No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g12080 FvH4_3g27050 FvH4_4g08921 FvH4_5g28372 |
| rosa_chinensis | RchiOBHm_Chr1g0349481 RchiOBHm_Chr1g0374471 RchiOBHm_Chr5g0079741 |
| rosa_laevigata | RLG00000017976 |
| rosa_roxburghii | Rroxscaffold_3G00244850 |
| rosa_rugosa | Rorug04G0258600 |
| rosa_samantha | Rh1AG409300 Rh1AG410000 Rh1AG410700 Rh1BG371600 Rh1CG384300 Rh1CG385300 Rh1DG401200 Rh1DG402300 Rh2AG244300 Rh2AG246200 Rh2AG314700 Rh2AG497800 Rh2BG107600 Rh2CG109400 Rh2CG333100 Rh2CG483800 Rh2DG253100 Rh2DG254400 Rh2DG403900 Rh2DG603400 Rh4AG011800 Rh4DG085100 Rh4DG137800 Rh5AG127700 Rh5AG128200 Rh5BG534800 Rh6AG131600 Rh6BG257800 Rh7BG020500 Rh7CG030700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 149 |
| AciI | CCGC | 1 cut(s) | 149 |
| AcsI | RAATTY | 1 cut(s) | 153 |
| AgsI | TTSAA | 1 cut(s) | 279 |
| AjiI | CACGTC | 1 cut(s) | 170 |
| AjnI | CCWGG | 1 cut(s) | 51 |
| ApoI | RAATTY | 1 cut(s) | 153 |
| BbsI | GAAGAC | 1 cut(s) | 54 |
| BccI | CCATC | 1 cut(s) | 72 |
| BciT130I | CCWGG | 1 cut(s) | 53 |
| BclI | TGATCA | 1 cut(s) | 324 |
| Bme1390I | CCNGG | 1 cut(s) | 53 |
| BmgBI | CACGTC | 1 cut(s) | 170 |
| BmrFI | CCNGG | 1 cut(s) | 53 |
| BpiI | GAAGAC | 1 cut(s) | 54 |
| BsaJI | CCNNGG | 1 cut(s) | 52 |
| Bse3DI | GCAATG | 1 cut(s) | 237 |
| BseBI | CCWGG | 1 cut(s) | 53 |
| BseDI | CCNNGG | 1 cut(s) | 52 |
| BseGI | GGATG | 1 cut(s) | 260 |
| BseMI | GCAATG | 1 cut(s) | 237 |
| BseMII | CTCAG | 1 cut(s) | 239 |
| Bsp143I | GATC | 1 cut(s) | 324 |
| BspACI | CCGC | 1 cut(s) | 149 |
| BspCNI | CTCAG | 1 cut(s) | 240 |
| BsrBI | CCGCTC | 1 cut(s) | 149 |
| BsrDI | GCAATG | 1 cut(s) | 237 |
| BssECI | CCNNGG | 1 cut(s) | 52 |
| BssMI | GATC | 1 cut(s) | 324 |
| Bst2UI | CCWGG | 1 cut(s) | 53 |
| Bst4CI | ACNGT | 2 cut(s) | 126, 239 |
| BstDEI | CTNAG | 1 cut(s) | 248 |
| BstF5I | GGATG | 1 cut(s) | 260 |
| BstKTI | GATC | 1 cut(s) | 327 |
| BstMBI | GATC | 1 cut(s) | 324 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 80 |
| BstNI | CCWGG | 1 cut(s) | 53 |
| BstSCI | CCNGG | 1 cut(s) | 51 |
| BstV2I | GAAGAC | 1 cut(s) | 54 |
| BtrI | CACGTC | 1 cut(s) | 170 |
| BtsCI | GGATG | 1 cut(s) | 260 |
| BtsI | GCAGTG | 1 cut(s) | 98 |
| BtsIMutI | CAGTG | 1 cut(s) | 98 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 204, 239 |
| CviAII | CATG | 1 cut(s) | 71 |
| CviJI | RGCY | 2 cut(s) | 83, 161 |
| CviKI_1 | RGCY | 2 cut(s) | 83, 161 |
| DdeI | CTNAG | 1 cut(s) | 248 |
| DpnI | GATC | 1 cut(s) | 326 |
| DpnII | GATC | 1 cut(s) | 324 |
| EcoRII | CCWGG | 1 cut(s) | 51 |
| EcoT22I | ATGCAT | 1 cut(s) | 76 |
| FaeI | CATG | 1 cut(s) | 74 |
| FaiI | YATR | 6 cut(s) | 72, 290, 292, 294, 348, 350 |
| FatI | CATG | 1 cut(s) | 70 |
| FauNDI | CATATG | 1 cut(s) | 348 |
| FbaI | TGATCA | 1 cut(s) | 324 |
| FokI | GGATG | 1 cut(s) | 267 |
| Hin1II | CATG | 1 cut(s) | 74 |
| HinfI | GANTC | 1 cut(s) | 4 |
| Hpy188I | TCNGA | 2 cut(s) | 183, 262 |
| HpyAV | CCTTC | 1 cut(s) | 18 |
| HpyCH4III | ACNGT | 2 cut(s) | 126, 239 |
| HpyCH4IV | ACGT | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 2 cut(s) | 74, 346 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 80 |
| HpyF3I | CTNAG | 1 cut(s) | 248 |
| HpySE526I | ACGT | 1 cut(s) | 169 |
| Hsp92II | CATG | 1 cut(s) | 74 |
| Ksp22I | TGATCA | 1 cut(s) | 324 |
| Kzo9I | GATC | 1 cut(s) | 324 |
| LmnI | GCTCC | 1 cut(s) | 146 |
| LpnPI | CCDG | 2 cut(s) | 38, 65 |
| MaeII | ACGT | 1 cut(s) | 169 |
| MaeIII | GTNAC | 3 cut(s) | 56, 211, 239 |
| MalI | GATC | 1 cut(s) | 326 |
| MbiI | CCGCTC | 1 cut(s) | 149 |
| MboI | GATC | 1 cut(s) | 324 |
| MboII | GAAGA | 4 cut(s) | 59, 59, 129, 267 |
| MluCI | AATT | 3 cut(s) | 153, 307, 319 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MnlI | CCTC | 2 cut(s) | 73, 111 |
| Mph1103I | ATGCAT | 1 cut(s) | 76 |
| MslI | CAYNNNNRTG | 1 cut(s) | 69 |
| MspR9I | CCNGG | 1 cut(s) | 53 |
| MvaI | CCWGG | 1 cut(s) | 53 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 80 |
| NdeI | CATATG | 1 cut(s) | 348 |
| NdeII | GATC | 1 cut(s) | 324 |
| NlaIII | CATG | 1 cut(s) | 74 |
| NsiI | ATGCAT | 1 cut(s) | 76 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| Psp6I | CCWGG | 1 cut(s) | 51 |
| PspGI | CCWGG | 1 cut(s) | 51 |
| RseI | CAYNNNNRTG | 1 cut(s) | 69 |
| Sau3AI | GATC | 1 cut(s) | 324 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 1 cut(s) | 53 |
| SetI | ASST | 1 cut(s) | 172 |
| SgeI | CNNG | 7 cut(s) | 64, 65, 83, 155, 182, 219, 233 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 69 |
| Sse9I | AATT | 3 cut(s) | 153, 307, 319 |
| SsiI | CCGC | 1 cut(s) | 149 |
| SspI | AATATT | 1 cut(s) | 337 |
| StyD4I | CCNGG | 1 cut(s) | 51 |
| TaaI | ACNGT | 2 cut(s) | 126, 239 |
| TaiI | ACGT | 1 cut(s) | 172 |
| TasI | AATT | 3 cut(s) | 153, 307, 319 |
| TscAI | CASTG | 1 cut(s) | 98 |
| TspDTI | ATGAA | 3 cut(s) | 12, 59, 60 |
| TspRI | CASTG | 1 cut(s) | 98 |
| XapI | RAATTY | 1 cut(s) | 153 |
| Zsp2I | ATGCAT | 1 cut(s) | 76 |