Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0004714

Physical Location & Seq

Genomic Coordinates Reverse (-)

46832063 .. 46837369

Gene Structure 5307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1351300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2664 bp

ATGGAAGTTTTGCTAGTAGAACAAGGGCGGCTGGAGAGGTACAACAATAAAGGTACTAGGGTACATAAAAGAAGACGTTCCAATTTCCTTCATCATGAAAAGGGAGGCGGCAAATCAGAAGAGGATGAAAAGCACAAGGACTTGTCGTCACTGACAGGAACAGAGTCTAAGAAGAGACGGCTTACTCCAGAGAATGGAAAAAGGATTTCAAAAAAGCAACACTTCTCAAAAGTGGTAGAGAGTTCTGAAGATGAGTTTGATGGGGAAATTCTGTTTCTTGTTAAGGCACAGGCGCGCAAAAGGGGAAGAGTTGATTGTGAAGTGATAGGAAGAAGTTCCTTAAAGGATGAAGCAGTAAAATATGAATCAAATAATGCAGCTTGCAATACCTCCTCTTCTTCACCACTGACTTCGCCTGGATCATCGCCAAGATATGTGAAGGATAATGAAGAAGCTTATTTGAAGTGTCATCAGTGTATGAAAGAGGAGAAGAAAACCATTTTGTCCTGCTCCAAGTGTAAAATGAACTCCTATTGCATCCGCTGTATCAAGCAATGGTATCCCCACATGAAAGTAGAGGAAGTCAAGGAACTTTGCCCATTTTGCCTCCATAATTGCAACTGTAATGCATGCCTGCACTCAGCTGGTGTGATTAAGATACCAGAGAGGGATGTCGATAAGCGCAAAAAGGCTCAGCACCTGGAGCATTTAGTTTCCAACTTGCTTCCGTTTCTAAAGAAAATTTCTCAAGAGCAAACTCAGGAGATAGAGATTGAAGCTAATCTTCGAGGACTTTCACCTTCCAAAGTGGAAGTACCGCAGACTCTCTGTTTTAATGATGAGCGTGTCTATTGCAACCACTGTGCAACTTCAATCATTGATCTACACCGAAGCTGTTCAAAATGTTCGTATGAACTTTGTCTAAGTTGTTGCCGAGAAATTCGCCAAGGAAGCCTTTTAGACCGTGGAGAAGTGAAATTTCAGTATAGGAGTAGGGGTTATGATTATATCCATGGTGGAGAACCAGCATCTGATTGCTGTCCCTTAGAAAATTCAGAGGACCATATTGAACCTTTGATTGAGTGGAAGGCAAATGGTGATGCTACTGTTAGTTGTGCTCCGAAAGAAATGGGTGGCTGTGGTGAGTGCGTATTGGATCTCAAGCGCATCCTTCCGGGCTGCTGGATCTCAAATTTAGAAGTAAAAGCAAAATATTTATTAGAGATTTTCCAAAAAGAGCGTTCTACTTTCAAGCATGATTGTGAAACAGGAAGGGATATGTTACGAAAAGCAGCTTCTAGAGAAGGTTCTTGTGACAACTTCTTGTTTTGCCCTGATTCAAAGGACACTATGAAAGAAGAAGAGCTTTTGCACTTCAGAGAACATTGGGTGAATGGTGAACCAGTTATTGTTAAAAATGTGCTCGAACAGGCAAATGGTTTGAGCTGGGAGCCAATGGTAATGTGGCGTGCTTTAAGTGAAAATAAAGATGCATCTAGTACACAATATTCAGAAGTAAAGACCATCGATTGCCTGGCTGGTTGTGAGGTGGAAATCAACACTCGTGATTTTTTTGAAGGATACACTGAAGGGAGAATGTACAAAAATTCGTGGCCAGAGATGCTTAAGCTTAAGGATTGGCCGCCCTCTGATAAGTTTGAGGATCTTTTACCGCGTCATTGTGATGAATTTATCAGTGCCTTACCATTTCGAGAGTATACAGATCCTAGAGCTGGTATACTTAACCTTGCTGTTAAGTTGCCACCAGGTGTCTTGAAACCAGACATGGGTCCAAAAACATATATTGCTTATGGTTTTCTGGAAGAGCTTGGAAGAGGAGACTCCGTAACTAAGCTCCATTGTGATATGTCTGATGCGGTGAATATTTTGACACATACTGCTGAAGTGAATTTAAGTAATGAGCAGCAGTCTGCAATTTCTGGGTTGAAAAGGTTGCATAGGGTGCAAGATGAAAGGGAGCTTATGGATTGGGAGAATTCTCACAAGGATCATGCTGGACAGTCTGGCGGAAAGACAGAGGACAGAGAAATCACAGAAAGCAATCGCCCATCTGAAACTAATGGAGAATTGAAAGTTCGAAAAGATGAACTAGATGAGCCGTTTTGTTCTTCCTCTAATGAAGAAACCGAGGAAACGGGTGGTGCTTTGTGGGACATCTTTCGCAGGGAGGACGTCCCTAAGTTAGAGGCTTATCTGATGAAGCATTATAAAGAATTTAGGCACACCTATTGTTCACTAGTTGAAAAGGTCATTCATCCAATTCATGACCAATCTTTTTATTTAACGTTGGAGCACAAACAGAGGCTGAAGGAGGAATTTGGCGTCGAACCATGGACTTTTGTACAAAGACTCGGAGAGGCAGTATTTATTCCAGCCGGATGCCCACACCAAGTCAGGAATCTCAAGTCCTGTACGAAAGTAGCAGCAGACTTCGTATCTCCTGAAAATGTCCATGAGTGCCTCCGTTTAACTGAGGAGTTCAGACAACTTCCGAAGAACCACAGAGCCAGAGAAGACAAACTTGAGATAAAGAAGATGATACTTTACGCAGTCGATCAAGCTGTTAAAGATTTGGAATCCTTAGTATCGATTCAAGAGTTGGAAGCCTTGATATCAACTCGAGCTTTGAAGGCTTTGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

JmjC zf-4CXXC_R1

Protein Analysis

888

Amino Acids

101.73

Weight (kDa)

6.07

Isoelectric Point (pI)

54.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC	PF02373	715 - 818	6.7e-14	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11950 AT1G11950 AT1G11950 AT1G62310
fragaria_vesca	FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550
malus_domestica	MD05G1351300.v1.1 MD10G1325700.v1.1
prunus_persica	Prupe.4G016300_v2.0.a1
pyrus_communis	pycom05g31840 pycom10g27540
rosa_chinensis	RchiOBHm_Chr5g0002371
rosa_laevigata	RLG00000031023
rosa_multiflora	Rmu_co8351855.1_g000001 Rmu_co8445921.1_g000001 Rmu_sc0006137.1_g000004 Rmu_sc0006137.1_g000005 Rmu_sc0017945.1_g000004
rosa_rugosa	Rorug04G0395600 Rorug04G0395700.1
rosa_samantha	Rh5AG018400 Rh5BG021100 Rh5CG020300 Rh5DG019300
rosa_wichuraiana	Rw5G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2229
AatII	GACGTC	1 cut(s)	2196
AccB7I	CCANNNNNTGG	1 cut(s)	194
AccI	GTMKAC	2 cut(s)	1718, 1738
AccII	CGCG	2 cut(s)	295, 1675
AciI	CCGC	8 cut(s)	28, 108, 541, 818, 1643, 1673, 1877, 2028
AclI	AACGTT	1 cut(s)	2306
AclWI	GGATC	6 cut(s)	427, 1164, 1193, 1671, 1718, 2016
AcoI	YGGCCR	2 cut(s)	1613, 1640
AcuI	CTGAAG	5 cut(s)	267, 1360, 1608, 1923, 2348
AcyI	GRCGYC	2 cut(s)	2193, 2343
AdeI	CACNNNGTG	1 cut(s)	1769
AfaI	GTAC	8 cut(s)	41, 55, 63, 816, 1501, 1601, 2364, 2434
AfiI	CCNNNNNNNGG	3 cut(s)	194, 1733, 1787
AflII	CTTAAG	2 cut(s)	1625, 1631
AhdI	GACNNNNNGTC	1 cut(s)	145
AhlI	ACTAGT	1 cut(s)	2257
AjnI	CCWGG	4 cut(s)	415, 699, 1533, 1765
Alw21I	GWGCWC	3 cut(s)	1120, 1425, 2316
Alw26I	GTCTC	2 cut(s)	169, 1833
AlwI	GGATC	6 cut(s)	427, 1164, 1193, 1671, 1718, 2016
AlwNI	CAGNNNCTG	3 cut(s)	700, 1031, 2326
Ama87I	CYCGRG	1 cut(s)	2640
AoxI	GGCC	2 cut(s)	1613, 1640
ApeKI	GCWGC	5 cut(s)	377, 1179, 1292, 1924, 2444
Asp700I	GAANNNNTTC	3 cut(s)	76, 334, 895
AspLEI	GCGC	4 cut(s)	295, 297, 684, 1167
AspS9I	GGNCC	2 cut(s)	1060, 1790
AsuC2I	CCSGG	1 cut(s)	1176
AsuHPI	GGTGA	7 cut(s)	393, 789, 1109, 1154, 1402, 1409, 1891
AsuII	TTCGAA	1 cut(s)	2098
AvaI	CYCGRG	1 cut(s)	2640
AvaII	GGWCC	2 cut(s)	1060, 1790
BaeI	ACNNNNGTAYC	2 cut(s)	45, 78
BalI	TGGCCA	1 cut(s)	1615
BauI	CACGAG	1 cut(s)	1563
BbsI	GAAGAC	2 cut(s)	79, 2541
Bbv12I	GWGCWC	3 cut(s)	1120, 1425, 2316
BbvI	GCAGC	5 cut(s)	389, 1166, 1304, 1936, 2456
BccI	CCATC	3 cut(s)	254, 1532, 2077
BceAI	ACGGC	2 cut(s)	194, 2104
BciT130I	CCWGG	4 cut(s)	417, 701, 1535, 1767
BciVI	GTATCC	2 cut(s)	570, 1574
BcnI	CCSGG	1 cut(s)	1176
BcoDI	GTCTC	2 cut(s)	169, 1833
BcuI	ACTAGT	1 cut(s)	2257
BfaI	CTAG	7 cut(s)	14, 57, 1299, 1497, 1728, 2111, 2258
BfrI	CTTAAG	2 cut(s)	1625, 1631
BfuI	GTATCC	2 cut(s)	570, 1574
BisI	GCNGC	8 cut(s)	29, 109, 378, 1180, 1293, 1643, 1925, 2445
BlpI	GCTNAGC	1 cut(s)	693
BlsI	GCNGC	8 cut(s)	30, 110, 379, 1181, 1294, 1644, 1926, 2446
Bme1390I	CCNGG	5 cut(s)	417, 701, 1176, 1535, 1767
Bme18I	GGWCC	2 cut(s)	1060, 1790
BmeRI	GACNNNNNGTC	1 cut(s)	145
BmeT110I	CYCGRG	1 cut(s)	2640
BmgT120I	GGNCC	2 cut(s)	1060, 1790
BmiI	GGNNCC	2 cut(s)	1452, 1791
BmrFI	CCNGG	5 cut(s)	417, 701, 1176, 1535, 1767
BmsI	GCATC	9 cut(s)	546, 1037, 1090, 1176, 1480, 1502, 1611, 1864, 2390
BoxI	GACNNNNGTC	1 cut(s)	1788
BpiI	GAAGAC	2 cut(s)	79, 2541
BpmI	CTGGAG	3 cut(s)	53, 171, 722
Bpu1102I	GCTNAGC	1 cut(s)	693
Bpu14I	TTCGAA	1 cut(s)	2098
BpuEI	CTTGAG	4 cut(s)	732, 1145, 2408, 2564
BpuMI	CCSGG	1 cut(s)	1176
Bsa29I	ATCGAT	2 cut(s)	1527, 2609
BsaHI	GRCGYC	2 cut(s)	2193, 2343
BsaJI	CCNNGG	5 cut(s)	946, 964, 1012, 2148, 2351
BsaXI	ACNNNNNCTCC	6 cut(s)	982, 1012, 1830, 1860, 2367, 2397
Bsc4I	CCNNNNNNNGG	3 cut(s)	194, 1733, 1787
Bse1I	ACTGG	1 cut(s)	1403
Bse3DI	GCAATG	1 cut(s)	560
BseBI	CCWGG	4 cut(s)	417, 701, 1535, 1767
BseCI	ATCGAT	2 cut(s)	1527, 2609
BseDI	CCNNGG	5 cut(s)	946, 964, 1012, 2148, 2351
BseGI	GGATG	7 cut(s)	130, 352, 537, 676, 1167, 2275, 2405
BseLI	CCNNNNNNNGG	3 cut(s)	194, 1733, 1787
BseMI	GCAATG	1 cut(s)	560
BseMII	CTCAG	4 cut(s)	654, 707, 773, 2484
BseNI	ACTGG	1 cut(s)	1403
BsePI	GCGCGC	1 cut(s)	293
BseRI	GAGGAG	4 cut(s)	382, 500, 1851, 2510
BseXI	GCAGC	5 cut(s)	389, 1166, 1304, 1936, 2456
BseYI	CCCAGC	1 cut(s)	1446
BsgI	GTGCAG	1 cut(s)	620
Bsh1236I	CGCG	2 cut(s)	295, 1675
BshFI	GGCC	2 cut(s)	1615, 1642
BshVI	ATCGAT	2 cut(s)	1527, 2609
BsiHKAI	GWGCWC	3 cut(s)	1120, 1425, 2316
BsiHKCI	CYCGRG	1 cut(s)	2640
BsiSI	CCGG	2 cut(s)	1175, 2397
BslFI	GGGAC	3 cut(s)	1026, 2180, 2186
BslI	CCNNNNNNNGG	3 cut(s)	194, 1733, 1787
BsmAI	GTCTC	2 cut(s)	169, 1833
BsmBI	CGTCTC	1 cut(s)	169
BsmFI	GGGAC	3 cut(s)	1026, 2180, 2186
BsnI	GGCC	2 cut(s)	1615, 1642
BsoBI	CYCGRG	1 cut(s)	2640
Bsp119I	TTCGAA	1 cut(s)	2098
Bsp1286I	GDGCHC	3 cut(s)	1120, 1425, 2316
Bsp1407I	TGTACA	2 cut(s)	1599, 2362
Bsp143I	GATC	8 cut(s)	419, 880, 1156, 1185, 1663, 1723, 2008, 2575
Bsp1720I	GCTNAGC	1 cut(s)	693
Bsp19I	CCATGG	2 cut(s)	1012, 2351
BspACI	CCGC	8 cut(s)	28, 108, 541, 818, 1643, 1673, 1877, 2028
BspANI	GGCC	2 cut(s)	1615, 1642
BspCNI	CTCAG	4 cut(s)	653, 706, 772, 2485
BspDI	ATCGAT	2 cut(s)	1527, 2609
BspFNI	CGCG	2 cut(s)	295, 1675
BspHI	TCATGA	2 cut(s)	94, 2284
BspLI	GGNNCC	2 cut(s)	1452, 1791
BspPI	GGATC	6 cut(s)	427, 1164, 1193, 1671, 1718, 2016
BspQI	GCTCTTC	2 cut(s)	1356, 1818
BspT104I	TTCGAA	1 cut(s)	2098
BspTI	CTTAAG	2 cut(s)	1625, 1631
BsrDI	GCAATG	1 cut(s)	560
BsrGI	TGTACA	2 cut(s)	1599, 2362
BsrI	ACTGG	1 cut(s)	1403
BssECI	CCNNGG	5 cut(s)	946, 964, 1012, 2148, 2351
BssHII	GCGCGC	1 cut(s)	293
BssMI	GATC	8 cut(s)	419, 880, 1156, 1185, 1663, 1723, 2008, 2575
BssNAI	GTATAC	2 cut(s)	1719, 1739
BssNI	GRCGYC	2 cut(s)	2193, 2343
BssSI	CACGAG	1 cut(s)	1563
BssT1I	CCWWGG	3 cut(s)	946, 1012, 2351
Bst1107I	GTATAC	2 cut(s)	1719, 1739
Bst2BI	CACGAG	1 cut(s)	1563
Bst2UI	CCWGG	4 cut(s)	417, 701, 1535, 1767
Bst4CI	ACNGT	5 cut(s)	623, 863, 965, 1108, 2022
Bst6I	CTCTTC	7 cut(s)	114, 167, 301, 400, 1356, 1818, 1828
BstACI	GRCGYC	2 cut(s)	2193, 2343
BstAFI	CTTAAG	2 cut(s)	1625, 1631
BstAPI	GCANNNNNTGC	1 cut(s)	1963
BstAUI	TGTACA	2 cut(s)	1599, 2362
BstBI	TTCGAA	1 cut(s)	2098
BstC8I	GCNNGC	5 cut(s)	295, 382, 631, 635, 1470
BstDSI	CCRYGG	3 cut(s)	964, 1012, 2351
BstF5I	GGATG	7 cut(s)	130, 352, 537, 676, 1167, 2275, 2405
BstFNI	CGCG	2 cut(s)	295, 1675
BstHHI	GCGC	4 cut(s)	295, 297, 684, 1167
BstKTI	GATC	8 cut(s)	422, 883, 1159, 1188, 1666, 1726, 2011, 2578
BstMAI	GTCTC	2 cut(s)	169, 1833
BstMBI	GATC	8 cut(s)	419, 880, 1156, 1185, 1663, 1723, 2008, 2575
BstMWI	GCNNNNNNNGC	6 cut(s)	603, 703, 951, 1621, 1963, 2651
BstNI	CCWGG	4 cut(s)	417, 701, 1535, 1767
BstNSI	RCATGY	1 cut(s)	633
BstPAI	GACNNNNGTC	1 cut(s)	1788
BstSCI	CCNGG	5 cut(s)	415, 699, 1174, 1533, 1765
BstUI	CGCG	2 cut(s)	295, 1675
BstV1I	GCAGC	5 cut(s)	389, 1166, 1304, 1936, 2456
BstV2I	GAAGAC	2 cut(s)	79, 2541
BstX2I	RGATCY	4 cut(s)	1156, 1185, 1663, 1723
BstYI	RGATCY	4 cut(s)	1156, 1185, 1663, 1723
BstZ17I	GTATAC	2 cut(s)	1719, 1739
Bsu15I	ATCGAT	2 cut(s)	1527, 2609
BsuI	GTATCC	2 cut(s)	570, 1574
BsuRI	GGCC	2 cut(s)	1615, 1642
BsuTUI	ATCGAT	2 cut(s)	1527, 2609
BtgI	CCRYGG	3 cut(s)	964, 1012, 2351
BtgZI	GCGATG	1 cut(s)	408
BtsCI	GGATG	7 cut(s)	130, 352, 537, 676, 1167, 2275, 2405
BtsIMutI	CAGTG	6 cut(s)	149, 404, 479, 859, 1584, 1702
Cac8I	GCNNGC	5 cut(s)	295, 382, 631, 635, 1470
CaiI	CAGNNNCTG	3 cut(s)	700, 1031, 2326
CciI	TCATGA	2 cut(s)	94, 2284
CfoI	GCGC	4 cut(s)	295, 297, 684, 1167
Cfr13I	GGNCC	2 cut(s)	1060, 1790
ClaI	ATCGAT	2 cut(s)	1527, 2609
CseI	GACGC	2 cut(s)	1664, 2332
CsiI	ACCWGGT	1 cut(s)	1765
Csp6I	GTAC	8 cut(s)	40, 54, 62, 815, 1500, 1600, 2363, 2433
CviQI	GTAC	8 cut(s)	40, 54, 62, 815, 1500, 1600, 2363, 2433
DpnI	GATC	8 cut(s)	421, 882, 1158, 1187, 1665, 1725, 2010, 2577
DpnII	GATC	8 cut(s)	419, 880, 1156, 1185, 1663, 1723, 2008, 2575
DraIII	CACNNNGTG	1 cut(s)	1769
DriI	GACNNNNNGTC	1 cut(s)	145
EaeI	YGGCCR	2 cut(s)	1613, 1640
Eam1104I	CTCTTC	7 cut(s)	114, 167, 301, 400, 1356, 1818, 1828
Eam1105I	GACNNNNNGTC	1 cut(s)	145
EarI	CTCTTC	7 cut(s)	114, 167, 301, 400, 1356, 1818, 1828
EciI	GGCGGA	1 cut(s)	2043
Eco130I	CCWWGG	3 cut(s)	946, 1012, 2351
Eco32I	GATATC	1 cut(s)	2634
Eco47I	GGWCC	2 cut(s)	1060, 1790
Eco57I	CTGAAG	5 cut(s)	267, 1360, 1608, 1923, 2348
Eco88I	CYCGRG	1 cut(s)	2640
EcoRI	GAATTC	1 cut(s)	1996
EcoRII	CCWGG	4 cut(s)	415, 699, 1533, 1765
EcoRV	GATATC	1 cut(s)	2634
EcoT14I	CCWWGG	3 cut(s)	946, 1012, 2351
EcoT22I	ATGCAT	2 cut(s)	631, 1495
ErhI	CCWWGG	3 cut(s)	946, 1012, 2351
Esp3I	CGTCTC	1 cut(s)	169
FaqI	GGGAC	3 cut(s)	1026, 2180, 2186
FblI	GTMKAC	2 cut(s)	1718, 1738
Fnu4HI	GCNGC	8 cut(s)	29, 109, 378, 1180, 1293, 1643, 1925, 2445
FokI	GGATG	7 cut(s)	137, 359, 524, 683, 1154, 2262, 2412
Fsp4HI	GCNGC	8 cut(s)	29, 109, 378, 1180, 1293, 1643, 1925, 2445
FspBI	CTAG	7 cut(s)	14, 57, 1299, 1497, 1728, 2111, 2258
GlaI	GCGC	4 cut(s)	294, 296, 683, 1166
GluI	GCNGC	8 cut(s)	29, 109, 378, 1180, 1293, 1643, 1925, 2445
GsaI	CCCAGC	1 cut(s)	1450
GsuI	CTGGAG	3 cut(s)	53, 171, 722
HaeIII	GGCC	2 cut(s)	1615, 1642
HapII	CCGG	2 cut(s)	1175, 2397
HgaI	GACGC	2 cut(s)	1664, 2332
HhaI	GCGC	4 cut(s)	295, 297, 684, 1167
Hin1I	GRCGYC	2 cut(s)	2193, 2343
Hin6I	GCGC	4 cut(s)	293, 295, 682, 1165
HinP1I	GCGC	4 cut(s)	293, 295, 682, 1165
HindIII	AAGCTT	2 cut(s)	453, 1628
HinfI	GANTC	9 cut(s)	164, 365, 823, 1337, 1841, 2370, 2419, 2597, 2611
HpaII	CCGG	2 cut(s)	1175, 2397
HphI	GGTGA	7 cut(s)	393, 789, 1109, 1154, 1402, 1409, 1891
Hpy166II	GTNNAC	5 cut(s)	1400, 1502, 1719, 1739, 2255
Hpy8I	GTNNAC	5 cut(s)	1400, 1502, 1719, 1739, 2255
Hpy99I	CGWCG	1 cut(s)	2348
HpyCH4III	ACNGT	5 cut(s)	623, 863, 965, 1108, 2022
HpyCH4IV	ACGT	3 cut(s)	76, 2193, 2306
HpyF10VI	GCNNNNNNNGC	6 cut(s)	603, 703, 951, 1621, 1963, 2651
HpySE526I	ACGT	3 cut(s)	76, 2193, 2306
Hsp92I	GRCGYC	2 cut(s)	2193, 2343
HspAI	GCGC	4 cut(s)	293, 295, 682, 1165
Kzo9I	GATC	8 cut(s)	419, 880, 1156, 1185, 1663, 1723, 2008, 2575
LguI	GCTCTTC	2 cut(s)	1356, 1818
LmnI	GCTCC	7 cut(s)	515, 703, 1123, 1450, 1860, 1978, 2311
Lsp1109I	GCAGC	5 cut(s)	389, 1166, 1304, 1936, 2456
LweI	GCATC	9 cut(s)	546, 1037, 1090, 1176, 1480, 1502, 1611, 1864, 2390
MabI	ACCWGGT	1 cut(s)	1765
MaeI	CTAG	7 cut(s)	14, 57, 1299, 1497, 1728, 2111, 2258
MaeII	ACGT	3 cut(s)	76, 2193, 2306
MaeIII	GTNAC	4 cut(s)	147, 1281, 1313, 1846
MalI	GATC	8 cut(s)	421, 882, 1158, 1187, 1665, 1725, 2010, 2577
MboI	GATC	8 cut(s)	419, 880, 1156, 1185, 1663, 1723, 2008, 2575
MflI	RGATCY	4 cut(s)	1156, 1185, 1663, 1723
MhlI	GDGCHC	3 cut(s)	1120, 1425, 2316
MlsI	TGGCCA	1 cut(s)	1615
MluNI	TGGCCA	1 cut(s)	1615
MlyI	GAGTC	4 cut(s)	173, 817, 1835, 2364
MmeI	TCCRAC	3 cut(s)	741, 2289, 2601
Mox20I	TGGCCA	1 cut(s)	1615
Mph1103I	ATGCAT	2 cut(s)	631, 1495
MroXI	GAANNNNTTC	3 cut(s)	76, 334, 895
MscI	TGGCCA	1 cut(s)	1615
MslI	CAYNNNNRTG	2 cut(s)	1260, 1683
Msp20I	TGGCCA	1 cut(s)	1615
MspA1I	CMGCKG	2 cut(s)	543, 644
MspCI	CTTAAG	2 cut(s)	1625, 1631
MspI	CCGG	2 cut(s)	1175, 2397
MspR9I	CCNGG	5 cut(s)	417, 701, 1176, 1535, 1767
MvaI	CCWGG	4 cut(s)	417, 701, 1535, 1767
MvnI	CGCG	2 cut(s)	295, 1675
MwoI	GCNNNNNNNGC	6 cut(s)	603, 703, 951, 1621, 1963, 2651
NciI	CCSGG	1 cut(s)	1176
NcoI	CCATGG	2 cut(s)	1012, 2351
NdeII	GATC	8 cut(s)	419, 880, 1156, 1185, 1663, 1723, 2008, 2575
NlaIV	GGNNCC	2 cut(s)	1452, 1791
NmeAIII	GCCGAG	1 cut(s)	959
NmuCI	GTSAC	2 cut(s)	147, 1313
NsiI	ATGCAT	2 cut(s)	631, 1495
NspI	RCATGY	1 cut(s)	633
NspV	TTCGAA	1 cut(s)	2098
PaeI	GCATGC	1 cut(s)	633
PaeR7I	CTCGAG	1 cut(s)	2640
PagI	TCATGA	2 cut(s)	94, 2284
PauI	GCGCGC	1 cut(s)	293
PciSI	GCTCTTC	2 cut(s)	1356, 1818
PdmI	GAANNNNTTC	3 cut(s)	76, 334, 895
PfeI	GAWTC	5 cut(s)	365, 1337, 2419, 2597, 2611
PflMI	CCANNNNNTGG	1 cut(s)	194
PkrI	GCNGC	8 cut(s)	30, 110, 379, 1181, 1294, 1644, 1926, 2446
PleI	GAGTC	4 cut(s)	172, 817, 1835, 2364
PpsI	GAGTC	4 cut(s)	172, 817, 1835, 2364
PshAI	GACNNNNGTC	1 cut(s)	1788
PsiI	TTATAA	1 cut(s)	2229
Psp1406I	AACGTT	1 cut(s)	2306
Psp6I	CCWGG	4 cut(s)	415, 699, 1533, 1765
PspFI	CCCAGC	1 cut(s)	1446
PspGI	CCWGG	4 cut(s)	415, 699, 1533, 1765
PspN4I	GGNNCC	2 cut(s)	1452, 1791
PspPI	GGNCC	2 cut(s)	1060, 1790
PspXI	VCTCGAGB	1 cut(s)	2640
PstNI	CAGNNNCTG	3 cut(s)	700, 1031, 2326
PsuI	RGATCY	4 cut(s)	1156, 1185, 1663, 1723
PteI	GCGCGC	1 cut(s)	293
PvuII	CAGCTG	1 cut(s)	644
RsaI	GTAC	8 cut(s)	41, 55, 63, 816, 1501, 1601, 2364, 2434
RsaNI	GTAC	8 cut(s)	40, 54, 62, 815, 1500, 1600, 2363, 2433
RseI	CAYNNNNRTG	2 cut(s)	1260, 1683
SapI	GCTCTTC	2 cut(s)	1356, 1818
SatI	GCNGC	8 cut(s)	29, 109, 378, 1180, 1293, 1643, 1925, 2445
Sau3AI	GATC	8 cut(s)	419, 880, 1156, 1185, 1663, 1723, 2008, 2575
Sau96I	GGNCC	2 cut(s)	1060, 1790
SchI	GAGTC	4 cut(s)	173, 817, 1835, 2364
ScrFI	CCNGG	5 cut(s)	417, 701, 1176, 1535, 1767
SduI	GDGCHC	3 cut(s)	1120, 1425, 2316
SexAI	ACCWGGT	1 cut(s)	1765
SfaNI	GCATC	9 cut(s)	546, 1037, 1090, 1176, 1480, 1502, 1611, 1864, 2390
Sfr274I	CTCGAG	1 cut(s)	2640
SfuI	TTCGAA	1 cut(s)	2098
SinI	GGWCC	2 cut(s)	1060, 1790
SlaI	CTCGAG	1 cut(s)	2640
SmiMI	CAYNNNNRTG	2 cut(s)	1260, 1683
SmlI	CTYRAG	7 cut(s)	747, 1160, 1625, 1631, 2423, 2543, 2640
SmoI	CTYRAG	7 cut(s)	747, 1160, 1625, 1631, 2423, 2543, 2640
SpeI	ACTAGT	1 cut(s)	2257
SphI	GCATGC	1 cut(s)	633
SsiI	CCGC	8 cut(s)	28, 108, 541, 818, 1643, 1673, 1877, 2028
SspI	AATATT	3 cut(s)	1214, 1508, 1885
SspMI	CTAG	7 cut(s)	14, 57, 1299, 1497, 1728, 2111, 2258
StyD4I	CCNGG	5 cut(s)	415, 699, 1174, 1533, 1765
StyI	CCWWGG	3 cut(s)	946, 1012, 2351
TaaI	ACNGT	5 cut(s)	623, 863, 965, 1108, 2022
TaiI	ACGT	3 cut(s)	79, 2196, 2309
TatI	WGTACW	3 cut(s)	1499, 1599, 2362
TauI	GCSGC	3 cut(s)	31, 111, 1645
TfiI	GAWTC	5 cut(s)	365, 1337, 2419, 2597, 2611
TscAI	CASTG	6 cut(s)	156, 411, 479, 866, 1591, 1702
TseFI	GTSAC	2 cut(s)	147, 1313
TseI	GCWGC	5 cut(s)	377, 1179, 1292, 1924, 2444
Tsp45I	GTSAC	2 cut(s)	147, 1313
TspGWI	ACGGA	3 cut(s)	717, 1834, 2474
TspRI	CASTG	6 cut(s)	156, 411, 479, 866, 1591, 1702
Van91I	CCANNNNNTGG	1 cut(s)	194
Vha464I	CTTAAG	2 cut(s)	1625, 1631
VpaK11BI	GGWCC	2 cut(s)	1060, 1790
XbaI	TCTAGA	1 cut(s)	1298
XceI	RCATGY	1 cut(s)	633
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1461, 1531
XhoI	CTCGAG	1 cut(s)	2640
XmiI	GTMKAC	2 cut(s)	1718, 1738
XmnI	GAANNNNTTC	3 cut(s)	76, 334, 895
XspI	CTAG	7 cut(s)	14, 57, 1299, 1497, 1728, 2111, 2258
ZraI	GACGTC	1 cut(s)	2194
Zsp2I	ATGCAT	2 cut(s)	631, 1495

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.