protease
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g12080 FvH4_3g27050 FvH4_4g08921 FvH4_5g28372 |
| rosa_chinensis | RchiOBHm_Chr1g0349481 RchiOBHm_Chr1g0374471 RchiOBHm_Chr5g0079741 |
| rosa_laevigata | RLG00000017976 |
| rosa_roxburghii | Rroxscaffold_3G00244850 |
| rosa_rugosa | Rorug04G0258600 |
| rosa_samantha | Rh1AG409300 Rh1AG410000 Rh1AG410700 Rh1BG371600 Rh1CG384300 Rh1CG385300 Rh1DG401200 Rh1DG402300 Rh2AG244300 Rh2AG246200 Rh2AG314700 Rh2AG497800 Rh2BG107600 Rh2CG109400 Rh2CG333100 Rh2CG483800 Rh2DG253100 Rh2DG254400 Rh2DG403900 Rh2DG603400 Rh4AG011800 Rh4DG085100 Rh4DG137800 Rh5AG127700 Rh5AG128200 Rh5BG534800 Rh6AG131600 Rh6BG257800 Rh7BG020500 Rh7CG030700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 112 |
| AluBI | AGCT | 2 cut(s) | 86, 143 |
| AluI | AGCT | 2 cut(s) | 86, 143 |
| ApeKI | GCWGC | 2 cut(s) | 140, 190 |
| ApoI | RAATTY | 1 cut(s) | 112 |
| BbsI | GAAGAC | 1 cut(s) | 79 |
| BbvI | GCAGC | 1 cut(s) | 152 |
| BfaI | CTAG | 1 cut(s) | 77 |
| BisI | GCNGC | 2 cut(s) | 141, 191 |
| BlsI | GCNGC | 2 cut(s) | 142, 192 |
| BmiI | GGNNCC | 1 cut(s) | 44 |
| BmsI | GCATC | 1 cut(s) | 71 |
| BpiI | GAAGAC | 1 cut(s) | 79 |
| Bsa29I | ATCGAT | 1 cut(s) | 65 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 34 |
| BseCI | ATCGAT | 1 cut(s) | 65 |
| BseRI | GAGGAG | 1 cut(s) | 9 |
| BseXI | GCAGC | 1 cut(s) | 152 |
| BsgI | GTGCAG | 1 cut(s) | 90 |
| Bsh1285I | CGRYCG | 1 cut(s) | 69 |
| BshVI | ATCGAT | 1 cut(s) | 65 |
| BsiEI | CGRYCG | 1 cut(s) | 69 |
| Bsp143I | GATC | 1 cut(s) | 66 |
| BspDI | ATCGAT | 1 cut(s) | 65 |
| BspLI | GGNNCC | 1 cut(s) | 44 |
| BssMI | GATC | 1 cut(s) | 66 |
| Bst4CI | ACNGT | 1 cut(s) | 163 |
| BstDEI | CTNAG | 1 cut(s) | 99 |
| BstKTI | GATC | 1 cut(s) | 69 |
| BstMBI | GATC | 1 cut(s) | 66 |
| BstMCI | CGRYCG | 1 cut(s) | 69 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 104 |
| BstV1I | GCAGC | 1 cut(s) | 152 |
| BstV2I | GAAGAC | 1 cut(s) | 79 |
| Bsu15I | ATCGAT | 1 cut(s) | 65 |
| BsuTUI | ATCGAT | 1 cut(s) | 65 |
| ClaI | ATCGAT | 1 cut(s) | 65 |
| CviJI | RGCY | 3 cut(s) | 86, 143, 193 |
| CviKI_1 | RGCY | 3 cut(s) | 86, 143, 193 |
| DdeI | CTNAG | 1 cut(s) | 99 |
| DpnI | GATC | 1 cut(s) | 68 |
| DpnII | GATC | 1 cut(s) | 66 |
| EcoRI | GAATTC | 1 cut(s) | 112 |
| FaiI | YATR | 5 cut(s) | 32, 118, 120, 167, 196 |
| Fnu4HI | GCNGC | 2 cut(s) | 141, 191 |
| Fsp4HI | GCNGC | 2 cut(s) | 141, 191 |
| FspBI | CTAG | 1 cut(s) | 77 |
| GluI | GCNGC | 2 cut(s) | 141, 191 |
| Hpy188I | TCNGA | 1 cut(s) | 71 |
| Hpy188III | TCNNGA | 1 cut(s) | 131 |
| HpyCH4III | ACNGT | 1 cut(s) | 163 |
| HpyCH4V | TGCA | 3 cut(s) | 62, 107, 190 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 104 |
| HpyF3I | CTNAG | 1 cut(s) | 99 |
| Kzo9I | GATC | 1 cut(s) | 66 |
| LpnPI | CCDG | 3 cut(s) | 42, 59, 116 |
| Lsp1109I | GCAGC | 1 cut(s) | 152 |
| LweI | GCATC | 1 cut(s) | 71 |
| MaeI | CTAG | 1 cut(s) | 77 |
| MalI | GATC | 1 cut(s) | 68 |
| MboI | GATC | 1 cut(s) | 66 |
| MboII | GAAGA | 2 cut(s) | 84, 138 |
| MluCI | AATT | 2 cut(s) | 112, 125 |
| MnlI | CCTC | 2 cut(s) | 30, 73 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 104 |
| NdeII | GATC | 1 cut(s) | 66 |
| NlaIV | GGNNCC | 1 cut(s) | 44 |
| PkrI | GCNGC | 2 cut(s) | 142, 192 |
| Ple19I | CGATCG | 1 cut(s) | 69 |
| PspN4I | GGNNCC | 1 cut(s) | 44 |
| PvuI | CGATCG | 1 cut(s) | 69 |
| SatI | GCNGC | 2 cut(s) | 141, 191 |
| Sau3AI | GATC | 1 cut(s) | 66 |
| SetI | ASST | 3 cut(s) | 39, 88, 145 |
| SfaNI | GCATC | 1 cut(s) | 71 |
| SgeI | CNNG | 5 cut(s) | 58, 69, 89, 143, 148 |
| Sse9I | AATT | 2 cut(s) | 112, 125 |
| SspMI | CTAG | 1 cut(s) | 77 |
| TaaI | ACNGT | 1 cut(s) | 163 |
| TaqI | TCGA | 1 cut(s) | 65 |
| TasI | AATT | 2 cut(s) | 112, 125 |
| TseI | GCWGC | 2 cut(s) | 140, 190 |
| TspDTI | ATGAA | 1 cut(s) | 105 |
| XapI | RAATTY | 1 cut(s) | 112 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 53 |
| XspI | CTAG | 1 cut(s) | 77 |