Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0004714

Physical Location & Seq

Genomic Coordinates Forward (+)

1559734 .. 1564252

Gene Structure 4519 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG021100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGGGATTGAATTATGGGTTTTTAGGATGGGTTTATGCCAGGGAGGTATTGAGAATGCAAGTTCTGAGAGTGGAAGAAGGAAGGCCGGGCCAATATAGTGATAAAGATATTGGTTCCGGTAAGAGAGAATTCTCGGAGTTACTGGAGCATGAAAAGGAGGAGCTACTGCAGGACCAATCAGAAGAGGATGAGAAGGACAATGGTCGCTTACAGGGGACCGGAACTAAGAAGAGACGGTTTACTCCAGAAATTGGAGCTTCAAATGGAAAAAGAATTAGAAAAAAGCAACCTGCCTCAAACTATTATGAAGATGCAGATGAGTTAATGGATGAAATGGAGCATGACACAGAAATTGCCTTTATGATCAAGTCAAAAGCACGGAGAAGGGGAAGTCCTGGCCGTGGAAAGATCAACAGGAGTTCCTCAGTGGATTCAGGAGTTAAAGATGAGTCAAAGAATACTACTTCTTATACTTCGTCTTCTTCACCACCATCTTCTCCGAATTCATCAGTTTCAGTTCTAAGATGGGATCGTGGTAGATGCACTTCAAGACACATAAAGGATAATGGAGATGTTTGTTTTAAGTGTCATCAGTGTATGCAAGAATCAAAAACTATTGTTTCTTGCTCCAAGTGTAAAAACAACTCTTATTGTATCCGTTGTATCAAGGAATGGTATCCTCACATGAAGGTACAGGAAGTCAAGGAACTTTGCCCATTTTGCCGCAGAAATTGCAACTGTAATGCTTGCCTCCACTCAACTGGCATGATTAAGACACCAAAACGGGACATAAGCGACTACGAAAAGGCTCAGCATTTGGCGCATTTAATTCGCTCCATGCTTCCATTTCTGAAGGAACTTTCTGATGAACAAAAGGAGGAGATACAGATCGAAGCTAATATTCAAGGAGAGTCGCTTTCCAACATTATAATAGAACAAACCCTCTGTTACAATGATGAGCGTGTCTATTGCAACCACTGTGCAACTTCAATTGTTGATCTCCATCGAAGCTGCCCTAAATGTCTATATGAACTCTGTCTAAGTTGTTGTAGAGAAATTAGGCAGGGATTCCTTTTAGACCGTGCAGAGGTGAAGTTTCAATATAGGAATATGGGTTGTGAGTACATTCATGGTGGAGATCCATCACCTGAATGTTGTTCCTTAGAAGCTCCAGACAATCATATTGAGCCTTTGACTGGGTGGAATGAGCCTTTGACTGGGTGGAATGCAAATGATGATAATAGTATTACTTGTGCTCCAAAGGAAATGGGTGGCTGCGGTGAGAGCAACTTGGCTCTGAAGCGAATCCTTCCTTGTGATTGGATTGCAAGTTTAGAAGCAAAAGCCAAAACTGTACTAGACATTTGCGAAACCAAGTACTGTACTTTCAAGCATGAATGTGGTGAAAGAATTGATATGTTGCGAAAGGCAGCTTCTAGGGAGGATTCTTGTGACAACTTCTTATATTGTCCAGATTCAAGGGACACTCTGAAAGAAGGAGATCTTTTGCACTTCAGAAAACATTGGATTAATGGTGAACCAGTCATAGTTCAAAATGTACTTGAACAGGCAAATGGTCTGAGCTGGGAGCCAATGGTCATGTGGCGTGCTTTAAGTGAAAATATGGATCCAAATAGTACCTCACAATTTTCAGAGGTCAAGACCATTGATTGCCTGGCTGGCTGTGAGGTGGAAATAAATACTCGGCAATTTTTTGAAGGATATACGGAAGGAAGAATGTATGGAAATTTGTGGCCAGAGATGCTTAAGCTGAAGGATTGGCCCCCTTCTGATAAGTTTGAGAATCTTTTGCCCCGACATTGTGATGAATTTATTACTGCCCTGCCATTTCAAGAGTACACAGATCCTAGAGCTGGACTTCTTAACCTTGCTGTTAAGTTGCCACCTGGAGTCTTGAAACCAGACATGGGTCCAAAAACATATATTGCTTATGGGCTTGTGGAAGAGCTTGGAAGAGGGGATTCCGTAACCAAGCTGCATTGTGATATGTCTGATGCGGTTAATATTTTGACACATACAGCAGAAATAAAGCTAGGTGATGAGCAGAAATCTGCAATTTCAATGCTAAAAGAATTACATAGAGCCCAAGATGAGAGAGAGCTTCGGAATTGGGTGAATTCTCAGTCTGGACAGTCTGGAGGGGATGAAGAAATCATAGAAAAGAATTACAATAGGGAATTGAAGGTTCCAGAAGATGATGCAGATGGGCCCACTCTTTCTGGTTCTCCCTGCACGGAAGCAGTAGAGGAAACCGGTGGTGCTTTGTGGGACATTTTTCGCAGGGAAGATGTCCCTAAGTTGGAGGCTTATCTGAAGAAGCACTATAAAGAATTCAGGCACACTTACTGTTCATTAGTTGAACGGGTTATTCATCCAATTCATGATCAATCCTTTTATTTGACAATGGATCACAAAAGGAAGCTTAAGGAAGAATTTGGAGTCGAACCATGGACATTTGTACAAAGCCTTGGAGAGGCTGTATTTATACCTGCTGGATGCCCACACCAAGTTAGGAATCTCAAGTCTTGTACAAAAGTAGCTGTAGACTTTGTATCCCCAGAAAATGTCCATGAGTGCCTCCGTTTAACTAAGGACTTCAGACAGCTTCCCAAGAATCATAGAGCTAGAGAGGACAAACTTGAGATAAAGAAAATGATACTATATGCGGTCGACCAAGCTGTTAAAGATTTGGAAGCCTCGGTAGCAACTCAAGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0000976 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0006325 GO:0006355 GO:0006464 GO:0006482 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008214 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016569 GO:0016570 GO:0016577 GO:0019219 GO:0019222 GO:0019538 GO:0031323 GO:0031326 GO:0031490 GO:0031974 GO:0031981 GO:0032451 GO:0032452 GO:0032454 GO:0033169 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0070013 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0097159 GO:0140096 GO:1901363 GO:1901564 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04714 map04714

Pfam Domains

Protein Families

JmjC zf-4CXXC_R1

Protein Analysis

912

Amino Acids

104.15

Weight (kDa)

5.69

Isoelectric Point (pI)

53.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
JmjC	PF02373	743 - 857	9.1e-15	JmjC domain, hydroxylase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0004714)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11950 AT1G11950 AT1G11950 AT1G62310
fragaria_vesca	FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550 FvH4_3g01550
malus_domestica	MD05G1351300.v1.1 MD10G1325700.v1.1
prunus_persica	Prupe.4G016300_v2.0.a1
pyrus_communis	pycom05g31840 pycom10g27540
rosa_chinensis	RchiOBHm_Chr5g0002371
rosa_laevigata	RLG00000031023
rosa_multiflora	Rmu_co8351855.1_g000001 Rmu_co8445921.1_g000001 Rmu_sc0006137.1_g000004 Rmu_sc0006137.1_g000005 Rmu_sc0017945.1_g000004
rosa_rugosa	Rorug04G0395600 Rorug04G0395700.1
rosa_samantha	Rh5AG018400 Rh5BG021100 Rh5CG020300 Rh5DG019300
rosa_wichuraiana	Rw5G001730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	929
Acc36I	ACCTGC	2 cut(s)	298, 2518
AccB7I	CCANNNNNTGG	1 cut(s)	251
AccI	GTMKAC	2 cut(s)	2565, 2691
AciI	CCGC	4 cut(s)	724, 1278, 2018, 2687
AclWI	GGATC	6 cut(s)	537, 1133, 1622, 1635, 1859, 2436
AcoI	YGGCCR	2 cut(s)	397, 1754
AcsI	RAATTY	7 cut(s)	128, 502, 1747, 1829, 2137, 2351, 2453
AcuI	CTGAAG	6 cut(s)	872, 1319, 1498, 1793, 2354, 2602
AfiI	CCNNNNNNNGG	9 cut(s)	251, 401, 1087, 1196, 1217, 1874, 1928, 2320, 2494
AflII	CTTAAG	2 cut(s)	1766, 2444
AgeI	ACCGGT	1 cut(s)	2273
AjnI	CCWGG	4 cut(s)	38, 394, 1674, 1906
Alw21I	GWGCWC	1 cut(s)	1258
Alw26I	GTCTC	1 cut(s)	226
AlwI	GGATC	6 cut(s)	537, 1133, 1622, 1635, 1859, 2436
AoxI	GGCC	6 cut(s)	83, 88, 397, 1754, 1781, 2228
ApaI	GGGCCC	1 cut(s)	2232
ApeKI	GCWGC	4 cut(s)	1011, 1275, 1430, 1996
ApoI	RAATTY	7 cut(s)	128, 502, 1747, 1829, 2137, 2351, 2453
AseI	ATTAAT	1 cut(s)	1530
AsiGI	ACCGGT	1 cut(s)	2273
AspLEI	GCGC	1 cut(s)	823
AspS9I	GGNCC	7 cut(s)	88, 172, 216, 1782, 1931, 2228, 2229
AsuC2I	CCSGG	1 cut(s)	87
AsuHPI	GGTGA	8 cut(s)	477, 1102, 1137, 1292, 1415, 1547, 2069, 2146
AvaII	GGWCC	3 cut(s)	172, 216, 1931
BaeGI	GKGCMC	1 cut(s)	2232
BalI	TGGCCA	1 cut(s)	1756
BamHI	GGATCC	1 cut(s)	1627
BanII	GRGCYC	2 cut(s)	2107, 2232
BarI	GAAGNNNNNNTAC	2 cut(s)	529, 561
BbsI	GAAGAC	1 cut(s)	471
Bbv12I	GWGCWC	1 cut(s)	1258
BbvI	GCAGC	4 cut(s)	998, 1262, 1442, 1983
BccI	CCATC	6 cut(s)	21, 499, 519, 1011, 1150, 2219
BceAI	ACGGC	1 cut(s)	384
BcgI	CGANNNNNNTGC	2 cut(s)	812, 846
BciT130I	CCWGG	4 cut(s)	40, 396, 1676, 1908
BciVI	GTATCC	3 cut(s)	665, 687, 2584
BclI	TGATCA	2 cut(s)	363, 2404
BcnI	CCSGG	1 cut(s)	87
BcoDI	GTCTC	1 cut(s)	226
BfaI	CTAG	5 cut(s)	1358, 1437, 1869, 2054, 2646
BfmI	CTRYAG	2 cut(s)	167, 2562
BfrI	CTTAAG	2 cut(s)	1766, 2444
BfuAI	ACCTGC	2 cut(s)	298, 2518
BfuI	GTATCC	3 cut(s)	665, 687, 2584
BglI	GCCNNNNNGGC	1 cut(s)	1680
BglII	AGATCT	1 cut(s)	1501
BisI	GCNGC	5 cut(s)	724, 1012, 1276, 1431, 1997
BlpI	GCTNAGC	1 cut(s)	810
BlsI	GCNGC	5 cut(s)	725, 1013, 1277, 1432, 1998
BmcAI	AGTACT	1 cut(s)	1379
Bme1390I	CCNGG	5 cut(s)	40, 87, 396, 1676, 1908
Bme18I	GGWCC	3 cut(s)	172, 216, 1931
BmgT120I	GGNCC	7 cut(s)	88, 172, 216, 1782, 1931, 2228, 2229
BmiI	GGNNCC	8 cut(s)	115, 217, 1590, 1629, 1784, 1932, 2208, 2230
BmrFI	CCNGG	5 cut(s)	40, 87, 396, 1676, 1908
BmrI	ACTGGG	2 cut(s)	1206, 1227
BmsI	GCATC	6 cut(s)	301, 530, 1752, 2005, 2209, 2507
BmuI	ACTGGG	2 cut(s)	1206, 1227
BoxI	GACNNNNGTC	2 cut(s)	201, 1929
BpiI	GAAGAC	1 cut(s)	471
BpmI	CTGGAG	5 cut(s)	164, 228, 1155, 1929, 2178
Bpu1102I	GCTNAGC	1 cut(s)	810
BpuEI	CTTGAG	3 cut(s)	2525, 2681, 2715
BpuMI	CCSGG	1 cut(s)	87
BsaBI	GATNNNNATC	2 cut(s)	887, 1002
BsaJI	CCNNGG	5 cut(s)	39, 400, 2468, 2488, 2718
BsaWI	WCCGGW	3 cut(s)	116, 218, 2273
BsaXI	ACNNNNNCTCC	4 cut(s)	1240, 1270, 2484, 2514
Bsc4I	CCNNNNNNNGG	9 cut(s)	251, 401, 1087, 1196, 1217, 1874, 1928, 2320, 2494
Bse118I	RCCGGY	1 cut(s)	2273
Bse1I	ACTGG	5 cut(s)	147, 766, 1201, 1222, 1541
Bse8I	GATNNNNATC	2 cut(s)	887, 1002
BseBI	CCWGG	4 cut(s)	40, 396, 1676, 1908
BseDI	CCNNGG	5 cut(s)	39, 400, 2468, 2488, 2718
BseGI	GGATG	6 cut(s)	32, 193, 334, 2170, 2392, 2522
BseJI	GATNNNNATC	2 cut(s)	887, 1002
BseLI	CCNNNNNNNGG	9 cut(s)	251, 401, 1087, 1196, 1217, 1874, 1928, 2320, 2494
BseMII	CTCAG	5 cut(s)	56, 438, 824, 1571, 2156
BseNI	ACTGG	5 cut(s)	147, 766, 1201, 1222, 1541
BseRI	GAGGAG	2 cut(s)	173, 893
BseSI	GKGCMC	1 cut(s)	2232
BseXI	GCAGC	4 cut(s)	998, 1262, 1442, 1983
BseYI	CCCAGC	1 cut(s)	1584
BsgI	GTGCAG	2 cut(s)	1104, 2236
Bsh1285I	CGRYCG	1 cut(s)	2691
BshFI	GGCC	6 cut(s)	85, 90, 399, 1756, 1783, 2230
BshTI	ACCGGT	1 cut(s)	2273
BsiEI	CGRYCG	1 cut(s)	2691
BsiHKAI	GWGCWC	1 cut(s)	1258
BsiSI	CCGG	4 cut(s)	86, 117, 219, 2274
BslFI	GGGAC	5 cut(s)	229, 800, 1496, 2297, 2303
BslI	CCNNNNNNNGG	9 cut(s)	251, 401, 1087, 1196, 1217, 1874, 1928, 2320, 2494
BsmAI	GTCTC	1 cut(s)	226
BsmBI	CGTCTC	1 cut(s)	226
BsmFI	GGGAC	5 cut(s)	229, 800, 1496, 2297, 2303
BsmI	GAATGC	2 cut(s)	60, 1231
BsnI	GGCC	6 cut(s)	85, 90, 399, 1756, 1783, 2230
Bsp120I	GGGCCC	1 cut(s)	2228
Bsp1286I	GDGCHC	3 cut(s)	1258, 2107, 2232
Bsp1407I	TGTACA	2 cut(s)	2479, 2549
Bsp1720I	GCTNAGC	1 cut(s)	810
Bsp19I	CCATGG	1 cut(s)	2468
BspACI	CCGC	4 cut(s)	724, 1278, 2018, 2687
BspANI	GGCC	6 cut(s)	85, 90, 399, 1756, 1783, 2230
BspCNI	CTCAG	5 cut(s)	57, 437, 823, 1572, 2155
BspHI	TCATGA	1 cut(s)	2401
BspLI	GGNNCC	8 cut(s)	115, 217, 1590, 1629, 1784, 1932, 2208, 2230
BspMAI	CTGCAG	1 cut(s)	171
BspMI	ACCTGC	2 cut(s)	298, 2518
BspPI	GGATC	6 cut(s)	537, 1133, 1622, 1635, 1859, 2436
BspQI	GCTCTTC	1 cut(s)	1959
BspTI	CTTAAG	2 cut(s)	1766, 2444
BsrFI	RCCGGY	1 cut(s)	2273
BsrGI	TGTACA	2 cut(s)	2479, 2549
BsrI	ACTGG	5 cut(s)	147, 766, 1201, 1222, 1541
BssAI	RCCGGY	1 cut(s)	2273
BssECI	CCNNGG	5 cut(s)	39, 400, 2468, 2488, 2718
BssT1I	CCWWGG	2 cut(s)	2468, 2488
Bst2UI	CCWGG	4 cut(s)	40, 396, 1676, 1908
Bst4CI	ACNGT	8 cut(s)	237, 740, 980, 1082, 1354, 1382, 2154, 2369
Bst6I	CTCTTC	4 cut(s)	177, 224, 1959, 1969
BstAFI	CTTAAG	2 cut(s)	1766, 2444
BstAPI	GCANNNNNTGC	1 cut(s)	732
BstAUI	TGTACA	2 cut(s)	2479, 2549
BstC8I	GCNNGC	3 cut(s)	748, 1608, 1681
BstDSI	CCRYGG	2 cut(s)	400, 2468
BstENI	CCTNNNNNAGG	1 cut(s)	2492
BstF5I	GGATG	6 cut(s)	32, 193, 334, 2170, 2392, 2522
BstHHI	GCGC	1 cut(s)	823
BstMAI	GTCTC	1 cut(s)	226
BstMCI	CGRYCG	1 cut(s)	2691
BstMWI	GCNNNNNNNGC	7 cut(s)	720, 732, 820, 1284, 1680, 1762, 2723
BstNI	CCWGG	4 cut(s)	40, 396, 1676, 1908
BstPAI	GACNNNNGTC	2 cut(s)	201, 1929
BstSCI	CCNGG	5 cut(s)	38, 85, 394, 1674, 1906
BstSFI	CTRYAG	2 cut(s)	167, 2562
BstSLI	GKGCMC	1 cut(s)	2232
BstV1I	GCAGC	4 cut(s)	998, 1262, 1442, 1983
BstV2I	GAAGAC	1 cut(s)	471
BstX2I	RGATCY	4 cut(s)	1138, 1501, 1627, 1864
BstXI	CCANNNNNNTGG	1 cut(s)	761
BstYI	RGATCY	4 cut(s)	1138, 1501, 1627, 1864
BsuI	GTATCC	3 cut(s)	665, 687, 2584
BsuRI	GGCC	6 cut(s)	85, 90, 399, 1756, 1783, 2230
BtgI	CCRYGG	2 cut(s)	400, 2468
BtsCI	GGATG	6 cut(s)	32, 193, 334, 2170, 2392, 2522
BtsIMutI	CAGTG	3 cut(s)	432, 599, 976
BveI	ACCTGC	2 cut(s)	298, 2518
Cac8I	GCNNGC	3 cut(s)	748, 1608, 1681
CciI	TCATGA	1 cut(s)	2401
CfoI	GCGC	1 cut(s)	823
Cfr10I	RCCGGY	1 cut(s)	2273
Cfr13I	GGNCC	7 cut(s)	88, 172, 216, 1782, 1931, 2228, 2229
CspAI	ACCGGT	1 cut(s)	2273
EaeI	YGGCCR	2 cut(s)	397, 1754
Eam1104I	CTCTTC	4 cut(s)	177, 224, 1959, 1969
EarI	CTCTTC	4 cut(s)	177, 224, 1959, 1969
Eco130I	CCWWGG	2 cut(s)	2468, 2488
Eco24I	GRGCYC	2 cut(s)	2107, 2232
Eco47I	GGWCC	3 cut(s)	172, 216, 1931
Eco57I	CTGAAG	6 cut(s)	872, 1319, 1498, 1793, 2354, 2602
EcoNI	CCTNNNNNAGG	1 cut(s)	2492
EcoRI	GAATTC	4 cut(s)	128, 502, 2137, 2351
EcoRII	CCWGG	4 cut(s)	38, 394, 1674, 1906
EcoT14I	CCWWGG	2 cut(s)	2468, 2488
EcoT38I	GRGCYC	2 cut(s)	2107, 2232
ErhI	CCWWGG	2 cut(s)	2468, 2488
Esp3I	CGTCTC	1 cut(s)	226
FalI	AAGNNNNNCTT	2 cut(s)	1488, 1520
FaqI	GGGAC	5 cut(s)	229, 800, 1496, 2297, 2303
FbaI	TGATCA	2 cut(s)	363, 2404
FblI	GTMKAC	2 cut(s)	2565, 2691
Fnu4HI	GCNGC	5 cut(s)	724, 1012, 1276, 1431, 1997
FokI	GGATG	6 cut(s)	39, 200, 341, 2177, 2379, 2529
FriOI	GRGCYC	2 cut(s)	2107, 2232
Fsp4HI	GCNGC	5 cut(s)	724, 1012, 1276, 1431, 1997
FspBI	CTAG	5 cut(s)	1358, 1437, 1869, 2054, 2646
GlaI	GCGC	1 cut(s)	822
GluI	GCNGC	5 cut(s)	724, 1012, 1276, 1431, 1997
GsaI	CCCAGC	1 cut(s)	1588
GsuI	CTGGAG	5 cut(s)	164, 228, 1155, 1929, 2178
HaeIII	GGCC	6 cut(s)	85, 90, 399, 1756, 1783, 2230
HapII	CCGG	4 cut(s)	86, 117, 219, 2274
HhaI	GCGC	1 cut(s)	823
Hin6I	GCGC	1 cut(s)	821
HinP1I	GCGC	1 cut(s)	821
HincII	GTYRAC	1 cut(s)	2692
HindII	GTYRAC	1 cut(s)	2692
HindIII	AAGCTT	1 cut(s)	2441
HpaII	CCGG	4 cut(s)	86, 117, 219, 2274
HphI	GGTGA	8 cut(s)	477, 1102, 1137, 1292, 1415, 1547, 2069, 2146
Hpy166II	GTNNAC	5 cut(s)	240, 1538, 1860, 2566, 2692
Hpy8I	GTNNAC	5 cut(s)	240, 1538, 1860, 2566, 2692
HpyCH4III	ACNGT	8 cut(s)	237, 740, 980, 1082, 1354, 1382, 2154, 2369
HpyF10VI	GCNNNNNNNGC	7 cut(s)	720, 732, 820, 1284, 1680, 1762, 2723
HspAI	GCGC	1 cut(s)	821
Ksp22I	TGATCA	2 cut(s)	363, 2404
LguI	GCTCTTC	1 cut(s)	1959
LmnI	GCTCC	9 cut(s)	145, 160, 254, 337, 632, 839, 1174, 1261, 1588
Lsp1109I	GCAGC	4 cut(s)	998, 1262, 1442, 1983
LweI	GCATC	6 cut(s)	301, 530, 1752, 2005, 2209, 2507
MaeI	CTAG	5 cut(s)	1358, 1437, 1869, 2054, 2646
MaeIII	GTNAC	4 cut(s)	138, 947, 1451, 1987
MfeI	CAATTG	1 cut(s)	990
MflI	RGATCY	4 cut(s)	1138, 1501, 1627, 1864
MhlI	GDGCHC	3 cut(s)	1258, 2107, 2232
MlsI	TGGCCA	1 cut(s)	1756
MluNI	TGGCCA	1 cut(s)	1756
MlyI	GAGTC	4 cut(s)	458, 920, 1920, 2469
MmeI	TCCRAC	2 cut(s)	945, 2301
Mox20I	TGGCCA	1 cut(s)	1756
MscI	TGGCCA	1 cut(s)	1756
MslI	CAYNNNNRTG	3 cut(s)	1150, 1398, 1824
Msp20I	TGGCCA	1 cut(s)	1756
MspCI	CTTAAG	2 cut(s)	1766, 2444
MspI	CCGG	4 cut(s)	86, 117, 219, 2274
MspR9I	CCNGG	5 cut(s)	40, 87, 396, 1676, 1908
MunI	CAATTG	1 cut(s)	990
Mva1269I	GAATGC	2 cut(s)	60, 1231
MvaI	CCWGG	4 cut(s)	40, 396, 1676, 1908
MwoI	GCNNNNNNNGC	7 cut(s)	720, 732, 820, 1284, 1680, 1762, 2723
NciI	CCSGG	1 cut(s)	87
NcoI	CCATGG	1 cut(s)	2468
NlaIV	GGNNCC	8 cut(s)	115, 217, 1590, 1629, 1784, 1932, 2208, 2230
NmeAIII	GCCGAG	1 cut(s)	1684
NmuCI	GTSAC	1 cut(s)	1451
PagI	TCATGA	1 cut(s)	2401
PciSI	GCTCTTC	1 cut(s)	1959
PctI	GAATGC	2 cut(s)	60, 1231
PflMI	CCANNNNNTGG	1 cut(s)	251
PinAI	ACCGGT	1 cut(s)	2273
PkrI	GCNGC	5 cut(s)	725, 1013, 1277, 1432, 1998
PleI	GAGTC	4 cut(s)	457, 919, 1919, 2468
PpsI	GAGTC	4 cut(s)	457, 919, 1919, 2468
PshAI	GACNNNNGTC	2 cut(s)	201, 1929
PshBI	ATTAAT	1 cut(s)	1530
PsiI	TTATAA	1 cut(s)	929
Psp6I	CCWGG	4 cut(s)	38, 394, 1674, 1906
PspFI	CCCAGC	1 cut(s)	1584
PspGI	CCWGG	4 cut(s)	38, 394, 1674, 1906
PspN4I	GGNNCC	8 cut(s)	115, 217, 1590, 1629, 1784, 1932, 2208, 2230
PspOMI	GGGCCC	1 cut(s)	2228
PspPI	GGNCC	7 cut(s)	88, 172, 216, 1782, 1931, 2228, 2229
PstI	CTGCAG	1 cut(s)	171
PsuI	RGATCY	4 cut(s)	1138, 1501, 1627, 1864
RseI	CAYNNNNRTG	3 cut(s)	1150, 1398, 1824
SalI	GTCGAC	1 cut(s)	2690
SapI	GCTCTTC	1 cut(s)	1959
SatI	GCNGC	5 cut(s)	724, 1012, 1276, 1431, 1997
Sau96I	GGNCC	7 cut(s)	88, 172, 216, 1782, 1931, 2228, 2229
ScaI	AGTACT	1 cut(s)	1379
SchI	GAGTC	4 cut(s)	458, 920, 1920, 2469
ScrFI	CCNGG	5 cut(s)	40, 87, 396, 1676, 1908
SduI	GDGCHC	3 cut(s)	1258, 2107, 2232
SfaNI	GCATC	6 cut(s)	301, 530, 1752, 2005, 2209, 2507
SfcI	CTRYAG	2 cut(s)	167, 2562
SinI	GGWCC	3 cut(s)	172, 216, 1931
SmiMI	CAYNNNNRTG	3 cut(s)	1150, 1398, 1824
SmlI	CTYRAG	5 cut(s)	1766, 2444, 2540, 2660, 2730
SmoI	CTYRAG	5 cut(s)	1766, 2444, 2540, 2660, 2730
SsiI	CCGC	4 cut(s)	724, 1278, 2018, 2687
SspI	AATATT	2 cut(s)	901, 2026
SspMI	CTAG	5 cut(s)	1358, 1437, 1869, 2054, 2646
StyD4I	CCNGG	5 cut(s)	38, 85, 394, 1674, 1906
StyI	CCWWGG	2 cut(s)	2468, 2488
TaaI	ACNGT	8 cut(s)	237, 740, 980, 1082, 1354, 1382, 2154, 2369
TaqI	TCGA	4 cut(s)	891, 1006, 2463, 2691
TatI	WGTACW	8 cut(s)	1122, 1354, 1377, 1382, 1558, 1857, 2479, 2549
TauI	GCSGC	1 cut(s)	726
TscAI	CASTG	3 cut(s)	432, 599, 983
TseFI	GTSAC	1 cut(s)	1451
TseI	GCWGC	4 cut(s)	1011, 1275, 1430, 1996
Tsp45I	GTSAC	1 cut(s)	1451
TspGWI	ACGGA	6 cut(s)	394, 647, 1742, 1975, 2270, 2591
TspRI	CASTG	3 cut(s)	432, 599, 983
Van91I	CCANNNNNTGG	1 cut(s)	251
Vha464I	CTTAAG	2 cut(s)	1766, 2444
VpaK11BI	GGWCC	3 cut(s)	172, 216, 1931
VspI	ATTAAT	1 cut(s)	1530
XagI	CCTNNNNNAGG	1 cut(s)	2492
XapI	RAATTY	7 cut(s)	128, 502, 1747, 1829, 2137, 2351, 2453
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1599, 1672
XmiI	GTMKAC	2 cut(s)	2565, 2691
XspI	CTAG	5 cut(s)	1358, 1437, 1869, 2054, 2646
ZrmI	AGTACT	1 cut(s)	1379

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.