Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0004714

Physical Location & Seq

Genomic Coordinates Forward (+)

775642 .. 779737

Gene Structure 4096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G016300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2604 bp

ATGGAAGTTTTGATAGTAGAACAAGGAAGGCTGGGGCAGTATAATGATAACAAGATCCGTACACCTAAGAGAAAACGTTCAAATTTCCTGCATCATGGAAAGGAAGAAGGATCCTCAAATGGCAAAAGGATTTCAAAAAAGCGAAGTTCCTCCTCAAATGCGGTAGAAAGTTGTGAAAATGAGTTTTCAATGGATGAATTGGAAGAAGATGAAGAAATTATGTTTTTGATTAAGGCACGAGCGCGGAAAAGGAGAAGTGTTGACTGTGAAGTGATGGGAAGAGGTTCCTCAAAGGATGAAAGAGTAAAATATGAGTTAAGGAATACTACTAGCAAAATTTCATCCTCTTCACCACCATCTTCATCTGGTTCATCATGCACTTCGAAATATACGGAGGATAATAGAGAAGTTTATTTGAAGTGTCATCATTGTATGAAGGAGGAGAAGAAAACCATAGTTTCCTGCTCCAAGTGTAAAAAGAACTCCTATTGCGTCCGCTGTATCAAGCAATGGTATCCTCACATGAAAGTAAAGGAAGTGAAGGACCTTTGCCCATTTTGCCGCAGAAATTGCAACTGTAATGCATGCCTGCACTCAACTGGGGTGATTGAGACACCAAAGAGGGATATAAGTGATCGTGAGAGGGCTCAGCATCTGGAGTGTTTAATTTCCAACCTGCTTCCATTTTTAAAGCAAATTTCTCAAGAACAAATTCAAGAGATAGAGATTGAAGCTAATATTCGAGGACTTTCACCTTCCGAATTTGAAATACCACAGACCCTTTGTTTCAATGATGAGCGTGTCTATTGCAACCATTGTGCAACTTCAATCATTGATCTACATCGAAGCTGCCCAAAATGTTCTTATGAACTTTGTCTAAGTTGTTGCCGAGAAATTCGCCAGGGATGCCTCTTAGACCGTGGAGAAGTGAAATTTCAATATAGGAGTAGGGGTTTTGATTACATCCATGGTGGAGACCCATCACCTGACTGTTGTCCCTTGGAAGCTTCAGAGGACCATATTGAGCCTTTGATTGAGTGGAAGGGAAACGATGATGCTACTGTTACTTGTGCTCCGAAAGAAATGGGTGGCTGTGGTGATTGCATGTTGGATCTTAAGCGAATCCTTCCACCTGACTGGATCTCAAATTTAGGAGTCAAAGCAAAACATTTATTAGAGATTTTCCGAACAGAACATTCTACTTTCAAGCGTGATTGTGCTGAAAGAAGAAGGGATACGTTACTAAAAGCAGCTTCTAGAGAGGATTCTCGTGACAACTTCTTATTTTGTCCAGATTCAAGGGACACTCTGAAAGAAGAAGGGCTTTTGCGCTTCAAAGAACATTGGGTTAATGGTGAACCAGTTATTGTCAGAAATGTGCTTGAACAGGCAAATGGATTGAGCTGGGAGCCAATGGTCATGTGGCGTGCTTTAAGTGAAAATATGGATATAGCTAGTACCTCACAGTTTTCAAAAGTAAAGACCATCGATTGCCTGGCGGGTTGTGAGGTGGAAATCAATACTCGTGAATTTTTTGAAGGATACACTGAAGGGAGAATGTATAGTAATTTATGGCCAGAGATGCTTAAGCTGAAGGATTGGCCCCCTTCTGATAAGTTTGAGGACCTTTTGCCCCGCCATTGTGATGAATTTATCAGTGCCTTGCCATTTCAAGAGTACACGGATCCTAGATCTGGTATTCTCAACCTTGCTGTTAAGTTGCCACCAGGTGTTTTGAAACCAGACATGGGCCCAAAAACATATATTGCTTATGGGCTTATGGAAGAGCTTGGAAGAGGGGACTCTGTAACTAAACTTCATTGCGACATGTCCGATGCAGTGAATATTTTGACACACACATCAGAAGTACAGCTAAGTGATGAGCAGCAATCTGCAATTTCAAGGTTGAACAAATTACATAGGGCCCAAGATGAAAGAGAGCTTATGGATTGGATGAATTCTCTCAAGGATGGTGGACAACCTGGTCAACAGACACAGGATAGAGAAGCCCTAGAAAACACTCTCTCTCCTGAAATTAACGTAGAATTGAAAGTACCAGAAGATGAAGATGAAGATGAAGATGAGTTAGATGGGCCCACTACATCCGGTTCTTCCTCCACCGAAGTGGCAGAGGAAACTGGTGGTGCTTTGTGGGACATCTTCCGGAGAGAGGATGTTCCTAAATTAGAGGCATACCTTATGAAACATTATAAGGAATTTAGGCACACCTATTGTTCACTAGTTGAACGGGTCATTCATCCAATTCATGACCAATCCTTTTATTTAACATTGGAGCACAAAAAGAAGCTGAAGGAGGAATTTGGTGTTGAACCATGGACGTTTCTACAAAAACTTGGAGAGGCAGTATTTATTCCAGCCGGATGTCCACACCAAGTCAGGAATCTCAAGTCTTGTACAAAAGTAGCAGCCGACTTCGTGTCTCCTGAAAACGTCCACGAGTGCCTCCGTTTGACCGAGGAGTTCAGACAACTTCCGAAGAACCATAGAGCTAGAGAAGACAAACTTGAGATAAAGAAAATGATACTTTATGCAGTCGACGAAGCCCTTAAAGATTTGGAAGCCTTAGTATCAACTCAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

JmjC zf-4CXXC_R1

Protein Analysis

868

Amino Acids

99.53

Weight (kDa)

5.6

Isoelectric Point (pI)

57.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11950 AT1G11950 AT1G11950 AT1G62310
fragaria_vesca	FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550
malus_domestica	MD05G1351300.v1.1 MD10G1325700.v1.1
prunus_persica	Prupe.4G016300_v2.0.a1
pyrus_communis	pycom05g31840 pycom10g27540
rosa_chinensis	RchiOBHm_Chr5g0002371
rosa_laevigata	RLG00000031023
rosa_multiflora	Rmu_co8351855.1_g000001 Rmu_co8445921.1_g000001 Rmu_sc0006137.1_g000004 Rmu_sc0006137.1_g000005 Rmu_sc0017945.1_g000004
rosa_rugosa	Rorug04G0395600 Rorug04G0395700.1
rosa_samantha	Rh5AG018400 Rh5BG021100 Rh5CG020300 Rh5DG019300
rosa_wichuraiana	Rw5G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2211
AasI	GACNNNNNNGTC	1 cut(s)	1983
Acc36I	ACCTGC	1 cut(s)	684
AccI	GTMKAC	1 cut(s)	2556
AccII	CGCG	1 cut(s)	244
AccIII	TCCGGA	1 cut(s)	2163
AciI	CCGC	6 cut(s)	161, 244, 496, 562, 1499, 1636
AclI	AACGTT	1 cut(s)	76
AclWI	GGATC	7 cut(s)	49, 105, 118, 1119, 1148, 1679, 1692
AcoI	YGGCCR	1 cut(s)	1574
AcuI	CTGAAG	4 cut(s)	993, 1569, 1613, 2330
AdeI	CACNNNGTG	1 cut(s)	1730
AfaI	GTAC	6 cut(s)	61, 1459, 1679, 1869, 2055, 2416
AfiI	CCNNNNNNNGG	3 cut(s)	1694, 1748, 2170
AflII	CTTAAG	2 cut(s)	1115, 1586
AflIII	ACRYGT	1 cut(s)	1827
AhdI	GACNNNNNGTC	1 cut(s)	2437
AhlI	ACTAGT	1 cut(s)	2239
AjnI	CCWGG	4 cut(s)	900, 1494, 1726, 1981
AleI	CACNNNNGTG	1 cut(s)	2123
Alw21I	GWGCWC	2 cut(s)	1075, 2298
Alw26I	GTCTC	3 cut(s)	605, 969, 2445
AlwI	GGATC	7 cut(s)	49, 105, 118, 1119, 1148, 1679, 1692
AlwNI	CAGNNNCTG	1 cut(s)	655
Aor13HI	TCCGGA	1 cut(s)	2163
AoxI	GGCC	5 cut(s)	1574, 1601, 1750, 1923, 2093
ApaI	GGGCCC	3 cut(s)	1754, 1927, 2097
ApeKI	GCWGC	4 cut(s)	849, 1250, 1885, 2426
Asp700I	GAANNNNTTC	3 cut(s)	76, 283, 711
AspLEI	GCGC	2 cut(s)	244, 1332
AsuHPI	GGTGA	6 cut(s)	342, 616, 744, 975, 1109, 1367
AsuII	TTCGAA	1 cut(s)	383
AvaII	GGWCC	3 cut(s)	544, 1015, 1624
BaeGI	GKGCMC	3 cut(s)	1754, 1927, 2097
BalI	TGGCCA	1 cut(s)	1576
BamHI	GGATCC	2 cut(s)	110, 1684
BanII	GRGCYC	4 cut(s)	649, 1754, 1927, 2097
BarI	GAAGNNNNNNTAC	4 cut(s)	1219, 1251, 1800, 1832
BauI	CACGAG	4 cut(s)	237, 1269, 1524, 2456
BbsI	GAAGAC	1 cut(s)	2523
Bbv12I	GWGCWC	2 cut(s)	1075, 2298
BbvI	GCAGC	4 cut(s)	836, 1262, 1897, 2438
BccI	CCATC	6 cut(s)	268, 364, 988, 1493, 1964, 2084
BciT130I	CCWGG	4 cut(s)	902, 1496, 1728, 1983
BciVI	GTATCC	3 cut(s)	525, 1228, 1535
BcoDI	GTCTC	3 cut(s)	605, 969, 2445
BcuI	ACTAGT	1 cut(s)	2239
BfaI	CTAG	7 cut(s)	330, 1257, 1455, 1689, 2012, 2240, 2511
BfrI	CTTAAG	2 cut(s)	1115, 1586
BfuAI	ACCTGC	1 cut(s)	684
BfuI	GTATCC	3 cut(s)	525, 1228, 1535
BglII	AGATCT	1 cut(s)	1691
BisI	GCNGC	5 cut(s)	562, 850, 1251, 1886, 2427
BlpI	GCTNAGC	1 cut(s)	648
BlsI	GCNGC	5 cut(s)	563, 851, 1252, 1887, 2428
Bme1390I	CCNGG	4 cut(s)	902, 1496, 1728, 1983
Bme18I	GGWCC	3 cut(s)	544, 1015, 1624
BmeRI	GACNNNNNGTC	1 cut(s)	2437
BmiI	GGNNCC	8 cut(s)	112, 286, 1410, 1604, 1686, 1752, 1925, 2095
BmrFI	CCNGG	4 cut(s)	902, 1496, 1728, 1983
BmrI	ACTGGG	1 cut(s)	609
BmsI	GCATC	6 cut(s)	100, 661, 896, 1045, 1572, 1825
BmuI	ACTGGG	1 cut(s)	609
BoxI	GACNNNNGTC	1 cut(s)	993
BpiI	GAAGAC	1 cut(s)	2523
BpmI	CTGGAG	1 cut(s)	677
Bpu1102I	GCTNAGC	1 cut(s)	648
Bpu14I	TTCGAA	1 cut(s)	383
BpuEI	CTTGAG	5 cut(s)	687, 1949, 2390, 2546, 2580
Bsa29I	ATCGAT	1 cut(s)	1488
BsaBI	GATNNNNATC	1 cut(s)	840
BsaI	GGTCTC	1 cut(s)	969
BsaJI	CCNNGG	6 cut(s)	901, 919, 967, 999, 2333, 2475
BsaWI	WCCGGW	2 cut(s)	2105, 2163
BsaXI	ACNNNNNCTCC	8 cut(s)	937, 967, 1057, 1087, 2011, 2041, 2349, 2379
Bsc4I	CCNNNNNNNGG	3 cut(s)	1694, 1748, 2170
Bse1I	ACTGG	4 cut(s)	604, 1142, 1361, 2143
Bse3DI	GCAATG	2 cut(s)	515, 1819
Bse8I	GATNNNNATC	1 cut(s)	840
BseAI	TCCGGA	1 cut(s)	2163
BseBI	CCWGG	4 cut(s)	902, 1496, 1728, 1983
BseCI	ATCGAT	1 cut(s)	1488
BseDI	CCNNGG	6 cut(s)	901, 919, 967, 999, 2333, 2475
BseJI	GATNNNNATC	1 cut(s)	840
BseLI	CCNNNNNNNGG	3 cut(s)	1694, 1748, 2170
BseMI	GCAATG	2 cut(s)	515, 1819
BseMII	CTCAG	1 cut(s)	662
BseNI	ACTGG	4 cut(s)	604, 1142, 1361, 2143
BseRI	GAGGAG	3 cut(s)	142, 455, 2492
BseSI	GKGCMC	3 cut(s)	1754, 1927, 2097
BseXI	GCAGC	4 cut(s)	836, 1262, 1897, 2438
BseYI	CCCAGC	2 cut(s)	31, 1404
BsgI	GTGCAG	1 cut(s)	575
Bsh1236I	CGCG	1 cut(s)	244
BshFI	GGCC	5 cut(s)	1576, 1603, 1752, 1925, 2095
BshVI	ATCGAT	1 cut(s)	1488
BsiHKAI	GWGCWC	2 cut(s)	1075, 2298
BsiSI	CCGG	3 cut(s)	2106, 2164, 2379
BslFI	GGGAC	4 cut(s)	981, 1316, 1814, 2168
BslI	CCNNNNNNNGG	3 cut(s)	1694, 1748, 2170
BsmAI	GTCTC	3 cut(s)	605, 969, 2445
BsmFI	GGGAC	4 cut(s)	981, 1316, 1814, 2168
BsnI	GGCC	5 cut(s)	1576, 1603, 1752, 1925, 2095
Bso31I	GGTCTC	1 cut(s)	969
Bsp119I	TTCGAA	1 cut(s)	383
Bsp120I	GGGCCC	3 cut(s)	1750, 1923, 2093
Bsp1286I	GDGCHC	6 cut(s)	649, 1075, 1754, 1927, 2097, 2298
Bsp13I	TCCGGA	1 cut(s)	2163
Bsp1407I	TGTACA	1 cut(s)	2414
Bsp143I	GATC	8 cut(s)	54, 110, 634, 835, 1111, 1140, 1684, 1691
Bsp1720I	GCTNAGC	1 cut(s)	648
Bsp19I	CCATGG	2 cut(s)	967, 2333
BspACI	CCGC	6 cut(s)	161, 244, 496, 562, 1499, 1636
BspANI	GGCC	5 cut(s)	1576, 1603, 1752, 1925, 2095
BspCNI	CTCAG	1 cut(s)	661
BspDI	ATCGAT	1 cut(s)	1488
BspEI	TCCGGA	1 cut(s)	2163
BspFNI	CGCG	1 cut(s)	244
BspHI	TCATGA	1 cut(s)	2266
BspLI	GGNNCC	8 cut(s)	112, 286, 1410, 1604, 1686, 1752, 1925, 2095
BspMI	ACCTGC	1 cut(s)	684
BspPI	GGATC	7 cut(s)	49, 105, 118, 1119, 1148, 1679, 1692
BspQI	GCTCTTC	1 cut(s)	1779
BspT104I	TTCGAA	1 cut(s)	383
BspTI	CTTAAG	2 cut(s)	1115, 1586
BspTNI	GGTCTC	1 cut(s)	969
BsrDI	GCAATG	2 cut(s)	515, 1819
BsrGI	TGTACA	1 cut(s)	2414
BsrI	ACTGG	4 cut(s)	604, 1142, 1361, 2143
BssECI	CCNNGG	6 cut(s)	901, 919, 967, 999, 2333, 2475
BssMI	GATC	8 cut(s)	54, 110, 634, 835, 1111, 1140, 1684, 1691
BssSI	CACGAG	4 cut(s)	237, 1269, 1524, 2456
BssT1I	CCWWGG	3 cut(s)	967, 999, 2333
Bst2BI	CACGAG	4 cut(s)	237, 1269, 1524, 2456
Bst2UI	CCWGG	4 cut(s)	902, 1496, 1728, 1983
Bst4CI	ACNGT	6 cut(s)	266, 578, 920, 992, 1063, 1467
Bst6I	CTCTTC	4 cut(s)	274, 352, 1779, 1789
BstAFI	CTTAAG	2 cut(s)	1115, 1586
BstAPI	GCANNNNNTGC	1 cut(s)	570
BstAUI	TGTACA	1 cut(s)	2414
BstBI	TTCGAA	1 cut(s)	383
BstC8I	GCNNGC	3 cut(s)	586, 590, 1428
BstDEI	CTNAG	6 cut(s)	66, 648, 878, 913, 1874, 2584
BstDSI	CCRYGG	3 cut(s)	919, 967, 2333
BstFNI	CGCG	1 cut(s)	244
BstHHI	GCGC	2 cut(s)	244, 1332
BstKTI	GATC	8 cut(s)	57, 113, 637, 838, 1114, 1143, 1687, 1694
BstMAI	GTCTC	3 cut(s)	605, 969, 2445
BstMBI	GATC	8 cut(s)	54, 110, 634, 835, 1111, 1140, 1684, 1691
BstMWI	GCNNNNNNNGC	4 cut(s)	558, 570, 906, 1582
BstNI	CCWGG	4 cut(s)	902, 1496, 1728, 1983
BstNSI	RCATGY	3 cut(s)	588, 1108, 1831
BstPAI	GACNNNNGTC	1 cut(s)	993
BstSCI	CCNGG	4 cut(s)	900, 1494, 1726, 1981
BstSLI	GKGCMC	3 cut(s)	1754, 1927, 2097
BstUI	CGCG	1 cut(s)	244
BstV1I	GCAGC	4 cut(s)	836, 1262, 1897, 2438
BstV2I	GAAGAC	1 cut(s)	2523
BstX2I	RGATCY	6 cut(s)	54, 110, 1111, 1140, 1684, 1691
BstXI	CCANNNNNNTGG	2 cut(s)	1137, 2125
BstYI	RGATCY	6 cut(s)	54, 110, 1111, 1140, 1684, 1691
Bsu15I	ATCGAT	1 cut(s)	1488
BsuI	GTATCC	3 cut(s)	525, 1228, 1535
BsuRI	GGCC	5 cut(s)	1576, 1603, 1752, 1925, 2095
BsuTUI	ATCGAT	1 cut(s)	1488
BtgI	CCRYGG	3 cut(s)	919, 967, 2333
BtsI	GCAGTG	1 cut(s)	1845
BtsIMutI	CAGTG	3 cut(s)	1545, 1663, 1845
BveI	ACCTGC	1 cut(s)	684
Cac8I	GCNNGC	3 cut(s)	586, 590, 1428
CaiI	CAGNNNCTG	1 cut(s)	655
CciI	TCATGA	1 cut(s)	2266
CfoI	GCGC	2 cut(s)	244, 1332
ClaI	ATCGAT	1 cut(s)	1488
CseI	GACGC	1 cut(s)	481
CsiI	ACCWGGT	2 cut(s)	1726, 1981
Csp6I	GTAC	6 cut(s)	60, 1458, 1678, 1868, 2054, 2415
CspCI	CAANNNNNGTGG	2 cut(s)	1954, 1989
CviQI	GTAC	6 cut(s)	60, 1458, 1678, 1868, 2054, 2415
DdeI	CTNAG	6 cut(s)	66, 648, 878, 913, 1874, 2584
DpnI	GATC	8 cut(s)	56, 112, 636, 837, 1113, 1142, 1686, 1693
DpnII	GATC	8 cut(s)	54, 110, 634, 835, 1111, 1140, 1684, 1691
DraI	TTTAAA	1 cut(s)	690
DraIII	CACNNNGTG	1 cut(s)	1730
DrdI	GACNNNNNNGTC	1 cut(s)	1983
DriI	GACNNNNNGTC	1 cut(s)	2437
DseDI	GACNNNNNNGTC	1 cut(s)	1983
EaeI	YGGCCR	1 cut(s)	1574
Eam1104I	CTCTTC	4 cut(s)	274, 352, 1779, 1789
Eam1105I	GACNNNNNGTC	1 cut(s)	2437
EarI	CTCTTC	4 cut(s)	274, 352, 1779, 1789
Eco130I	CCWWGG	3 cut(s)	967, 999, 2333
Eco24I	GRGCYC	4 cut(s)	649, 1754, 1927, 2097
Eco31I	GGTCTC	1 cut(s)	969
Eco47I	GGWCC	3 cut(s)	544, 1015, 1624
Eco57I	CTGAAG	4 cut(s)	993, 1569, 1613, 2330
EcoO109I	RGGNCCY	3 cut(s)	544, 1624, 1923
EcoRI	GAATTC	1 cut(s)	1957
EcoRII	CCWGG	4 cut(s)	900, 1494, 1726, 1981
EcoT14I	CCWWGG	3 cut(s)	967, 999, 2333
EcoT22I	ATGCAT	1 cut(s)	586
EcoT38I	GRGCYC	4 cut(s)	649, 1754, 1927, 2097
ErhI	CCWWGG	3 cut(s)	967, 999, 2333
FalI	AAGNNNNNCTT	4 cut(s)	1308, 1340, 2508, 2540
FaqI	GGGAC	4 cut(s)	981, 1316, 1814, 2168
FauI	CCCGC	2 cut(s)	1492, 1643
FblI	GTMKAC	1 cut(s)	2556
Fnu4HI	GCNGC	5 cut(s)	562, 850, 1251, 1886, 2427
FriOI	GRGCYC	4 cut(s)	649, 1754, 1927, 2097
Fsp4HI	GCNGC	5 cut(s)	562, 850, 1251, 1886, 2427
FspBI	CTAG	7 cut(s)	330, 1257, 1455, 1689, 2012, 2240, 2511
GlaI	GCGC	2 cut(s)	243, 1331
GluI	GCNGC	5 cut(s)	562, 850, 1251, 1886, 2427
GsaI	CCCAGC	2 cut(s)	35, 1408
GsuI	CTGGAG	1 cut(s)	677
HaeIII	GGCC	5 cut(s)	1576, 1603, 1752, 1925, 2095
HapII	CCGG	3 cut(s)	2106, 2164, 2379
HgaI	GACGC	1 cut(s)	481
HhaI	GCGC	2 cut(s)	244, 1332
Hin6I	GCGC	2 cut(s)	242, 1330
HinP1I	GCGC	2 cut(s)	242, 1330
HincII	GTYRAC	3 cut(s)	262, 1988, 2557
HindII	GTYRAC	3 cut(s)	262, 1988, 2557
HindIII	AAGCTT	1 cut(s)	1005
HinfI	GANTC	6 cut(s)	1122, 1155, 1265, 1295, 1802, 2401
HpaII	CCGG	3 cut(s)	2106, 2164, 2379
HphI	GGTGA	6 cut(s)	342, 616, 744, 975, 1109, 1367
Hpy99I	CGWCG	1 cut(s)	2561
HpyCH4III	ACNGT	6 cut(s)	266, 578, 920, 992, 1063, 1467
HpyCH4IV	ACGT	5 cut(s)	76, 1238, 2040, 2339, 2451
HpyF10VI	GCNNNNNNNGC	4 cut(s)	558, 570, 906, 1582
HpyF3I	CTNAG	6 cut(s)	66, 648, 878, 913, 1874, 2584
HpySE526I	ACGT	5 cut(s)	76, 1238, 2040, 2339, 2451
HspAI	GCGC	2 cut(s)	242, 1330
Kpn2I	TCCGGA	1 cut(s)	2163
Kzo9I	GATC	8 cut(s)	54, 110, 634, 835, 1111, 1140, 1684, 1691
LguI	GCTCTTC	1 cut(s)	1779
LmnI	GCTCC	4 cut(s)	470, 1078, 1408, 2293
Lsp1109I	GCAGC	4 cut(s)	836, 1262, 1897, 2438
LweI	GCATC	6 cut(s)	100, 661, 896, 1045, 1572, 1825
MabI	ACCWGGT	2 cut(s)	1726, 1981
MaeI	CTAG	7 cut(s)	330, 1257, 1455, 1689, 2012, 2240, 2511
MaeII	ACGT	5 cut(s)	76, 1238, 2040, 2339, 2451
MaeIII	GTNAC	4 cut(s)	1063, 1239, 1271, 1807
MalI	GATC	8 cut(s)	56, 112, 636, 837, 1113, 1142, 1686, 1693
MboI	GATC	8 cut(s)	54, 110, 634, 835, 1111, 1140, 1684, 1691
MflI	RGATCY	6 cut(s)	54, 110, 1111, 1140, 1684, 1691
MhlI	GDGCHC	6 cut(s)	649, 1075, 1754, 1927, 2097, 2298
MlsI	TGGCCA	1 cut(s)	1576
MluNI	TGGCCA	1 cut(s)	1576
MlyI	GAGTC	2 cut(s)	1164, 1796
MmeI	TCCRAC	2 cut(s)	696, 1089
Mox20I	TGGCCA	1 cut(s)	1576
Mph1103I	ATGCAT	1 cut(s)	586
MroI	TCCGGA	1 cut(s)	2163
MroXI	GAANNNNTTC	3 cut(s)	76, 283, 711
MscI	TGGCCA	1 cut(s)	1576
MslI	CAYNNNNRTG	2 cut(s)	1644, 2123
Msp20I	TGGCCA	1 cut(s)	1576
MspA1I	CMGCKG	1 cut(s)	498
MspCI	CTTAAG	2 cut(s)	1115, 1586
MspI	CCGG	3 cut(s)	2106, 2164, 2379
MspR9I	CCNGG	4 cut(s)	902, 1496, 1728, 1983
MvaI	CCWGG	4 cut(s)	902, 1496, 1728, 1983
MvnI	CGCG	1 cut(s)	244
MwoI	GCNNNNNNNGC	4 cut(s)	558, 570, 906, 1582
NcoI	CCATGG	2 cut(s)	967, 2333
NdeII	GATC	8 cut(s)	54, 110, 634, 835, 1111, 1140, 1684, 1691
NlaIV	GGNNCC	8 cut(s)	112, 286, 1410, 1604, 1686, 1752, 1925, 2095
NmeAIII	GCCGAG	1 cut(s)	914
NmuCI	GTSAC	1 cut(s)	1271
NsiI	ATGCAT	1 cut(s)	586
NspI	RCATGY	3 cut(s)	588, 1108, 1831
NspV	TTCGAA	1 cut(s)	383
OliI	CACNNNNGTG	1 cut(s)	2123
PaeI	GCATGC	1 cut(s)	588
PagI	TCATGA	1 cut(s)	2266
PciI	ACATGT	1 cut(s)	1827
PciSI	GCTCTTC	1 cut(s)	1779
PdmI	GAANNNNTTC	3 cut(s)	76, 283, 711
PfeI	GAWTC	4 cut(s)	1122, 1265, 1295, 2401
PkrI	GCNGC	5 cut(s)	563, 851, 1252, 1887, 2428
PleI	GAGTC	2 cut(s)	1163, 1796
PpsI	GAGTC	2 cut(s)	1163, 1796
PpuMI	RGGWCCY	2 cut(s)	544, 1624
PscI	ACATGT	1 cut(s)	1827
PshAI	GACNNNNGTC	1 cut(s)	993
PsiI	TTATAA	1 cut(s)	2211
Psp1406I	AACGTT	1 cut(s)	76
Psp5II	RGGWCCY	2 cut(s)	544, 1624
Psp6I	CCWGG	4 cut(s)	900, 1494, 1726, 1981
PspFI	CCCAGC	2 cut(s)	31, 1404
PspGI	CCWGG	4 cut(s)	900, 1494, 1726, 1981
PspN4I	GGNNCC	8 cut(s)	112, 286, 1410, 1604, 1686, 1752, 1925, 2095
PspOMI	GGGCCC	3 cut(s)	1750, 1923, 2093
PspPPI	RGGWCCY	2 cut(s)	544, 1624
PstNI	CAGNNNCTG	1 cut(s)	655
PsuI	RGATCY	6 cut(s)	54, 110, 1111, 1140, 1684, 1691
RsaI	GTAC	6 cut(s)	61, 1459, 1679, 1869, 2055, 2416
RsaNI	GTAC	6 cut(s)	60, 1458, 1678, 1868, 2054, 2415
RseI	CAYNNNNRTG	2 cut(s)	1644, 2123
SalI	GTCGAC	1 cut(s)	2555
SapI	GCTCTTC	1 cut(s)	1779
SatI	GCNGC	5 cut(s)	562, 850, 1251, 1886, 2427
Sau3AI	GATC	8 cut(s)	54, 110, 634, 835, 1111, 1140, 1684, 1691
SchI	GAGTC	2 cut(s)	1164, 1796
ScrFI	CCNGG	4 cut(s)	902, 1496, 1728, 1983
SduI	GDGCHC	6 cut(s)	649, 1075, 1754, 1927, 2097, 2298
SexAI	ACCWGGT	2 cut(s)	1726, 1981
SfaNI	GCATC	6 cut(s)	100, 661, 896, 1045, 1572, 1825
SfuI	TTCGAA	1 cut(s)	383
SinI	GGWCC	3 cut(s)	544, 1015, 1624
SmiMI	CAYNNNNRTG	2 cut(s)	1644, 2123
SmlI	CTYRAG	7 cut(s)	702, 1115, 1586, 1964, 2405, 2525, 2595
SmoI	CTYRAG	7 cut(s)	702, 1115, 1586, 1964, 2405, 2525, 2595
SpeI	ACTAGT	1 cut(s)	2239
SphI	GCATGC	1 cut(s)	588
SsiI	CCGC	6 cut(s)	161, 244, 496, 562, 1499, 1636
SspI	AATATT	2 cut(s)	739, 1846
SspMI	CTAG	7 cut(s)	330, 1257, 1455, 1689, 2012, 2240, 2511
StyD4I	CCNGG	4 cut(s)	900, 1494, 1726, 1981
StyI	CCWWGG	3 cut(s)	967, 999, 2333
TaaI	ACNGT	6 cut(s)	266, 578, 920, 992, 1063, 1467
TaiI	ACGT	5 cut(s)	79, 1241, 2043, 2342, 2454
TaqI	TCGA	5 cut(s)	383, 742, 844, 1488, 2556
TaqII	GACCGA	1 cut(s)	2489
TatI	WGTACW	3 cut(s)	1677, 1867, 2414
TauI	GCSGC	1 cut(s)	564
TfiI	GAWTC	4 cut(s)	1122, 1265, 1295, 2401
TscAI	CASTG	3 cut(s)	1552, 1663, 1845
TseFI	GTSAC	1 cut(s)	1271
TseI	GCWGC	4 cut(s)	849, 1250, 1885, 2426
Tsp45I	GTSAC	1 cut(s)	1271
TspGWI	ACGGA	4 cut(s)	47, 407, 1697, 2456
TspRI	CASTG	3 cut(s)	1552, 1663, 1845
Vha464I	CTTAAG	2 cut(s)	1115, 1586
VpaK11BI	GGWCC	3 cut(s)	544, 1015, 1624
XbaI	TCTAGA	1 cut(s)	1256
XceI	RCATGY	3 cut(s)	588, 1108, 1831
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1419, 1492
XmiI	GTMKAC	1 cut(s)	2556
XmnI	GAANNNNTTC	3 cut(s)	76, 283, 711
XspI	CTAG	7 cut(s)	330, 1257, 1455, 1689, 2012, 2240, 2511
Zsp2I	ATGCAT	1 cut(s)	586

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.