Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0004714

Physical Location & Seq

Genomic Coordinates Reverse (-)

56189041 .. 56190849

Gene Structure 1809 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0395600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1236 bp

ATGGGGAGGTCTCCATGTTGCGAGAAGGTGGGTTTGAAAAAAGGACCATGGACACCTGAGGAAGACCAAAAGCTACTGTCTTACATCCAGGAATATGGCCATGGAAGCTGGCGTGCTTTGCCCGCTAAAGCAGGGCTTCAAAGATGTGGGAAGAGCTGTCGACTGAGGTGGACTAATTACCTGAGGCCTGATATCAAAAGAGGAAAGTTTAGTTTGCAGGAAGAGCAGACCATCATTCAACTCCATGCTCTTCTCGGAAACAGGTGGTCAGCTATAGCAAATCACTTGCCCAAAAGAACAGATAACGAGATCAAGAACTACTGGAACACACACCTCAAGAAAAGACTGACCAAGATGGGCATCGACCCCGTGACCCACAAGCCCAAGCACCACGAAGCCTACGGGTCTGGCAGCGGCCACGCCAAGGATGCTGCCAACCTGAGCCACATGGCTCAGTGGGAGAGTGCCCGGCTTGAGGCCGAGGCCAGGCTGGTCAGAGAATCCAAGCAGCTCATCATGACCAATCACCCTCTCCAATTCCAGCACCACCAGCTCGTCAACATCAGCCCCTCCACCCAAACTCACGGACTTCTCATGAGCAAAGCCTCCGCCGCCACTTCAGCTCTGCCGTGTCTGGATGTGCTCAAAGCGTGGCAAGGGGCGTGGTCGTCAAAGCCGATAATCCGAGACAACAACAGTAGTAATAACACGATTGTTTCGGGTATGAATTTGATGATGGCCATGGACGACCTCGAGTCTCCAACGTCCACGTTGAACTTCCCGGCAGCGTACAACAACGCAGCATATCCAATGCAATCTCTTAACGCCAATAAGCAACTACCTCAGTTCAAACAAGAGGTGGCCAACATGATGGTGCAGCAAGACATTCATGCATACAATGGTTGTACGGATGCAAGTACAACTACTACCAATGCGTGGTTCGCTGAGGACGTTATGATTAGGTCAAGTGGCGGAAACGATGACGTGAACAACGTCATGCTGCCGGCTGCTGCTGCTGCTCTTTCGAATATCATGGAGGGTTTCTGTGGCGGCACCACCGCGGATATGTTGGTCTACAACTCAGATGAGCAGAACATGGCGGCCGGGGAGATCTCCGATACTGCTGGGGATGGAAGCTGTGGGCGTAGTGACTACAACGTTGAGGAGAACCGGAGCTACTGGGACAGTATACTCAACTTGGTGAATGCTTCACCATCCGGGTCGCCTGTGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

JmjC zf-4CXXC_R1

Protein Analysis

411

Amino Acids

45.37

Weight (kDa)

6.92

Isoelectric Point (pI)

48.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	14 - 61	5.4e-17	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	17 - 77	1.9e-13	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	67 - 112	7e-18	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	70 - 115	1.1e-08	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11950 AT1G11950 AT1G11950 AT1G62310
fragaria_vesca	FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550
malus_domestica	MD05G1351300.v1.1 MD10G1325700.v1.1
prunus_persica	Prupe.4G016300_v2.0.a1
pyrus_communis	pycom05g31840 pycom10g27540
rosa_chinensis	RchiOBHm_Chr5g0002371
rosa_laevigata	RLG00000031023
rosa_multiflora	Rmu_co8351855.1_g000001 Rmu_co8445921.1_g000001 Rmu_sc0006137.1_g000004 Rmu_sc0006137.1_g000005 Rmu_sc0017945.1_g000004
rosa_rugosa	Rorug04G0395600 Rorug04G0395700.1
rosa_samantha	Rh5AG018400 Rh5BG021100 Rh5CG020300 Rh5DG019300
rosa_wichuraiana	Rw5G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1052
AccB7I	CCANNNNNTGG	1 cut(s)	936
AccI	GTMKAC	3 cut(s)	160, 1074, 1189
AccII	CGCG	1 cut(s)	1061
AciI	CCGC	9 cut(s)	123, 414, 609, 612, 972, 1050, 1059, 1061, 1100
AclI	AACGTT	1 cut(s)	1158
AcoI	YGGCCR	5 cut(s)	97, 415, 738, 861, 1101
AcsI	RAATTY	1 cut(s)	727
AcuI	CTGAAG	1 cut(s)	603
AfaI	GTAC	3 cut(s)	791, 907, 919
AfiI	CCNNNNNNNGG	4 cut(s)	424, 475, 486, 936
AgsI	TTSAA	5 cut(s)	37, 140, 239, 775, 850
AhdI	GACNNNNNGTC	1 cut(s)	754
AjiI	CACGTC	1 cut(s)	985
AjnI	CCWGG	2 cut(s)	87, 485
AjuI	GAANNNNNNNTTGG	2 cut(s)	923, 955
AluBI	AGCT	9 cut(s)	73, 108, 156, 272, 511, 553, 623, 1137, 1176
AluI	AGCT	9 cut(s)	73, 108, 156, 272, 511, 553, 623, 1137, 1176
Alw21I	GWGCWC	1 cut(s)	645
Alw26I	GTCTC	3 cut(s)	15, 681, 762
Ama87I	CYCGRG	1 cut(s)	752
AoxI	GGCC	8 cut(s)	97, 185, 415, 477, 483, 738, 861, 1101
ApoI	RAATTY	1 cut(s)	727
AspS9I	GGNCC	1 cut(s)	44
AsuC2I	CCSGG	4 cut(s)	469, 782, 1105, 1219
AsuHPI	GGTGA	3 cut(s)	518, 1203, 1213
AsuII	TTCGAA	1 cut(s)	1025
AvaI	CYCGRG	1 cut(s)	752
AvaII	GGWCC	1 cut(s)	44
AxyI	CCTNAGG	2 cut(s)	57, 182
BaeGI	GKGCMC	1 cut(s)	469
BalI	TGGCCA	3 cut(s)	99, 740, 863
BanI	GGYRCC	1 cut(s)	1052
BbsI	GAAGAC	1 cut(s)	69
Bbv12I	GWGCWC	1 cut(s)	645
BbvCI	CCTCAGC	1 cut(s)	945
BccI	CCATC	6 cut(s)	239, 349, 730, 865, 1124, 1222
BceAI	ACGGC	1 cut(s)	613
BciT130I	CCWGG	2 cut(s)	89, 487
BcnI	CCSGG	4 cut(s)	469, 782, 1105, 1219
BcoDI	GTCTC	3 cut(s)	15, 681, 762
BfmI	CTRYAG	1 cut(s)	273
BglII	AGATCT	1 cut(s)	1110
Bme1390I	CCNGG	6 cut(s)	89, 469, 487, 782, 1105, 1219
Bme18I	GGWCC	1 cut(s)	44
BmeRI	GACNNNNNGTC	1 cut(s)	754
BmeT110I	CYCGRG	1 cut(s)	752
BmgBI	CACGTC	1 cut(s)	985
BmgT120I	GGNCC	1 cut(s)	44
BmiI	GGNNCC	1 cut(s)	1054
BmrFI	CCNGG	6 cut(s)	89, 469, 487, 782, 1105, 1219
BmrI	ACTGGG	1 cut(s)	1189
BmsI	GCATC	3 cut(s)	369, 418, 901
BmuI	ACTGGG	1 cut(s)	1189
BpiI	GAAGAC	1 cut(s)	69
Bpu10I	CCTNAGC	2 cut(s)	440, 945
Bpu14I	TTCGAA	1 cut(s)	1025
BpuEI	CTTGAG	2 cut(s)	320, 494
BpuMI	CCSGG	4 cut(s)	469, 782, 1105, 1219
BsaBI	GATNNNNATC	1 cut(s)	359
BsaI	GGTCTC	1 cut(s)	15
BsaJI	CCNNGG	7 cut(s)	47, 100, 423, 480, 741, 1059, 1104
BsaWI	WCCGGW	1 cut(s)	1170
Bsc4I	CCNNNNNNNGG	4 cut(s)	424, 475, 486, 936
Bse118I	RCCGGY	1 cut(s)	1003
Bse1I	ACTGG	2 cut(s)	326, 1184
Bse21I	CCTNAGG	2 cut(s)	57, 182
Bse8I	GATNNNNATC	1 cut(s)	359
BseBI	CCWGG	2 cut(s)	89, 487
BseDI	CCNNGG	7 cut(s)	47, 100, 423, 480, 741, 1059, 1104
BseGI	GGATG	6 cut(s)	84, 433, 643, 916, 1135, 1214
BseJI	GATNNNNATC	1 cut(s)	359
BseLI	CCNNNNNNNGG	4 cut(s)	424, 475, 486, 936
BseMII	CTCAG	8 cut(s)	48, 155, 173, 431, 467, 857, 936, 1095
BseNI	ACTGG	2 cut(s)	326, 1184
BseRI	GAGGAG	1 cut(s)	1178
BseSI	GKGCMC	1 cut(s)	469
BseX3I	CGGCCG	1 cut(s)	1101
BseYI	CCCAGC	1 cut(s)	1124
BsgI	GTGCAG	1 cut(s)	896
Bsh1236I	CGCG	1 cut(s)	1061
Bsh1285I	CGRYCG	1 cut(s)	1104
BshFI	GGCC	8 cut(s)	99, 187, 417, 479, 485, 740, 863, 1103
BshNI	GGYRCC	1 cut(s)	1052
BsiEI	CGRYCG	1 cut(s)	1104
BsiHKAI	GWGCWC	1 cut(s)	645
BsiHKCI	CYCGRG	1 cut(s)	752
BsiSI	CCGG	6 cut(s)	469, 782, 1004, 1104, 1171, 1218
BslFI	GGGAC	1 cut(s)	1196
BslI	CCNNNNNNNGG	4 cut(s)	424, 475, 486, 936
BsmAI	GTCTC	3 cut(s)	15, 681, 762
BsmFI	GGGAC	1 cut(s)	1196
BsmI	GAATGC	1 cut(s)	1210
BsnI	GGCC	8 cut(s)	99, 187, 417, 479, 485, 740, 863, 1103
Bso31I	GGTCTC	1 cut(s)	15
BsoBI	CYCGRG	1 cut(s)	752
Bsp119I	TTCGAA	1 cut(s)	1025
Bsp1286I	GDGCHC	2 cut(s)	469, 645
Bsp143I	GATC	2 cut(s)	309, 1110
Bsp19I	CCATGG	3 cut(s)	47, 100, 741
BspACI	CCGC	9 cut(s)	123, 414, 609, 612, 972, 1050, 1059, 1061, 1100
BspANI	GGCC	8 cut(s)	99, 187, 417, 479, 485, 740, 863, 1103
BspCNI	CTCAG	8 cut(s)	49, 156, 174, 432, 466, 856, 937, 1094
BspFNI	CGCG	1 cut(s)	1061
BspHI	TCATGA	2 cut(s)	516, 594
BspLI	GGNNCC	1 cut(s)	1054
BspQI	GCTCTTC	3 cut(s)	146, 216, 255
BspT104I	TTCGAA	1 cut(s)	1025
BspT107I	GGYRCC	1 cut(s)	1052
BspTNI	GGTCTC	1 cut(s)	15
BsrFI	RCCGGY	1 cut(s)	1003
BsrI	ACTGG	2 cut(s)	326, 1184
BssAI	RCCGGY	1 cut(s)	1003
BssECI	CCNNGG	7 cut(s)	47, 100, 423, 480, 741, 1059, 1104
BssMI	GATC	2 cut(s)	309, 1110
BssNAI	GTATAC	1 cut(s)	1190
BssT1I	CCWWGG	4 cut(s)	47, 100, 423, 741
Bst1107I	GTATAC	1 cut(s)	1190
Bst2UI	CCWGG	2 cut(s)	89, 487
Bst4CI	ACNGT	3 cut(s)	78, 698, 1187
Bst6I	CTCTTC	3 cut(s)	146, 216, 255
BstBI	TTCGAA	1 cut(s)	1025
BstC8I	GCNNGC	4 cut(s)	110, 114, 123, 1005
BstDEI	CTNAG	8 cut(s)	57, 164, 182, 440, 453, 843, 945, 1081
BstDSI	CCRYGG	4 cut(s)	47, 100, 741, 1059
BstF5I	GGATG	6 cut(s)	84, 433, 643, 916, 1135, 1214
BstFNI	CGCG	1 cut(s)	1061
BstKTI	GATC	2 cut(s)	312, 1113
BstMAI	GTCTC	3 cut(s)	15, 681, 762
BstMBI	GATC	2 cut(s)	309, 1110
BstMCI	CGRYCG	1 cut(s)	1104
BstNI	CCWGG	2 cut(s)	89, 487
BstSCI	CCNGG	6 cut(s)	87, 467, 485, 780, 1103, 1217
BstSFI	CTRYAG	1 cut(s)	273
BstSLI	GKGCMC	1 cut(s)	469
BstUI	CGCG	1 cut(s)	1061
BstV2I	GAAGAC	1 cut(s)	69
BstX2I	RGATCY	1 cut(s)	1110
BstXI	CCANNNNNNTGG	2 cut(s)	95, 871
BstYI	RGATCY	1 cut(s)	1110
BstZ17I	GTATAC	1 cut(s)	1190
BstZI	CGGCCG	1 cut(s)	1101
Bsu36I	CCTNAGG	2 cut(s)	57, 182
BsuRI	GGCC	8 cut(s)	99, 187, 417, 479, 485, 740, 863, 1103
BtgI	CCRYGG	4 cut(s)	47, 100, 741, 1059
BtrI	CACGTC	1 cut(s)	985
BtsCI	GGATG	6 cut(s)	84, 433, 643, 916, 1135, 1214
BtsIMutI	CAGTG	1 cut(s)	461
Cac8I	GCNNGC	4 cut(s)	110, 114, 123, 1005
CciI	TCATGA	2 cut(s)	516, 594
Cfr10I	RCCGGY	1 cut(s)	1003
Cfr13I	GGNCC	1 cut(s)	44
Cfr42I	CCGCGG	1 cut(s)	1062
Csp6I	GTAC	3 cut(s)	790, 906, 918
CspCI	CAANNNNNGTGG	2 cut(s)	644, 679
CviQI	GTAC	3 cut(s)	790, 906, 918
DdeI	CTNAG	8 cut(s)	57, 164, 182, 440, 453, 843, 945, 1081
DpnI	GATC	2 cut(s)	311, 1112
DpnII	GATC	2 cut(s)	309, 1110
DriI	GACNNNNNGTC	1 cut(s)	754
EaeI	YGGCCR	5 cut(s)	97, 415, 738, 861, 1101
EagI	CGGCCG	1 cut(s)	1101
Eam1104I	CTCTTC	3 cut(s)	146, 216, 255
Eam1105I	GACNNNNNGTC	1 cut(s)	754
EarI	CTCTTC	3 cut(s)	146, 216, 255
EciI	GGCGGA	2 cut(s)	598, 987
EclXI	CGGCCG	1 cut(s)	1101
Eco130I	CCWWGG	4 cut(s)	47, 100, 423, 741
Eco147I	AGGCCT	1 cut(s)	187
Eco31I	GGTCTC	1 cut(s)	15
Eco32I	GATATC	1 cut(s)	193
Eco47I	GGWCC	1 cut(s)	44
Eco52I	CGGCCG	1 cut(s)	1101
Eco57I	CTGAAG	1 cut(s)	603
Eco81I	CCTNAGG	2 cut(s)	57, 182
Eco88I	CYCGRG	1 cut(s)	752
EcoRII	CCWGG	2 cut(s)	87, 485
EcoRV	GATATC	1 cut(s)	193
EcoT14I	CCWWGG	4 cut(s)	47, 100, 423, 741
EcoT22I	ATGCAT	1 cut(s)	895
ErhI	CCWWGG	4 cut(s)	47, 100, 423, 741
FalI	AAGNNNNNCTT	2 cut(s)	120, 152
FaqI	GGGAC	1 cut(s)	1196
FauI	CCCGC	1 cut(s)	130
FblI	GTMKAC	3 cut(s)	160, 1074, 1189
FokI	GGATG	6 cut(s)	71, 440, 650, 923, 1142, 1201
GsaI	CCCAGC	1 cut(s)	1128
HaeIII	GGCC	8 cut(s)	99, 187, 417, 479, 485, 740, 863, 1103
HapII	CCGG	6 cut(s)	469, 782, 1004, 1104, 1171, 1218
HincII	GTYRAC	2 cut(s)	161, 559
HindII	GTYRAC	2 cut(s)	161, 559
HinfI	GANTC	2 cut(s)	500, 755
HpaII	CCGG	6 cut(s)	469, 782, 1004, 1104, 1171, 1218
HphI	GGTGA	3 cut(s)	518, 1203, 1213
Hpy166II	GTNNAC	7 cut(s)	161, 171, 559, 768, 988, 1075, 1190
Hpy188I	TCNGA	5 cut(s)	257, 497, 686, 1084, 1117
Hpy188III	TCNNGA	5 cut(s)	313, 337, 517, 595, 635
Hpy8I	GTNNAC	7 cut(s)	161, 171, 559, 768, 988, 1075, 1190
HpyAV	CCTTC	1 cut(s)	19
HpyCH4III	ACNGT	3 cut(s)	78, 698, 1187
HpyCH4IV	ACGT	6 cut(s)	764, 770, 951, 984, 993, 1158
HpyCH4V	TGCA	5 cut(s)	217, 814, 877, 893, 914
HpyF3I	CTNAG	8 cut(s)	57, 164, 182, 440, 453, 843, 945, 1081
HpySE526I	ACGT	6 cut(s)	764, 770, 951, 984, 993, 1158
KroI	GCCGGC	1 cut(s)	1003
KroNI	GCCGGC	1 cut(s)	1005
KspI	CCGCGG	1 cut(s)	1062
Kzo9I	GATC	2 cut(s)	309, 1110
LguI	GCTCTTC	3 cut(s)	146, 216, 255
LmnI	GCTCC	1 cut(s)	1173
LweI	GCATC	3 cut(s)	369, 418, 901
MaeII	ACGT	6 cut(s)	764, 770, 951, 984, 993, 1158
MaeIII	GTNAC	2 cut(s)	370, 1148
MalI	GATC	2 cut(s)	311, 1112
MboI	GATC	2 cut(s)	309, 1110
MboII	GAAGA	4 cut(s)	74, 163, 233, 242
MflI	RGATCY	1 cut(s)	1110
MhlI	GDGCHC	2 cut(s)	469, 645
MlsI	TGGCCA	3 cut(s)	99, 740, 863
MluCI	AATT	3 cut(s)	175, 536, 727
MluNI	TGGCCA	3 cut(s)	99, 740, 863
MlyI	GAGTC	1 cut(s)	764
MmeI	TCCRAC	1 cut(s)	785
Mox20I	TGGCCA	3 cut(s)	99, 740, 863
Mph1103I	ATGCAT	1 cut(s)	895
MroNI	GCCGGC	1 cut(s)	1003
MscI	TGGCCA	3 cut(s)	99, 740, 863
MseI	TTAA	1 cut(s)	822
MslI	CAYNNNNRTG	1 cut(s)	872
Msp20I	TGGCCA	3 cut(s)	99, 740, 863
MspA1I	CMGCKG	2 cut(s)	414, 1061
MspI	CCGG	6 cut(s)	469, 782, 1004, 1104, 1171, 1218
MspR9I	CCNGG	6 cut(s)	89, 469, 487, 782, 1105, 1219
Mva1269I	GAATGC	1 cut(s)	1210
MvaI	CCWGG	2 cut(s)	89, 487
MvnI	CGCG	1 cut(s)	1061
NaeI	GCCGGC	1 cut(s)	1005
NciI	CCSGG	4 cut(s)	469, 782, 1105, 1219
NcoI	CCATGG	3 cut(s)	47, 100, 741
NdeII	GATC	2 cut(s)	309, 1110
NgoMIV	GCCGGC	1 cut(s)	1003
NlaIV	GGNNCC	1 cut(s)	1054
NmeAIII	GCCGAG	1 cut(s)	505
NmuCI	GTSAC	2 cut(s)	370, 1148
NsiI	ATGCAT	1 cut(s)	895
NspV	TTCGAA	1 cut(s)	1025
PaeR7I	CTCGAG	1 cut(s)	752
PagI	TCATGA	2 cut(s)	516, 594
PceI	AGGCCT	1 cut(s)	187
PciSI	GCTCTTC	3 cut(s)	146, 216, 255
PcsI	WCGNNNNNNNCGW	3 cut(s)	674, 948, 990
PctI	GAATGC	1 cut(s)	1210
PdiI	GCCGGC	1 cut(s)	1005
PfeI	GAWTC	1 cut(s)	500
PflMI	CCANNNNNTGG	1 cut(s)	936
PfoI	TCCNGGA	1 cut(s)	87
PleI	GAGTC	1 cut(s)	763
PpsI	GAGTC	1 cut(s)	763
Psp1406I	AACGTT	1 cut(s)	1158
Psp6I	CCWGG	2 cut(s)	87, 485
PspFI	CCCAGC	1 cut(s)	1124
PspGI	CCWGG	2 cut(s)	87, 485
PspN4I	GGNNCC	1 cut(s)	1054
PspPI	GGNCC	1 cut(s)	44
PspXI	VCTCGAGB	1 cut(s)	752
PsrI	GAACNNNNNNTAC	2 cut(s)	1160, 1192
PsuI	RGATCY	1 cut(s)	1110
RsaI	GTAC	3 cut(s)	791, 907, 919
RsaNI	GTAC	3 cut(s)	790, 906, 918
RseI	CAYNNNNRTG	1 cut(s)	872
SacII	CCGCGG	1 cut(s)	1062
SalI	GTCGAC	1 cut(s)	159
SapI	GCTCTTC	3 cut(s)	146, 216, 255
SaqAI	TTAA	1 cut(s)	822
Sau3AI	GATC	2 cut(s)	309, 1110
Sau96I	GGNCC	1 cut(s)	44
SchI	GAGTC	1 cut(s)	764
ScrFI	CCNGG	6 cut(s)	89, 469, 487, 782, 1105, 1219
SduI	GDGCHC	2 cut(s)	469, 645
SfaNI	GCATC	3 cut(s)	369, 418, 901
SfcI	CTRYAG	1 cut(s)	273
Sfr274I	CTCGAG	1 cut(s)	752
Sfr303I	CCGCGG	1 cut(s)	1062
SfuI	TTCGAA	1 cut(s)	1025
SgrBI	CCGCGG	1 cut(s)	1062
SinI	GGWCC	1 cut(s)	44
SlaI	CTCGAG	1 cut(s)	752
SmiMI	CAYNNNNRTG	1 cut(s)	872
SmlI	CTYRAG	3 cut(s)	335, 473, 752
SmoI	CTYRAG	3 cut(s)	335, 473, 752
Sse9I	AATT	3 cut(s)	175, 536, 727
SseBI	AGGCCT	1 cut(s)	187
SsiI	CCGC	9 cut(s)	123, 414, 609, 612, 972, 1050, 1059, 1061, 1100
StuI	AGGCCT	1 cut(s)	187
StyD4I	CCNGG	6 cut(s)	87, 467, 485, 780, 1103, 1217
StyI	CCWWGG	4 cut(s)	47, 100, 423, 741
TaaI	ACNGT	3 cut(s)	78, 698, 1187
TaiI	ACGT	6 cut(s)	767, 773, 954, 987, 996, 1161
TaqI	TCGA	4 cut(s)	160, 363, 753, 1025
TasI	AATT	3 cut(s)	175, 536, 727
TatI	WGTACW	1 cut(s)	917
TauI	GCSGC	4 cut(s)	417, 614, 1053, 1103
TfiI	GAWTC	1 cut(s)	500
Tru1I	TTAA	1 cut(s)	822
Tru9I	TTAA	1 cut(s)	822
TscAI	CASTG	1 cut(s)	461
TseFI	GTSAC	2 cut(s)	370, 1148
Tsp45I	GTSAC	2 cut(s)	370, 1148
TspDTI	ATGAA	2 cut(s)	740, 878
TspGWI	ACGGA	2 cut(s)	600, 923
TspRI	CASTG	1 cut(s)	461
Van91I	CCANNNNNTGG	1 cut(s)	936
VpaK11BI	GGWCC	1 cut(s)	44
XapI	RAATTY	1 cut(s)	727
XhoI	CTCGAG	1 cut(s)	752
XmiI	GTMKAC	3 cut(s)	160, 1074, 1189
Zsp2I	ATGCAT	1 cut(s)	895

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.