Rorug04G0258600

Protein SDA1 homolog

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0002689
Physical Location & Seq
Forward (+)
43155232 .. 43160702
5471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0258600.1

Sequence Viewer

Length: 1515 bp
ATGGAGAATTCGAAAGCGCAGGAGTTTGCTTTGGTCTCCATCTCCGAGCTCGGTTCGTCTTCTCCTTCGTCGCCGGCCGTTGCTAGGTTTAGCGCCGCCGAGAATGGTGTTGCGGAGCTTCGATTTCAGCCGGAGTCTGAGTCGGCCGCTCCCGTCAATGTCGATCTTCAAGCTGCTAAGCTGTACAAGTTGGGCCCCTTGCAGTCTGCTTGCATATCTGAAGGTTCTGATACCGGCAAAGAGAAATTGTATTCAAGGGGCCTCACAATCCAATTTAAAAATGAGGAGGAGAGTGGAGCCTTCCATCATGCATTTGAGCAATGGAAGACAGAGCTTGTTGTTGAAGGAAAATGTTTACCAAATGGAGAGCTAACATCTTCCAAAAGCAAGTTTGATGACAAAATAGAGCCATCTTCTGCCAAAATGTACTTCCATTACTATGGACAATTGCTACATCAACAAAACATGTTACAAGATTATGTGAGGACAGGAACCTATTATGCAGCAGTGATTGAAAACCGTGCAGATTTCACTGGCCGTGTGGTAGTTGATGTTGGTGCCGGTAGTGGTATTCTGTCATTATTTGCTGCTCAGGCTGGTGCAAAGCATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGCAAACTAATTGCTGGGAACCCTTCACTGGGTCAAAGGATAACTGTAATCAAAGGTAAAGTTGAGGAGGTTGAATTACCTGAGAAAGCAGATATACTTATCTCGGAGCCAATGGGCACATTGTTAATTAATGAAAGAATGCTGGAGACCTATGTGATTGCAAGAGATCGGTTTCTTCAGCCAAATGGAAAAATGTTTCCTGGAGTTGGAAGGATACACATGGCACCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCAAATAAGGCTCTCTTCTGGCAGCAACAAAATTATTATGGTGTTGATTTGACGCCCTTGTATGGATCTGCATTCGAAGGATATTTTTCACAGCCTGTCGTTGATGCTTTTGATCCAAGATTATTAGTGGCTCCTTCTTTGTCTCACGTGATAGACTTCAGTAAAATAAAGGAAGAGGACTTGTATGAGTTTGATATACCATTACGGTTTGTAGCTTCTGTAGGCACTAGAGTGCATGGGTTAGCATGCTGGTTCGATGTCTTGTTTGGTGGGAGCACTGTACAAAGGTGGCTTACCACTGCTCCTGGCTCACCAACAACCCATTGGTACCAGTTACGCTGCGTTCTCTCGCAGCCAATTTATGTGATGGCAGGACAAGAAATAACTGGGCGACTCCACATGATTGCCCACAATGCTCAAAGTTATACAATTTATCTCACATTATCAGCTAAAATGTGGGGCCCCGGTGCTGAACAAGGGGGTATAATTCAGTCATCATCATGCAAACTTGATCTTAAAGAGCCCTACTATAGGATGTCGCAGCCACAACCTTATGTAATGGCCCAAGATCAACAACCACATCAGCAATTACACTCACAGGATCTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NUC130_3NT SDA1

Protein Analysis

504

Amino Acids

56.04

Weight (kDa)

5.46

Isoelectric Point (pI)

50.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH_PRMT_N PF25350 7 - 109 2.6e-40 Protein arginine methyltransferase N-terminal PH domain
PrmA PF06325 178 - 252 1.2e-07 Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_25 PF13649 182 - 279 3.3e-07 Methyltransferase domain
PRMT_C PF22528 288 - 442 4e-20 Arginine methyltransferase oligomerization subdomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1233
AccB1I GGYRCC 3 cut(s) 557, 871, 1233
AccBSI CCGCTC 1 cut(s) 149
AciI CCGC 3 cut(s) 96, 113, 147
AclWI GGATC 2 cut(s) 979, 1013
AcoI YGGCCR 3 cut(s) 75, 144, 535
AcsI RAATTY 1 cut(s) 7
AcuI CTGAAG 3 cut(s) 240, 809, 1048
AcvI CACGTG 1 cut(s) 1054
AcyI GRCGYC 1 cut(s) 959
AfaI GTAC 4 cut(s) 185, 428, 1188, 1235
AfiI CCNNNNNNNGG 6 cut(s) 84, 676, 677, 854, 968, 1437
AflIII ACRYGT 1 cut(s) 465
AgsI TTSAA 6 cut(s) 170, 255, 344, 515, 722, 902
AjnI CCWGG 2 cut(s) 847, 1210
AjuI GAANNNNNNNTTGG 2 cut(s) 413, 445
AleI CACNNNNGTG 1 cut(s) 1136
AluBI AGCT 8 cut(s) 49, 118, 173, 181, 334, 370, 1121, 1355
AluI AGCT 8 cut(s) 49, 118, 173, 181, 334, 370, 1121, 1355
Alw21I GWGCWC 2 cut(s) 51, 1184
Alw26I GTCTC 3 cut(s) 40, 788, 1053
AlwI GGATC 2 cut(s) 979, 1013
AoxI GGCC 7 cut(s) 75, 144, 193, 259, 535, 1366, 1467
ApaI GGGCCC 2 cut(s) 197, 1370
ApeKI GCWGC 7 cut(s) 173, 503, 587, 928, 1245, 1258, 1447
ApoI RAATTY 1 cut(s) 7
AseI ATTAAT 1 cut(s) 777
Asp718I GGTACC 1 cut(s) 1233
AspLEI GCGC 2 cut(s) 19, 95
AspS9I GGNCC 6 cut(s) 193, 194, 259, 1366, 1367, 1468
AsuC2I CCSGG 1 cut(s) 1371
AsuHPI GGTGA 1 cut(s) 1209
AsuII TTCGAA 2 cut(s) 11, 981
BaeGI GKGCMC 3 cut(s) 197, 767, 1370
BanI GGYRCC 3 cut(s) 557, 871, 1233
BanII GRGCYC 4 cut(s) 51, 197, 1370, 1431
BbrPI CACGTG 1 cut(s) 1054
BbsI GAAGAC 2 cut(s) 51, 332
Bbv12I GWGCWC 2 cut(s) 51, 1184
BbvI GCAGC 7 cut(s) 160, 515, 574, 940, 1232, 1270, 1459
BccI CCATC 4 cut(s) 47, 312, 418, 1267
BceAI ACGGC 2 cut(s) 62, 522
BciT130I CCWGG 2 cut(s) 849, 1212
BciVI GTATCC 1 cut(s) 855
BcnI CCSGG 1 cut(s) 1371
BcoDI GTCTC 3 cut(s) 40, 788, 1053
BfaI CTAG 3 cut(s) 84, 1134, 1513
BfmI CTRYAG 2 cut(s) 1125, 1435
BfoI RGCGCY 1 cut(s) 96
BfuI GTATCC 1 cut(s) 855
BisI GCNGC 9 cut(s) 96, 147, 174, 504, 588, 929, 1246, 1259, 1448
BlpI GCTNAGC 1 cut(s) 177
BlsI GCNGC 9 cut(s) 97, 148, 175, 505, 589, 930, 1247, 1260, 1449
Bme1390I CCNGG 3 cut(s) 849, 1212, 1371
BmgT120I GGNCC 6 cut(s) 193, 194, 259, 1366, 1367, 1468
BmrFI CCNGG 3 cut(s) 849, 1212, 1371
BmrI ACTGGG 2 cut(s) 686, 1302
BmsI GCATC 2 cut(s) 635, 1000
BmuI ACTGGG 2 cut(s) 686, 1302
BpiI GAAGAC 2 cut(s) 51, 332
BpmI CTGGAG 2 cut(s) 812, 870
Bpu10I CCTNAGC 1 cut(s) 591
Bpu1102I GCTNAGC 1 cut(s) 177
Bpu14I TTCGAA 2 cut(s) 11, 981
BpuMI CCSGG 1 cut(s) 1371
BsaAI YACGTR 1 cut(s) 1054
BsaHI GRCGYC 1 cut(s) 959
BsaI GGTCTC 2 cut(s) 40, 788
BsaJI CCNNGG 1 cut(s) 1369
BsaXI ACNNNNNCTCC 4 cut(s) 125, 155, 1192, 1222
Bsc4I CCNNNNNNNGG 6 cut(s) 84, 676, 677, 854, 968, 1437
Bse118I RCCGGY 3 cut(s) 73, 233, 560
Bse1I ACTGG 4 cut(s) 538, 681, 1237, 1297
Bse3DI GCAATG 1 cut(s) 326
BseBI CCWGG 2 cut(s) 849, 1212
BseDI CCNNGG 1 cut(s) 1369
BseGI GGATG 1 cut(s) 1446
BseLI CCNNNNNNNGG 6 cut(s) 84, 676, 677, 854, 968, 1437
BseMI GCAATG 1 cut(s) 326
BseMII CTCAG 3 cut(s) 129, 605, 720
BseNI ACTGG 4 cut(s) 538, 681, 1237, 1297
BseRI GAGGAG 3 cut(s) 299, 302, 728
BseSI GKGCMC 3 cut(s) 197, 767, 1370
BseX3I CGGCCG 2 cut(s) 75, 144
BseXI GCAGC 7 cut(s) 160, 515, 574, 940, 1232, 1270, 1459
BseYI CCCAGC 1 cut(s) 662
BsgI GTGCAG 1 cut(s) 543
Bsh1285I CGRYCG 2 cut(s) 78, 147
BshFI GGCC 7 cut(s) 77, 146, 195, 261, 537, 1368, 1469
BshNI GGYRCC 3 cut(s) 557, 871, 1233
BsiEI CGRYCG 2 cut(s) 78, 147
BsiHKAI GWGCWC 2 cut(s) 51, 1184
BsiSI CCGG 5 cut(s) 74, 131, 234, 561, 1371
BslI CCNNNNNNNGG 6 cut(s) 84, 676, 677, 854, 968, 1437
BsmAI GTCTC 3 cut(s) 40, 788, 1053
BsmI GAATGC 2 cut(s) 792, 977
BsnI GGCC 7 cut(s) 77, 146, 195, 261, 537, 1368, 1469
Bso31I GGTCTC 2 cut(s) 40, 788
Bsp119I TTCGAA 2 cut(s) 11, 981
Bsp120I GGGCCC 2 cut(s) 193, 1366
Bsp1286I GDGCHC 6 cut(s) 51, 197, 767, 1184, 1370, 1431
Bsp1407I TGTACA 2 cut(s) 183, 1186
Bsp143I GATC 7 cut(s) 163, 814, 971, 1018, 1417, 1474, 1507
Bsp1720I GCTNAGC 1 cut(s) 177
BspACI CCGC 3 cut(s) 96, 113, 147
BspANI GGCC 7 cut(s) 77, 146, 195, 261, 537, 1368, 1469
BspCNI CTCAG 3 cut(s) 130, 604, 721
BspPI GGATC 2 cut(s) 979, 1013
BspT104I TTCGAA 2 cut(s) 11, 981
BspT107I GGYRCC 3 cut(s) 557, 871, 1233
BspTNI GGTCTC 2 cut(s) 40, 788
BsrBI CCGCTC 1 cut(s) 149
BsrDI GCAATG 1 cut(s) 326
BsrFI RCCGGY 3 cut(s) 73, 233, 560
BsrGI TGTACA 2 cut(s) 183, 1186
BsrI ACTGG 4 cut(s) 538, 681, 1237, 1297
BssAI RCCGGY 3 cut(s) 73, 233, 560
BssECI CCNNGG 1 cut(s) 1369
BssMI GATC 7 cut(s) 163, 814, 971, 1018, 1417, 1474, 1507
BssNI GRCGYC 1 cut(s) 959
Bst2UI CCWGG 2 cut(s) 849, 1212
Bst4CI ACNGT 4 cut(s) 521, 694, 1113, 1186
Bst6I CTCTTC 2 cut(s) 926, 1074
BstACI GRCGYC 1 cut(s) 959
BstAPI GCANNNNNTGC 1 cut(s) 644
BstAUI TGTACA 2 cut(s) 183, 1186
BstBAI YACGTR 1 cut(s) 1054
BstBI TTCGAA 2 cut(s) 11, 981
BstC8I GCNNGC 4 cut(s) 75, 211, 649, 1153
BstDEI CTNAG 4 cut(s) 138, 177, 591, 729
BstENI CCTNNNNNAGG 1 cut(s) 1435
BstF5I GGATG 1 cut(s) 1446
BstH2I RGCGCY 1 cut(s) 96
BstHHI GCGC 2 cut(s) 19, 95
BstKTI GATC 7 cut(s) 166, 817, 974, 1021, 1420, 1477, 1510
BstMAI GTCTC 3 cut(s) 40, 788, 1053
BstMBI GATC 7 cut(s) 163, 814, 971, 1018, 1417, 1474, 1507
BstMCI CGRYCG 2 cut(s) 78, 147
BstMWI GCNNNNNNNGC 5 cut(s) 593, 623, 644, 914, 1319
BstNI CCWGG 2 cut(s) 849, 1212
BstNSI RCATGY 3 cut(s) 469, 611, 1155
BstSCI CCNGG 3 cut(s) 847, 1210, 1369
BstSFI CTRYAG 2 cut(s) 1125, 1435
BstSLI GKGCMC 3 cut(s) 197, 767, 1370
BstV1I GCAGC 7 cut(s) 160, 515, 574, 940, 1232, 1270, 1459
BstV2I GAAGAC 2 cut(s) 51, 332
BstX2I RGATCY 2 cut(s) 971, 1507
BstXI CCANNNNNNTGG 1 cut(s) 440
BstYI RGATCY 2 cut(s) 971, 1507
BstZI CGGCCG 2 cut(s) 75, 144
BsuI GTATCC 1 cut(s) 855
BsuRI GGCC 7 cut(s) 77, 146, 195, 261, 537, 1368, 1469
BtsCI GGATG 1 cut(s) 1446
BtsI GCAGTG 2 cut(s) 513, 1203
BtsIMutI CAGTG 6 cut(s) 513, 531, 674, 886, 1182, 1203
Cac8I GCNNGC 4 cut(s) 75, 211, 649, 1153
CfoI GCGC 2 cut(s) 19, 95
Cfr10I RCCGGY 3 cut(s) 73, 233, 560
Cfr13I GGNCC 6 cut(s) 193, 194, 259, 1366, 1367, 1468
CseI GACGC 1 cut(s) 967
Csp6I GTAC 4 cut(s) 184, 427, 1187, 1234
CviAII CATG 8 cut(s) 308, 466, 608, 868, 1142, 1152, 1306, 1407
CviQI GTAC 4 cut(s) 184, 427, 1187, 1234
DdeI CTNAG 4 cut(s) 138, 177, 591, 729
DpnI GATC 7 cut(s) 165, 816, 973, 1020, 1419, 1476, 1509
DpnII GATC 7 cut(s) 163, 814, 971, 1018, 1417, 1474, 1507
DraI TTTAAA 1 cut(s) 277
EaeI YGGCCR 3 cut(s) 75, 144, 535
EagI CGGCCG 2 cut(s) 75, 144
Eam1104I CTCTTC 2 cut(s) 926, 1074
EarI CTCTTC 2 cut(s) 926, 1074
Ecl136II GAGCTC 1 cut(s) 49
EclXI CGGCCG 2 cut(s) 75, 144
Eco24I GRGCYC 4 cut(s) 51, 197, 1370, 1431
Eco31I GGTCTC 2 cut(s) 40, 788
Eco52I CGGCCG 2 cut(s) 75, 144
Eco53kI GAGCTC 1 cut(s) 49
Eco57I CTGAAG 3 cut(s) 240, 809, 1048
Eco72I CACGTG 1 cut(s) 1054
EcoICRI GAGCTC 1 cut(s) 49
EcoNI CCTNNNNNAGG 1 cut(s) 1435
EcoO109I RGGNCCY 4 cut(s) 194, 259, 1366, 1367
EcoRI GAATTC 1 cut(s) 7
EcoRII CCWGG 2 cut(s) 847, 1210
EcoT22I ATGCAT 1 cut(s) 313
EcoT38I GRGCYC 4 cut(s) 51, 197, 1370, 1431
FaeI CATG 8 cut(s) 311, 469, 611, 871, 1145, 1155, 1309, 1410
FalI AAGNNNNNCTT 2 cut(s) 905, 937
FatI CATG 8 cut(s) 307, 465, 607, 867, 1141, 1151, 1305, 1406
Fnu4HI GCNGC 9 cut(s) 96, 147, 174, 504, 588, 929, 1246, 1259, 1448
FokI GGATG 1 cut(s) 1453
FriOI GRGCYC 4 cut(s) 51, 197, 1370, 1431
Fsp4HI GCNGC 9 cut(s) 96, 147, 174, 504, 588, 929, 1246, 1259, 1448
FspBI CTAG 3 cut(s) 84, 1134, 1513
GlaI GCGC 2 cut(s) 18, 94
GluI GCNGC 9 cut(s) 96, 147, 174, 504, 588, 929, 1246, 1259, 1448
GsaI CCCAGC 1 cut(s) 666
GsuI CTGGAG 2 cut(s) 812, 870
HaeII RGCGCY 1 cut(s) 96
HaeIII GGCC 7 cut(s) 77, 146, 195, 261, 537, 1368, 1469
HapII CCGG 5 cut(s) 74, 131, 234, 561, 1371
HgaI GACGC 1 cut(s) 967
HhaI GCGC 2 cut(s) 19, 95
Hin1I GRCGYC 1 cut(s) 959
Hin1II CATG 8 cut(s) 311, 469, 611, 871, 1145, 1155, 1309, 1410
Hin6I GCGC 2 cut(s) 17, 93
HinP1I GCGC 2 cut(s) 17, 93
HinfI GANTC 3 cut(s) 134, 140, 1299
HpaII CCGG 5 cut(s) 74, 131, 234, 561, 1371
HphI GGTGA 1 cut(s) 1209
Hpy166II GTNNAC 1 cut(s) 356
Hpy188I TCNGA 6 cut(s) 46, 139, 220, 229, 631, 754
Hpy8I GTNNAC 1 cut(s) 356
Hpy99I CGWCG 1 cut(s) 73
HpyAV CCTTC 8 cut(s) 75, 215, 310, 338, 681, 852, 977, 1050
HpyCH4III ACNGT 4 cut(s) 521, 694, 1113, 1186
HpyCH4IV ACGT 1 cut(s) 1053
HpyF10VI GCNNNNNNNGC 5 cut(s) 593, 623, 644, 914, 1319
HpyF3I CTNAG 4 cut(s) 138, 177, 591, 729
HpySE526I ACGT 1 cut(s) 1053
Hsp92I GRCGYC 1 cut(s) 959
Hsp92II CATG 8 cut(s) 311, 469, 611, 871, 1145, 1155, 1309, 1410
HspAI GCGC 2 cut(s) 17, 93
KpnI GGTACC 1 cut(s) 1237
KroI GCCGGC 1 cut(s) 73
KroNI GCCGGC 1 cut(s) 75
Kzo9I GATC 7 cut(s) 163, 814, 971, 1018, 1417, 1474, 1507
LmnI GCTCC 7 cut(s) 115, 154, 296, 754, 1042, 1179, 1213
Lsp1109I GCAGC 7 cut(s) 160, 515, 574, 940, 1232, 1270, 1459
LweI GCATC 2 cut(s) 635, 1000
MaeI CTAG 3 cut(s) 84, 1134, 1513
MaeII ACGT 1 cut(s) 1053
MaeIII GTNAC 2 cut(s) 468, 1239
MalI GATC 7 cut(s) 165, 816, 973, 1020, 1419, 1476, 1509
MbiI CCGCTC 1 cut(s) 149
MboI GATC 7 cut(s) 163, 814, 971, 1018, 1417, 1474, 1507
MboII GAAGA 8 cut(s) 51, 158, 337, 369, 405, 815, 913, 1091
MfeI CAATTG 1 cut(s) 446
MflI RGATCY 2 cut(s) 971, 1507
MhlI GDGCHC 6 cut(s) 51, 197, 767, 1184, 1370, 1431
MlyI GAGTC 3 cut(s) 143, 149, 1293
MmeI TCCRAC 1 cut(s) 835
MnlI CCTC 7 cut(s) 272, 277, 280, 477, 706, 709, 1075
Mph1103I ATGCAT 1 cut(s) 313
MroNI GCCGGC 1 cut(s) 73
MseI TTAA 4 cut(s) 276, 773, 777, 1422
MslI CAYNNNNRTG 4 cut(s) 438, 612, 1136, 1405
MspI CCGG 5 cut(s) 74, 131, 234, 561, 1371
MspR9I CCNGG 3 cut(s) 849, 1212, 1371
MunI CAATTG 1 cut(s) 446
Mva1269I GAATGC 2 cut(s) 792, 977
MvaI CCWGG 2 cut(s) 849, 1212
MwoI GCNNNNNNNGC 5 cut(s) 593, 623, 644, 914, 1319
NaeI GCCGGC 1 cut(s) 75
NciI CCSGG 1 cut(s) 1371
NdeII GATC 7 cut(s) 163, 814, 971, 1018, 1417, 1474, 1507
NgoMIV GCCGGC 1 cut(s) 73
NlaIII CATG 8 cut(s) 311, 469, 611, 871, 1145, 1155, 1309, 1410
NmeAIII GCCGAG 1 cut(s) 124
NsiI ATGCAT 1 cut(s) 313
NspI RCATGY 3 cut(s) 469, 611, 1155
NspV TTCGAA 2 cut(s) 11, 981
OliI CACNNNNGTG 1 cut(s) 1136
PacI TTAATTAA 1 cut(s) 777
PaeI GCATGC 1 cut(s) 1155
PciI ACATGT 1 cut(s) 465
PctI GAATGC 2 cut(s) 792, 977
PdiI GCCGGC 1 cut(s) 75
PfoI TCCNGGA 1 cut(s) 847
PkrI GCNGC 9 cut(s) 97, 148, 175, 505, 589, 930, 1247, 1260, 1449
PleI GAGTC 3 cut(s) 142, 148, 1293
PmaCI CACGTG 1 cut(s) 1054
PmlI CACGTG 1 cut(s) 1054
PpsI GAGTC 3 cut(s) 142, 148, 1293
Ppu21I YACGTR 1 cut(s) 1054
PscI ACATGT 1 cut(s) 465
PshBI ATTAAT 1 cut(s) 777
Psp124BI GAGCTC 1 cut(s) 51
Psp6I CCWGG 2 cut(s) 847, 1210
PspCI CACGTG 1 cut(s) 1054
PspFI CCCAGC 1 cut(s) 662
PspGI CCWGG 2 cut(s) 847, 1210
PspOMI GGGCCC 2 cut(s) 193, 1366
PspPI GGNCC 6 cut(s) 193, 194, 259, 1366, 1367, 1468
PsuI RGATCY 2 cut(s) 971, 1507
RsaI GTAC 4 cut(s) 185, 428, 1188, 1235
RsaNI GTAC 4 cut(s) 184, 427, 1187, 1234
RseI CAYNNNNRTG 4 cut(s) 438, 612, 1136, 1405
SacI GAGCTC 1 cut(s) 51
SaqAI TTAA 4 cut(s) 276, 773, 777, 1422
SatI GCNGC 9 cut(s) 96, 147, 174, 504, 588, 929, 1246, 1259, 1448
Sau3AI GATC 7 cut(s) 163, 814, 971, 1018, 1417, 1474, 1507
Sau96I GGNCC 6 cut(s) 193, 194, 259, 1366, 1367, 1468
SchI GAGTC 3 cut(s) 143, 149, 1293
ScrFI CCNGG 3 cut(s) 849, 1212, 1371
SduI GDGCHC 6 cut(s) 51, 197, 767, 1184, 1370, 1431
SfaNI GCATC 2 cut(s) 635, 1000
SfcI CTRYAG 2 cut(s) 1125, 1435
SfuI TTCGAA 2 cut(s) 11, 981
SmiMI CAYNNNNRTG 4 cut(s) 438, 612, 1136, 1405
SphI GCATGC 1 cut(s) 1155
SsiI CCGC 3 cut(s) 96, 113, 147
SspI AATATT 1 cut(s) 890
SspMI CTAG 3 cut(s) 84, 1134, 1513
SstI GAGCTC 1 cut(s) 51
StyD4I CCNGG 3 cut(s) 847, 1210, 1369
TaaI ACNGT 4 cut(s) 521, 694, 1113, 1186
TaiI ACGT 1 cut(s) 1056
TaqI TCGA 5 cut(s) 11, 121, 162, 981, 1161
TatI WGTACW 3 cut(s) 183, 426, 1186
TauI GCSGC 2 cut(s) 98, 149
Tru1I TTAA 4 cut(s) 276, 773, 777, 1422
Tru9I TTAA 4 cut(s) 276, 773, 777, 1422
TscAI CASTG 6 cut(s) 513, 538, 681, 886, 1189, 1210
TseI GCWGC 7 cut(s) 173, 503, 587, 928, 1245, 1258, 1447
TspDTI ATGAA 2 cut(s) 795, 900
TspRI CASTG 6 cut(s) 513, 538, 681, 886, 1189, 1210
VspI ATTAAT 1 cut(s) 777
XagI CCTNNNNNAGG 1 cut(s) 1435
XapI RAATTY 1 cut(s) 7
XceI RCATGY 3 cut(s) 469, 611, 1155
XcmI CCANNNNNNNNNTGG 1 cut(s) 1227
XspI CTAG 3 cut(s) 84, 1134, 1513
Zsp2I ATGCAT 1 cut(s) 313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.