lysine-specific demethylase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11950 AT1G11950 AT1G11950 AT1G62310 |
| fragaria_vesca | FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 |
| malus_domestica | MD05G1351300.v1.1 MD10G1325700.v1.1 |
| prunus_persica | Prupe.4G016300_v2.0.a1 |
| pyrus_communis | pycom05g31840 pycom10g27540 |
| rosa_chinensis | RchiOBHm_Chr5g0002371 |
| rosa_laevigata | RLG00000031023 |
| rosa_multiflora | Rmu_co8351855.1_g000001 Rmu_co8445921.1_g000001 Rmu_sc0006137.1_g000004 Rmu_sc0006137.1_g000005 Rmu_sc0017945.1_g000004 |
| rosa_rugosa | Rorug04G0395600 Rorug04G0395700.1 |
| rosa_samantha | Rh5AG018400 Rh5BG021100 Rh5CG020300 Rh5DG019300 |
| rosa_wichuraiana | Rw5G001730 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 911 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 233 |
| AccI | GTMKAC | 1 cut(s) | 1617 |
| AciI | CCGC | 4 cut(s) | 217, 706, 1260, 1613 |
| AclWI | GGATC | 2 cut(s) | 519, 1115 |
| AcoI | YGGCCR | 1 cut(s) | 379 |
| AcsI | RAATTY | 4 cut(s) | 110, 484, 839, 1453 |
| AcuI | CTGAAG | 3 cut(s) | 854, 1301, 1424 |
| AfaI | GTAC | 2 cut(s) | 675, 1106 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 233, 383, 1069, 1178, 1199 |
| AgsI | TTSAA | 9 cut(s) | 25, 243, 531, 875, 887, 972, 1082, 1398, 1531 |
| AjnI | CCWGG | 1 cut(s) | 376 |
| AluBI | AGCT | 8 cut(s) | 145, 239, 878, 993, 1151, 1369, 1438, 1625 |
| AluI | AGCT | 8 cut(s) | 145, 239, 878, 993, 1151, 1369, 1438, 1625 |
| Alw21I | GWGCWC | 2 cut(s) | 1240, 1480 |
| Alw26I | GTCTC | 1 cut(s) | 81 |
| AlwI | GGATC | 2 cut(s) | 519, 1115 |
| AoxI | GGCC | 4 cut(s) | 65, 70, 379, 1556 |
| ApaI | GGGCCC | 1 cut(s) | 1560 |
| ApeKI | GCWGC | 2 cut(s) | 993, 1257 |
| ApoI | RAATTY | 4 cut(s) | 110, 484, 839, 1453 |
| AspLEI | GCGC | 1 cut(s) | 805 |
| AspS9I | GGNCC | 5 cut(s) | 70, 154, 198, 1556, 1557 |
| AsuC2I | CCSGG | 1 cut(s) | 69 |
| AsuHPI | GGTGA | 7 cut(s) | 459, 1084, 1119, 1274, 1385, 1462, 1505 |
| AvaII | GGWCC | 2 cut(s) | 154, 198 |
| BaeGI | GKGCMC | 1 cut(s) | 1560 |
| BanII | GRGCYC | 2 cut(s) | 1423, 1560 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 511, 543 |
| BauI | CACGAG | 1 cut(s) | 103 |
| BbsI | GAAGAC | 1 cut(s) | 453 |
| Bbv12I | GWGCWC | 2 cut(s) | 1240, 1480 |
| BbvI | GCAGC | 2 cut(s) | 980, 1244 |
| BccI | CCATC | 5 cut(s) | 9, 481, 501, 1132, 1547 |
| BceAI | ACGGC | 1 cut(s) | 366 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 794, 828 |
| BciT130I | CCWGG | 1 cut(s) | 378 |
| BciVI | GTATCC | 2 cut(s) | 647, 669 |
| BclI | TGATCA | 1 cut(s) | 345 |
| BcnI | CCSGG | 1 cut(s) | 69 |
| BcoDI | GTCTC | 1 cut(s) | 81 |
| BfaI | CTAG | 1 cut(s) | 1370 |
| BfmI | CTRYAG | 1 cut(s) | 149 |
| BfuI | GTATCC | 2 cut(s) | 647, 669 |
| BisI | GCNGC | 3 cut(s) | 706, 994, 1258 |
| BlpI | GCTNAGC | 1 cut(s) | 792 |
| BlsI | GCNGC | 3 cut(s) | 707, 995, 1259 |
| Bme1390I | CCNGG | 2 cut(s) | 69, 378 |
| Bme18I | GGWCC | 2 cut(s) | 154, 198 |
| BmgT120I | GGNCC | 5 cut(s) | 70, 154, 198, 1556, 1557 |
| BmiI | GGNNCC | 4 cut(s) | 97, 199, 1536, 1558 |
| BmrFI | CCNGG | 2 cut(s) | 69, 378 |
| BmrI | ACTGGG | 2 cut(s) | 1188, 1209 |
| BmsI | GCATC | 5 cut(s) | 283, 512, 994, 1040, 1537 |
| BmuI | ACTGGG | 2 cut(s) | 1188, 1209 |
| BoxI | GACNNNNGTC | 1 cut(s) | 183 |
| BpiI | GAAGAC | 1 cut(s) | 453 |
| BpmI | CTGGAG | 4 cut(s) | 146, 210, 1137, 1494 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 792 |
| BpuEI | CTTGAG | 1 cut(s) | 1641 |
| BpuMI | CCSGG | 1 cut(s) | 69 |
| BsaBI | GATNNNNATC | 1 cut(s) | 984 |
| BsaJI | CCNNGG | 2 cut(s) | 382, 1644 |
| BsaWI | WCCGGW | 1 cut(s) | 200 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1222, 1252 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 233, 383, 1069, 1178, 1199 |
| Bse1I | ACTGG | 4 cut(s) | 129, 748, 1183, 1204 |
| Bse8I | GATNNNNATC | 1 cut(s) | 984 |
| BseBI | CCWGG | 1 cut(s) | 378 |
| BseDI | CCNNGG | 2 cut(s) | 382, 1644 |
| BseGI | GGATG | 5 cut(s) | 20, 175, 316, 685, 1055 |
| BseJI | GATNNNNATC | 1 cut(s) | 984 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 233, 383, 1069, 1178, 1199 |
| BseMII | CTCAG | 4 cut(s) | 38, 420, 806, 1472 |
| BseNI | ACTGG | 4 cut(s) | 129, 748, 1183, 1204 |
| BseRI | GAGGAG | 2 cut(s) | 155, 875 |
| BseSI | GKGCMC | 1 cut(s) | 1560 |
| BseXI | GCAGC | 2 cut(s) | 980, 1244 |
| BsgI | GTGCAG | 2 cut(s) | 1086, 1564 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1617 |
| BshFI | GGCC | 4 cut(s) | 67, 72, 381, 1558 |
| BsiEI | CGRYCG | 1 cut(s) | 1617 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1240, 1480 |
| BsiSI | CCGG | 3 cut(s) | 68, 99, 201 |
| BslFI | GGGAC | 2 cut(s) | 211, 782 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 233, 383, 1069, 1178, 1199 |
| BsmAI | GTCTC | 1 cut(s) | 81 |
| BsmFI | GGGAC | 2 cut(s) | 211, 782 |
| BsmI | GAATGC | 2 cut(s) | 42, 445 |
| BsnI | GGCC | 4 cut(s) | 67, 72, 381, 1558 |
| Bsp120I | GGGCCC | 1 cut(s) | 1556 |
| Bsp1286I | GDGCHC | 4 cut(s) | 1240, 1423, 1480, 1560 |
| Bsp143I | GATC | 5 cut(s) | 345, 390, 511, 979, 1120 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 792 |
| BspACI | CCGC | 4 cut(s) | 217, 706, 1260, 1613 |
| BspANI | GGCC | 4 cut(s) | 67, 72, 381, 1558 |
| BspCNI | CTCAG | 4 cut(s) | 39, 419, 805, 1471 |
| BspLI | GGNNCC | 4 cut(s) | 97, 199, 1536, 1558 |
| BspMAI | CTGCAG | 1 cut(s) | 153 |
| BspPI | GGATC | 2 cut(s) | 519, 1115 |
| BsrI | ACTGG | 4 cut(s) | 129, 748, 1183, 1204 |
| BssECI | CCNNGG | 2 cut(s) | 382, 1644 |
| BssMI | GATC | 5 cut(s) | 345, 390, 511, 979, 1120 |
| BssSI | CACGAG | 1 cut(s) | 103 |
| BssT1I | CCWWGG | 1 cut(s) | 1644 |
| Bst2BI | CACGAG | 1 cut(s) | 103 |
| Bst2UI | CCWGG | 1 cut(s) | 378 |
| Bst4CI | ACNGT | 5 cut(s) | 722, 962, 1064, 1336, 1470 |
| Bst6I | CTCTTC | 2 cut(s) | 159, 206 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 714 |
| BstC8I | GCNNGC | 1 cut(s) | 730 |
| BstDEI | CTNAG | 8 cut(s) | 47, 207, 406, 503, 792, 1022, 1144, 1458 |
| BstDSI | CCRYGG | 1 cut(s) | 382 |
| BstF5I | GGATG | 5 cut(s) | 20, 175, 316, 685, 1055 |
| BstHHI | GCGC | 1 cut(s) | 805 |
| BstKTI | GATC | 5 cut(s) | 348, 393, 514, 982, 1123 |
| BstMAI | GTCTC | 1 cut(s) | 81 |
| BstMBI | GATC | 5 cut(s) | 345, 390, 511, 979, 1120 |
| BstMCI | CGRYCG | 1 cut(s) | 1617 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 702, 714, 802, 1266, 1649 |
| BstNI | CCWGG | 1 cut(s) | 378 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 183 |
| BstSCI | CCNGG | 2 cut(s) | 67, 376 |
| BstSFI | CTRYAG | 1 cut(s) | 149 |
| BstSLI | GKGCMC | 1 cut(s) | 1560 |
| BstV1I | GCAGC | 2 cut(s) | 980, 1244 |
| BstV2I | GAAGAC | 1 cut(s) | 453 |
| BstX2I | RGATCY | 1 cut(s) | 1120 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 743 |
| BstYI | RGATCY | 1 cut(s) | 1120 |
| BsuI | GTATCC | 2 cut(s) | 647, 669 |
| BsuRI | GGCC | 4 cut(s) | 67, 72, 381, 1558 |
| BtgI | CCRYGG | 1 cut(s) | 382 |
| BtsCI | GGATG | 5 cut(s) | 20, 175, 316, 685, 1055 |
| BtsIMutI | CAGTG | 3 cut(s) | 414, 581, 958 |
| Cac8I | GCNNGC | 1 cut(s) | 730 |
| CfoI | GCGC | 1 cut(s) | 805 |
| Cfr13I | GGNCC | 5 cut(s) | 70, 154, 198, 1556, 1557 |
| Csp6I | GTAC | 2 cut(s) | 674, 1105 |
| CviAII | CATG | 7 cut(s) | 131, 323, 538, 667, 748, 820, 1112 |
| CviQI | GTAC | 2 cut(s) | 674, 1105 |
| DdeI | CTNAG | 8 cut(s) | 47, 207, 406, 503, 792, 1022, 1144, 1458 |
| DpnI | GATC | 5 cut(s) | 347, 392, 513, 981, 1122 |
| DpnII | GATC | 5 cut(s) | 345, 390, 511, 979, 1120 |
| EaeI | YGGCCR | 1 cut(s) | 379 |
| Eam1104I | CTCTTC | 2 cut(s) | 159, 206 |
| EarI | CTCTTC | 2 cut(s) | 159, 206 |
| Eco130I | CCWWGG | 1 cut(s) | 1644 |
| Eco24I | GRGCYC | 2 cut(s) | 1423, 1560 |
| Eco47I | GGWCC | 2 cut(s) | 154, 198 |
| Eco57I | CTGAAG | 3 cut(s) | 854, 1301, 1424 |
| EcoRI | GAATTC | 3 cut(s) | 110, 484, 1453 |
| EcoRII | CCWGG | 1 cut(s) | 376 |
| EcoT14I | CCWWGG | 1 cut(s) | 1644 |
| EcoT38I | GRGCYC | 2 cut(s) | 1423, 1560 |
| ErhI | CCWWGG | 1 cut(s) | 1644 |
| FaeI | CATG | 7 cut(s) | 134, 326, 541, 670, 751, 823, 1115 |
| FaqI | GGGAC | 2 cut(s) | 211, 782 |
| FatI | CATG | 7 cut(s) | 130, 322, 537, 666, 747, 819, 1111 |
| FbaI | TGATCA | 1 cut(s) | 345 |
| FblI | GTMKAC | 1 cut(s) | 1617 |
| Fnu4HI | GCNGC | 3 cut(s) | 706, 994, 1258 |
| FokI | GGATG | 5 cut(s) | 27, 182, 323, 692, 1062 |
| FriOI | GRGCYC | 2 cut(s) | 1423, 1560 |
| Fsp4HI | GCNGC | 3 cut(s) | 706, 994, 1258 |
| FspBI | CTAG | 1 cut(s) | 1370 |
| GlaI | GCGC | 1 cut(s) | 804 |
| GluI | GCNGC | 3 cut(s) | 706, 994, 1258 |
| GsuI | CTGGAG | 4 cut(s) | 146, 210, 1137, 1494 |
| HaeIII | GGCC | 4 cut(s) | 67, 72, 381, 1558 |
| HapII | CCGG | 3 cut(s) | 68, 99, 201 |
| HhaI | GCGC | 1 cut(s) | 805 |
| Hin1II | CATG | 7 cut(s) | 134, 326, 541, 670, 751, 823, 1115 |
| Hin6I | GCGC | 1 cut(s) | 803 |
| HinP1I | GCGC | 1 cut(s) | 803 |
| HincII | GTYRAC | 1 cut(s) | 1618 |
| HindII | GTYRAC | 1 cut(s) | 1618 |
| HinfI | GANTC | 5 cut(s) | 413, 431, 587, 893, 1287 |
| HpaII | CCGG | 3 cut(s) | 68, 99, 201 |
| HphI | GGTGA | 7 cut(s) | 459, 1084, 1119, 1274, 1385, 1462, 1505 |
| Hpy166II | GTNNAC | 2 cut(s) | 222, 1618 |
| Hpy188I | TCNGA | 8 cut(s) | 48, 118, 163, 483, 834, 847, 1281, 1443 |
| Hpy188III | TCNNGA | 7 cut(s) | 227, 417, 531, 1154, 1464, 1473, 1538 |
| Hpy8I | GTNNAC | 2 cut(s) | 222, 1618 |
| HpyAV | CCTTC | 9 cut(s) | 53, 57, 169, 360, 535, 664, 829, 1301, 1525 |
| HpyCH4III | ACNGT | 5 cut(s) | 722, 962, 1064, 1336, 1470 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 702, 714, 802, 1266, 1649 |
| HpyF3I | CTNAG | 8 cut(s) | 47, 207, 406, 503, 792, 1022, 1144, 1458 |
| Hsp92II | CATG | 7 cut(s) | 134, 326, 541, 670, 751, 823, 1115 |
| HspAI | GCGC | 1 cut(s) | 803 |
| Ksp22I | TGATCA | 1 cut(s) | 345 |
| Kzo9I | GATC | 5 cut(s) | 345, 390, 511, 979, 1120 |
| LmnI | GCTCC | 9 cut(s) | 127, 142, 236, 319, 614, 821, 1156, 1243, 1475 |
| Lsp1109I | GCAGC | 2 cut(s) | 980, 1244 |
| LweI | GCATC | 5 cut(s) | 283, 512, 994, 1040, 1537 |
| MaeI | CTAG | 1 cut(s) | 1370 |
| MaeIII | GTNAC | 2 cut(s) | 120, 929 |
| MalI | GATC | 5 cut(s) | 347, 392, 513, 981, 1122 |
| MboI | GATC | 5 cut(s) | 345, 390, 511, 979, 1120 |
| MboII | GAAGA | 9 cut(s) | 68, 176, 223, 302, 453, 456, 468, 1508, 1553 |
| MfeI | CAATTG | 1 cut(s) | 972 |
| MflI | RGATCY | 1 cut(s) | 1120 |
| MhlI | GDGCHC | 4 cut(s) | 1240, 1423, 1480, 1560 |
| MlyI | GAGTC | 2 cut(s) | 440, 902 |
| MmeI | TCCRAC | 1 cut(s) | 927 |
| MnlI | CCTC | 9 cut(s) | 133, 160, 207, 286, 672, 743, 853, 935, 1063 |
| MseI | TTAA | 7 cut(s) | 305, 423, 564, 753, 809, 1338, 1629 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1132 |
| MspI | CCGG | 3 cut(s) | 68, 99, 201 |
| MspR9I | CCNGG | 2 cut(s) | 69, 378 |
| MunI | CAATTG | 1 cut(s) | 972 |
| Mva1269I | GAATGC | 2 cut(s) | 42, 445 |
| MvaI | CCWGG | 1 cut(s) | 378 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 702, 714, 802, 1266, 1649 |
| NciI | CCSGG | 1 cut(s) | 69 |
| NdeII | GATC | 5 cut(s) | 345, 390, 511, 979, 1120 |
| NlaIII | CATG | 7 cut(s) | 134, 326, 541, 670, 751, 823, 1115 |
| NlaIV | GGNNCC | 4 cut(s) | 97, 199, 1536, 1558 |
| PctI | GAATGC | 2 cut(s) | 42, 445 |
| PfeI | GAWTC | 3 cut(s) | 413, 587, 1287 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 233 |
| PkrI | GCNGC | 3 cut(s) | 707, 995, 1259 |
| PleI | GAGTC | 2 cut(s) | 439, 901 |
| PpsI | GAGTC | 2 cut(s) | 439, 901 |
| PshAI | GACNNNNGTC | 1 cut(s) | 183 |
| PsiI | TTATAA | 1 cut(s) | 911 |
| Psp6I | CCWGG | 1 cut(s) | 376 |
| PspGI | CCWGG | 1 cut(s) | 376 |
| PspN4I | GGNNCC | 4 cut(s) | 97, 199, 1536, 1558 |
| PspOMI | GGGCCC | 1 cut(s) | 1556 |
| PspPI | GGNCC | 5 cut(s) | 70, 154, 198, 1556, 1557 |
| PstI | CTGCAG | 1 cut(s) | 153 |
| PsuI | RGATCY | 1 cut(s) | 1120 |
| RsaI | GTAC | 2 cut(s) | 675, 1106 |
| RsaNI | GTAC | 2 cut(s) | 674, 1105 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1132 |
| SalI | GTCGAC | 1 cut(s) | 1616 |
| SaqAI | TTAA | 7 cut(s) | 305, 423, 564, 753, 809, 1338, 1629 |
| SatI | GCNGC | 3 cut(s) | 706, 994, 1258 |
| Sau3AI | GATC | 5 cut(s) | 345, 390, 511, 979, 1120 |
| Sau96I | GGNCC | 5 cut(s) | 70, 154, 198, 1556, 1557 |
| SchI | GAGTC | 2 cut(s) | 440, 902 |
| ScrFI | CCNGG | 2 cut(s) | 69, 378 |
| SduI | GDGCHC | 4 cut(s) | 1240, 1423, 1480, 1560 |
| SfaNI | GCATC | 5 cut(s) | 283, 512, 994, 1040, 1537 |
| SfcI | CTRYAG | 1 cut(s) | 149 |
| SinI | GGWCC | 2 cut(s) | 154, 198 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1132 |
| SmlI | CTYRAG | 1 cut(s) | 1656 |
| SmoI | CTYRAG | 1 cut(s) | 1656 |
| SsiI | CCGC | 4 cut(s) | 217, 706, 1260, 1613 |
| SspI | AATATT | 2 cut(s) | 883, 1342 |
| SspMI | CTAG | 1 cut(s) | 1370 |
| StyD4I | CCNGG | 2 cut(s) | 67, 376 |
| StyI | CCWWGG | 1 cut(s) | 1644 |
| TaaI | ACNGT | 5 cut(s) | 722, 962, 1064, 1336, 1470 |
| TaqI | TCGA | 2 cut(s) | 988, 1617 |
| TatI | WGTACW | 1 cut(s) | 1104 |
| TauI | GCSGC | 1 cut(s) | 708 |
| TfiI | GAWTC | 3 cut(s) | 413, 587, 1287 |
| Tru1I | TTAA | 7 cut(s) | 305, 423, 564, 753, 809, 1338, 1629 |
| Tru9I | TTAA | 7 cut(s) | 305, 423, 564, 753, 809, 1338, 1629 |
| TscAI | CASTG | 3 cut(s) | 414, 581, 965 |
| TseI | GCWGC | 2 cut(s) | 993, 1257 |
| TspGWI | ACGGA | 3 cut(s) | 376, 629, 1598 |
| TspRI | CASTG | 3 cut(s) | 414, 581, 965 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 233 |
| VpaK11BI | GGWCC | 2 cut(s) | 154, 198 |
| XapI | RAATTY | 4 cut(s) | 110, 484, 839, 1453 |
| XmiI | GTMKAC | 1 cut(s) | 1617 |
| XspI | CTAG | 1 cut(s) | 1370 |