SDA1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G13160 AT4G31520 AT4G31520 |
| fragaria_vesca | FvH4_4g25230 FvH4_4g25230 FvH4_4g25230 |
| malus_domestica | MD16G1105900.v1.1 |
| prunus_persica | Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1 |
| pyrus_communis | pycom16g09000 |
| rosa_chinensis | RchiOBHm_Chr4g0432421 |
| rosa_laevigata | RLG00000002235 RLG00000003004 RLG00000006844 |
| rosa_multiflora | Rmu_sc0001084.1_g000021 Rmu_sc0004638.1_g000008 |
| rosa_roxburghii | Rroxscaffold_3G00239540 Rroxscaffold_5G00373890 |
| rosa_rugosa | Rorug04G0258500 Rorug04G0258600 Rorug07G0201100 |
| rosa_samantha | Rh4AG314100 Rh4BG321900 Rh4CG337000 Rh4DG317600 Rh7BG357200 Rh7DG347600 |
| rosa_wichuraiana | Rw4G027310 Rw7G029620 Rw7G029960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 990 |
| Acc36I | ACCTGC | 1 cut(s) | 477 |
| AccBSI | CCGCTC | 1 cut(s) | 722 |
| AccII | CGCG | 1 cut(s) | 296 |
| AciI | CCGC | 6 cut(s) | 296, 720, 1154, 2134, 2210, 2379 |
| AclWI | GGATC | 4 cut(s) | 379, 521, 2135, 2281 |
| AcoI | YGGCCR | 2 cut(s) | 46, 1477 |
| AcsI | RAATTY | 2 cut(s) | 995, 2110 |
| AcuI | CTGAAG | 7 cut(s) | 530, 881, 1007, 1516, 1704, 1743, 2039 |
| AfaI | GTAC | 3 cut(s) | 331, 862, 1266 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 726, 1210 |
| AflIII | ACRYGT | 1 cut(s) | 1048 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 796 |
| AjiI | CACGTC | 1 cut(s) | 1280 |
| AjnI | CCWGG | 2 cut(s) | 1483, 1654 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 2389 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1223, 1255, 2088, 2120 |
| Alw21I | GWGCWC | 5 cut(s) | 56, 126, 604, 1960, 2298 |
| Alw26I | GTCTC | 1 cut(s) | 1049 |
| AlwI | GGATC | 4 cut(s) | 379, 521, 2135, 2281 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1648 |
| Ama87I | CYCGRG | 1 cut(s) | 352 |
| AoxI | GGCC | 2 cut(s) | 46, 1477 |
| ApeKI | GCWGC | 8 cut(s) | 179, 928, 1184, 1187, 1409, 1412, 2246, 2318 |
| ApoI | RAATTY | 2 cut(s) | 995, 2110 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 141, 173 |
| AseI | ATTAAT | 1 cut(s) | 825 |
| AspA2I | CCTAGG | 1 cut(s) | 704 |
| AspLEI | GCGC | 2 cut(s) | 622, 991 |
| AsuII | TTCGAA | 3 cut(s) | 230, 361, 2024 |
| AvaI | CYCGRG | 1 cut(s) | 352 |
| AvrII | CCTAGG | 1 cut(s) | 704 |
| AxyI | CCTNAGG | 2 cut(s) | 1284, 1328 |
| BanII | GRGCYC | 2 cut(s) | 56, 126 |
| BbsI | GAAGAC | 7 cut(s) | 62, 1013, 1091, 1489, 1522, 1731, 2270 |
| Bbv12I | GWGCWC | 5 cut(s) | 56, 126, 604, 1960, 2298 |
| BbvI | GCAGC | 8 cut(s) | 191, 940, 1196, 1199, 1421, 1424, 2233, 2305 |
| BccI | CCATC | 8 cut(s) | 1037, 1202, 1409, 1583, 1601, 1694, 1832, 2006 |
| BceAI | ACGGC | 2 cut(s) | 1464, 2234 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 755, 789, 1305, 1339 |
| BciT130I | CCWGG | 2 cut(s) | 1485, 1656 |
| BclI | TGATCA | 2 cut(s) | 1594, 2116 |
| BcoDI | GTCTC | 1 cut(s) | 1049 |
| BfaI | CTAG | 6 cut(s) | 14, 176, 260, 705, 870, 1059 |
| BfmI | CTRYAG | 1 cut(s) | 1860 |
| BfuAI | ACCTGC | 1 cut(s) | 477 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 355 |
| BglII | AGATCT | 2 cut(s) | 636, 1366 |
| BlnI | CCTAGG | 1 cut(s) | 704 |
| BlpI | GCTNAGC | 2 cut(s) | 340, 2123 |
| Bme1390I | CCNGG | 2 cut(s) | 1485, 1656 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 796 |
| BmeT110I | CYCGRG | 1 cut(s) | 352 |
| BmgBI | CACGTC | 1 cut(s) | 1280 |
| BmiI | GGNNCC | 3 cut(s) | 1215, 1233, 2106 |
| BmrFI | CCNGG | 2 cut(s) | 1485, 1656 |
| BmsI | GCATC | 6 cut(s) | 38, 50, 763, 976, 1912, 2382 |
| BpiI | GAAGAC | 7 cut(s) | 62, 1013, 1091, 1489, 1522, 1731, 2270 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1568, 1600 |
| BpmI | CTGGAG | 2 cut(s) | 1506, 2289 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1890 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 340, 2123 |
| Bpu14I | TTCGAA | 3 cut(s) | 230, 361, 2024 |
| BpuEI | CTTGAG | 1 cut(s) | 1946 |
| BsaBI | GATNNNNATC | 4 cut(s) | 518, 557, 1593, 1926 |
| BsaJI | CCNNGG | 4 cut(s) | 238, 351, 704, 2241 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1223, 1253, 1479, 1509 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 726, 1210 |
| Bse118I | RCCGGY | 1 cut(s) | 25 |
| Bse1I | ACTGG | 5 cut(s) | 205, 322, 2199, 2272, 2386 |
| Bse21I | CCTNAGG | 2 cut(s) | 1284, 1328 |
| Bse3DI | GCAATG | 1 cut(s) | 1543 |
| Bse8I | GATNNNNATC | 4 cut(s) | 518, 557, 1593, 1926 |
| BseBI | CCWGG | 2 cut(s) | 1485, 1656 |
| BseDI | CCNNGG | 4 cut(s) | 238, 351, 704, 2241 |
| BseGI | GGATG | 3 cut(s) | 29, 863, 1843 |
| BseJI | GATNNNNATC | 4 cut(s) | 518, 557, 1593, 1926 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 726, 1210 |
| BseMI | GCAATG | 1 cut(s) | 1543 |
| BseMII | CTCAG | 5 cut(s) | 199, 933, 1275, 1319, 1419 |
| BseNI | ACTGG | 5 cut(s) | 205, 322, 2199, 2272, 2386 |
| BseRI | GAGGAG | 2 cut(s) | 184, 809 |
| BseXI | GCAGC | 8 cut(s) | 191, 940, 1196, 1199, 1421, 1424, 2233, 2305 |
| BsgI | GTGCAG | 1 cut(s) | 924 |
| Bsh1236I | CGCG | 1 cut(s) | 296 |
| Bsh1285I | CGRYCG | 1 cut(s) | 247 |
| BshFI | GGCC | 2 cut(s) | 48, 1479 |
| BsiEI | CGRYCG | 1 cut(s) | 247 |
| BsiHKAI | GWGCWC | 5 cut(s) | 56, 126, 604, 1960, 2298 |
| BsiHKCI | CYCGRG | 1 cut(s) | 352 |
| BsiSI | CCGG | 3 cut(s) | 6, 26, 49 |
| BslFI | GGGAC | 1 cut(s) | 1372 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 726, 1210 |
| BsmAI | GTCTC | 1 cut(s) | 1049 |
| BsmFI | GGGAC | 1 cut(s) | 1372 |
| BsnI | GGCC | 2 cut(s) | 48, 1479 |
| BsoBI | CYCGRG | 1 cut(s) | 352 |
| Bsp119I | TTCGAA | 3 cut(s) | 230, 361, 2024 |
| Bsp1286I | GDGCHC | 5 cut(s) | 56, 126, 604, 1960, 2298 |
| Bsp1407I | TGTACA | 1 cut(s) | 1264 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 340, 2123 |
| BspACI | CCGC | 6 cut(s) | 296, 720, 1154, 2134, 2210, 2379 |
| BspANI | GGCC | 2 cut(s) | 48, 1479 |
| BspCNI | CTCAG | 5 cut(s) | 198, 934, 1276, 1320, 1418 |
| BspFNI | CGCG | 1 cut(s) | 296 |
| BspLI | GGNNCC | 3 cut(s) | 1215, 1233, 2106 |
| BspMI | ACCTGC | 1 cut(s) | 477 |
| BspPI | GGATC | 4 cut(s) | 379, 521, 2135, 2281 |
| BspQI | GCTCTTC | 1 cut(s) | 729 |
| BspT104I | TTCGAA | 3 cut(s) | 230, 361, 2024 |
| BsrBI | CCGCTC | 1 cut(s) | 722 |
| BsrDI | GCAATG | 1 cut(s) | 1543 |
| BsrFI | RCCGGY | 1 cut(s) | 25 |
| BsrGI | TGTACA | 1 cut(s) | 1264 |
| BsrI | ACTGG | 5 cut(s) | 205, 322, 2199, 2272, 2386 |
| BssAI | RCCGGY | 1 cut(s) | 25 |
| BssECI | CCNNGG | 4 cut(s) | 238, 351, 704, 2241 |
| BssT1I | CCWWGG | 2 cut(s) | 704, 2241 |
| Bst2UI | CCWGG | 2 cut(s) | 1485, 1656 |
| Bst4CI | ACNGT | 5 cut(s) | 144, 248, 1239, 1495, 1784 |
| Bst6I | CTCTTC | 6 cut(s) | 170, 729, 1347, 1764, 1827, 1895 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2078 |
| BstAUI | TGTACA | 1 cut(s) | 1264 |
| BstBI | TTCGAA | 3 cut(s) | 230, 361, 2024 |
| BstC8I | GCNNGC | 6 cut(s) | 27, 429, 688, 888, 903, 1087 |
| BstF5I | GGATG | 3 cut(s) | 29, 863, 1843 |
| BstFNI | CGCG | 1 cut(s) | 296 |
| BstHHI | GCGC | 2 cut(s) | 622, 991 |
| BstMAI | GTCTC | 1 cut(s) | 1049 |
| BstMCI | CGRYCG | 1 cut(s) | 247 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 305, 355, 599, 1406, 2078 |
| BstNI | CCWGG | 2 cut(s) | 1485, 1656 |
| BstNSI | RCATGY | 1 cut(s) | 1160 |
| BstSCI | CCNGG | 2 cut(s) | 1483, 1654 |
| BstSFI | CTRYAG | 1 cut(s) | 1860 |
| BstUI | CGCG | 1 cut(s) | 296 |
| BstV1I | GCAGC | 8 cut(s) | 191, 940, 1196, 1199, 1421, 1424, 2233, 2305 |
| BstV2I | GAAGAC | 7 cut(s) | 62, 1013, 1091, 1489, 1522, 1731, 2270 |
| BstX2I | RGATCY | 2 cut(s) | 636, 1366 |
| BstYI | RGATCY | 2 cut(s) | 636, 1366 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1284, 1328 |
| BsuRI | GGCC | 2 cut(s) | 48, 1479 |
| BtgZI | GCGATG | 2 cut(s) | 798, 1644 |
| BtrI | CACGTC | 1 cut(s) | 1280 |
| BtsCI | GGATG | 3 cut(s) | 29, 863, 1843 |
| BtsI | GCAGTG | 2 cut(s) | 912, 1045 |
| BtsIMutI | CAGTG | 6 cut(s) | 198, 912, 1045, 1235, 1719, 1789 |
| BveI | ACCTGC | 1 cut(s) | 477 |
| Cac8I | GCNNGC | 6 cut(s) | 27, 429, 688, 888, 903, 1087 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1648 |
| CfoI | GCGC | 2 cut(s) | 622, 991 |
| Cfr10I | RCCGGY | 1 cut(s) | 25 |
| CsiI | ACCWGGT | 1 cut(s) | 1654 |
| Csp6I | GTAC | 3 cut(s) | 330, 861, 1265 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1021, 1056 |
| CviAII | CATG | 4 cut(s) | 170, 253, 1157, 1391 |
| CviQI | GTAC | 3 cut(s) | 330, 861, 1265 |
| DraI | TTTAAA | 1 cut(s) | 981 |
| DriI | GACNNNNNGTC | 1 cut(s) | 796 |
| EaeI | YGGCCR | 2 cut(s) | 46, 1477 |
| Eam1104I | CTCTTC | 6 cut(s) | 170, 729, 1347, 1764, 1827, 1895 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 796 |
| EarI | CTCTTC | 6 cut(s) | 170, 729, 1347, 1764, 1827, 1895 |
| Ecl136II | GAGCTC | 2 cut(s) | 54, 124 |
| Eco130I | CCWWGG | 2 cut(s) | 704, 2241 |
| Eco24I | GRGCYC | 2 cut(s) | 56, 126 |
| Eco53kI | GAGCTC | 2 cut(s) | 54, 124 |
| Eco57I | CTGAAG | 7 cut(s) | 530, 881, 1007, 1516, 1704, 1743, 2039 |
| Eco81I | CCTNAGG | 2 cut(s) | 1284, 1328 |
| Eco88I | CYCGRG | 1 cut(s) | 352 |
| EcoICRI | GAGCTC | 2 cut(s) | 54, 124 |
| EcoRI | GAATTC | 1 cut(s) | 2110 |
| EcoRII | CCWGG | 2 cut(s) | 1483, 1654 |
| EcoT14I | CCWWGG | 2 cut(s) | 704, 2241 |
| EcoT38I | GRGCYC | 2 cut(s) | 56, 126 |
| ErhI | CCWWGG | 2 cut(s) | 704, 2241 |
| FaeI | CATG | 4 cut(s) | 173, 256, 1160, 1394 |
| FalI | AAGNNNNNCTT | 3 cut(s) | 879, 911, 2389 |
| FaqI | GGGAC | 1 cut(s) | 1372 |
| FatI | CATG | 4 cut(s) | 169, 252, 1156, 1390 |
| FauI | CCCGC | 2 cut(s) | 2127, 2203 |
| FbaI | TGATCA | 2 cut(s) | 1594, 2116 |
| FokI | GGATG | 3 cut(s) | 16, 850, 1850 |
| FriOI | GRGCYC | 2 cut(s) | 56, 126 |
| FspBI | CTAG | 6 cut(s) | 14, 176, 260, 705, 870, 1059 |
| FspI | TGCGCA | 1 cut(s) | 990 |
| GlaI | GCGC | 2 cut(s) | 621, 990 |
| GsuI | CTGGAG | 2 cut(s) | 1506, 2289 |
| HaeIII | GGCC | 2 cut(s) | 48, 1479 |
| HapII | CCGG | 3 cut(s) | 6, 26, 49 |
| HhaI | GCGC | 2 cut(s) | 622, 991 |
| Hin1II | CATG | 4 cut(s) | 173, 256, 1160, 1394 |
| Hin6I | GCGC | 2 cut(s) | 620, 989 |
| HinP1I | GCGC | 2 cut(s) | 620, 989 |
| HindIII | AAGCTT | 2 cut(s) | 1845, 2403 |
| HpaII | CCGG | 3 cut(s) | 6, 26, 49 |
| Hpy166II | GTNNAC | 5 cut(s) | 323, 841, 1046, 1267, 1336 |
| Hpy188III | TCNNGA | 6 cut(s) | 440, 737, 1283, 1337, 1598, 1963 |
| Hpy8I | GTNNAC | 5 cut(s) | 323, 841, 1046, 1267, 1336 |
| Hpy99I | CGWCG | 2 cut(s) | 161, 940 |
| HpyCH4III | ACNGT | 5 cut(s) | 144, 248, 1239, 1495, 1784 |
| HpyCH4IV | ACGT | 5 cut(s) | 97, 267, 1048, 1279, 1417 |
| HpyCH4V | TGCA | 9 cut(s) | 374, 668, 905, 1111, 1184, 1363, 1561, 2081, 2321 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 305, 355, 599, 1406, 2078 |
| HpySE526I | ACGT | 5 cut(s) | 97, 267, 1048, 1279, 1417 |
| Hsp92II | CATG | 4 cut(s) | 173, 256, 1160, 1394 |
| HspAI | GCGC | 2 cut(s) | 620, 989 |
| KroI | GCCGGC | 1 cut(s) | 25 |
| KroNI | GCCGGC | 1 cut(s) | 27 |
| Ksp22I | TGATCA | 2 cut(s) | 1594, 2116 |
| LguI | GCTCTTC | 1 cut(s) | 729 |
| LmnI | GCTCC | 8 cut(s) | 51, 59, 129, 571, 1231, 1487, 1645, 2293 |
| Lsp1109I | GCAGC | 8 cut(s) | 191, 940, 1196, 1199, 1421, 1424, 2233, 2305 |
| LweI | GCATC | 6 cut(s) | 38, 50, 763, 976, 1912, 2382 |
| MabI | ACCWGGT | 1 cut(s) | 1654 |
| MaeI | CTAG | 6 cut(s) | 14, 176, 260, 705, 870, 1059 |
| MaeII | ACGT | 5 cut(s) | 97, 267, 1048, 1279, 1417 |
| MaeIII | GTNAC | 7 cut(s) | 98, 110, 268, 458, 488, 1275, 1356 |
| MbiI | CCGCTC | 1 cut(s) | 722 |
| MfeI | CAATTG | 3 cut(s) | 128, 669, 1092 |
| MflI | RGATCY | 2 cut(s) | 636, 1366 |
| MhlI | GDGCHC | 5 cut(s) | 56, 126, 604, 1960, 2298 |
| MlyI | GAGTC | 5 cut(s) | 415, 445, 806, 1296, 1529 |
| MmeI | TCCRAC | 2 cut(s) | 549, 1279 |
| MroNI | GCCGGC | 1 cut(s) | 25 |
| MslI | CAYNNNNRTG | 1 cut(s) | 981 |
| MspA1I | CMGCKG | 1 cut(s) | 2379 |
| MspI | CCGG | 3 cut(s) | 6, 26, 49 |
| MspR9I | CCNGG | 2 cut(s) | 1485, 1656 |
| MunI | CAATTG | 3 cut(s) | 128, 669, 1092 |
| MvaI | CCWGG | 2 cut(s) | 1485, 1656 |
| MvnI | CGCG | 1 cut(s) | 296 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 305, 355, 599, 1406, 2078 |
| NaeI | GCCGGC | 1 cut(s) | 27 |
| NgoMIV | GCCGGC | 1 cut(s) | 25 |
| NlaIII | CATG | 4 cut(s) | 173, 256, 1160, 1394 |
| NlaIV | GGNNCC | 3 cut(s) | 1215, 1233, 2106 |
| NmeAIII | GCCGAG | 1 cut(s) | 219 |
| NmuCI | GTSAC | 4 cut(s) | 98, 458, 488, 1275 |
| NsbI | TGCGCA | 1 cut(s) | 990 |
| NspI | RCATGY | 1 cut(s) | 1160 |
| NspV | TTCGAA | 3 cut(s) | 230, 361, 2024 |
| PciSI | GCTCTTC | 1 cut(s) | 729 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 762, 1608 |
| PdiI | GCCGGC | 1 cut(s) | 27 |
| PfeI | GAWTC | 8 cut(s) | 397, 1255, 1691, 1802, 1853, 1927, 1968, 2097 |
| PfoI | TCCNGGA | 1 cut(s) | 1483 |
| PleI | GAGTC | 5 cut(s) | 414, 445, 805, 1296, 1528 |
| PpsI | GAGTC | 5 cut(s) | 414, 445, 805, 1296, 1528 |
| PshBI | ATTAAT | 1 cut(s) | 825 |
| Psp124BI | GAGCTC | 2 cut(s) | 56, 126 |
| Psp6I | CCWGG | 2 cut(s) | 1483, 1654 |
| PspGI | CCWGG | 2 cut(s) | 1483, 1654 |
| PspN4I | GGNNCC | 3 cut(s) | 1215, 1233, 2106 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1648 |
| PsuI | RGATCY | 2 cut(s) | 636, 1366 |
| RsaI | GTAC | 3 cut(s) | 331, 862, 1266 |
| RsaNI | GTAC | 3 cut(s) | 330, 861, 1265 |
| RseI | CAYNNNNRTG | 1 cut(s) | 981 |
| SacI | GAGCTC | 2 cut(s) | 56, 126 |
| SapI | GCTCTTC | 1 cut(s) | 729 |
| SchI | GAGTC | 5 cut(s) | 415, 445, 806, 1296, 1529 |
| ScrFI | CCNGG | 2 cut(s) | 1485, 1656 |
| SduI | GDGCHC | 5 cut(s) | 56, 126, 604, 1960, 2298 |
| SexAI | ACCWGGT | 1 cut(s) | 1654 |
| SfaNI | GCATC | 6 cut(s) | 38, 50, 763, 976, 1912, 2382 |
| SfcI | CTRYAG | 1 cut(s) | 1860 |
| SfuI | TTCGAA | 3 cut(s) | 230, 361, 2024 |
| SmiI | ATTTAAAT | 1 cut(s) | 981 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 981 |
| SmlI | CTYRAG | 1 cut(s) | 1961 |
| SmoI | CTYRAG | 1 cut(s) | 1961 |
| SsiI | CCGC | 6 cut(s) | 296, 720, 1154, 2134, 2210, 2379 |
| SspMI | CTAG | 6 cut(s) | 14, 176, 260, 705, 870, 1059 |
| SstI | GAGCTC | 2 cut(s) | 56, 126 |
| StyD4I | CCNGG | 2 cut(s) | 1483, 1654 |
| StyI | CCWWGG | 2 cut(s) | 704, 2241 |
| SwaI | ATTTAAAT | 1 cut(s) | 981 |
| TaaI | ACNGT | 5 cut(s) | 144, 248, 1239, 1495, 1784 |
| TaiI | ACGT | 5 cut(s) | 100, 270, 1051, 1282, 1420 |
| TatI | WGTACW | 1 cut(s) | 1264 |
| TauI | GCSGC | 2 cut(s) | 299, 1156 |
| TfiI | GAWTC | 8 cut(s) | 397, 1255, 1691, 1802, 1853, 1927, 1968, 2097 |
| TscAI | CASTG | 6 cut(s) | 205, 912, 1045, 1242, 1726, 1789 |
| TseFI | GTSAC | 4 cut(s) | 98, 458, 488, 1275 |
| TseI | GCWGC | 8 cut(s) | 179, 928, 1184, 1187, 1409, 1412, 2246, 2318 |
| Tsp45I | GTSAC | 4 cut(s) | 98, 458, 488, 1275 |
| TspGWI | ACGGA | 2 cut(s) | 145, 317 |
| TspRI | CASTG | 6 cut(s) | 205, 912, 1045, 1242, 1726, 1789 |
| VspI | ATTAAT | 1 cut(s) | 825 |
| XapI | RAATTY | 2 cut(s) | 995, 2110 |
| XceI | RCATGY | 1 cut(s) | 1160 |
| XmaJI | CCTAGG | 1 cut(s) | 704 |
| XspI | CTAG | 6 cut(s) | 14, 176, 260, 705, 870, 1059 |