Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0004693

Physical Location & Seq

Genomic Coordinates Reverse (-)

27063683 .. 27069349

Gene Structure 5667 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g25230.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2397 bp

ATGAGTTCCCACTACCTCTCGCCGGAGCCACTCTCGGCCTCGGGTCGGAGCTCCGAGAAGATGAGCCTCCCGACGCTTCAATCCAAGATGAAGTGCGACCCGGAAGGGTACGAAACGGAGCTTCTCCTCGTCTACAACCAATTCAAGTCGTCGCTGGAGCTCTTCAAGCAGCAAGCCGATCTCGGATTCAAGTCCGTCACCGGCAGCGGGGGCAGCGACCCAACCGTCGCCAAGGACCTCGCCGACCGGGCCATGTTTCTGGCCCACGTCACCCCCTTCTACCCGGCCCAATTGGCCCAATTCCCATCTCAGCTCTCCGAGTTTCTCCACTCCTCTGCTCGGACTCTTCCCTCTGGTCTCAGATTGCATGTTGCTCAAGCTCTCATTCTTCTTATGAACCGAAAGATGGTGGATATTGGAGACAATCTGGGTTTGTTTATGGAGTTACAGAGTTACGGCGATAAGGCTTTAAAGATACTGGCTTACAATCATGTCATTCATAGCATAAAGAGAATGAATTTGAAGCATAAGAATGAGGCTAAGAATCGGGCGCTTCAGAATGTCTTGTTTCGGATGCTACAGCTAGAGGATGAAACAAAGGCAAAGAGAGCACTTATCACTCTACGTGAGCTTCACCGGAGAAAGGTGTGGTTTGATGAAAATACAGCAAACGCGATCTGCTCTGCATGTTTTCATCCATCGTCGAGGATAATGATTGCTTGTCTCTCATTTCTGCTTGATTATGAGAAGATTGAAGAGGAGGATGATAGTGATGCATCGAGTAGTGATGAGGACACTCCTCATAAAGCCCATGTAGCCATTAATAGAGAGGATATATACAAGGCGCACCATAAGGGTACACTTGCTAGCAAGAAGAAAAAGAAAGCAAAACTGCAGCGTGCCATCCGTAGCCTGAAAAAACAGCAACGCGTAACATCAGAAAAAAGTACATCGAATTATCATACACCACTTAATCATTTGAGAGATCCACAGGAATTCGCTGAGAAGCTATTCTCCCGTCTTCAAAATAGTACAAAAGTTGAACGCTTTGAGGTCAAGATGATGATGTTGAAAGTAGTTGCTCGAACGATTGGGCTTCATCGCTTGGTTGTGTTGAACTTTTATCCTTATTTTATGAACTACATTACGCCTCATCAAAATGGTGTCACTGAATTACTCGCTGCAGCAGTCCAGGCCTGCCATGATATGGTTCCTCCTGATGCAGTTGAACCACTTTTCAAACAAATAATAATCAAATTTGTAGATGATCGTGCACAGCCAGAGGCTATAGCTGTTGGACTGAATACTATAAGGGAAATATGTTTACGAATGCCTCTGTTGATGACGGAAGATTTGCTGCAAGATCTTGCATTATATAAGAAATCACATACCAAAGCAGTTTCAGTAGCAGCCCGTTCACTCATTGGCTTATTCAGAGAGCTTAACCCCTCCCTGCTGATTAAGAAGGATCGTGGCCGCCAACATGTTAACTCAAAGGCAAGGCCAAAAGCGTATGGAGAAGTCGATGTACTTAACGATGTTCCTGGTCTTGATTTACTGAAAAATGATGATGACAATGAGGACAGTGATGATAATGACGACGATGATGATGAACCATCATTAAGGGGCACTGATGAGATGCTAGCTTCCAGTGATGATGAAGGCTTGCAAATAACCAACACTGATAGCGGAAGTGAAAATGACGACATGATGTCTGAAGATGGTGATGAGATAGATGAGAATGACAGTGATGTGAGTGGTGATGAGGATGAGGTGGAAGCGGAGGATGAAGATGAGGATGAGGAGGAAGAATCTGACAAAAATGATGGATCTGGAGTAAAAGAAAACACGGCAAAAAAGAGGAAATTTGCTGATTTTGATGCACAACTTAATGATGCTGAAGCAAGTCTTAGGACTTTGAAGAGATTAGCCAAAGAAAATATGGGTTCTGTGCCTTCAGACTCGACAGATGGTTTTCTTTCTAATGAGGATTTCCGAAGGATTAAGGAATTAAAGGCAAAGCAGCGATTGACTCAGCAGGGGTTGGTGAAAAAGAGCTCAGATGCAAAGTCGACAGCATTCAGGATTCCAACTTCCGATGAATTAAGCAGTAAGCGAGTTGATCCTGCTAAGCTTGAAGTCCATGTAAAAAGAAGAATGACTAAGGAGGAGAAGCTGGCTTTAGTGAAAGCAGGGAGGGAGGATAGAGGGAAGTACATTTCTAAAGCTGCTGTGAAACAGAAGAAGACGGGAGGTCTGAGCAATAAGCAGAAGGAACACAAGAAGGCTATGCCACTTGTTGCAAAGAGGGCAAAGGTTGCAAAGTCTCGAGTGGAGAAACGGAAAAAGCAGCAGCTTTCTGGCAAAAATTTCAGAGGGAAGAAAGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC130_3NT SDA1

Protein Analysis

799

Amino Acids

90.02

Weight (kDa)

7.65

Isoelectric Point (pI)

47.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SDA1_HEAT	PF08158	86 - 462	1.8e-128	SDA1, HEAT repeat
SDA1_dom	PF05285	573 - 732	8.6e-07	SDA1, conserved domain
SDA1_C	PF21638	751 - 796	1.8e-07	SDA1, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13160 AT4G31520 AT4G31520
fragaria_vesca	FvH4_4g25230 FvH4_4g25230 FvH4_4g25230
malus_domestica	MD16G1105900.v1.1
prunus_persica	Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1
pyrus_communis	pycom16g09000
rosa_chinensis	RchiOBHm_Chr4g0432421
rosa_laevigata	RLG00000002235 RLG00000003004 RLG00000006844
rosa_multiflora	Rmu_sc0001084.1_g000021 Rmu_sc0004638.1_g000008
rosa_roxburghii	Rroxscaffold_3G00239540 Rroxscaffold_5G00373890
rosa_rugosa	Rorug04G0258500 Rorug04G0258600 Rorug07G0201100
rosa_samantha	Rh4AG314100 Rh4BG321900 Rh4CG337000 Rh4DG317600 Rh7BG357200 Rh7DG347600
rosa_wichuraiana	Rw4G027310 Rw7G029620 Rw7G029960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	224
AccB7I	CCANNNNNTGG	1 cut(s)	1207
AccI	GTMKAC	2 cut(s)	132, 2072
AccII	CGCG	2 cut(s)	674, 930
AciI	CCGC	4 cut(s)	207, 1477, 1689, 1781
AclWI	GGATC	4 cut(s)	980, 1476, 1837, 2117
AcoI	YGGCCR	1 cut(s)	1474
AcsI	RAATTY	5 cut(s)	517, 995, 1256, 1865, 2368
AcuI	CTGAAG	4 cut(s)	539, 1737, 1920, 1941
AfaI	GTAC	6 cut(s)	110, 859, 949, 1033, 1530, 2216
AfiI	CCNNNNNNNGG	7 cut(s)	22, 45, 207, 339, 406, 643, 1207
AflIII	ACRYGT	2 cut(s)	928, 1483
AhdI	GACNNNNNGTC	2 cut(s)	1711, 2253
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	2 cut(s)	1191, 1543
Alw21I	GWGCWC	5 cut(s)	53, 162, 613, 1276, 2060
Alw26I	GTCTC	4 cut(s)	362, 414, 728, 2331
Alw44I	GTGCAC	1 cut(s)	1272
AlwI	GGATC	4 cut(s)	980, 1476, 1837, 2117
Ama87I	CYCGRG	2 cut(s)	40, 2328
AoxI	GGCC	8 cut(s)	36, 249, 261, 285, 294, 1194, 1474, 1502
ApaLI	GTGCAC	1 cut(s)	1272
ApoI	RAATTY	5 cut(s)	517, 995, 1256, 1865, 2368
ArsI	GACNNNNNNTTYG	2 cut(s)	1336, 1368
AseI	ATTAAT	1 cut(s)	822
Asp700I	GAANNNNTTC	1 cut(s)	1010
AspLEI	GCGC	2 cut(s)	553, 847
AspS9I	GGNCC	5 cut(s)	235, 249, 262, 286, 295
AsuC2I	CCSGG	3 cut(s)	101, 248, 284
AsuHPI	GGTGA	6 cut(s)	190, 262, 626, 1736, 1772, 2059
AsuNHI	GCTAGC	2 cut(s)	866, 1642
AvaI	CYCGRG	2 cut(s)	40, 2328
AvaII	GGWCC	1 cut(s)	235
BaeGI	GKGCMC	2 cut(s)	1276, 1631
BanII	GRGCYC	3 cut(s)	53, 162, 2060
BarI	GAAGNNNNNNTAC	2 cut(s)	1512, 1544
BbsI	GAAGAC	2 cut(s)	1013, 2252
Bbv12I	GWGCWC	5 cut(s)	53, 162, 613, 1276, 2060
BccI	CCATC	8 cut(s)	313, 400, 706, 911, 1624, 1715, 1820, 1964
BceAI	ACGGC	2 cut(s)	472, 1866
BciT130I	CCWGG	2 cut(s)	1193, 1545
BcnI	CCSGG	3 cut(s)	101, 248, 284
BcoDI	GTCTC	4 cut(s)	362, 414, 728, 2331
BfaI	CTAG	3 cut(s)	584, 867, 1643
BfmI	CTRYAG	4 cut(s)	578, 893, 1182, 1287
BfoI	RGCGCY	1 cut(s)	554
BglI	GCCNNNNNGGC	2 cut(s)	248, 293
BglII	AGATCT	1 cut(s)	1363
BlpI	GCTNAGC	1 cut(s)	2130
Bme1390I	CCNGG	5 cut(s)	101, 248, 284, 1193, 1545
Bme18I	GGWCC	1 cut(s)	235
BmeRI	GACNNNNNGTC	2 cut(s)	1711, 2253
BmeT110I	CYCGRG	2 cut(s)	40, 2328
BmgBI	CACGTC	1 cut(s)	268
BmgT120I	GGNCC	5 cut(s)	235, 249, 262, 286, 295
BmiI	GGNNCC	2 cut(s)	27, 1212
BmrFI	CCNGG	5 cut(s)	101, 248, 284, 1193, 1545
BmsI	GCATC	8 cut(s)	564, 763, 785, 1210, 1629, 1870, 1885, 2053
BmtI	GCTAGC	2 cut(s)	870, 1646
BpiI	GAAGAC	2 cut(s)	1013, 2252
BplI	GAGNNNNNCTC	2 cut(s)	17, 49
BpmI	CTGGAG	2 cut(s)	176, 1854
Bpu1102I	GCTNAGC	1 cut(s)	2130
BpuEI	CTTGAG	1 cut(s)	360
BpuMI	CCSGG	3 cut(s)	101, 248, 284
BsaAI	YACGTR	1 cut(s)	626
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	2 cut(s)	39, 231
BsaWI	WCCGGW	1 cut(s)	636
Bsc4I	CCNNNNNNNGG	7 cut(s)	22, 45, 207, 339, 406, 643, 1207
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	2 cut(s)	483, 1650
BseBI	CCWGG	2 cut(s)	1193, 1545
BseDI	CCNNGG	2 cut(s)	39, 231
BseGI	GGATG	8 cut(s)	579, 595, 694, 769, 903, 1774, 1792, 1804
BseLI	CCNNNNNNNGG	7 cut(s)	22, 45, 207, 339, 406, 643, 1207
BseMII	CTCAG	6 cut(s)	323, 373, 993, 2048, 2073, 2249
BseNI	ACTGG	2 cut(s)	483, 1650
BseRI	GAGGAG	6 cut(s)	116, 322, 773, 789, 1817, 2183
BseSI	GKGCMC	2 cut(s)	1276, 1631
Bsh1236I	CGCG	2 cut(s)	674, 930
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	8 cut(s)	38, 251, 263, 287, 296, 1196, 1476, 1504
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	5 cut(s)	53, 162, 613, 1276, 2060
BsiHKCI	CYCGRG	2 cut(s)	40, 2328
BsiSI	CCGG	6 cut(s)	23, 101, 201, 247, 284, 637
BslI	CCNNNNNNNGG	7 cut(s)	22, 45, 207, 339, 406, 643, 1207
BsmAI	GTCTC	4 cut(s)	362, 414, 728, 2331
BsmI	GAATGC	2 cut(s)	1335, 2078
BsnI	GGCC	8 cut(s)	38, 251, 263, 287, 296, 1196, 1476, 1504
Bso31I	GGTCTC	1 cut(s)	362
BsoBI	CYCGRG	2 cut(s)	40, 2328
Bsp1286I	GDGCHC	6 cut(s)	53, 162, 613, 1276, 1631, 2060
Bsp143I	GATC	8 cut(s)	178, 675, 985, 1267, 1363, 1468, 1829, 2122
Bsp1720I	GCTNAGC	1 cut(s)	2130
BspACI	CCGC	4 cut(s)	207, 1477, 1689, 1781
BspANI	GGCC	8 cut(s)	38, 251, 263, 287, 296, 1196, 1476, 1504
BspCNI	CTCAG	6 cut(s)	322, 372, 994, 2047, 2072, 2250
BspFNI	CGCG	2 cut(s)	674, 930
BspLI	GGNNCC	2 cut(s)	27, 1212
BspMAI	CTGCAG	2 cut(s)	897, 1186
BspOI	GCTAGC	2 cut(s)	870, 1646
BspPI	GGATC	4 cut(s)	980, 1476, 1837, 2117
BspQI	GCTCTTC	1 cut(s)	167
BspTNI	GGTCTC	1 cut(s)	362
BsrFI	RCCGGY	1 cut(s)	200
BsrI	ACTGG	2 cut(s)	483, 1650
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	2 cut(s)	39, 231
BssMI	GATC	8 cut(s)	178, 675, 985, 1267, 1363, 1468, 1829, 2122
BssT1I	CCWWGG	1 cut(s)	231
Bst2UI	CCWGG	2 cut(s)	1193, 1545
Bst4CI	ACNGT	3 cut(s)	226, 1586, 1748
Bst6I	CTCTTC	4 cut(s)	167, 351, 750, 1916
BstAPI	GCANNNNNTGC	1 cut(s)	2318
BstBAI	YACGTR	1 cut(s)	626
BstC8I	GCNNGC	7 cut(s)	174, 868, 900, 1198, 1644, 1667, 2178
BstF5I	GGATG	8 cut(s)	579, 595, 694, 769, 903, 1774, 1792, 1804
BstFNI	CGCG	2 cut(s)	674, 930
BstH2I	RGCGCY	1 cut(s)	554
BstHHI	GCGC	2 cut(s)	553, 847
BstKTI	GATC	8 cut(s)	181, 678, 988, 1270, 1366, 1471, 1832, 2125
BstMAI	GTCTC	4 cut(s)	362, 414, 728, 2331
BstMBI	GATC	8 cut(s)	178, 675, 985, 1267, 1363, 1468, 1829, 2122
BstMCI	CGRYCG	1 cut(s)	247
BstNI	CCWGG	2 cut(s)	1193, 1545
BstNSI	RCATGY	3 cut(s)	371, 690, 1487
BstSCI	CCNGG	5 cut(s)	99, 246, 282, 1191, 1543
BstSFI	CTRYAG	4 cut(s)	578, 893, 1182, 1287
BstSLI	GKGCMC	2 cut(s)	1276, 1631
BstUI	CGCG	2 cut(s)	674, 930
BstV2I	GAAGAC	2 cut(s)	1013, 2252
BstX2I	RGATCY	3 cut(s)	985, 1363, 1829
BstXI	CCANNNNNNTGG	1 cut(s)	259
BstYI	RGATCY	3 cut(s)	985, 1363, 1829
BsuRI	GGCC	8 cut(s)	38, 251, 263, 287, 296, 1196, 1476, 1504
BtgZI	GCGATG	1 cut(s)	1085
BtrI	CACGTC	1 cut(s)	268
BtsCI	GGATG	8 cut(s)	579, 595, 694, 769, 903, 1774, 1792, 1804
BtsIMutI	CAGTG	6 cut(s)	1167, 1591, 1629, 1657, 1680, 1753
Cac8I	GCNNGC	7 cut(s)	174, 868, 900, 1198, 1644, 1667, 2178
CfoI	GCGC	2 cut(s)	553, 847
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	5 cut(s)	235, 249, 262, 286, 295
CseI	GACGC	1 cut(s)	82
Csp6I	GTAC	6 cut(s)	109, 858, 948, 1032, 1529, 2215
CviQI	GTAC	6 cut(s)	109, 858, 948, 1032, 1529, 2215
DpnI	GATC	8 cut(s)	180, 677, 987, 1269, 1365, 1470, 1831, 2124
DpnII	GATC	8 cut(s)	178, 675, 985, 1267, 1363, 1468, 1829, 2122
DraI	TTTAAA	1 cut(s)	471
DrdI	GACNNNNNNGTC	1 cut(s)	224
DriI	GACNNNNNGTC	2 cut(s)	1711, 2253
DseDI	GACNNNNNNGTC	1 cut(s)	224
EaeI	YGGCCR	1 cut(s)	1474
Eam1104I	CTCTTC	4 cut(s)	167, 351, 750, 1916
Eam1105I	GACNNNNNGTC	2 cut(s)	1711, 2253
EarI	CTCTTC	4 cut(s)	167, 351, 750, 1916
Ecl136II	GAGCTC	3 cut(s)	51, 160, 2058
Eco130I	CCWWGG	1 cut(s)	231
Eco147I	AGGCCT	1 cut(s)	1196
Eco24I	GRGCYC	3 cut(s)	53, 162, 2060
Eco31I	GGTCTC	1 cut(s)	362
Eco47I	GGWCC	1 cut(s)	235
Eco53kI	GAGCTC	3 cut(s)	51, 160, 2058
Eco57I	CTGAAG	4 cut(s)	539, 1737, 1920, 1941
Eco88I	CYCGRG	2 cut(s)	40, 2328
EcoICRI	GAGCTC	3 cut(s)	51, 160, 2058
EcoO109I	RGGNCCY	1 cut(s)	235
EcoRI	GAATTC	1 cut(s)	995
EcoRII	CCWGG	2 cut(s)	1191, 1543
EcoT14I	CCWWGG	1 cut(s)	231
EcoT22I	ATGCAT	1 cut(s)	778
EcoT38I	GRGCYC	3 cut(s)	53, 162, 2060
ErhI	CCWWGG	1 cut(s)	231
FalI	AAGNNNNNCTT	2 cut(s)	1893, 1925
FauI	CCCGC	1 cut(s)	200
FblI	GTMKAC	2 cut(s)	132, 2072
FokI	GGATG	8 cut(s)	586, 602, 681, 776, 890, 1781, 1799, 1811
FriOI	GRGCYC	3 cut(s)	53, 162, 2060
FspBI	CTAG	3 cut(s)	584, 867, 1643
GlaI	GCGC	2 cut(s)	552, 846
GsuI	CTGGAG	2 cut(s)	176, 1854
HaeII	RGCGCY	1 cut(s)	554
HaeIII	GGCC	8 cut(s)	38, 251, 263, 287, 296, 1196, 1476, 1504
HapII	CCGG	6 cut(s)	23, 101, 201, 247, 284, 637
HgaI	GACGC	1 cut(s)	82
HhaI	GCGC	2 cut(s)	553, 847
Hin6I	GCGC	2 cut(s)	551, 845
HinP1I	GCGC	2 cut(s)	551, 845
HincII	GTYRAC	2 cut(s)	1489, 2073
HindII	GTYRAC	2 cut(s)	1489, 2073
HindIII	AAGCTT	1 cut(s)	2132
HinfI	GANTC	7 cut(s)	186, 343, 544, 1811, 1961, 2032, 2086
HpaI	GTTAAC	1 cut(s)	1489
HpaII	CCGG	6 cut(s)	23, 101, 201, 247, 284, 637
HphI	GGTGA	6 cut(s)	190, 262, 626, 1736, 1772, 2059
Hpy166II	GTNNAC	7 cut(s)	133, 860, 1274, 1325, 1418, 1489, 2073
Hpy188III	TCNNGA	7 cut(s)	70, 1057, 1217, 1550, 1833, 2083, 2328
Hpy8I	GTNNAC	7 cut(s)	133, 860, 1274, 1325, 1418, 1489, 2073
Hpy99I	CGWCG	5 cut(s)	76, 154, 230, 706, 1604
HpyAV	CCTTC	8 cut(s)	98, 286, 1459, 1655, 1965, 1992, 2266, 2278
HpyCH4III	ACNGT	3 cut(s)	226, 1586, 1748
HpyCH4IV	ACGT	2 cut(s)	267, 625
HpySE526I	ACGT	2 cut(s)	267, 625
HspAI	GCGC	2 cut(s)	551, 845
KspAI	GTTAAC	1 cut(s)	1489
Kzo9I	GATC	8 cut(s)	178, 675, 985, 1267, 1363, 1468, 1829, 2122
LguI	GCTCTTC	1 cut(s)	167
LmnI	GCTCC	5 cut(s)	25, 48, 56, 118, 157
LweI	GCATC	8 cut(s)	564, 763, 785, 1210, 1629, 1870, 1885, 2053
MaeI	CTAG	3 cut(s)	584, 867, 1643
MaeII	ACGT	2 cut(s)	267, 625
MaeIII	GTNAC	6 cut(s)	196, 268, 444, 452, 931, 1165
MalI	GATC	8 cut(s)	180, 677, 987, 1269, 1365, 1470, 1831, 2124
MboI	GATC	8 cut(s)	178, 675, 985, 1267, 1363, 1468, 1829, 2122
MfeI	CAATTG	1 cut(s)	290
MflI	RGATCY	3 cut(s)	985, 1363, 1829
MhlI	GDGCHC	6 cut(s)	53, 162, 613, 1276, 1631, 2060
MluI	ACGCGT	1 cut(s)	928
MlyI	GAGTC	3 cut(s)	337, 1955, 2026
MmeI	TCCRAC	3 cut(s)	26, 1276, 2114
Mph1103I	ATGCAT	1 cut(s)	778
MroXI	GAANNNNTTC	1 cut(s)	1010
MslI	CAYNNNNRTG	3 cut(s)	531, 1158, 2392
MspA1I	CMGCKG	1 cut(s)	207
MspI	CCGG	6 cut(s)	23, 101, 201, 247, 284, 637
MspR9I	CCNGG	5 cut(s)	101, 248, 284, 1193, 1545
MunI	CAATTG	1 cut(s)	290
Mva1269I	GAATGC	2 cut(s)	1335, 2078
MvaI	CCWGG	2 cut(s)	1193, 1545
MvnI	CGCG	2 cut(s)	674, 930
NciI	CCSGG	3 cut(s)	101, 248, 284
NdeII	GATC	8 cut(s)	178, 675, 985, 1267, 1363, 1468, 1829, 2122
NheI	GCTAGC	2 cut(s)	866, 1642
NlaIV	GGNNCC	2 cut(s)	27, 1212
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	3 cut(s)	196, 268, 1165
NsiI	ATGCAT	1 cut(s)	778
NspI	RCATGY	3 cut(s)	371, 690, 1487
PaeR7I	CTCGAG	1 cut(s)	2328
PceI	AGGCCT	1 cut(s)	1196
PciI	ACATGT	1 cut(s)	1483
PciSI	GCTCTTC	1 cut(s)	167
PctI	GAATGC	2 cut(s)	1335, 2078
PdmI	GAANNNNTTC	1 cut(s)	1010
PfeI	GAWTC	4 cut(s)	186, 544, 1811, 2086
PflMI	CCANNNNNTGG	1 cut(s)	1207
PleI	GAGTC	3 cut(s)	337, 1955, 2026
PpsI	GAGTC	3 cut(s)	337, 1955, 2026
Ppu21I	YACGTR	1 cut(s)	626
PpuMI	RGGWCCY	1 cut(s)	235
PscI	ACATGT	1 cut(s)	1483
PshBI	ATTAAT	1 cut(s)	822
Psp124BI	GAGCTC	3 cut(s)	53, 162, 2060
Psp5II	RGGWCCY	1 cut(s)	235
Psp6I	CCWGG	2 cut(s)	1191, 1543
PspGI	CCWGG	2 cut(s)	1191, 1543
PspN4I	GGNNCC	2 cut(s)	27, 1212
PspPI	GGNCC	5 cut(s)	235, 249, 262, 286, 295
PspPPI	RGGWCCY	1 cut(s)	235
PstI	CTGCAG	2 cut(s)	897, 1186
PsuI	RGATCY	3 cut(s)	985, 1363, 1829
RsaI	GTAC	6 cut(s)	110, 859, 949, 1033, 1530, 2216
RsaNI	GTAC	6 cut(s)	109, 858, 948, 1032, 1529, 2215
RseI	CAYNNNNRTG	3 cut(s)	531, 1158, 2392
SacI	GAGCTC	3 cut(s)	53, 162, 2060
SalI	GTCGAC	1 cut(s)	2071
SapI	GCTCTTC	1 cut(s)	167
Sau3AI	GATC	8 cut(s)	178, 675, 985, 1267, 1363, 1468, 1829, 2122
Sau96I	GGNCC	5 cut(s)	235, 249, 262, 286, 295
SchI	GAGTC	3 cut(s)	337, 1955, 2026
ScrFI	CCNGG	5 cut(s)	101, 248, 284, 1193, 1545
SduI	GDGCHC	6 cut(s)	53, 162, 613, 1276, 1631, 2060
SfaNI	GCATC	8 cut(s)	564, 763, 785, 1210, 1629, 1870, 1885, 2053
SfcI	CTRYAG	4 cut(s)	578, 893, 1182, 1287
SfiI	GGCCNNNNNGGCC	1 cut(s)	293
Sfr274I	CTCGAG	1 cut(s)	2328
SinI	GGWCC	1 cut(s)	235
SlaI	CTCGAG	1 cut(s)	2328
SmiMI	CAYNNNNRTG	3 cut(s)	531, 1158, 2392
SmlI	CTYRAG	2 cut(s)	375, 2328
SmoI	CTYRAG	2 cut(s)	375, 2328
SseBI	AGGCCT	1 cut(s)	1196
SsiI	CCGC	4 cut(s)	207, 1477, 1689, 1781
SspMI	CTAG	3 cut(s)	584, 867, 1643
SstI	GAGCTC	3 cut(s)	53, 162, 2060
StuI	AGGCCT	1 cut(s)	1196
StyD4I	CCNGG	5 cut(s)	99, 246, 282, 1191, 1543
StyI	CCWWGG	1 cut(s)	231
TaaI	ACNGT	3 cut(s)	226, 1586, 1748
TaiI	ACGT	2 cut(s)	270, 628
TaqI	TCGA	8 cut(s)	704, 779, 953, 1084, 1524, 1964, 2072, 2329
TatI	WGTACW	4 cut(s)	947, 1031, 1528, 2214
TauI	GCSGC	1 cut(s)	1479
TfiI	GAWTC	4 cut(s)	186, 544, 1811, 2086
TscAI	CASTG	6 cut(s)	1174, 1591, 1636, 1657, 1687, 1753
TseFI	GTSAC	3 cut(s)	196, 268, 1165
Tsp45I	GTSAC	3 cut(s)	196, 268, 1165
TspGWI	ACGGA	5 cut(s)	131, 184, 896, 1361, 2356
TspRI	CASTG	6 cut(s)	1174, 1591, 1636, 1657, 1687, 1753
Van91I	CCANNNNNTGG	1 cut(s)	1207
VneI	GTGCAC	1 cut(s)	1272
VpaK11BI	GGWCC	1 cut(s)	235
VspI	ATTAAT	1 cut(s)	822
XapI	RAATTY	5 cut(s)	517, 995, 1256, 1865, 2368
XceI	RCATGY	3 cut(s)	371, 690, 1487
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1939
XhoI	CTCGAG	1 cut(s)	2328
XmiI	GTMKAC	2 cut(s)	132, 2072
XmnI	GAANNNNTTC	1 cut(s)	1010
XspI	CTAG	3 cut(s)	584, 867, 1643
Zsp2I	ATGCAT	1 cut(s)	778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.