGGAGCTGCTGCAGGACCAATCAGAAGAGGATGAGAAGGACAATGGTCGCTTACAGAGGACCGGAACTAAGAAGAGACGGTTTAGTACAGAAATTGGAGCTTCAAATGGAAAAAGAATTAGAAAAAAGCAACTTGCCTCAAACTATTATGAAGATGCAGATGAGTTAATGGATGAAATGGAGCATGACACAGAAATTGCCTTTATGATCAAGTCAAAAGCACGGAGAAGGGGAAGTCCTGGCCGTGGAAAGATCAACAGGAGTTGCTCAGTGGATTCAGGAGTTAAAGATGAGTCAAAGAATGCTACTTCTTATACTTCGTCTTCTTCACCACCATCTTCTCCGAATTCATCAGTTTCAGTTCTAAGATGGGATCGTGGTAGATGCACTTCAAGACACATAAAGCAGCAGGATAATGGAGATGTTTGTTTTAAGTGTCATCAGTGTATGCAAGAATCAAAAACTATTGTTTCTTGCTCCAAGTGTGAAAACAACTCTTATTGTATCCGTTGTATCAAGGAATGGTATCCTCACATGAAGGTACAGGATGTCAAGGAACTTTGCCCATTTTGCCGCAGAAATTGCAACTGTAATGCTTGCCTCCACTCAACTGGCATGATTAAGACACCAAAACGGGACATAAGCGACTATGAAAAGGCTCAGCATTTGGCGCATTTAATTCGCTCCATGCTTCCATTTCTGAAGGAATTTTCTGATGAACAAAAGGAGGAGATACAGATTGAAGCTAATATTCAAGGAGAGTTGCTTTCCAACATTATAATAGAACAAACCCTCTGTTACAATGATGAGCGTGTCTATTGCAACCACTGTGCAACTTCAATTGTTGATCTGCATCGAAGCTGCCCTAAATGTCTATATGAACTATGTCTAAGTTGTTGTAGAGAAATTAGGCAGGGATGCCTTTTAGACCGTGCAGAGGTGAAGTTTCAATATAGGAATATGGGCTGCGAGTACATTCATGGTGGAGATCCATCACCTGAATGTTGTTCCTTAGAAGCTCCAGACAATCATATTGAGCCTTTGACTGGGTGGAATGAGCCTTTGACTGGGTGGAGTGCAAATGATGATAATAGTATTACTTGTGCTCCAAAGGAAATGGGTGGCTGCGGTGAGAGCAACTTGGCTCTGAAGCGAATCCTTCCTTGTGATTGGATTGCAAGTTTAGAAGCAAAAGCCACAACTGTACTAGACATTTGCGAAACCAAATACTGTACCTTCAAGCATGAATGTGGTGAAAGAAGAATTGATATGTTGCGAAAGGCAGCTTCTAGGGAGGATTCTTGTGACAACTCTTTATATTGTCCAGATTCAAGGGACACTCTGAAAGAAGGAGATCTTTTGCACTTCAGAAAACATTGGATTAATGGTGAACCAGTCATAGTTCAAAATGTACTTGAACAGGCAAATGGTCTGAGCTGGGAGCCAATGGTCATGTGGCGTGCTTTAAGTGAAAATATGGATCCAAATAGTACCTCACAATTTTCAGAGGTCAAGACCATTGATTGCCTGGCTGGCTGTGAGGTGGAAATAAATACTCGGCAATTTTTTGAAGGATATACGGAAGGAAGAATGTATGGAAATTTGTGGCCAGAGATGCTTAAGCTAAAGGATTGGCCCCCTTCTGATAAGTTTGAGAATCTTTTGCCCCGACATTGTGATGAATTTATTACTGCCTTGCCATTTCAAGAGTACACAGATCCTAGAGCTGGACTTCTTAACCTTGCTGTTAAGTTGCCACCTGGAGTCTTGAAACCAGACATGGGTCCAAAAACATATATTGCTTATGGGCTTGTGGAAGAGCTTGGAAGAGGGGATTCCGTAACCAAGCTGCATTGTGATATGTCTGATGCGGTTAATATTTTGACACATACAGCAGAAATAAAGCTAGGTGATGAGCAGAAATCGGCAATTTCAATGCTAAAAGAATTACATAGAGCCCAAGATGAGAGAGAGCTTCAGAATTGGGTGAATTCTCAGTCTGGACAGTCTGGAGCACAGATAGGGAATGATGAAGAAATCATAGAAAAGAATTACAATAGGGAATTGAAGGTTCCAGAAGATGATGCAGATGGGCCCACTCTTTCTGGTTCTCCCTGCACGGAAGCAGTAGAGGAAACCGGTGGTGCTTTGTGGGACATTTTCCGCAGGGAAGATGTCCCTAAGTTAGAGGCTTATCTGAAGAAGCACTATAAAGAATTCAGGCACACTTACTGTTCGTTAGTTGAACGAGTTATTCATCCAATTCATGATCAATCCTTTTATTTGACAATGGATCACAAAAGGAAGCTTAAGGAAGAATTTGGAGTCGAACCCTGGACATTTGTACAAAGCCTTGGAGAGGCTGTATTTATACCTGCTGGATGCCCACACCAAGTTAGGAATCTCAAGTCTTGTACAAAAGTAGCTGTAGACTTTGTATCCCCAGAAAATGTCCATGAGTGCCTCCGTTTAACTAAGGACTTCAGACAGCTTCCCAAGAATCATAGAGCTAGAGAGGACAAACTTGAGATAAAGAAAATGATACTATATGCGGTCGACCAAGCTGTTAAGGATTTGGAAGCCTTGGTAGCAACTCAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

JmjC zf-4CXXC_R1

Protein Analysis

901

Amino Acids

102.83

Weight (kDa)

5.55

Isoelectric Point (pI)

54.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC	PF02373	732 - 846	8.9e-15	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0004714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11950 AT1G11950 AT1G11950 AT1G62310
fragaria_vesca	FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550
malus_domestica	MD05G1351300.v1.1 MD10G1325700.v1.1
prunus_persica	Prupe.4G016300_v2.0.a1
pyrus_communis	pycom05g31840 pycom10g27540
rosa_chinensis	RchiOBHm_Chr5g0002371
rosa_laevigata	RLG00000031023
rosa_multiflora	Rmu_co8351855.1_g000001 Rmu_co8445921.1_g000001 Rmu_sc0006137.1_g000004 Rmu_sc0006137.1_g000005 Rmu_sc0017945.1_g000004
rosa_rugosa	Rorug04G0395600 Rorug04G0395700.1
rosa_samantha	Rh5AG018400 Rh5BG021100 Rh5CG020300 Rh5DG019300
rosa_wichuraiana	Rw5G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	881
Acc36I	ACCTGC	1 cut(s)	2485
AccI	GTMKAC	2 cut(s)	2532, 2658
AciI	CCGC	5 cut(s)	676, 1230, 1973, 2266, 2654
AclWI	GGATC	6 cut(s)	483, 1085, 1577, 1590, 1814, 2403
AcoI	YGGCCR	2 cut(s)	343, 1709
AcsI	RAATTY	8 cut(s)	74, 448, 809, 1702, 1784, 2092, 2318, 2420
AcuI	CTGAAG	6 cut(s)	824, 1271, 1453, 2063, 2321, 2569
AfiI	CCNNNNNNNGG	7 cut(s)	347, 1039, 1148, 1169, 1829, 1883, 2461
AflII	CTTAAG	2 cut(s)	1721, 2411
AgeI	ACCGGT	1 cut(s)	2240
AjnI	CCWGG	4 cut(s)	340, 1629, 1861, 2435
Alw21I	GWGCWC	2 cut(s)	1210, 2119
Alw26I	GTCTC	2 cut(s)	45, 172
AlwI	GGATC	6 cut(s)	483, 1085, 1577, 1590, 1814, 2403
Ama87I	CYCGRG	1 cut(s)	67
AoxI	GGCC	6 cut(s)	29, 34, 343, 1709, 1736, 2195
ApaI	GGGCCC	1 cut(s)	2199
ApeKI	GCWGC	8 cut(s)	109, 112, 508, 963, 1068, 1227, 1385, 1951
ApoI	RAATTY	8 cut(s)	74, 448, 809, 1702, 1784, 2092, 2318, 2420
AseI	ATTAAT	1 cut(s)	1485
AsiGI	ACCGGT	1 cut(s)	2240
AspLEI	GCGC	1 cut(s)	775
AspS9I	GGNCC	7 cut(s)	34, 118, 162, 1737, 1886, 2195, 2196
AsuC2I	CCSGG	1 cut(s)	33
AsuHPI	GGTGA	8 cut(s)	423, 1054, 1089, 1244, 1367, 1502, 2024, 2101
AvaI	CYCGRG	1 cut(s)	67
AvaII	GGWCC	3 cut(s)	118, 162, 1886
BaeGI	GKGCMC	1 cut(s)	2199
BalI	TGGCCA	1 cut(s)	1711
BamHI	GGATCC	1 cut(s)	1582
BanII	GRGCYC	2 cut(s)	2062, 2199
BarI	GAAGNNNNNNTAC	2 cut(s)	475, 507
BbsI	GAAGAC	1 cut(s)	417
Bbv12I	GWGCWC	2 cut(s)	1210, 2119
BbvI	GCAGC	8 cut(s)	96, 99, 520, 950, 1055, 1214, 1397, 1938
BccI	CCATC	4 cut(s)	445, 465, 1102, 2186
BceAI	ACGGC	1 cut(s)	330
BcgI	CGANNNNNNTGC	2 cut(s)	764, 798
BciT130I	CCWGG	4 cut(s)	342, 1631, 1863, 2437
BciVI	GTATCC	3 cut(s)	617, 639, 2551
BclI	TGATCA	2 cut(s)	309, 2371
BcnI	CCSGG	1 cut(s)	33
BcoDI	GTCTC	2 cut(s)	45, 172
BfaI	CTAG	5 cut(s)	1310, 1392, 1824, 2009, 2613
BfmI	CTRYAG	2 cut(s)	113, 2529
BfrI	CTTAAG	2 cut(s)	1721, 2411
BfuAI	ACCTGC	1 cut(s)	2485
BfuI	GTATCC	3 cut(s)	617, 639, 2551
BglI	GCCNNNNNGGC	1 cut(s)	1635
BglII	AGATCT	1 cut(s)	1456
BisI	GCNGC	9 cut(s)	110, 113, 509, 676, 964, 1069, 1228, 1386, 1952
BlpI	GCTNAGC	1 cut(s)	762
BlsI	GCNGC	9 cut(s)	111, 114, 510, 677, 965, 1070, 1229, 1387, 1953
Bme1390I	CCNGG	5 cut(s)	33, 342, 1631, 1863, 2437
Bme18I	GGWCC	3 cut(s)	118, 162, 1886
BmeT110I	CYCGRG	1 cut(s)	67
BmgT120I	GGNCC	7 cut(s)	34, 118, 162, 1737, 1886, 2195, 2196
BmiI	GGNNCC	7 cut(s)	61, 1545, 1584, 1739, 1887, 2175, 2197
BmrFI	CCNGG	5 cut(s)	33, 342, 1631, 1863, 2437
BmrI	ACTGGG	2 cut(s)	1158, 1179
BmsI	GCATC	8 cut(s)	247, 476, 964, 1010, 1707, 1960, 2176, 2474
BmuI	ACTGGG	2 cut(s)	1158, 1179
BoxI	GACNNNNGTC	2 cut(s)	147, 1884
BpiI	GAAGAC	1 cut(s)	417
BpmI	CTGGAG	4 cut(s)	110, 1107, 1884, 2133
Bpu1102I	GCTNAGC	1 cut(s)	762
BpuEI	CTTGAG	3 cut(s)	2492, 2648, 2682
BpuMI	CCSGG	1 cut(s)	33
BsaBI	GATNNNNATC	1 cut(s)	954
BsaJI	CCNNGG	4 cut(s)	346, 2435, 2455, 2685
BsaWI	WCCGGW	2 cut(s)	164, 2240
BsaXI	ACNNNNNCTCC	4 cut(s)	1192, 1222, 2451, 2481
Bsc4I	CCNNNNNNNGG	7 cut(s)	347, 1039, 1148, 1169, 1829, 1883, 2461
Bse118I	RCCGGY	1 cut(s)	2240
Bse1I	ACTGG	5 cut(s)	93, 718, 1153, 1174, 1496
Bse8I	GATNNNNATC	1 cut(s)	954
BseBI	CCWGG	4 cut(s)	342, 1631, 1863, 2437
BseDI	CCNNGG	4 cut(s)	346, 2435, 2455, 2685
BseGI	GGATG	6 cut(s)	139, 280, 655, 1025, 2359, 2489
BseJI	GATNNNNATC	1 cut(s)	954
BseLI	CCNNNNNNNGG	7 cut(s)	347, 1039, 1148, 1169, 1829, 1883, 2461
BseMII	CTCAG	4 cut(s)	384, 776, 1526, 2111
BseNI	ACTGG	5 cut(s)	93, 718, 1153, 1174, 1496
BseRI	GAGGAG	2 cut(s)	119, 845
BseSI	GKGCMC	1 cut(s)	2199
BseXI	GCAGC	8 cut(s)	96, 99, 520, 950, 1055, 1214, 1397, 1938
BseYI	CCCAGC	1 cut(s)	1539
BsgI	GTGCAG	2 cut(s)	1056, 2203
Bsh1285I	CGRYCG	1 cut(s)	2658
BshFI	GGCC	6 cut(s)	31, 36, 345, 1711, 1738, 2197
BshTI	ACCGGT	1 cut(s)	2240
BsiEI	CGRYCG	1 cut(s)	2658
BsiHKAI	GWGCWC	2 cut(s)	1210, 2119
BsiHKCI	CYCGRG	1 cut(s)	67
BsiSI	CCGG	4 cut(s)	32, 63, 165, 2241
BslFI	GGGAC	4 cut(s)	752, 1451, 2264, 2270
BslI	CCNNNNNNNGG	7 cut(s)	347, 1039, 1148, 1169, 1829, 1883, 2461
BsmAI	GTCTC	2 cut(s)	45, 172
BsmBI	CGTCTC	1 cut(s)	172
BsmFI	GGGAC	4 cut(s)	752, 1451, 2264, 2270
BsmI	GAATGC	1 cut(s)	409
BsnI	GGCC	6 cut(s)	31, 36, 345, 1711, 1738, 2197
BsoBI	CYCGRG	1 cut(s)	67
Bsp120I	GGGCCC	1 cut(s)	2195
Bsp1286I	GDGCHC	4 cut(s)	1210, 2062, 2119, 2199
Bsp1407I	TGTACA	2 cut(s)	2446, 2516
Bsp1720I	GCTNAGC	1 cut(s)	762
BspACI	CCGC	5 cut(s)	676, 1230, 1973, 2266, 2654
BspANI	GGCC	6 cut(s)	31, 36, 345, 1711, 1738, 2197
BspCNI	CTCAG	4 cut(s)	383, 775, 1527, 2110
BspHI	TCATGA	1 cut(s)	2368
BspLI	GGNNCC	7 cut(s)	61, 1545, 1584, 1739, 1887, 2175, 2197
BspMAI	CTGCAG	1 cut(s)	117
BspMI	ACCTGC	1 cut(s)	2485
BspPI	GGATC	6 cut(s)	483, 1085, 1577, 1590, 1814, 2403
BspQI	GCTCTTC	1 cut(s)	1914
BspTI	CTTAAG	2 cut(s)	1721, 2411
BsrFI	RCCGGY	1 cut(s)	2240
BsrGI	TGTACA	2 cut(s)	2446, 2516
BsrI	ACTGG	5 cut(s)	93, 718, 1153, 1174, 1496
BssAI	RCCGGY	1 cut(s)	2240
BssECI	CCNNGG	4 cut(s)	346, 2435, 2455, 2685
BssT1I	CCWWGG	2 cut(s)	2455, 2685
Bst2UI	CCWGG	4 cut(s)	342, 1631, 1863, 2437
Bst4CI	ACNGT	8 cut(s)	183, 692, 932, 1034, 1306, 1334, 2109, 2336
Bst6I	CTCTTC	4 cut(s)	123, 170, 1914, 1924
BstAFI	CTTAAG	2 cut(s)	1721, 2411
BstAPI	GCANNNNNTGC	1 cut(s)	684
BstAUI	TGTACA	2 cut(s)	2446, 2516
BstC8I	GCNNGC	3 cut(s)	700, 1563, 1636
BstDSI	CCRYGG	1 cut(s)	346
BstENI	CCTNNNNNAGG	1 cut(s)	2459
BstF5I	GGATG	6 cut(s)	139, 280, 655, 1025, 2359, 2489
BstHHI	GCGC	1 cut(s)	775
BstMAI	GTCTC	2 cut(s)	45, 172
BstMCI	CGRYCG	1 cut(s)	2658
BstMWI	GCNNNNNNNGC	7 cut(s)	672, 684, 772, 1236, 1635, 1717, 2690
BstNI	CCWGG	4 cut(s)	342, 1631, 1863, 2437
BstPAI	GACNNNNGTC	2 cut(s)	147, 1884
BstSCI	CCNGG	5 cut(s)	31, 340, 1629, 1861, 2435
BstSFI	CTRYAG	2 cut(s)	113, 2529
BstSLI	GKGCMC	1 cut(s)	2199
BstV1I	GCAGC	8 cut(s)	96, 99, 520, 950, 1055, 1214, 1397, 1938
BstV2I	GAAGAC	1 cut(s)	417
BstX2I	RGATCY	4 cut(s)	1090, 1456, 1582, 1819
BstXI	CCANNNNNNTGG	1 cut(s)	713
BstYI	RGATCY	4 cut(s)	1090, 1456, 1582, 1819
BsuI	GTATCC	3 cut(s)	617, 639, 2551
BsuRI	GGCC	6 cut(s)	31, 36, 345, 1711, 1738, 2197
BtgI	CCRYGG	1 cut(s)	346
BtsCI	GGATG	6 cut(s)	139, 280, 655, 1025, 2359, 2489
BtsIMutI	CAGTG	3 cut(s)	378, 551, 928
BveI	ACCTGC	1 cut(s)	2485
Cac8I	GCNNGC	3 cut(s)	700, 1563, 1636
CciI	TCATGA	1 cut(s)	2368
CfoI	GCGC	1 cut(s)	775
Cfr10I	RCCGGY	1 cut(s)	2240
Cfr13I	GGNCC	7 cut(s)	34, 118, 162, 1737, 1886, 2195, 2196
CspAI	ACCGGT	1 cut(s)	2240
EaeI	YGGCCR	2 cut(s)	343, 1709
Eam1104I	CTCTTC	4 cut(s)	123, 170, 1914, 1924
EarI	CTCTTC	4 cut(s)	123, 170, 1914, 1924
Eco130I	CCWWGG	2 cut(s)	2455, 2685
Eco24I	GRGCYC	2 cut(s)	2062, 2199
Eco47I	GGWCC	3 cut(s)	118, 162, 1886
Eco57I	CTGAAG	6 cut(s)	824, 1271, 1453, 2063, 2321, 2569
Eco88I	CYCGRG	1 cut(s)	67
EcoNI	CCTNNNNNAGG	1 cut(s)	2459
EcoRI	GAATTC	4 cut(s)	74, 448, 2092, 2318
EcoRII	CCWGG	4 cut(s)	340, 1629, 1861, 2435
EcoT14I	CCWWGG	2 cut(s)	2455, 2685
EcoT38I	GRGCYC	2 cut(s)	2062, 2199
ErhI	CCWWGG	2 cut(s)	2455, 2685
Esp3I	CGTCTC	1 cut(s)	172
FalI	AAGNNNNNCTT	2 cut(s)	1443, 1475
FaqI	GGGAC	4 cut(s)	752, 1451, 2264, 2270
FbaI	TGATCA	2 cut(s)	309, 2371
FblI	GTMKAC	2 cut(s)	2532, 2658
Fnu4HI	GCNGC	9 cut(s)	110, 113, 509, 676, 964, 1069, 1228, 1386, 1952
FokI	GGATG	6 cut(s)	146, 287, 662, 1032, 2346, 2496
FriOI	GRGCYC	2 cut(s)	2062, 2199
Fsp4HI	GCNGC	9 cut(s)	110, 113, 509, 676, 964, 1069, 1228, 1386, 1952
FspBI	CTAG	5 cut(s)	1310, 1392, 1824, 2009, 2613
GlaI	GCGC	1 cut(s)	774
GluI	GCNGC	9 cut(s)	110, 113, 509, 676, 964, 1069, 1228, 1386, 1952
GsaI	CCCAGC	1 cut(s)	1543
GsuI	CTGGAG	4 cut(s)	110, 1107, 1884, 2133
HaeIII	GGCC	6 cut(s)	31, 36, 345, 1711, 1738, 2197
HapII	CCGG	4 cut(s)	32, 63, 165, 2241
HhaI	GCGC	1 cut(s)	775
Hin6I	GCGC	1 cut(s)	773
HinP1I	GCGC	1 cut(s)	773
HincII	GTYRAC	1 cut(s)	2659
HindII	GTYRAC	1 cut(s)	2659
HindIII	AAGCTT	1 cut(s)	2408
HpaII	CCGG	4 cut(s)	32, 63, 165, 2241
HphI	GGTGA	8 cut(s)	423, 1054, 1089, 1244, 1367, 1502, 2024, 2101
Hpy166II	GTNNAC	4 cut(s)	1493, 1815, 2533, 2659
Hpy8I	GTNNAC	4 cut(s)	1493, 1815, 2533, 2659
HpyCH4III	ACNGT	8 cut(s)	183, 692, 932, 1034, 1306, 1334, 2109, 2336
HpyF10VI	GCNNNNNNNGC	7 cut(s)	672, 684, 772, 1236, 1635, 1717, 2690
HspAI	GCGC	1 cut(s)	773
Ksp22I	TGATCA	2 cut(s)	309, 2371
LguI	GCTCTTC	1 cut(s)	1914
Lsp1109I	GCAGC	8 cut(s)	96, 99, 520, 950, 1055, 1214, 1397, 1938
LweI	GCATC	8 cut(s)	247, 476, 964, 1010, 1707, 1960, 2176, 2474
MaeI	CTAG	5 cut(s)	1310, 1392, 1824, 2009, 2613
MaeIII	GTNAC	4 cut(s)	84, 899, 1406, 1942
MfeI	CAATTG	1 cut(s)	942
MflI	RGATCY	4 cut(s)	1090, 1456, 1582, 1819
MhlI	GDGCHC	4 cut(s)	1210, 2062, 2119, 2199
MlsI	TGGCCA	1 cut(s)	1711
MluNI	TGGCCA	1 cut(s)	1711
MlyI	GAGTC	3 cut(s)	404, 1875, 2436
MmeI	TCCRAC	1 cut(s)	897
Mox20I	TGGCCA	1 cut(s)	1711
MscI	TGGCCA	1 cut(s)	1711
MslI	CAYNNNNRTG	3 cut(s)	1102, 1350, 1779
Msp20I	TGGCCA	1 cut(s)	1711
MspCI	CTTAAG	2 cut(s)	1721, 2411
MspI	CCGG	4 cut(s)	32, 63, 165, 2241
MspR9I	CCNGG	5 cut(s)	33, 342, 1631, 1863, 2437
MunI	CAATTG	1 cut(s)	942
Mva1269I	GAATGC	1 cut(s)	409
MvaI	CCWGG	4 cut(s)	342, 1631, 1863, 2437
MwoI	GCNNNNNNNGC	7 cut(s)	672, 684, 772, 1236, 1635, 1717, 2690
NciI	CCSGG	1 cut(s)	33
NlaIV	GGNNCC	7 cut(s)	61, 1545, 1584, 1739, 1887, 2175, 2197
NmeAIII	GCCGAG	1 cut(s)	1639
NmuCI	GTSAC	1 cut(s)	1406
PaeR7I	CTCGAG	1 cut(s)	67
PagI	TCATGA	1 cut(s)	2368
PciSI	GCTCTTC	1 cut(s)	1914
PctI	GAATGC	1 cut(s)	409
PfeI	GAWTC	9 cut(s)	377, 557, 1257, 1400, 1430, 1759, 1937, 2503, 2602
PinAI	ACCGGT	1 cut(s)	2240
PkrI	GCNGC	9 cut(s)	111, 114, 510, 677, 965, 1070, 1229, 1387, 1953
PleI	GAGTC	3 cut(s)	403, 1874, 2435
PpsI	GAGTC	3 cut(s)	403, 1874, 2435
PshAI	GACNNNNGTC	2 cut(s)	147, 1884
PshBI	ATTAAT	1 cut(s)	1485
PsiI	TTATAA	1 cut(s)	881
Psp6I	CCWGG	4 cut(s)	340, 1629, 1861, 2435
PspFI	CCCAGC	1 cut(s)	1539
PspGI	CCWGG	4 cut(s)	340, 1629, 1861, 2435
PspN4I	GGNNCC	7 cut(s)	61, 1545, 1584, 1739, 1887, 2175, 2197
PspOMI	GGGCCC	1 cut(s)	2195
PspPI	GGNCC	7 cut(s)	34, 118, 162, 1737, 1886, 2195, 2196
PstI	CTGCAG	1 cut(s)	117
PsuI	RGATCY	4 cut(s)	1090, 1456, 1582, 1819
RseI	CAYNNNNRTG	3 cut(s)	1102, 1350, 1779
SalI	GTCGAC	1 cut(s)	2657
SapI	GCTCTTC	1 cut(s)	1914
SatI	GCNGC	9 cut(s)	110, 113, 509, 676, 964, 1069, 1228, 1386, 1952
Sau96I	GGNCC	7 cut(s)	34, 118, 162, 1737, 1886, 2195, 2196
SchI	GAGTC	3 cut(s)	404, 1875, 2436
ScrFI	CCNGG	5 cut(s)	33, 342, 1631, 1863, 2437
SduI	GDGCHC	4 cut(s)	1210, 2062, 2119, 2199
SfaNI	GCATC	8 cut(s)	247, 476, 964, 1010, 1707, 1960, 2176, 2474
SfcI	CTRYAG	2 cut(s)	113, 2529
Sfr274I	CTCGAG	1 cut(s)	67
SinI	GGWCC	3 cut(s)	118, 162, 1886
SlaI	CTCGAG	1 cut(s)	67
SmiMI	CAYNNNNRTG	3 cut(s)	1102, 1350, 1779
SmlI	CTYRAG	6 cut(s)	67, 1721, 2411, 2507, 2627, 2697
SmoI	CTYRAG	6 cut(s)	67, 1721, 2411, 2507, 2627, 2697
SsiI	CCGC	5 cut(s)	676, 1230, 1973, 2266, 2654
SspI	AATATT	2 cut(s)	853, 1981
SspMI	CTAG	5 cut(s)	1310, 1392, 1824, 2009, 2613
StyD4I	CCNGG	5 cut(s)	31, 340, 1629, 1861, 2435
StyI	CCWWGG	2 cut(s)	2455, 2685
TaaI	ACNGT	8 cut(s)	183, 692, 932, 1034, 1306, 1334, 2109, 2336
TaqI	TCGA	4 cut(s)	68, 958, 2430, 2658
TatI	WGTACW	7 cut(s)	188, 1074, 1306, 1513, 1812, 2446, 2516
TauI	GCSGC	1 cut(s)	678
TfiI	GAWTC	9 cut(s)	377, 557, 1257, 1400, 1430, 1759, 1937, 2503, 2602
TscAI	CASTG	3 cut(s)	378, 551, 935
TseFI	GTSAC	1 cut(s)	1406
TseI	GCWGC	8 cut(s)	109, 112, 508, 963, 1068, 1227, 1385, 1951
Tsp45I	GTSAC	1 cut(s)	1406
TspGWI	ACGGA	6 cut(s)	340, 599, 1697, 1930, 2237, 2558
TspRI	CASTG	3 cut(s)	378, 551, 935
Vha464I	CTTAAG	2 cut(s)	1721, 2411
VpaK11BI	GGWCC	3 cut(s)	118, 162, 1886
VspI	ATTAAT	1 cut(s)	1485
XagI	CCTNNNNNAGG	1 cut(s)	2459
XapI	RAATTY	8 cut(s)	74, 448, 809, 1702, 1784, 2092, 2318, 2420
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1554, 1627
XhoI	CTCGAG	1 cut(s)	67
XmiI	GTMKAC	2 cut(s)	2532, 2658
XspI	CTAG	5 cut(s)	1310, 1392, 1824, 2009, 2613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.