Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0004693

Physical Location & Seq

Genomic Coordinates Reverse (-)

54049655 .. 54054676

Gene Structure 5022 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG317600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

ATGAGTTCCCACTACATGACGCCGGAGCCACTCTCGGCCTCGGGTCGGAGCTCCGAGAAGATGAGCCTGCCGACACTTCAATCCAAGATGAAGTGCGACCCGGAAGGCTACGAGACGGAGCTCCTCCTTGTGTACAACCAATTCAAGTCGTCGCTGGAGCTCTTCAAGCAACAAGCCGATCTCGGATTCAAGTCCGTCACCGGCAGCGGCGGCAGCGACCCCACCGTAGCCAAGGACCTCGCCGACCGGGCATTGTTTCTCGCCCACGTCACCCCCTTTTACCCGGCCCAATTGGCCCAATTCCCCTCACAGCTCTCCGAGTTTCTCCACTCCTCCGCCCGAACTCTTCCCTCTGGTCTCAGATTGCATGTTGCTCAAGCTCTCATTCTTCTTATGAACAGAAAGATGGTGGATATTGCAGACAATCTAGGTTTGTTCATGGAGATACAGACTTATGGCGATAAGGCTTTAAAGACCCTGGCATACAATCATGTCATACATAGCATAAAGCGAATGAATATGAAGCATAAGAACGAAGCTAAGAATCGGGTGCTTCAGAATGTCTTGTTTCGGATGCTACAGCTAGAGGATGAAACAAAAGCAAAGAGAGCACTTATCACTCTGCGTGAGCTTCACCGGAGAAAGGTGTGGTTTGATGAAAATACAGCGAATGCAATCTGCTCTGCGTGTTTTCATCCATCGTCGAGGATAATGATTGCTTGTCTCTCATTTCTGCTTGATTACGAGAAGATTGAGGAGGAGGATGATAGTGATGCGTCAAGTAGTGATGAGGACACTCCTATTAAATCTCATCTAGCCATTAATAGAGAGGATATATATAAGGCGCACCATAAGGGTACACTTGCTAGCAAGAAGAAAAAGAAAGCAAAACTGCAGCGTGCCATCCGTAGCCTGAAAAAACAGCAACGCATAACATCAGAAAAAAGTACTTCAAATTATCATACGCCACTTAATCATTTGAGAGATCCACAGGAATTCGCTGAGAAGCTATTCTCCCGTCTTCAAAATAGTACAAGAGTTGAACGCTTTGAGGTCAAAATGATGATGTTGAAAGTAGTTGCTCGAACTATTGGGCTTCATCGCTTGGTTCTGTTGAACTTTTATCCTTATTTTATCAACTACATTACACCTCATCAAAATGGTGTCACTGAATTACTCGCTGCAGCAGTCCAGGCCTGCCATGATATGGTTCCTCCTGATGCAGTTGAACCACTTTTCAAACAAATAGTGAACAAATTTATAGATGATCGTGCACAGCCAGAGGCCATAGCTGTTGGACTGAATACAACGAGGGAAATTTGTTTACGAATGCCTTTGTTGATGACAGAAGATTTGCTGCAAGATCTTGCATTATATAAGAAATCACATACAAAAGCAGTGTCGGTAGCAGCCCGTTCACTTATTGGCTTATTCAGAGAGCTTAACCCCTCGCTGCTGATTAAGAAGGATCGTGGTCGCCAACATGTTGACTCAAAGGCAAGGCCAAAAGCGTATGGAGAAGCCGATGTACTTAGCAATGTACCTGGTCTTGATTTACTAAAACATGATGATGACAATGGGGAGAGTGATGATGATGATGATGATGATGAACCTTCAGTAAGGGGCACTGACGAGATGGTAGCTTCCAGTGATGATGAAGGCTTGCAAATAACCAACACTGATAGTGGAAGTGAAGATGACAACATGATATCTGAAGATGGTGATGAGATAGATGAGAATGACAGTGATGTGAGTGGTGATGAGGATGAGGTGGAAGCGGAGGATGAAGATGAGGATGAGGAAGAGAATACAGAGGATGAGGAGGAAGAATTTGACAATAATGATGCCAAAGATGGTGGATCTGGAGTAAAAGAAAACATAGCAAAAAAGAGGAAATTTGCTGATTTTGATACACAACTTAATGACGCTGAAGCAAGTCTTAGGACTTTGAAGAGATTAGCCAAAGAAAATATGGGTCCTGCTCCATCAGACTCGACAGATGGTTTTCTTTCTAATGAGGACTTCCGGAGGATTAAGGAATTAAAGGCAAAGCAGCGATTGGCTCAGCAGGGGTTGTTGAAAAAGAGCTCAGATGCGAAGTCAACAGCATTCAAGATTCCCACTTCTGATGAATTAAGCATTAAGCGAATAGATCCTGCTAAGCTTGAAGTCCATGTAAAAAGAAGAATGACCAAGGAGGAGAAGCTGGCATTAGTGAAAGCAGGGAGGGAGGATAGAGGGAAGTACATGGCTAGAGCTGCTGTGAAACAGAAGAAGTTGGGAGGCCTGAGCAATAAGCAGAAGGAACATAAGAAGGCTATGCCACTTGTTGCAAAGAGGGCAAAGGTAGCTAAATCTCGAGTGGAAAAACGCAAAAAGCAGCAGCTTTCTGGCAAAAATTTCCGAGGGAAGAAAGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC130_3NT SDA1

Protein Analysis

808

Amino Acids

91.2

Weight (kDa)

6.66

Isoelectric Point (pI)

48.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SDA1_HEAT	PF08158	86 - 462	8.9e-129	SDA1, HEAT repeat
SDA1_C	PF21638	761 - 806	1.8e-07	SDA1, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13160 AT4G31520 AT4G31520
fragaria_vesca	FvH4_4g25230 FvH4_4g25230 FvH4_4g25230
malus_domestica	MD16G1105900.v1.1
prunus_persica	Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1
pyrus_communis	pycom16g09000
rosa_chinensis	RchiOBHm_Chr4g0432421
rosa_laevigata	RLG00000002235 RLG00000003004 RLG00000006844
rosa_multiflora	Rmu_sc0001084.1_g000021 Rmu_sc0004638.1_g000008
rosa_roxburghii	Rroxscaffold_3G00239540 Rroxscaffold_5G00373890
rosa_rugosa	Rorug04G0258500 Rorug04G0258600 Rorug07G0201100
rosa_samantha	Rh4AG314100 Rh4BG321900 Rh4CG337000 Rh4DG317600 Rh7BG357200 Rh7DG347600
rosa_wichuraiana	Rw4G027310 Rw7G029620 Rw7G029960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1207
AccIII	TCCGGA	1 cut(s)	2025
AciI	CCGC	4 cut(s)	207, 210, 336, 1778
AclWI	GGATC	4 cut(s)	980, 1476, 1867, 2147
AcsI	RAATTY	6 cut(s)	995, 1256, 1317, 1829, 1895, 2398
AcuI	CTGAAG	4 cut(s)	539, 1599, 1734, 1950
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	7 cut(s)	134, 859, 949, 1033, 1530, 1542, 2246
AfiI	CCNNNNNNNGG	3 cut(s)	45, 643, 1207
AflIII	ACRYGT	1 cut(s)	1483
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	3 cut(s)	477, 1191, 1543
Alw21I	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2090
Alw26I	GTCTC	3 cut(s)	107, 362, 728
Alw44I	GTGCAC	1 cut(s)	1272
AlwI	GGATC	4 cut(s)	980, 1476, 1867, 2147
Ama87I	CYCGRG	2 cut(s)	40, 2358
Aor13HI	TCCGGA	1 cut(s)	2025
AoxI	GGCC	7 cut(s)	36, 285, 294, 1194, 1284, 1502, 2284
ApaLI	GTGCAC	1 cut(s)	1272
ApoI	RAATTY	6 cut(s)	995, 1256, 1317, 1829, 1895, 2398
ArsI	GACNNNNNNTTYG	4 cut(s)	1336, 1368, 1385, 1417
AseI	ATTAAT	1 cut(s)	822
Asp700I	GAANNNNTTC	1 cut(s)	1010
AspLEI	GCGC	1 cut(s)	847
AspS9I	GGNCC	4 cut(s)	235, 286, 295, 1976
AsuC2I	CCSGG	3 cut(s)	101, 248, 284
AsuHPI	GGTGA	5 cut(s)	190, 262, 626, 1733, 1769
AsuNHI	GCTAGC	1 cut(s)	866
AvaI	CYCGRG	2 cut(s)	40, 2358
AvaII	GGWCC	2 cut(s)	235, 1976
BaeGI	GKGCMC	2 cut(s)	1276, 1628
BanII	GRGCYC	4 cut(s)	53, 123, 162, 2090
BarI	GAAGNNNNNNTAC	2 cut(s)	1512, 1544
BbsI	GAAGAC	1 cut(s)	1013
Bbv12I	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2090
BccI	CCATC	8 cut(s)	400, 706, 911, 1630, 1712, 1847, 1993, 1994
BciT130I	CCWGG	3 cut(s)	479, 1193, 1545
BcnI	CCSGG	3 cut(s)	101, 248, 284
BcoDI	GTCTC	3 cut(s)	107, 362, 728
BfaI	CTAG	5 cut(s)	428, 584, 815, 867, 2253
BfmI	CTRYAG	3 cut(s)	578, 893, 1182
BglI	GCCNNNNNGGC	2 cut(s)	248, 293
BglII	AGATCT	1 cut(s)	1363
BlpI	GCTNAGC	2 cut(s)	2064, 2160
BmcAI	AGTACT	1 cut(s)	949
Bme1390I	CCNGG	6 cut(s)	101, 248, 284, 479, 1193, 1545
Bme18I	GGWCC	2 cut(s)	235, 1976
BmeT110I	CYCGRG	2 cut(s)	40, 2358
BmgBI	CACGTC	1 cut(s)	268
BmgT120I	GGNCC	4 cut(s)	235, 286, 295, 1976
BmiI	GGNNCC	3 cut(s)	27, 1212, 1977
BmrFI	CCNGG	6 cut(s)	101, 248, 284, 479, 1193, 1545
BmsI	GCATC	5 cut(s)	564, 763, 1210, 1834, 2083
BmtI	GCTAGC	1 cut(s)	870
BpiI	GAAGAC	1 cut(s)	1013
BplI	GAGNNNNNCTC	2 cut(s)	17, 49
BpmI	CTGGAG	2 cut(s)	176, 1884
Bpu10I	CCTNAGC	1 cut(s)	2288
Bpu1102I	GCTNAGC	2 cut(s)	2064, 2160
BpuEI	CTTGAG	1 cut(s)	360
BpuMI	CCSGG	3 cut(s)	101, 248, 284
BsaHI	GRCGYC	1 cut(s)	20
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	5 cut(s)	39, 231, 477, 2193, 2404
BsaWI	WCCGGW	2 cut(s)	636, 2025
Bsc4I	CCNNNNNNNGG	3 cut(s)	45, 643, 1207
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	1 cut(s)	1647
Bse3DI	GCAATG	1 cut(s)	1543
BseAI	TCCGGA	1 cut(s)	2025
BseBI	CCWGG	3 cut(s)	479, 1193, 1545
BseDI	CCNNGG	5 cut(s)	39, 231, 477, 2193, 2404
BseGI	GGATG	9 cut(s)	579, 595, 694, 769, 903, 1771, 1789, 1801, 1822
BseLI	CCNNNNNNNGG	3 cut(s)	45, 643, 1207
BseMI	GCAATG	1 cut(s)	1543
BseMII	CTCAG	5 cut(s)	373, 993, 2078, 2103, 2279
BseNI	ACTGG	1 cut(s)	1647
BseRI	GAGGAG	6 cut(s)	113, 322, 770, 773, 1835, 2213
BseSI	GKGCMC	2 cut(s)	1276, 1628
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2286
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2090
BsiHKCI	CYCGRG	2 cut(s)	40, 2358
BsiSI	CCGG	7 cut(s)	23, 101, 201, 247, 284, 637, 2026
BslI	CCNNNNNNNGG	3 cut(s)	45, 643, 1207
BsmAI	GTCTC	3 cut(s)	107, 362, 728
BsmBI	CGTCTC	1 cut(s)	107
BsmI	GAATGC	3 cut(s)	676, 1335, 2108
BsnI	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2286
Bso31I	GGTCTC	1 cut(s)	362
BsoBI	CYCGRG	2 cut(s)	40, 2358
Bsp1286I	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1628, 2090
Bsp13I	TCCGGA	1 cut(s)	2025
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1859, 2152
Bsp1720I	GCTNAGC	2 cut(s)	2064, 2160
BspACI	CCGC	4 cut(s)	207, 210, 336, 1778
BspANI	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2286
BspCNI	CTCAG	5 cut(s)	372, 994, 2077, 2102, 2280
BspEI	TCCGGA	1 cut(s)	2025
BspLI	GGNNCC	3 cut(s)	27, 1212, 1977
BspMAI	CTGCAG	2 cut(s)	897, 1186
BspOI	GCTAGC	1 cut(s)	870
BspPI	GGATC	4 cut(s)	980, 1476, 1867, 2147
BspQI	GCTCTTC	1 cut(s)	167
BspTNI	GGTCTC	1 cut(s)	362
BsrDI	GCAATG	1 cut(s)	1543
BsrFI	RCCGGY	1 cut(s)	200
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	1 cut(s)	1647
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	5 cut(s)	39, 231, 477, 2193, 2404
BssMI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1859, 2152
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	231, 2193
Bst2UI	CCWGG	3 cut(s)	479, 1193, 1545
Bst4CI	ACNGT	2 cut(s)	226, 1745
Bst6I	CTCTTC	4 cut(s)	167, 351, 1797, 1946
BstACI	GRCGYC	1 cut(s)	20
BstAUI	TGTACA	1 cut(s)	132
BstC8I	GCNNGC	6 cut(s)	68, 868, 900, 1198, 1664, 2208
BstDEI	CTNAG	9 cut(s)	359, 540, 1002, 1532, 1940, 2064, 2089, 2160, 2288
BstF5I	GGATG	9 cut(s)	579, 595, 694, 769, 903, 1771, 1789, 1801, 1822
BstHHI	GCGC	1 cut(s)	847
BstKTI	GATC	7 cut(s)	181, 988, 1270, 1366, 1471, 1862, 2155
BstMAI	GTCTC	3 cut(s)	107, 362, 728
BstMBI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1859, 2152
BstMCI	CGRYCG	1 cut(s)	247
BstNI	CCWGG	3 cut(s)	479, 1193, 1545
BstNSI	RCATGY	2 cut(s)	371, 1487
BstSCI	CCNGG	6 cut(s)	99, 246, 282, 477, 1191, 1543
BstSFI	CTRYAG	3 cut(s)	578, 893, 1182
BstSLI	GKGCMC	2 cut(s)	1276, 1628
BstV2I	GAAGAC	1 cut(s)	1013
BstX2I	RGATCY	4 cut(s)	985, 1363, 1859, 2152
BstYI	RGATCY	4 cut(s)	985, 1363, 1859, 2152
BsuRI	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2286
BtgZI	GCGATG	1 cut(s)	1085
BtrI	CACGTC	1 cut(s)	268
BtsCI	GGATG	9 cut(s)	579, 595, 694, 769, 903, 1771, 1789, 1801, 1822
BtsI	GCAGTG	1 cut(s)	1404
BtsIMutI	CAGTG	6 cut(s)	1167, 1404, 1626, 1654, 1677, 1750
Cac8I	GCNNGC	6 cut(s)	68, 868, 900, 1198, 1664, 2208
CfoI	GCGC	1 cut(s)	847
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	4 cut(s)	235, 286, 295, 1976
CseI	GACGC	3 cut(s)	28, 765, 1934
CsiI	ACCWGGT	1 cut(s)	1543
Csp6I	GTAC	7 cut(s)	133, 858, 948, 1032, 1529, 1541, 2245
CspCI	CAANNNNNGTGG	2 cut(s)	1837, 1872
CviQI	GTAC	7 cut(s)	133, 858, 948, 1032, 1529, 1541, 2245
DdeI	CTNAG	9 cut(s)	359, 540, 1002, 1532, 1940, 2064, 2089, 2160, 2288
DpnI	GATC	7 cut(s)	180, 987, 1269, 1365, 1470, 1861, 2154
DpnII	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1859, 2152
DraI	TTTAAA	1 cut(s)	471
Eam1104I	CTCTTC	4 cut(s)	167, 351, 1797, 1946
EarI	CTCTTC	4 cut(s)	167, 351, 1797, 1946
EciI	GGCGGA	1 cut(s)	325
Ecl136II	GAGCTC	4 cut(s)	51, 121, 160, 2088
Eco130I	CCWWGG	2 cut(s)	231, 2193
Eco147I	AGGCCT	2 cut(s)	1196, 2286
Eco24I	GRGCYC	4 cut(s)	53, 123, 162, 2090
Eco31I	GGTCTC	1 cut(s)	362
Eco32I	GATATC	1 cut(s)	1710
Eco47I	GGWCC	2 cut(s)	235, 1976
Eco53kI	GAGCTC	4 cut(s)	51, 121, 160, 2088
Eco57I	CTGAAG	4 cut(s)	539, 1599, 1734, 1950
Eco88I	CYCGRG	2 cut(s)	40, 2358
EcoICRI	GAGCTC	4 cut(s)	51, 121, 160, 2088
EcoO109I	RGGNCCY	2 cut(s)	235, 1976
EcoRI	GAATTC	1 cut(s)	995
EcoRII	CCWGG	3 cut(s)	477, 1191, 1543
EcoRV	GATATC	1 cut(s)	1710
EcoT14I	CCWWGG	2 cut(s)	231, 2193
EcoT38I	GRGCYC	4 cut(s)	53, 123, 162, 2090
ErhI	CCWWGG	2 cut(s)	231, 2193
Esp3I	CGTCTC	1 cut(s)	107
FalI	AAGNNNNNCTT	2 cut(s)	1923, 1955
FokI	GGATG	9 cut(s)	586, 602, 681, 776, 890, 1778, 1796, 1808, 1829
FriOI	GRGCYC	4 cut(s)	53, 123, 162, 2090
FspBI	CTAG	5 cut(s)	428, 584, 815, 867, 2253
GlaI	GCGC	1 cut(s)	846
GsuI	CTGGAG	2 cut(s)	176, 1884
HaeIII	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2286
HapII	CCGG	7 cut(s)	23, 101, 201, 247, 284, 637, 2026
HgaI	GACGC	3 cut(s)	28, 765, 1934
HhaI	GCGC	1 cut(s)	847
Hin1I	GRCGYC	1 cut(s)	20
Hin6I	GCGC	1 cut(s)	845
HinP1I	GCGC	1 cut(s)	845
HincII	GTYRAC	2 cut(s)	1489, 2103
HindII	GTYRAC	2 cut(s)	1489, 2103
HindIII	AAGCTT	1 cut(s)	2162
HinfI	GANTC	5 cut(s)	186, 544, 1490, 1991, 2116
HpaII	CCGG	7 cut(s)	23, 101, 201, 247, 284, 637, 2026
HphI	GGTGA	5 cut(s)	190, 262, 626, 1733, 1769
Hpy166II	GTNNAC	8 cut(s)	133, 860, 1252, 1274, 1325, 1418, 1489, 2103
Hpy188III	TCNNGA	6 cut(s)	1217, 1550, 1863, 2026, 2113, 2358
Hpy8I	GTNNAC	8 cut(s)	133, 860, 1252, 1274, 1325, 1418, 1489, 2103
Hpy99I	CGWCG	2 cut(s)	154, 706
HpyAV	CCTTC	6 cut(s)	98, 1459, 1623, 1652, 2296, 2308
HpyCH4III	ACNGT	2 cut(s)	226, 1745
HpyCH4IV	ACGT	1 cut(s)	267
HpyF3I	CTNAG	9 cut(s)	359, 540, 1002, 1532, 1940, 2064, 2089, 2160, 2288
HpySE526I	ACGT	1 cut(s)	267
Hsp92I	GRCGYC	1 cut(s)	20
HspAI	GCGC	1 cut(s)	845
Kpn2I	TCCGGA	1 cut(s)	2025
Kzo9I	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1859, 2152
LguI	GCTCTTC	1 cut(s)	167
LmnI	GCTCC	7 cut(s)	25, 48, 56, 118, 126, 157, 1987
LweI	GCATC	5 cut(s)	564, 763, 1210, 1834, 2083
MabI	ACCWGGT	1 cut(s)	1543
MaeI	CTAG	5 cut(s)	428, 584, 815, 867, 2253
MaeII	ACGT	1 cut(s)	267
MaeIII	GTNAC	3 cut(s)	196, 268, 1165
MalI	GATC	7 cut(s)	180, 987, 1269, 1365, 1470, 1861, 2154
MboI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1859, 2152
MfeI	CAATTG	1 cut(s)	290
MflI	RGATCY	4 cut(s)	985, 1363, 1859, 2152
MhlI	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1628, 2090
MlyI	GAGTC	2 cut(s)	1484, 1985
MmeI	TCCRAC	2 cut(s)	26, 1276
MroI	TCCGGA	1 cut(s)	2025
MroXI	GAANNNNTTC	1 cut(s)	1010
MslI	CAYNNNNRTG	3 cut(s)	1158, 1569, 2422
MspA1I	CMGCKG	1 cut(s)	207
MspI	CCGG	7 cut(s)	23, 101, 201, 247, 284, 637, 2026
MspR9I	CCNGG	6 cut(s)	101, 248, 284, 479, 1193, 1545
MunI	CAATTG	1 cut(s)	290
Mva1269I	GAATGC	3 cut(s)	676, 1335, 2108
MvaI	CCWGG	3 cut(s)	479, 1193, 1545
NciI	CCSGG	3 cut(s)	101, 248, 284
NdeII	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1859, 2152
NheI	GCTAGC	1 cut(s)	866
NlaIV	GGNNCC	3 cut(s)	27, 1212, 1977
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	3 cut(s)	196, 268, 1165
NspI	RCATGY	2 cut(s)	371, 1487
PaeR7I	CTCGAG	1 cut(s)	2358
PceI	AGGCCT	2 cut(s)	1196, 2286
PciI	ACATGT	1 cut(s)	1483
PciSI	GCTCTTC	1 cut(s)	167
PctI	GAATGC	3 cut(s)	676, 1335, 2108
PdmI	GAANNNNTTC	1 cut(s)	1010
PfeI	GAWTC	3 cut(s)	186, 544, 2116
PflMI	CCANNNNNTGG	1 cut(s)	1207
PleI	GAGTC	2 cut(s)	1484, 1985
PpsI	GAGTC	2 cut(s)	1484, 1985
PpuMI	RGGWCCY	2 cut(s)	235, 1976
PscI	ACATGT	1 cut(s)	1483
PshBI	ATTAAT	1 cut(s)	822
Psp124BI	GAGCTC	4 cut(s)	53, 123, 162, 2090
Psp5II	RGGWCCY	2 cut(s)	235, 1976
Psp6I	CCWGG	3 cut(s)	477, 1191, 1543
PspGI	CCWGG	3 cut(s)	477, 1191, 1543
PspN4I	GGNNCC	3 cut(s)	27, 1212, 1977
PspPI	GGNCC	4 cut(s)	235, 286, 295, 1976
PspPPI	RGGWCCY	2 cut(s)	235, 1976
PstI	CTGCAG	2 cut(s)	897, 1186
PsuI	RGATCY	4 cut(s)	985, 1363, 1859, 2152
RsaI	GTAC	7 cut(s)	134, 859, 949, 1033, 1530, 1542, 2246
RsaNI	GTAC	7 cut(s)	133, 858, 948, 1032, 1529, 1541, 2245
RseI	CAYNNNNRTG	3 cut(s)	1158, 1569, 2422
SacI	GAGCTC	4 cut(s)	53, 123, 162, 2090
SapI	GCTCTTC	1 cut(s)	167
Sau3AI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1859, 2152
Sau96I	GGNCC	4 cut(s)	235, 286, 295, 1976
ScaI	AGTACT	1 cut(s)	949
SchI	GAGTC	2 cut(s)	1484, 1985
ScrFI	CCNGG	6 cut(s)	101, 248, 284, 479, 1193, 1545
SduI	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1628, 2090
SexAI	ACCWGGT	1 cut(s)	1543
SfaNI	GCATC	5 cut(s)	564, 763, 1210, 1834, 2083
SfcI	CTRYAG	3 cut(s)	578, 893, 1182
SfiI	GGCCNNNNNGGCC	1 cut(s)	293
Sfr274I	CTCGAG	1 cut(s)	2358
SinI	GGWCC	2 cut(s)	235, 1976
SlaI	CTCGAG	1 cut(s)	2358
SmiMI	CAYNNNNRTG	3 cut(s)	1158, 1569, 2422
SmlI	CTYRAG	2 cut(s)	375, 2358
SmoI	CTYRAG	2 cut(s)	375, 2358
SseBI	AGGCCT	2 cut(s)	1196, 2286
SsiI	CCGC	4 cut(s)	207, 210, 336, 1778
SspMI	CTAG	5 cut(s)	428, 584, 815, 867, 2253
SstI	GAGCTC	4 cut(s)	53, 123, 162, 2090
StuI	AGGCCT	2 cut(s)	1196, 2286
StyD4I	CCNGG	6 cut(s)	99, 246, 282, 477, 1191, 1543
StyI	CCWWGG	2 cut(s)	231, 2193
TaaI	ACNGT	2 cut(s)	226, 1745
TaiI	ACGT	1 cut(s)	270
TaqI	TCGA	4 cut(s)	704, 1084, 1994, 2359
TatI	WGTACW	5 cut(s)	132, 947, 1031, 1528, 2244
TauI	GCSGC	2 cut(s)	210, 213
TfiI	GAWTC	3 cut(s)	186, 544, 2116
TscAI	CASTG	6 cut(s)	1174, 1404, 1633, 1654, 1684, 1750
TseFI	GTSAC	3 cut(s)	196, 268, 1165
Tsp45I	GTSAC	3 cut(s)	196, 268, 1165
TspGWI	ACGGA	3 cut(s)	131, 184, 896
TspRI	CASTG	6 cut(s)	1174, 1404, 1633, 1654, 1684, 1750
Van91I	CCANNNNNTGG	1 cut(s)	1207
VneI	GTGCAC	1 cut(s)	1272
VpaK11BI	GGWCC	2 cut(s)	235, 1976
VspI	ATTAAT	1 cut(s)	822
XapI	RAATTY	6 cut(s)	995, 1256, 1317, 1829, 1895, 2398
XceI	RCATGY	2 cut(s)	371, 1487
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1969
XhoI	CTCGAG	1 cut(s)	2358
XmnI	GAANNNNTTC	1 cut(s)	1010
XspI	CTAG	5 cut(s)	428, 584, 815, 867, 2253
ZrmI	AGTACT	1 cut(s)	949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.