Rh2CG483800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
64979565 .. 64979879
315 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG483800.1

Sequence Viewer

Length: 315 bp
ATGCGGTGTACAGTGCAGGGACACGCTCAGCTTCATGCATTGGAGGCTGAAAGGCAGCGTAGAAATAATCGTCAAAGAGAGAGACGACGATTATTGAGTTCTTCGCAACAAGAAGAAAGTTTAGCCCAAAGACGTGCCAATTATCAAAGACAACAGCAAATGGAGGCCACAAGTGTATCAAATCAAGTGGAAGCAATGGCCGGTAACTTACTGAGTGCATGTTCTGAAATACAAACATCTTCAACGTATTGTATATGTGTTTTGCACAATTTTCTTTCTACTTTCATGAACAAAAATATTATTCTATATATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

104

Amino Acids

12.09

Weight (kDa)

9.49

Isoelectric Point (pI)

81.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 4
AcoI YGGCCR 1 cut(s) 198
AfaI GTAC 1 cut(s) 10
AgsI TTSAA 1 cut(s) 243
AjiI CACGTC 1 cut(s) 134
AluBI AGCT 1 cut(s) 31
AluI AGCT 1 cut(s) 31
Alw26I GTCTC 1 cut(s) 76
AoxI GGCC 2 cut(s) 165, 198
ApeKI GCWGC 1 cut(s) 55
BaeI ACNNNNGTAYC 2 cut(s) 159, 192
BbvI GCAGC 1 cut(s) 67
BcoDI GTCTC 1 cut(s) 76
BisI GCNGC 1 cut(s) 56
BlpI GCTNAGC 1 cut(s) 27
BlsI GCNGC 1 cut(s) 57
BmgBI CACGTC 1 cut(s) 134
Bpu1102I GCTNAGC 1 cut(s) 27
Bse118I RCCGGY 1 cut(s) 200
Bse3DI GCAATG 1 cut(s) 201
BseMI GCAATG 1 cut(s) 201
BseMII CTCAG 2 cut(s) 41, 203
BseXI GCAGC 1 cut(s) 67
BsgI GTGCAG 1 cut(s) 35
BshFI GGCC 2 cut(s) 167, 200
BsiSI CCGG 1 cut(s) 201
BslFI GGGAC 1 cut(s) 33
BsmAI GTCTC 1 cut(s) 76
BsmBI CGTCTC 1 cut(s) 76
BsmFI GGGAC 1 cut(s) 33
BsnI GGCC 2 cut(s) 167, 200
Bsp1407I TGTACA 1 cut(s) 8
Bsp1720I GCTNAGC 1 cut(s) 27
BspACI CCGC 1 cut(s) 4
BspANI GGCC 2 cut(s) 167, 200
BspCNI CTCAG 2 cut(s) 40, 204
BspHI TCATGA 1 cut(s) 285
BsrDI GCAATG 1 cut(s) 201
BsrFI RCCGGY 1 cut(s) 200
BsrGI TGTACA 1 cut(s) 8
BssAI RCCGGY 1 cut(s) 200
Bst4CI ACNGT 1 cut(s) 13
BstAUI TGTACA 1 cut(s) 8
BstDEI CTNAG 2 cut(s) 27, 212
BstMAI GTCTC 1 cut(s) 76
BstMWI GCNNNNNNNGC 1 cut(s) 44
BstNSI RCATGY 1 cut(s) 222
BstV1I GCAGC 1 cut(s) 67
BsuRI GGCC 2 cut(s) 167, 200
BtrI CACGTC 1 cut(s) 134
BtsIMutI CAGTG 1 cut(s) 18
CciI TCATGA 1 cut(s) 285
Cfr10I RCCGGY 1 cut(s) 200
Csp6I GTAC 1 cut(s) 9
CspCI CAANNNNNGTGG 2 cut(s) 168, 203
CviAII CATG 3 cut(s) 35, 219, 286
CviJI RGCY 5 cut(s) 31, 47, 125, 167, 200
CviKI_1 RGCY 5 cut(s) 31, 47, 125, 167, 200
CviQI GTAC 1 cut(s) 9
DdeI CTNAG 2 cut(s) 27, 212
EaeI YGGCCR 1 cut(s) 198
EcoT22I ATGCAT 1 cut(s) 40
Esp3I CGTCTC 1 cut(s) 76
FaeI CATG 3 cut(s) 38, 222, 289
FaiI YATR 8 cut(s) 36, 220, 254, 256, 287, 307, 309, 311
FaqI GGGAC 1 cut(s) 33
FatI CATG 3 cut(s) 34, 218, 285
Fnu4HI GCNGC 1 cut(s) 56
Fsp4HI GCNGC 1 cut(s) 56
GluI GCNGC 1 cut(s) 56
HaeIII GGCC 2 cut(s) 167, 200
HapII CCGG 1 cut(s) 201
Hin1II CATG 3 cut(s) 38, 222, 289
HpaII CCGG 1 cut(s) 201
Hpy166II GTNNAC 1 cut(s) 9
Hpy188I TCNGA 1 cut(s) 226
Hpy188III TCNNGA 1 cut(s) 286
Hpy8I GTNNAC 1 cut(s) 9
Hpy99I CGWCG 1 cut(s) 90
HpyCH4III ACNGT 1 cut(s) 13
HpyCH4IV ACGT 2 cut(s) 133, 245
HpyCH4V TGCA 4 cut(s) 16, 38, 218, 265
HpyF10VI GCNNNNNNNGC 1 cut(s) 44
HpyF3I CTNAG 2 cut(s) 27, 212
HpySE526I ACGT 2 cut(s) 133, 245
Hsp92II CATG 3 cut(s) 38, 222, 289
LpnPI CCDG 2 cut(s) 2, 214
Lsp1109I GCAGC 1 cut(s) 67
MaeII ACGT 2 cut(s) 133, 245
MaeIII GTNAC 1 cut(s) 203
MboII GAAGA 3 cut(s) 93, 125, 231
MluCI AATT 2 cut(s) 139, 268
MnlI CCTC 2 cut(s) 37, 157
Mph1103I ATGCAT 1 cut(s) 40
MspI CCGG 1 cut(s) 201
MwoI GCNNNNNNNGC 1 cut(s) 44
NlaIII CATG 3 cut(s) 38, 222, 289
NsiI ATGCAT 1 cut(s) 40
NspI RCATGY 1 cut(s) 222
PagI TCATGA 1 cut(s) 285
PkrI GCNGC 1 cut(s) 57
RsaI GTAC 1 cut(s) 10
RsaNI GTAC 1 cut(s) 9
SatI GCNGC 1 cut(s) 56
SetI ASST 3 cut(s) 33, 136, 248
Sse9I AATT 2 cut(s) 139, 268
SsiI CCGC 1 cut(s) 4
SspI AATATT 1 cut(s) 298
TaaI ACNGT 1 cut(s) 13
TaiI ACGT 2 cut(s) 136, 248
TasI AATT 2 cut(s) 139, 268
TatI WGTACW 1 cut(s) 8
TscAI CASTG 1 cut(s) 18
TseI GCWGC 1 cut(s) 55
TspDTI ATGAA 3 cut(s) 23, 274, 302
TspRI CASTG 1 cut(s) 18
XceI RCATGY 1 cut(s) 222
Zsp2I ATGCAT 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.