Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0004693

Physical Location & Seq

Genomic Coordinates Forward (+)

11014017 .. 11018814

Gene Structure 4798 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006844

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGAGTTCCCACTACATGACGCCGGAGCCACTCTCGGCCTCGGGTCGGAGCTCCGAGAAGATGAGCCTGCCGACACTTCAATCCAAGATGAAGTGCGACCCGGAAGGCTACGAGACGGAGCTGCTCCTTGTGTACAACCAATTCAAGTCGTCGCTGGAGCTCTTCAAGCAACAAGCCGATCTCGGATTCAAGTCCGTCACCGGCAGCGGCGGCAGCGACCCCACCGTCGCCAAGGTCCTCGCCGACCGGGCATTGTTTCTGGCCCACGTCACCCCCTTTTACCCGGCCCAATTGTCCCAATTCCCCTCACAGCTCTCCGAGTTTCTCCACTCCTCCGCCCGAACGCTTCCCTCTGGTCTCAGATTGCATGTTGCTCAAGCTCTCATTCTTCTTATGAACAGAAAGGCGCACCATAAGGGTACCCTTGCTAGCAAGAAGAAAAAGAAAGCAAAACTGCAGCGCGCCATCCGTAGCCTGAAAAAACAGCAACGCATAACATCAGAAAAAAGTACTTCAAATTATCATACGCCACTTAATCATTTGAGAGATCCACAGGAATTCGCTGAGAAGCTATTCTCCCGTCTTCAAAATAGTACAAGAGTTGAACGCTTTGAGGTCAAAATGATGATGTTGAAACTAGTTGCTCGAACTATTGGGCTTCATCGCTTGGTTCTGTTGAACTTTTATCCTTATTTTATCAACTACATTACGCCTCAACAAAATGGTGTCACGGAATTACTCGCTGCAGCAGTCCAGGCCTGCCATGATATGGTTCCTCCTGATGCAGTTGAACCACTTTTCAAACAAATAGTTAACAAATTTATAGATGATCGTGCACAGCCAGAGGCCATAGCTGTTGGACTGAATACAACAAGGGAAATTTGTTTACGAATGCCTTTGTTGATGACAGAAGATTTGCTGCAAGATCTTGCATTATATAAGAAATCACATACAAAAGCAGTGTCAGTAGCAGCCCGTTCACTTATTGGCTTATTCAGAGAGCTTAACCCCTCGCTGCTGATTAAGAAGGATCGTGGTCGCCAACATGTTGACTCAAAGGCAAGGACAAAAGCGTATGGAGAAGTCGATGTACTTAGCAATGTTCCTGGTCTTGATTTACTAAAACATGATGATGACAATGGGGAGAGTGATGATGATGATGAACCTTCAGTAAGGGGCACTGATGAGATGGTAGCTTCCAGTGATGATGAAGGCTTGCAAATAACCAACACTGATAGTGGAAGTGAAGATGACAACATGATATCTGAAGATGGTGATGAGATAGATGAGAATGACAGTGATGTGAGTGGTGATGAGGATGAGGTGGAAGCGGAGGATGAAGATGAGGATGAGGAAGAGCATGAGGAGGAAGAATTTGACTATCATGATGCCAAAGATGGTGGATCTGGAGTAGAAGAAAACATAGCAAAAAAGAGGAAATTTGCTGATTTTGATACACAACTTAATGACGCTGAAGCGAGTCTTAGGACTTTGAAGAGATTAGCCAAAGAAAATATGGGTCCTGCTCCATCAGACTCGACAGATGGTTTTCTTTCTAATGAGGACTTCCGGAGGATTAAGGAATTAAAGGCAAAGCAGCGATTGGCTCAGCAGGGGTTGTTGAAAAAGAGCTCAGATGCGAAGTCAACAGCATTCAAGATTCCCACTTCTGATGAATTAAGCATTAAGCGAATTGATCCTGCTAAGCTTGAAGTCCATGTAAAAAGAAGAATGACCAAGGAGGAGAAGCTGGCATTAGTGAAAGCAGGGAGGGAGGAAAGAGGGAAGTACATGGCTAGAGCTGCTGTAAAACAGAAGAAGTCGGGAGGCCTGAGCAATAAGCAGAAGGAACATAAGAAGGCTATGCCACTTGTTGCAAAGAGGGCAAAGGTAGCTAAATCTCGAGTGGCAAAACGCAAAAAGCAGCAGCTTTCTGGCAAAAATTTCCGAGGGAAGAAAGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC130_3NT SDA1

Protein Analysis

657

Amino Acids

73.61

Weight (kDa)

8.49

Isoelectric Point (pI)

49.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SDA1_HEAT	PF08158	86 - 136	1.1e-08	SDA1, HEAT repeat
SDA1_HEAT	PF08158	136 - 316	5e-70	SDA1, HEAT repeat
SDA1_C	PF21638	609 - 654	3.9e-07	SDA1, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13160 AT4G31520 AT4G31520
fragaria_vesca	FvH4_4g25230 FvH4_4g25230 FvH4_4g25230
malus_domestica	MD16G1105900.v1.1
prunus_persica	Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1
pyrus_communis	pycom16g09000
rosa_chinensis	RchiOBHm_Chr4g0432421
rosa_laevigata	RLG00000002235 RLG00000003004 RLG00000006844
rosa_multiflora	Rmu_sc0001084.1_g000021 Rmu_sc0004638.1_g000008
rosa_roxburghii	Rroxscaffold_3G00239540 Rroxscaffold_5G00373890
rosa_rugosa	Rorug04G0258500 Rorug04G0258600 Rorug07G0201100
rosa_samantha	Rh4AG314100 Rh4BG321900 Rh4CG337000 Rh4DG317600 Rh7BG357200 Rh7DG347600
rosa_wichuraiana	Rw4G027310 Rw7G029620 Rw7G029960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	224
Acc65I	GGTACC	1 cut(s)	419
AccB1I	GGYRCC	1 cut(s)	419
AccB7I	CCANNNNNTGG	1 cut(s)	769
AccII	CGCG	1 cut(s)	462
AccIII	TCCGGA	1 cut(s)	1569
AciI	CCGC	4 cut(s)	207, 210, 336, 1331
AclWI	GGATC	4 cut(s)	542, 1038, 1411, 1691
AcsI	RAATTY	6 cut(s)	557, 818, 879, 1373, 1439, 1942
AcuI	CTGAAG	3 cut(s)	1152, 1287, 1494
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	6 cut(s)	134, 421, 511, 595, 1092, 1790
AfiI	CCNNNNNNNGG	2 cut(s)	45, 769
AflIII	ACRYGT	1 cut(s)	1045
AhlI	ACTAGT	1 cut(s)	637
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	2 cut(s)	753, 1105
Alw21I	GWGCWC	4 cut(s)	53, 162, 838, 1634
Alw26I	GTCTC	2 cut(s)	107, 362
Alw44I	GTGCAC	1 cut(s)	834
AlwI	GGATC	4 cut(s)	542, 1038, 1411, 1691
Ama87I	CYCGRG	2 cut(s)	40, 1902
Aor13HI	TCCGGA	1 cut(s)	1569
AoxI	GGCC	6 cut(s)	36, 261, 285, 756, 846, 1828
ApaLI	GTGCAC	1 cut(s)	834
ApoI	RAATTY	6 cut(s)	557, 818, 879, 1373, 1439, 1942
ArsI	GACNNNNNNTTYG	4 cut(s)	898, 930, 947, 979
Asp700I	GAANNNNTTC	1 cut(s)	572
Asp718I	GGTACC	1 cut(s)	419
AspLEI	GCGC	3 cut(s)	409, 462, 464
AspS9I	GGNCC	4 cut(s)	235, 262, 286, 1520
AsuC2I	CCSGG	3 cut(s)	101, 248, 284
AsuHPI	GGTGA	4 cut(s)	190, 262, 1286, 1322
AsuNHI	GCTAGC	1 cut(s)	428
AvaI	CYCGRG	2 cut(s)	40, 1902
AvaII	GGWCC	2 cut(s)	235, 1520
BaeGI	GKGCMC	2 cut(s)	838, 1181
BanI	GGYRCC	1 cut(s)	419
BanII	GRGCYC	3 cut(s)	53, 162, 1634
BarI	GAAGNNNNNNTAC	2 cut(s)	1074, 1106
BbsI	GAAGAC	1 cut(s)	575
Bbv12I	GWGCWC	4 cut(s)	53, 162, 838, 1634
BccI	CCATC	6 cut(s)	473, 1183, 1265, 1391, 1537, 1538
BciT130I	CCWGG	2 cut(s)	755, 1107
BcnI	CCSGG	3 cut(s)	101, 248, 284
BcoDI	GTCTC	2 cut(s)	107, 362
BcuI	ACTAGT	1 cut(s)	637
BfaI	CTAG	3 cut(s)	429, 638, 1797
BfmI	CTRYAG	2 cut(s)	455, 744
BglI	GCCNNNNNGGC	1 cut(s)	248
BglII	AGATCT	1 cut(s)	925
BlpI	GCTNAGC	2 cut(s)	1608, 1704
BmcAI	AGTACT	1 cut(s)	511
Bme1390I	CCNGG	5 cut(s)	101, 248, 284, 755, 1107
Bme18I	GGWCC	2 cut(s)	235, 1520
BmeT110I	CYCGRG	2 cut(s)	40, 1902
BmgBI	CACGTC	1 cut(s)	268
BmgT120I	GGNCC	4 cut(s)	235, 262, 286, 1520
BmiI	GGNNCC	4 cut(s)	27, 421, 774, 1521
BmrFI	CCNGG	5 cut(s)	101, 248, 284, 755, 1107
BmsI	GCATC	3 cut(s)	772, 1378, 1627
BmtI	GCTAGC	1 cut(s)	432
BpiI	GAAGAC	1 cut(s)	575
BplI	GAGNNNNNCTC	2 cut(s)	17, 49
BpmI	CTGGAG	2 cut(s)	176, 1428
Bpu10I	CCTNAGC	1 cut(s)	1832
Bpu1102I	GCTNAGC	2 cut(s)	1608, 1704
BpuEI	CTTGAG	1 cut(s)	360
BpuMI	CCSGG	3 cut(s)	101, 248, 284
BsaHI	GRCGYC	1 cut(s)	20
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	4 cut(s)	39, 231, 1737, 1948
BsaWI	WCCGGW	1 cut(s)	1569
Bsc4I	CCNNNNNNNGG	2 cut(s)	45, 769
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	1 cut(s)	1200
Bse3DI	GCAATG	1 cut(s)	1105
BseAI	TCCGGA	1 cut(s)	1569
BseBI	CCWGG	2 cut(s)	755, 1107
BseDI	CCNNGG	4 cut(s)	39, 231, 1737, 1948
BseGI	GGATG	4 cut(s)	465, 1324, 1342, 1354
BseLI	CCNNNNNNNGG	2 cut(s)	45, 769
BseMI	GCAATG	1 cut(s)	1105
BseMII	CTCAG	5 cut(s)	373, 555, 1622, 1647, 1823
BseNI	ACTGG	1 cut(s)	1200
BsePI	GCGCGC	1 cut(s)	460
BseRI	GAGGAG	3 cut(s)	322, 1379, 1757
BseSI	GKGCMC	2 cut(s)	838, 1181
Bsh1236I	CGCG	1 cut(s)	462
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	6 cut(s)	38, 263, 287, 758, 848, 1830
BshNI	GGYRCC	1 cut(s)	419
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	4 cut(s)	53, 162, 838, 1634
BsiHKCI	CYCGRG	2 cut(s)	40, 1902
BsiSI	CCGG	6 cut(s)	23, 101, 201, 247, 284, 1570
BslFI	GGGAC	1 cut(s)	280
BslI	CCNNNNNNNGG	2 cut(s)	45, 769
BsmAI	GTCTC	2 cut(s)	107, 362
BsmBI	CGTCTC	1 cut(s)	107
BsmFI	GGGAC	1 cut(s)	280
BsmI	GAATGC	2 cut(s)	897, 1652
BsnI	GGCC	6 cut(s)	38, 263, 287, 758, 848, 1830
Bso31I	GGTCTC	1 cut(s)	362
BsoBI	CYCGRG	2 cut(s)	40, 1902
Bsp1286I	GDGCHC	5 cut(s)	53, 162, 838, 1181, 1634
Bsp13I	TCCGGA	1 cut(s)	1569
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1403, 1696
Bsp1720I	GCTNAGC	2 cut(s)	1608, 1704
BspACI	CCGC	4 cut(s)	207, 210, 336, 1331
BspANI	GGCC	6 cut(s)	38, 263, 287, 758, 848, 1830
BspCNI	CTCAG	5 cut(s)	372, 556, 1621, 1646, 1824
BspEI	TCCGGA	1 cut(s)	1569
BspFNI	CGCG	1 cut(s)	462
BspHI	TCATGA	1 cut(s)	1384
BspLI	GGNNCC	4 cut(s)	27, 421, 774, 1521
BspMAI	CTGCAG	2 cut(s)	459, 748
BspOI	GCTAGC	1 cut(s)	432
BspPI	GGATC	4 cut(s)	542, 1038, 1411, 1691
BspQI	GCTCTTC	2 cut(s)	167, 1350
BspT107I	GGYRCC	1 cut(s)	419
BspTNI	GGTCTC	1 cut(s)	362
BsrDI	GCAATG	1 cut(s)	1105
BsrFI	RCCGGY	1 cut(s)	200
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	1 cut(s)	1200
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	4 cut(s)	39, 231, 1737, 1948
BssHII	GCGCGC	1 cut(s)	460
BssMI	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1403, 1696
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	231, 1737
Bst2UI	CCWGG	2 cut(s)	755, 1107
Bst4CI	ACNGT	2 cut(s)	226, 1298
Bst6I	CTCTTC	3 cut(s)	167, 1350, 1490
BstACI	GRCGYC	1 cut(s)	20
BstAUI	TGTACA	1 cut(s)	132
BstC8I	GCNNGC	6 cut(s)	68, 430, 462, 760, 1217, 1752
BstDEI	CTNAG	8 cut(s)	359, 564, 1094, 1484, 1608, 1633, 1704, 1832
BstF5I	GGATG	4 cut(s)	465, 1324, 1342, 1354
BstFNI	CGCG	1 cut(s)	462
BstHHI	GCGC	3 cut(s)	409, 462, 464
BstKTI	GATC	7 cut(s)	181, 550, 832, 928, 1033, 1406, 1699
BstMAI	GTCTC	2 cut(s)	107, 362
BstMBI	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1403, 1696
BstMCI	CGRYCG	1 cut(s)	247
BstMWI	GCNNNNNNNGC	8 cut(s)	166, 210, 213, 248, 755, 1802, 1883, 1892
BstNI	CCWGG	2 cut(s)	755, 1107
BstNSI	RCATGY	2 cut(s)	371, 1049
BstSCI	CCNGG	5 cut(s)	99, 246, 282, 753, 1105
BstSFI	CTRYAG	2 cut(s)	455, 744
BstSLI	GKGCMC	2 cut(s)	838, 1181
BstUI	CGCG	1 cut(s)	462
BstV2I	GAAGAC	1 cut(s)	575
BstX2I	RGATCY	3 cut(s)	547, 925, 1403
BstYI	RGATCY	3 cut(s)	547, 925, 1403
BsuRI	GGCC	6 cut(s)	38, 263, 287, 758, 848, 1830
BtgZI	GCGATG	1 cut(s)	647
BtrI	CACGTC	1 cut(s)	268
BtsCI	GGATG	4 cut(s)	465, 1324, 1342, 1354
BtsI	GCAGTG	1 cut(s)	966
BtsIMutI	CAGTG	5 cut(s)	966, 1179, 1207, 1230, 1303
Cac8I	GCNNGC	6 cut(s)	68, 430, 462, 760, 1217, 1752
CciI	TCATGA	1 cut(s)	1384
CfoI	GCGC	3 cut(s)	409, 462, 464
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	4 cut(s)	235, 262, 286, 1520
CseI	GACGC	2 cut(s)	28, 1478
Csp6I	GTAC	6 cut(s)	133, 420, 510, 594, 1091, 1789
CspCI	CAANNNNNGTGG	2 cut(s)	1381, 1416
CviQI	GTAC	6 cut(s)	133, 420, 510, 594, 1091, 1789
DdeI	CTNAG	8 cut(s)	359, 564, 1094, 1484, 1608, 1633, 1704, 1832
DpnI	GATC	7 cut(s)	180, 549, 831, 927, 1032, 1405, 1698
DpnII	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1403, 1696
DrdI	GACNNNNNNGTC	1 cut(s)	224
DseDI	GACNNNNNNGTC	1 cut(s)	224
Eam1104I	CTCTTC	3 cut(s)	167, 1350, 1490
EarI	CTCTTC	3 cut(s)	167, 1350, 1490
EciI	GGCGGA	1 cut(s)	325
Ecl136II	GAGCTC	3 cut(s)	51, 160, 1632
Eco130I	CCWWGG	2 cut(s)	231, 1737
Eco147I	AGGCCT	2 cut(s)	758, 1830
Eco24I	GRGCYC	3 cut(s)	53, 162, 1634
Eco31I	GGTCTC	1 cut(s)	362
Eco32I	GATATC	1 cut(s)	1263
Eco47I	GGWCC	2 cut(s)	235, 1520
Eco53kI	GAGCTC	3 cut(s)	51, 160, 1632
Eco57I	CTGAAG	3 cut(s)	1152, 1287, 1494
Eco88I	CYCGRG	2 cut(s)	40, 1902
EcoICRI	GAGCTC	3 cut(s)	51, 160, 1632
EcoO109I	RGGNCCY	2 cut(s)	235, 1520
EcoRI	GAATTC	1 cut(s)	557
EcoRII	CCWGG	2 cut(s)	753, 1105
EcoRV	GATATC	1 cut(s)	1263
EcoT14I	CCWWGG	2 cut(s)	231, 1737
EcoT38I	GRGCYC	3 cut(s)	53, 162, 1634
ErhI	CCWWGG	2 cut(s)	231, 1737
Esp3I	CGTCTC	1 cut(s)	107
FalI	AAGNNNNNCTT	2 cut(s)	1467, 1499
FaqI	GGGAC	1 cut(s)	280
FokI	GGATG	4 cut(s)	452, 1331, 1349, 1361
FriOI	GRGCYC	3 cut(s)	53, 162, 1634
FspBI	CTAG	3 cut(s)	429, 638, 1797
GlaI	GCGC	3 cut(s)	408, 461, 463
GsuI	CTGGAG	2 cut(s)	176, 1428
HaeIII	GGCC	6 cut(s)	38, 263, 287, 758, 848, 1830
HapII	CCGG	6 cut(s)	23, 101, 201, 247, 284, 1570
HgaI	GACGC	2 cut(s)	28, 1478
HhaI	GCGC	3 cut(s)	409, 462, 464
Hin1I	GRCGYC	1 cut(s)	20
Hin6I	GCGC	3 cut(s)	407, 460, 462
HinP1I	GCGC	3 cut(s)	407, 460, 462
HincII	GTYRAC	3 cut(s)	814, 1051, 1647
HindII	GTYRAC	3 cut(s)	814, 1051, 1647
HindIII	AAGCTT	1 cut(s)	1706
HinfI	GANTC	5 cut(s)	186, 1052, 1480, 1535, 1660
HpaI	GTTAAC	1 cut(s)	814
HpaII	CCGG	6 cut(s)	23, 101, 201, 247, 284, 1570
HphI	GGTGA	4 cut(s)	190, 262, 1286, 1322
Hpy166II	GTNNAC	7 cut(s)	133, 814, 836, 887, 980, 1051, 1647
Hpy188III	TCNNGA	8 cut(s)	779, 1112, 1385, 1407, 1570, 1657, 1824, 1902
Hpy8I	GTNNAC	7 cut(s)	133, 814, 836, 887, 980, 1051, 1647
Hpy99I	CGWCG	2 cut(s)	154, 230
HpyAV	CCTTC	6 cut(s)	98, 1021, 1176, 1205, 1840, 1852
HpyCH4III	ACNGT	2 cut(s)	226, 1298
HpyCH4IV	ACGT	1 cut(s)	267
HpyCH4V	TGCA	9 cut(s)	367, 457, 746, 785, 836, 922, 932, 1219, 1877
HpyF10VI	GCNNNNNNNGC	8 cut(s)	166, 210, 213, 248, 755, 1802, 1883, 1892
HpyF3I	CTNAG	8 cut(s)	359, 564, 1094, 1484, 1608, 1633, 1704, 1832
HpySE526I	ACGT	1 cut(s)	267
Hsp92I	GRCGYC	1 cut(s)	20
HspAI	GCGC	3 cut(s)	407, 460, 462
Kpn2I	TCCGGA	1 cut(s)	1569
KpnI	GGTACC	1 cut(s)	423
KspAI	GTTAAC	1 cut(s)	814
Kzo9I	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1403, 1696
LguI	GCTCTTC	2 cut(s)	167, 1350
LmnI	GCTCC	7 cut(s)	25, 48, 56, 118, 129, 157, 1531
LweI	GCATC	3 cut(s)	772, 1378, 1627
MaeI	CTAG	3 cut(s)	429, 638, 1797
MaeII	ACGT	1 cut(s)	267
MaeIII	GTNAC	3 cut(s)	196, 268, 727
MalI	GATC	7 cut(s)	180, 549, 831, 927, 1032, 1405, 1698
MboI	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1403, 1696
MfeI	CAATTG	1 cut(s)	290
MflI	RGATCY	3 cut(s)	547, 925, 1403
MhlI	GDGCHC	5 cut(s)	53, 162, 838, 1181, 1634
MlyI	GAGTC	3 cut(s)	1046, 1489, 1529
MmeI	TCCRAC	2 cut(s)	26, 838
MroI	TCCGGA	1 cut(s)	1569
MroXI	GAANNNNTTC	1 cut(s)	572
MseI	TTAA	9 cut(s)	534, 813, 1005, 1023, 1464, 1578, 1586, 1679, 1686
MslI	CAYNNNNRTG	2 cut(s)	1131, 1966
MspA1I	CMGCKG	1 cut(s)	207
MspI	CCGG	6 cut(s)	23, 101, 201, 247, 284, 1570
MspR9I	CCNGG	5 cut(s)	101, 248, 284, 755, 1107
MunI	CAATTG	1 cut(s)	290
Mva1269I	GAATGC	2 cut(s)	897, 1652
MvaI	CCWGG	2 cut(s)	755, 1107
MvnI	CGCG	1 cut(s)	462
MwoI	GCNNNNNNNGC	8 cut(s)	166, 210, 213, 248, 755, 1802, 1883, 1892
NciI	CCSGG	3 cut(s)	101, 248, 284
NdeII	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1403, 1696
NheI	GCTAGC	1 cut(s)	428
NlaIV	GGNNCC	4 cut(s)	27, 421, 774, 1521
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	3 cut(s)	196, 268, 727
NspI	RCATGY	2 cut(s)	371, 1049
PaeR7I	CTCGAG	1 cut(s)	1902
PagI	TCATGA	1 cut(s)	1384
PauI	GCGCGC	1 cut(s)	460
PceI	AGGCCT	2 cut(s)	758, 1830
PciI	ACATGT	1 cut(s)	1045
PciSI	GCTCTTC	2 cut(s)	167, 1350
PctI	GAATGC	2 cut(s)	897, 1652
PdmI	GAANNNNTTC	1 cut(s)	572
PfeI	GAWTC	2 cut(s)	186, 1660
PflMI	CCANNNNNTGG	1 cut(s)	769
PleI	GAGTC	3 cut(s)	1046, 1488, 1529
PpsI	GAGTC	3 cut(s)	1046, 1488, 1529
PpuMI	RGGWCCY	2 cut(s)	235, 1520
PscI	ACATGT	1 cut(s)	1045
Psp124BI	GAGCTC	3 cut(s)	53, 162, 1634
Psp5II	RGGWCCY	2 cut(s)	235, 1520
Psp6I	CCWGG	2 cut(s)	753, 1105
PspGI	CCWGG	2 cut(s)	753, 1105
PspN4I	GGNNCC	4 cut(s)	27, 421, 774, 1521
PspPI	GGNCC	4 cut(s)	235, 262, 286, 1520
PspPPI	RGGWCCY	2 cut(s)	235, 1520
PstI	CTGCAG	2 cut(s)	459, 748
PsuI	RGATCY	3 cut(s)	547, 925, 1403
PteI	GCGCGC	1 cut(s)	460
RsaI	GTAC	6 cut(s)	134, 421, 511, 595, 1092, 1790
RsaNI	GTAC	6 cut(s)	133, 420, 510, 594, 1091, 1789
RseI	CAYNNNNRTG	2 cut(s)	1131, 1966
SacI	GAGCTC	3 cut(s)	53, 162, 1634
SapI	GCTCTTC	2 cut(s)	167, 1350
SaqAI	TTAA	9 cut(s)	534, 813, 1005, 1023, 1464, 1578, 1586, 1679, 1686
Sau3AI	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1403, 1696
Sau96I	GGNCC	4 cut(s)	235, 262, 286, 1520
ScaI	AGTACT	1 cut(s)	511
SchI	GAGTC	3 cut(s)	1046, 1489, 1529
ScrFI	CCNGG	5 cut(s)	101, 248, 284, 755, 1107
SduI	GDGCHC	5 cut(s)	53, 162, 838, 1181, 1634
SfaNI	GCATC	3 cut(s)	772, 1378, 1627
SfcI	CTRYAG	2 cut(s)	455, 744
Sfr274I	CTCGAG	1 cut(s)	1902
SinI	GGWCC	2 cut(s)	235, 1520
SlaI	CTCGAG	1 cut(s)	1902
SmiMI	CAYNNNNRTG	2 cut(s)	1131, 1966
SmlI	CTYRAG	2 cut(s)	375, 1902
SmoI	CTYRAG	2 cut(s)	375, 1902
SpeI	ACTAGT	1 cut(s)	637
SseBI	AGGCCT	2 cut(s)	758, 1830
SsiI	CCGC	4 cut(s)	207, 210, 336, 1331
SspMI	CTAG	3 cut(s)	429, 638, 1797
SstI	GAGCTC	3 cut(s)	53, 162, 1634
StuI	AGGCCT	2 cut(s)	758, 1830
StyD4I	CCNGG	5 cut(s)	99, 246, 282, 753, 1105
StyI	CCWWGG	2 cut(s)	231, 1737
TaaI	ACNGT	2 cut(s)	226, 1298
TaiI	ACGT	1 cut(s)	270
TaqI	TCGA	4 cut(s)	646, 1086, 1538, 1903
TatI	WGTACW	5 cut(s)	132, 509, 593, 1090, 1788
TauI	GCSGC	2 cut(s)	210, 213
TfiI	GAWTC	2 cut(s)	186, 1660
Tru1I	TTAA	9 cut(s)	534, 813, 1005, 1023, 1464, 1578, 1586, 1679, 1686
Tru9I	TTAA	9 cut(s)	534, 813, 1005, 1023, 1464, 1578, 1586, 1679, 1686
TscAI	CASTG	5 cut(s)	966, 1186, 1207, 1237, 1303
TseFI	GTSAC	3 cut(s)	196, 268, 727
Tsp45I	GTSAC	3 cut(s)	196, 268, 727
TspDTI	ATGAA	7 cut(s)	104, 410, 650, 1176, 1224, 1353, 1689
TspGWI	ACGGA	4 cut(s)	131, 184, 458, 746
TspRI	CASTG	5 cut(s)	966, 1186, 1207, 1237, 1303
Van91I	CCANNNNNTGG	1 cut(s)	769
VneI	GTGCAC	1 cut(s)	834
VpaK11BI	GGWCC	2 cut(s)	235, 1520
XapI	RAATTY	6 cut(s)	557, 818, 879, 1373, 1439, 1942
XceI	RCATGY	2 cut(s)	371, 1049
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1513
XhoI	CTCGAG	1 cut(s)	1902
XmnI	GAANNNNTTC	1 cut(s)	572
XspI	CTAG	3 cut(s)	429, 638, 1797
ZrmI	AGTACT	1 cut(s)	511

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.