Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0004693

Physical Location & Seq

Genomic Coordinates Reverse (-)

42090024 .. 42094838

Gene Structure 4815 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G029960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGAGTTCCCACTACATGACGCCGGAGCCACTCTCGGCCTCGGGTCGGAGCTCCGAGAAGATGAGCCTGCCGACACTTCAATCCAAGATGAAGTGCGACCCGGAAGGCTATGAGACGGAGCTCCTCCTTGTGTACAACCAATTCAAGTCGTCGCTGGAGCTCTTCAAGCAACAAGCCGATCTCGGATTCAAGTCCGTCACCGGCAGCGGCGGCAGCGACCCCACCGTGGCCAAGGACCTCGCCGACCGGGCCTTGTTTCTCGCCCACGTCACCCCCTTTTACCTGGCCCAATTGGCCCAATTCCCCTCACAGCTCTCCGAGTTTCTGCACTCCTCCGCCCGAACGCTTCCCTCTGGTCTCAGATTGCATGTTGCGCAAGCTCTCATTCTTCTTATGAACAGAAAGATGGTGGATATTGCAGACAATCTAGGTTTGTTCATGGAGATACAGACTTATGGCGATAAGGCTTTAAAGACCCTGGCATACAATCATGTCATACATAGCATAAAGCGAATGAATATGAAGCATAAGAACGAAGCTAAGAATCGGGTGCTTCAGAATGTCTTGTTTCGGATGCTACAGCTAGAGGATGAAACAAAAGCAAAGAGAGCACTTATCACTCTGCGTGAGCTTCACCGGAGAAAGGTGTGGTTTGATGAAAATACAGCGAACGCAATCTGCTCTGCATGTTTTCATCCATCGTCGAGGATAATGATTGCTTGTCTCTCATTTCTGCTTGATTACGAGAAGATTGAGGAGGAGGATGATAGTGATGCGTCAAGTAGTGATGAGGACACTCCTATTAAATCTCATCTAGCCATTAATAGAGAGGATATATATAAGGCGCACCATAAGGGTACACTTGCTAGCAAGAAGAAAAAGAAAGCAAAACTGCAGCGTGCCATCCGTAGCCTGAAAAAACAGCAACGCGTAACATCAGAAAAAAGTACTTCAAATTATCATACGCCACTTAATCATTTGAGAGATCCACAGGAATTCGCTGAGAAGCTATTCTCCCGTCTTCAAAATAGTACAAGAGTTGAACGCTTTGAGGTCAAAATGATGATGTTGAAAGTAGTTGCTCGAACTATTGGGCTTCATCGCTTGGTTCTGTTGAACTTTTATCCTTATTTTATCAACTACATTACGCCTCATCAAAATGGTGTCACTGAATTACTCGCTGCAGCAGTACAGGCCTGCCATGATATGGTTCCTCCTGATGCAGTTGAACCACTTTTCAAACAGATAGTTAACAAATTTATAGATGATCGTGCACAGCCAGAGGCCATAGCTGTTGGACTGAATACAACAAGGGAAATTTGTTTACGAATGCCTTTGTTGATGACAGAAGATTTGCTGCAAGATCTTGCATTATATAAGAAATCACATACAAAAGCAGTGTCAGTAGCAGCCCGTTCGCTTATTGGCTTATTCAGAGAGCTTAACCCCTCGCTGCTGATTAAGAAGGATCGTGGTCGCCAACATGTTGACTCAAAGGCAAGGCCAAAAGCGTATGGAGAAGTCGATGTACTTAGCAATAGTGATGATGATGATGATGATGAACCTTCAGTAAGGGGCACTGATGAGATGGTAGCTTCCAGTGATGATGAAGGCTTGCAAATAACCAACACTGATAGTGGAAGTGAAGATGACAACATGATATCTGAAGATGGTGATGAGATAGATGAGAATGACAGTGATGTGAGTGGTGATGAGGATGAGGTGGAAGCGGAGGATGAAGATGAGGATGAGGATGAGGAAGAGAATACAGAGGATGAGGAGGAAGAATTTGACAATAATGATGCCAACGATGGTGGATCTGGAGTAAAAGAAAACATAGCAAAAAAGAGGAAATTTGCTGATTTTGATACACAACTTAATGACGCTGAAGCAAGTCTTAGGACTTTGAAGAGATTAGCCAAAGAAAATATGGGTCCTGCTCCATCAGACTCGACAGATGGTTTTCTTTCTAATGAGGACTTCCGGAGGATTAAGGAATTAAAGGCAAAGCAGCGATTGGCTCAGCAGGGGTTGTTGAAAAAGAGCTCAGATGCGAAGTCAACAGCATTCAAGATTCCCACTTCTGATGAATTAAGCATTAAGCGAATAGATCCTGCTAAGCTTGAAGTCCATGTAAAAAGAAGAATGACCAAGGAGGAGAAGCTGGCATTAGTGAAAGCAGGGAGGGAGGATAGAGGGAAGTACATGGCTAAAGCTGCTGTAAAACAGAAGAAGTCGGGAGGCCTGAGCAATAAGCAGAAGGAACATAAGAAGGCTATGCCACTTGTTGCAAAGAGGGCAAAGGTAGCTAAATCTCGAGTGCAAAAACGCAAAAAGCAGCAGCTTTCTGGCAAAAATTTCCGAGGGAAGAAAGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC130_3NT SDA1

Protein Analysis

794

Amino Acids

89.68

Weight (kDa)

7.08

Isoelectric Point (pI)

48.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SDA1_HEAT	PF08158	86 - 462	1.1e-127	SDA1, HEAT repeat
SDA1_C	PF21638	747 - 792	1.5e-06	SDA1, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13160 AT4G31520 AT4G31520
fragaria_vesca	FvH4_4g25230 FvH4_4g25230 FvH4_4g25230
malus_domestica	MD16G1105900.v1.1
prunus_persica	Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1
pyrus_communis	pycom16g09000
rosa_chinensis	RchiOBHm_Chr4g0432421
rosa_laevigata	RLG00000002235 RLG00000003004 RLG00000006844
rosa_multiflora	Rmu_sc0001084.1_g000021 Rmu_sc0004638.1_g000008
rosa_roxburghii	Rroxscaffold_3G00239540 Rroxscaffold_5G00373890
rosa_rugosa	Rorug04G0258500 Rorug04G0258600 Rorug07G0201100
rosa_samantha	Rh4AG314100 Rh4BG321900 Rh4CG337000 Rh4DG317600 Rh7BG357200 Rh7DG347600
rosa_wichuraiana	Rw4G027310 Rw7G029620 Rw7G029960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	375
AccB7I	CCANNNNNTGG	1 cut(s)	1207
AccII	CGCG	1 cut(s)	930
AccIII	TCCGGA	1 cut(s)	1983
AciI	CCGC	4 cut(s)	207, 210, 336, 1730
AclWI	GGATC	4 cut(s)	980, 1476, 1825, 2105
AcoI	YGGCCR	1 cut(s)	228
AcsI	RAATTY	6 cut(s)	995, 1256, 1317, 1787, 1853, 2356
AcuI	CTGAAG	4 cut(s)	539, 1551, 1686, 1908
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	7 cut(s)	134, 859, 949, 1033, 1191, 1530, 2204
AfiI	CCNNNNNNNGG	4 cut(s)	45, 226, 643, 1207
AflIII	ACRYGT	2 cut(s)	928, 1483
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	2 cut(s)	282, 477
Alw21I	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2048
Alw26I	GTCTC	3 cut(s)	107, 362, 728
Alw44I	GTGCAC	1 cut(s)	1272
AlwI	GGATC	4 cut(s)	980, 1476, 1825, 2105
Ama87I	CYCGRG	2 cut(s)	40, 2316
Aor13HI	TCCGGA	1 cut(s)	1983
AoxI	GGCC	9 cut(s)	36, 228, 249, 285, 294, 1194, 1284, 1502, 2242
ApaLI	GTGCAC	1 cut(s)	1272
ApoI	RAATTY	6 cut(s)	995, 1256, 1317, 1787, 1853, 2356
ArsI	GACNNNNNNTTYG	4 cut(s)	1336, 1368, 1385, 1417
AseI	ATTAAT	1 cut(s)	822
Asp700I	GAANNNNTTC	1 cut(s)	1010
AspLEI	GCGC	2 cut(s)	376, 847
AspS9I	GGNCC	5 cut(s)	235, 249, 286, 295, 1934
AsuC2I	CCSGG	2 cut(s)	101, 248
AsuHPI	GGTGA	5 cut(s)	190, 262, 626, 1685, 1721
AsuNHI	GCTAGC	1 cut(s)	866
AvaI	CYCGRG	2 cut(s)	40, 2316
AvaII	GGWCC	2 cut(s)	235, 1934
BaeGI	GKGCMC	2 cut(s)	1276, 1580
BalI	TGGCCA	1 cut(s)	230
BanII	GRGCYC	4 cut(s)	53, 123, 162, 2048
BarI	GAAGNNNNNNTAC	2 cut(s)	1512, 1544
BbsI	GAAGAC	1 cut(s)	1013
Bbv12I	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2048
BccI	CCATC	8 cut(s)	400, 706, 911, 1582, 1664, 1805, 1951, 1952
BcgI	CGANNNNNNTGC	2 cut(s)	1398, 1432
BciT130I	CCWGG	2 cut(s)	284, 479
BcnI	CCSGG	2 cut(s)	101, 248
BcoDI	GTCTC	3 cut(s)	107, 362, 728
BfaI	CTAG	4 cut(s)	428, 584, 815, 867
BfmI	CTRYAG	3 cut(s)	578, 893, 1182
BglI	GCCNNNNNGGC	2 cut(s)	248, 293
BglII	AGATCT	1 cut(s)	1363
BlpI	GCTNAGC	2 cut(s)	2022, 2118
BmcAI	AGTACT	1 cut(s)	949
Bme1390I	CCNGG	4 cut(s)	101, 248, 284, 479
Bme18I	GGWCC	2 cut(s)	235, 1934
BmeT110I	CYCGRG	2 cut(s)	40, 2316
BmgBI	CACGTC	1 cut(s)	268
BmgT120I	GGNCC	5 cut(s)	235, 249, 286, 295, 1934
BmiI	GGNNCC	3 cut(s)	27, 1212, 1935
BmrFI	CCNGG	4 cut(s)	101, 248, 284, 479
BmsI	GCATC	5 cut(s)	564, 763, 1210, 1792, 2041
BmtI	GCTAGC	1 cut(s)	870
BpiI	GAAGAC	1 cut(s)	1013
BplI	GAGNNNNNCTC	2 cut(s)	17, 49
BpmI	CTGGAG	2 cut(s)	176, 1842
Bpu10I	CCTNAGC	1 cut(s)	2246
Bpu1102I	GCTNAGC	2 cut(s)	2022, 2118
BpuMI	CCSGG	2 cut(s)	101, 248
BsaHI	GRCGYC	1 cut(s)	20
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	6 cut(s)	39, 225, 231, 477, 2151, 2362
BsaWI	WCCGGW	2 cut(s)	636, 1983
Bsc4I	CCNNNNNNNGG	4 cut(s)	45, 226, 643, 1207
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	1 cut(s)	1599
BseAI	TCCGGA	1 cut(s)	1983
BseBI	CCWGG	2 cut(s)	284, 479
BseDI	CCNNGG	6 cut(s)	39, 225, 231, 477, 2151, 2362
BseLI	CCNNNNNNNGG	4 cut(s)	45, 226, 643, 1207
BseMII	CTCAG	5 cut(s)	373, 993, 2036, 2061, 2237
BseNI	ACTGG	1 cut(s)	1599
BseRI	GAGGAG	6 cut(s)	113, 322, 770, 773, 1793, 2171
BseSI	GKGCMC	2 cut(s)	1276, 1580
BsgI	GTGCAG	1 cut(s)	311
Bsh1236I	CGCG	1 cut(s)	930
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	9 cut(s)	38, 230, 251, 287, 296, 1196, 1286, 1504, 2244
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2048
BsiHKCI	CYCGRG	2 cut(s)	40, 2316
BsiSI	CCGG	6 cut(s)	23, 101, 201, 247, 637, 1984
BslI	CCNNNNNNNGG	4 cut(s)	45, 226, 643, 1207
BsmAI	GTCTC	3 cut(s)	107, 362, 728
BsmBI	CGTCTC	1 cut(s)	107
BsmI	GAATGC	2 cut(s)	1335, 2066
BsnI	GGCC	9 cut(s)	38, 230, 251, 287, 296, 1196, 1286, 1504, 2244
Bso31I	GGTCTC	1 cut(s)	362
BsoBI	CYCGRG	2 cut(s)	40, 2316
Bsp1286I	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1580, 2048
Bsp13I	TCCGGA	1 cut(s)	1983
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1817, 2110
Bsp1720I	GCTNAGC	2 cut(s)	2022, 2118
BspACI	CCGC	4 cut(s)	207, 210, 336, 1730
BspANI	GGCC	9 cut(s)	38, 230, 251, 287, 296, 1196, 1286, 1504, 2244
BspCNI	CTCAG	5 cut(s)	372, 994, 2035, 2060, 2238
BspEI	TCCGGA	1 cut(s)	1983
BspFNI	CGCG	1 cut(s)	930
BspLI	GGNNCC	3 cut(s)	27, 1212, 1935
BspMAI	CTGCAG	2 cut(s)	897, 1186
BspOI	GCTAGC	1 cut(s)	870
BspPI	GGATC	4 cut(s)	980, 1476, 1825, 2105
BspQI	GCTCTTC	1 cut(s)	167
BspTNI	GGTCTC	1 cut(s)	362
BsrFI	RCCGGY	1 cut(s)	200
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	1 cut(s)	1599
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	6 cut(s)	39, 225, 231, 477, 2151, 2362
BssMI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1817, 2110
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	231, 2151
Bst2UI	CCWGG	2 cut(s)	284, 479
Bst4CI	ACNGT	2 cut(s)	226, 1697
Bst6I	CTCTTC	3 cut(s)	167, 1755, 1904
BstACI	GRCGYC	1 cut(s)	20
BstAUI	TGTACA	1 cut(s)	132
BstC8I	GCNNGC	7 cut(s)	68, 378, 868, 900, 1198, 1616, 2166
BstDEI	CTNAG	9 cut(s)	359, 540, 1002, 1532, 1898, 2022, 2047, 2118, 2246
BstDSI	CCRYGG	1 cut(s)	225
BstFNI	CGCG	1 cut(s)	930
BstHHI	GCGC	2 cut(s)	376, 847
BstKTI	GATC	7 cut(s)	181, 988, 1270, 1366, 1471, 1820, 2113
BstMAI	GTCTC	3 cut(s)	107, 362, 728
BstMBI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1817, 2110
BstMCI	CGRYCG	1 cut(s)	247
BstNI	CCWGG	2 cut(s)	284, 479
BstNSI	RCATGY	3 cut(s)	371, 690, 1487
BstSCI	CCNGG	4 cut(s)	99, 246, 282, 477
BstSFI	CTRYAG	3 cut(s)	578, 893, 1182
BstSLI	GKGCMC	2 cut(s)	1276, 1580
BstUI	CGCG	1 cut(s)	930
BstV2I	GAAGAC	1 cut(s)	1013
BstX2I	RGATCY	4 cut(s)	985, 1363, 1817, 2110
BstYI	RGATCY	4 cut(s)	985, 1363, 1817, 2110
BsuRI	GGCC	9 cut(s)	38, 230, 251, 287, 296, 1196, 1286, 1504, 2244
BtgI	CCRYGG	1 cut(s)	225
BtgZI	GCGATG	1 cut(s)	1085
BtrI	CACGTC	1 cut(s)	268
BtsI	GCAGTG	1 cut(s)	1404
BtsIMutI	CAGTG	6 cut(s)	1167, 1404, 1578, 1606, 1629, 1702
Cac8I	GCNNGC	7 cut(s)	68, 378, 868, 900, 1198, 1616, 2166
CfoI	GCGC	2 cut(s)	376, 847
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	5 cut(s)	235, 249, 286, 295, 1934
CseI	GACGC	3 cut(s)	28, 765, 1892
Csp6I	GTAC	7 cut(s)	133, 858, 948, 1032, 1190, 1529, 2203
CspCI	CAANNNNNGTGG	2 cut(s)	1795, 1830
CviQI	GTAC	7 cut(s)	133, 858, 948, 1032, 1190, 1529, 2203
DdeI	CTNAG	9 cut(s)	359, 540, 1002, 1532, 1898, 2022, 2047, 2118, 2246
DpnI	GATC	7 cut(s)	180, 987, 1269, 1365, 1470, 1819, 2112
DpnII	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1817, 2110
DraI	TTTAAA	1 cut(s)	471
EaeI	YGGCCR	1 cut(s)	228
Eam1104I	CTCTTC	3 cut(s)	167, 1755, 1904
EarI	CTCTTC	3 cut(s)	167, 1755, 1904
EciI	GGCGGA	1 cut(s)	325
Ecl136II	GAGCTC	4 cut(s)	51, 121, 160, 2046
Eco130I	CCWWGG	2 cut(s)	231, 2151
Eco147I	AGGCCT	2 cut(s)	1196, 2244
Eco24I	GRGCYC	4 cut(s)	53, 123, 162, 2048
Eco31I	GGTCTC	1 cut(s)	362
Eco32I	GATATC	1 cut(s)	1662
Eco47I	GGWCC	2 cut(s)	235, 1934
Eco53kI	GAGCTC	4 cut(s)	51, 121, 160, 2046
Eco57I	CTGAAG	4 cut(s)	539, 1551, 1686, 1908
Eco88I	CYCGRG	2 cut(s)	40, 2316
EcoICRI	GAGCTC	4 cut(s)	51, 121, 160, 2046
EcoO109I	RGGNCCY	2 cut(s)	235, 1934
EcoRI	GAATTC	1 cut(s)	995
EcoRII	CCWGG	2 cut(s)	282, 477
EcoRV	GATATC	1 cut(s)	1662
EcoT14I	CCWWGG	2 cut(s)	231, 2151
EcoT38I	GRGCYC	4 cut(s)	53, 123, 162, 2048
ErhI	CCWWGG	2 cut(s)	231, 2151
Esp3I	CGTCTC	1 cut(s)	107
FalI	AAGNNNNNCTT	2 cut(s)	1881, 1913
FriOI	GRGCYC	4 cut(s)	53, 123, 162, 2048
FspBI	CTAG	4 cut(s)	428, 584, 815, 867
FspI	TGCGCA	1 cut(s)	375
GlaI	GCGC	2 cut(s)	375, 846
GsuI	CTGGAG	2 cut(s)	176, 1842
HaeIII	GGCC	9 cut(s)	38, 230, 251, 287, 296, 1196, 1286, 1504, 2244
HapII	CCGG	6 cut(s)	23, 101, 201, 247, 637, 1984
HgaI	GACGC	3 cut(s)	28, 765, 1892
HhaI	GCGC	2 cut(s)	376, 847
Hin1I	GRCGYC	1 cut(s)	20
Hin6I	GCGC	2 cut(s)	374, 845
HinP1I	GCGC	2 cut(s)	374, 845
HincII	GTYRAC	3 cut(s)	1252, 1489, 2061
HindII	GTYRAC	3 cut(s)	1252, 1489, 2061
HindIII	AAGCTT	1 cut(s)	2120
HinfI	GANTC	5 cut(s)	186, 544, 1490, 1949, 2074
HpaI	GTTAAC	1 cut(s)	1252
HpaII	CCGG	6 cut(s)	23, 101, 201, 247, 637, 1984
HphI	GGTGA	5 cut(s)	190, 262, 626, 1685, 1721
Hpy166II	GTNNAC	7 cut(s)	133, 860, 1252, 1274, 1325, 1489, 2061
Hpy188III	TCNNGA	6 cut(s)	1217, 1821, 1984, 2071, 2238, 2316
Hpy8I	GTNNAC	7 cut(s)	133, 860, 1252, 1274, 1325, 1489, 2061
Hpy99I	CGWCG	2 cut(s)	154, 706
HpyAV	CCTTC	6 cut(s)	98, 1459, 1575, 1604, 2254, 2266
HpyCH4III	ACNGT	2 cut(s)	226, 1697
HpyCH4IV	ACGT	1 cut(s)	267
HpyF3I	CTNAG	9 cut(s)	359, 540, 1002, 1532, 1898, 2022, 2047, 2118, 2246
HpySE526I	ACGT	1 cut(s)	267
Hsp92I	GRCGYC	1 cut(s)	20
HspAI	GCGC	2 cut(s)	374, 845
Kpn2I	TCCGGA	1 cut(s)	1983
KspAI	GTTAAC	1 cut(s)	1252
Kzo9I	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1817, 2110
LguI	GCTCTTC	1 cut(s)	167
LmnI	GCTCC	7 cut(s)	25, 48, 56, 118, 126, 157, 1945
LweI	GCATC	5 cut(s)	564, 763, 1210, 1792, 2041
MaeI	CTAG	4 cut(s)	428, 584, 815, 867
MaeII	ACGT	1 cut(s)	267
MaeIII	GTNAC	4 cut(s)	196, 268, 931, 1165
MalI	GATC	7 cut(s)	180, 987, 1269, 1365, 1470, 1819, 2112
MboI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1817, 2110
MfeI	CAATTG	1 cut(s)	290
MflI	RGATCY	4 cut(s)	985, 1363, 1817, 2110
MhlI	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1580, 2048
MlsI	TGGCCA	1 cut(s)	230
MluI	ACGCGT	1 cut(s)	928
MluNI	TGGCCA	1 cut(s)	230
MlyI	GAGTC	2 cut(s)	1484, 1943
MmeI	TCCRAC	2 cut(s)	26, 1276
Mox20I	TGGCCA	1 cut(s)	230
MroI	TCCGGA	1 cut(s)	1983
MroXI	GAANNNNTTC	1 cut(s)	1010
MscI	TGGCCA	1 cut(s)	230
MslI	CAYNNNNRTG	2 cut(s)	1158, 2380
Msp20I	TGGCCA	1 cut(s)	230
MspA1I	CMGCKG	1 cut(s)	207
MspI	CCGG	6 cut(s)	23, 101, 201, 247, 637, 1984
MspR9I	CCNGG	4 cut(s)	101, 248, 284, 479
MunI	CAATTG	1 cut(s)	290
Mva1269I	GAATGC	2 cut(s)	1335, 2066
MvaI	CCWGG	2 cut(s)	284, 479
MvnI	CGCG	1 cut(s)	930
NciI	CCSGG	2 cut(s)	101, 248
NdeII	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1817, 2110
NheI	GCTAGC	1 cut(s)	866
NlaIV	GGNNCC	3 cut(s)	27, 1212, 1935
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	3 cut(s)	196, 268, 1165
NsbI	TGCGCA	1 cut(s)	375
NspI	RCATGY	3 cut(s)	371, 690, 1487
PaeR7I	CTCGAG	1 cut(s)	2316
PceI	AGGCCT	2 cut(s)	1196, 2244
PciI	ACATGT	1 cut(s)	1483
PciSI	GCTCTTC	1 cut(s)	167
PctI	GAATGC	2 cut(s)	1335, 2066
PdmI	GAANNNNTTC	1 cut(s)	1010
PfeI	GAWTC	3 cut(s)	186, 544, 2074
PflMI	CCANNNNNTGG	1 cut(s)	1207
PleI	GAGTC	2 cut(s)	1484, 1943
PpsI	GAGTC	2 cut(s)	1484, 1943
PpuMI	RGGWCCY	2 cut(s)	235, 1934
PscI	ACATGT	1 cut(s)	1483
PshBI	ATTAAT	1 cut(s)	822
Psp124BI	GAGCTC	4 cut(s)	53, 123, 162, 2048
Psp5II	RGGWCCY	2 cut(s)	235, 1934
Psp6I	CCWGG	2 cut(s)	282, 477
PspGI	CCWGG	2 cut(s)	282, 477
PspN4I	GGNNCC	3 cut(s)	27, 1212, 1935
PspPI	GGNCC	5 cut(s)	235, 249, 286, 295, 1934
PspPPI	RGGWCCY	2 cut(s)	235, 1934
PstI	CTGCAG	2 cut(s)	897, 1186
PsuI	RGATCY	4 cut(s)	985, 1363, 1817, 2110
RsaI	GTAC	7 cut(s)	134, 859, 949, 1033, 1191, 1530, 2204
RsaNI	GTAC	7 cut(s)	133, 858, 948, 1032, 1190, 1529, 2203
RseI	CAYNNNNRTG	2 cut(s)	1158, 2380
SacI	GAGCTC	4 cut(s)	53, 123, 162, 2048
SapI	GCTCTTC	1 cut(s)	167
Sau3AI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1817, 2110
Sau96I	GGNCC	5 cut(s)	235, 249, 286, 295, 1934
ScaI	AGTACT	1 cut(s)	949
SchI	GAGTC	2 cut(s)	1484, 1943
ScrFI	CCNGG	4 cut(s)	101, 248, 284, 479
SduI	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1580, 2048
SfaNI	GCATC	5 cut(s)	564, 763, 1210, 1792, 2041
SfcI	CTRYAG	3 cut(s)	578, 893, 1182
SfiI	GGCCNNNNNGGCC	1 cut(s)	293
Sfr274I	CTCGAG	1 cut(s)	2316
SinI	GGWCC	2 cut(s)	235, 1934
SlaI	CTCGAG	1 cut(s)	2316
SmiMI	CAYNNNNRTG	2 cut(s)	1158, 2380
SmlI	CTYRAG	1 cut(s)	2316
SmoI	CTYRAG	1 cut(s)	2316
SseBI	AGGCCT	2 cut(s)	1196, 2244
SsiI	CCGC	4 cut(s)	207, 210, 336, 1730
SspMI	CTAG	4 cut(s)	428, 584, 815, 867
SstI	GAGCTC	4 cut(s)	53, 123, 162, 2048
StuI	AGGCCT	2 cut(s)	1196, 2244
StyD4I	CCNGG	4 cut(s)	99, 246, 282, 477
StyI	CCWWGG	2 cut(s)	231, 2151
TaaI	ACNGT	2 cut(s)	226, 1697
TaiI	ACGT	1 cut(s)	270
TaqI	TCGA	5 cut(s)	704, 1084, 1524, 1952, 2317
TatI	WGTACW	6 cut(s)	132, 947, 1031, 1189, 1528, 2202
TauI	GCSGC	2 cut(s)	210, 213
TfiI	GAWTC	3 cut(s)	186, 544, 2074
TscAI	CASTG	6 cut(s)	1174, 1404, 1585, 1606, 1636, 1702
TseFI	GTSAC	3 cut(s)	196, 268, 1165
Tsp45I	GTSAC	3 cut(s)	196, 268, 1165
TspGWI	ACGGA	3 cut(s)	131, 184, 896
TspRI	CASTG	6 cut(s)	1174, 1404, 1585, 1606, 1636, 1702
Van91I	CCANNNNNTGG	1 cut(s)	1207
VneI	GTGCAC	1 cut(s)	1272
VpaK11BI	GGWCC	2 cut(s)	235, 1934
VspI	ATTAAT	1 cut(s)	822
XapI	RAATTY	6 cut(s)	995, 1256, 1317, 1787, 1853, 2356
XceI	RCATGY	3 cut(s)	371, 690, 1487
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1927
XhoI	CTCGAG	1 cut(s)	2316
XmnI	GAANNNNTTC	1 cut(s)	1010
XspI	CTAG	4 cut(s)	428, 584, 815, 867
ZrmI	AGTACT	1 cut(s)	949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.