Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0004693

Physical Location & Seq

Genomic Coordinates Reverse (-)

42964930 .. 42969748

Gene Structure 4819 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000003004

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1992 bp

ATGAGTTCCCACTACATGACGCCGGAGCCACTCTCGGCCTCGGGTCGGAGCTCCGAGAAGATGAGTCTGCCGACACTTCAATCCAAGATGAAGTGCGACCCGGAAGGCTACGAGACGGAGCTCCTCCTTGTGTACAACCAATTCAAGTCGTCGCTGGAGCTCTTCAAGCAACAAGCCGATCTCGGATTCAAGTCCGTCACCGGCAGCGGCGGCAGCGACCCCACCGTGGCCAAGGACCTCGCCGACCGGGCATTGTTTCTCGCCCACGTCACCCCCTTTTACCTGGCCCAATTGGCCCAATTCCCCTCACAGCTCTCCGAGTTTCTGCACTCCTCCGCCCGAACGCTTCCCTCTGGTCTCAGATTGCATGTTGCGCAAGCTCTCATTCTTCTTATGAACAGAAAGGCGCACCATAAGGGTACACTTGCTAGCAAGAAGAAAAAGAAAGCAAAACTGCAGCGTGCCATCCGTAGCCTGAAAAAACAGCAACGCGTAACATCAGAAAAAAGTACTTCAAATTATCATACGCCACTTAATCATTTGAGAGATCCACAGGAATTCGCTGAGAAGCTATTCTCCCGTCTTCAAAATAGTACAAGAGTTGAACGCTTTGAGGTCAAAATGATGATGTTGAAAGTAGTTGCTCGAACTATTGGGCTTCATCGCTTGGTTCTGTTGAACTTTTATCCTTATTTTATCAACTACATTACGCCTCATCAAAATGGTGTCACTGAATTACTCGCTGCAGCAGTACAGGCCTGCCATGATATGGTTCCTCCTGATGCAGTTGAACCACTTTTCAAACAGATAGTTAACAAATTTATAGATGATCGTGCACAGCCAGAGGCCATAGCTGTTGGACTGAATACAACAAGGGAAATTTGTTTACGAATGCCTTTGTTGATGACAGAAGATTTGCTGCAAGATCTTGCATTATATAAGAAATCACATACAAAAGCAGTGTCAGTAGCAGCCCGTTCGCTTATTGGCTTATTCAGAGAGCTTAACCCCTCGCTGCTGATTAAGAAGGATCGTGGTCGCCAACATGTTGACTCAAAGGCAAGGCCAAAAGCGTATGGAGAAGTCGATGTACTTAGCAATGTTCCTGGTCTTGATTTACTAAAACATGATGATGACAATGGGGAGAGTGATAATGATGGTGATGATGAACCTTCAGTAAGGGGCACTGATGAGATGGTAGCTTCCAGTGATGATGAAGGCTTGCAAATAACCAACACTGATAGTGGAAGTGAAGATGACAACATGATATCTGAAGATGGTGATGAGATAGATGAGAATGACTGTGATGTGAGTGGTGATGAGGATGAGGTGGAAGCGGAGGACGAAGATGAGGATGAGGATGAGGAAGAGAATACAGAGGATGAGGAGGAAGAATTTGACAATAATGATGCCAAAGATGGTGGATCTGGAGTAAAAGAAAACATAGCAAAAAAGAGGAAATTTGCTGATTTTGATACACAACTTAATGACGCTGAAGCAAGTCTTAGGACTTTGAAGAGATTAGCCAAAGAAAATATGGGTCCTGCTCCATCAGACTCGACAGATGGTTTTCTTTCTAATGAGGACTTCCGGAGGATTAAGGAATTAAAGGCAAAGCAGCGATTGGCTCAGCAGGGGTTGTTGAAAAAGAGCTCAGATGCGAAGTCAACAGCATTCAAGATTCCCACTTCTGATGAATTAAGCATTAAGCGAATAGATCCTGCTAAGCTTGAAGTCCATGTAAAAAGAAGAATGACCAAGGAGGAGAAGCTGGCATTAGTGAAAGCAGGGAGGGAGGATAGAGGGAAGTACATGGCTAAAGCTGCTGTAAAACAGAAGAAGTCGGGAGGCCTGAGCAATAAGCAGAAGGAACATAAGAAGGCTATGCCACTTGTTGCAAAGAGGGCAAAGGTAGCTAAATCTCGAGTGGAAAAACGCAAAAAGCAGCAGCTTTCTGGCAAAAATTTCCGAGGGAAGAAAGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC130_3NT SDA1

Protein Analysis

664

Amino Acids

74.3

Weight (kDa)

7.28

Isoelectric Point (pI)

47.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SDA1_HEAT	PF08158	86 - 136	6.8e-08	SDA1, HEAT repeat
SDA1_HEAT	PF08158	136 - 316	3.4e-70	SDA1, HEAT repeat
SDA1_C	PF21638	616 - 661	1.4e-07	SDA1, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13160 AT4G31520 AT4G31520
fragaria_vesca	FvH4_4g25230 FvH4_4g25230 FvH4_4g25230
malus_domestica	MD16G1105900.v1.1
prunus_persica	Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1
pyrus_communis	pycom16g09000
rosa_chinensis	RchiOBHm_Chr4g0432421
rosa_laevigata	RLG00000002235 RLG00000003004 RLG00000006844
rosa_multiflora	Rmu_sc0001084.1_g000021 Rmu_sc0004638.1_g000008
rosa_roxburghii	Rroxscaffold_3G00239540 Rroxscaffold_5G00373890
rosa_rugosa	Rorug04G0258500 Rorug04G0258600 Rorug07G0201100
rosa_samantha	Rh4AG314100 Rh4BG321900 Rh4CG337000 Rh4DG317600 Rh7BG357200 Rh7DG347600
rosa_wichuraiana	Rw4G027310 Rw7G029620 Rw7G029960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	375
AccB7I	CCANNNNNTGG	1 cut(s)	769
AccII	CGCG	1 cut(s)	492
AccIII	TCCGGA	1 cut(s)	1590
AciI	CCGC	4 cut(s)	207, 210, 336, 1337
AclWI	GGATC	4 cut(s)	542, 1038, 1432, 1712
AcoI	YGGCCR	1 cut(s)	228
AcsI	RAATTY	6 cut(s)	557, 818, 879, 1394, 1460, 1963
AcuI	CTGAAG	3 cut(s)	1158, 1293, 1515
AcyI	GRCGYC	1 cut(s)	20
AfaI	GTAC	7 cut(s)	134, 421, 511, 595, 753, 1092, 1811
AfiI	CCNNNNNNNGG	3 cut(s)	45, 226, 769
AflIII	ACRYGT	2 cut(s)	490, 1045
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	2 cut(s)	282, 1105
Alw21I	GWGCWC	5 cut(s)	53, 123, 162, 838, 1655
Alw26I	GTCTC	2 cut(s)	107, 362
Alw44I	GTGCAC	1 cut(s)	834
AlwI	GGATC	4 cut(s)	542, 1038, 1432, 1712
Ama87I	CYCGRG	2 cut(s)	40, 1923
Aor13HI	TCCGGA	1 cut(s)	1590
AoxI	GGCC	8 cut(s)	36, 228, 285, 294, 756, 846, 1064, 1849
ApaLI	GTGCAC	1 cut(s)	834
ApoI	RAATTY	6 cut(s)	557, 818, 879, 1394, 1460, 1963
ArsI	GACNNNNNNTTYG	4 cut(s)	898, 930, 947, 979
Asp700I	GAANNNNTTC	1 cut(s)	572
AspLEI	GCGC	2 cut(s)	376, 409
AspS9I	GGNCC	4 cut(s)	235, 286, 295, 1541
AsuC2I	CCSGG	2 cut(s)	101, 248
AsuHPI	GGTGA	5 cut(s)	190, 262, 1172, 1292, 1328
AsuNHI	GCTAGC	1 cut(s)	428
AvaI	CYCGRG	2 cut(s)	40, 1923
AvaII	GGWCC	2 cut(s)	235, 1541
BaeGI	GKGCMC	2 cut(s)	838, 1187
BalI	TGGCCA	1 cut(s)	230
BanII	GRGCYC	4 cut(s)	53, 123, 162, 1655
BarI	GAAGNNNNNNTAC	2 cut(s)	1074, 1106
BbsI	GAAGAC	1 cut(s)	575
Bbv12I	GWGCWC	5 cut(s)	53, 123, 162, 838, 1655
BccI	CCATC	7 cut(s)	473, 1151, 1189, 1271, 1412, 1558, 1559
BcgI	CGANNNNNNTGC	2 cut(s)	960, 994
BciT130I	CCWGG	2 cut(s)	284, 1107
BcnI	CCSGG	2 cut(s)	101, 248
BcoDI	GTCTC	2 cut(s)	107, 362
BfaI	CTAG	1 cut(s)	429
BfmI	CTRYAG	2 cut(s)	455, 744
BglI	GCCNNNNNGGC	2 cut(s)	248, 293
BglII	AGATCT	1 cut(s)	925
BlpI	GCTNAGC	2 cut(s)	1629, 1725
BmcAI	AGTACT	1 cut(s)	511
Bme1390I	CCNGG	4 cut(s)	101, 248, 284, 1107
Bme18I	GGWCC	2 cut(s)	235, 1541
BmeT110I	CYCGRG	2 cut(s)	40, 1923
BmgBI	CACGTC	1 cut(s)	268
BmgT120I	GGNCC	4 cut(s)	235, 286, 295, 1541
BmiI	GGNNCC	3 cut(s)	27, 774, 1542
BmrFI	CCNGG	4 cut(s)	101, 248, 284, 1107
BmsI	GCATC	3 cut(s)	772, 1399, 1648
BmtI	GCTAGC	1 cut(s)	432
BpiI	GAAGAC	1 cut(s)	575
BplI	GAGNNNNNCTC	2 cut(s)	17, 49
BpmI	CTGGAG	2 cut(s)	176, 1449
Bpu10I	CCTNAGC	1 cut(s)	1853
Bpu1102I	GCTNAGC	2 cut(s)	1629, 1725
BpuMI	CCSGG	2 cut(s)	101, 248
BsaHI	GRCGYC	1 cut(s)	20
BsaI	GGTCTC	1 cut(s)	362
BsaJI	CCNNGG	5 cut(s)	39, 225, 231, 1758, 1969
BsaWI	WCCGGW	1 cut(s)	1590
Bsc4I	CCNNNNNNNGG	3 cut(s)	45, 226, 769
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	1 cut(s)	1206
Bse3DI	GCAATG	1 cut(s)	1105
BseAI	TCCGGA	1 cut(s)	1590
BseBI	CCWGG	2 cut(s)	284, 1107
BseDI	CCNNGG	5 cut(s)	39, 225, 231, 1758, 1969
BseGI	GGATG	5 cut(s)	465, 1330, 1360, 1366, 1387
BseLI	CCNNNNNNNGG	3 cut(s)	45, 226, 769
BseMI	GCAATG	1 cut(s)	1105
BseMII	CTCAG	5 cut(s)	373, 555, 1643, 1668, 1844
BseNI	ACTGG	1 cut(s)	1206
BseRI	GAGGAG	4 cut(s)	113, 322, 1400, 1778
BseSI	GKGCMC	2 cut(s)	838, 1187
BsgI	GTGCAG	1 cut(s)	311
Bsh1236I	CGCG	1 cut(s)	492
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	8 cut(s)	38, 230, 287, 296, 758, 848, 1066, 1851
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	5 cut(s)	53, 123, 162, 838, 1655
BsiHKCI	CYCGRG	2 cut(s)	40, 1923
BsiSI	CCGG	5 cut(s)	23, 101, 201, 247, 1591
BslI	CCNNNNNNNGG	3 cut(s)	45, 226, 769
BsmAI	GTCTC	2 cut(s)	107, 362
BsmBI	CGTCTC	1 cut(s)	107
BsmI	GAATGC	2 cut(s)	897, 1673
BsnI	GGCC	8 cut(s)	38, 230, 287, 296, 758, 848, 1066, 1851
Bso31I	GGTCTC	1 cut(s)	362
BsoBI	CYCGRG	2 cut(s)	40, 1923
Bsp1286I	GDGCHC	6 cut(s)	53, 123, 162, 838, 1187, 1655
Bsp13I	TCCGGA	1 cut(s)	1590
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1424, 1717
Bsp1720I	GCTNAGC	2 cut(s)	1629, 1725
BspACI	CCGC	4 cut(s)	207, 210, 336, 1337
BspANI	GGCC	8 cut(s)	38, 230, 287, 296, 758, 848, 1066, 1851
BspCNI	CTCAG	5 cut(s)	372, 556, 1642, 1667, 1845
BspEI	TCCGGA	1 cut(s)	1590
BspFNI	CGCG	1 cut(s)	492
BspLI	GGNNCC	3 cut(s)	27, 774, 1542
BspMAI	CTGCAG	2 cut(s)	459, 748
BspOI	GCTAGC	1 cut(s)	432
BspPI	GGATC	4 cut(s)	542, 1038, 1432, 1712
BspQI	GCTCTTC	1 cut(s)	167
BspTNI	GGTCTC	1 cut(s)	362
BsrDI	GCAATG	1 cut(s)	1105
BsrFI	RCCGGY	1 cut(s)	200
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	1 cut(s)	1206
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	5 cut(s)	39, 225, 231, 1758, 1969
BssMI	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1424, 1717
BssNI	GRCGYC	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	231, 1758
Bst2UI	CCWGG	2 cut(s)	284, 1107
Bst4CI	ACNGT	2 cut(s)	226, 1304
Bst6I	CTCTTC	3 cut(s)	167, 1362, 1511
BstACI	GRCGYC	1 cut(s)	20
BstAUI	TGTACA	1 cut(s)	132
BstC8I	GCNNGC	6 cut(s)	378, 430, 462, 760, 1223, 1773
BstDEI	CTNAG	8 cut(s)	359, 564, 1094, 1505, 1629, 1654, 1725, 1853
BstDSI	CCRYGG	1 cut(s)	225
BstF5I	GGATG	5 cut(s)	465, 1330, 1360, 1366, 1387
BstFNI	CGCG	1 cut(s)	492
BstHHI	GCGC	2 cut(s)	376, 409
BstKTI	GATC	7 cut(s)	181, 550, 832, 928, 1033, 1427, 1720
BstMAI	GTCTC	2 cut(s)	107, 362
BstMBI	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1424, 1717
BstMCI	CGRYCG	1 cut(s)	247
BstNI	CCWGG	2 cut(s)	284, 1107
BstNSI	RCATGY	2 cut(s)	371, 1049
BstSCI	CCNGG	4 cut(s)	99, 246, 282, 1105
BstSFI	CTRYAG	2 cut(s)	455, 744
BstSLI	GKGCMC	2 cut(s)	838, 1187
BstUI	CGCG	1 cut(s)	492
BstV2I	GAAGAC	1 cut(s)	575
BstX2I	RGATCY	4 cut(s)	547, 925, 1424, 1717
BstYI	RGATCY	4 cut(s)	547, 925, 1424, 1717
BsuRI	GGCC	8 cut(s)	38, 230, 287, 296, 758, 848, 1066, 1851
BtgI	CCRYGG	1 cut(s)	225
BtgZI	GCGATG	1 cut(s)	647
BtrI	CACGTC	1 cut(s)	268
BtsCI	GGATG	5 cut(s)	465, 1330, 1360, 1366, 1387
BtsI	GCAGTG	1 cut(s)	966
BtsIMutI	CAGTG	5 cut(s)	729, 966, 1185, 1213, 1236
Cac8I	GCNNGC	6 cut(s)	378, 430, 462, 760, 1223, 1773
CfoI	GCGC	2 cut(s)	376, 409
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	4 cut(s)	235, 286, 295, 1541
CseI	GACGC	2 cut(s)	28, 1499
Csp6I	GTAC	7 cut(s)	133, 420, 510, 594, 752, 1091, 1810
CspCI	CAANNNNNGTGG	2 cut(s)	1402, 1437
CviAII	CATG	9 cut(s)	16, 368, 764, 1046, 1127, 1264, 1739, 1813, 1983
CviQI	GTAC	7 cut(s)	133, 420, 510, 594, 752, 1091, 1810
DdeI	CTNAG	8 cut(s)	359, 564, 1094, 1505, 1629, 1654, 1725, 1853
DpnI	GATC	7 cut(s)	180, 549, 831, 927, 1032, 1426, 1719
DpnII	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1424, 1717
EaeI	YGGCCR	1 cut(s)	228
Eam1104I	CTCTTC	3 cut(s)	167, 1362, 1511
EarI	CTCTTC	3 cut(s)	167, 1362, 1511
EciI	GGCGGA	1 cut(s)	325
Ecl136II	GAGCTC	4 cut(s)	51, 121, 160, 1653
Eco130I	CCWWGG	2 cut(s)	231, 1758
Eco147I	AGGCCT	2 cut(s)	758, 1851
Eco24I	GRGCYC	4 cut(s)	53, 123, 162, 1655
Eco31I	GGTCTC	1 cut(s)	362
Eco32I	GATATC	1 cut(s)	1269
Eco47I	GGWCC	2 cut(s)	235, 1541
Eco53kI	GAGCTC	4 cut(s)	51, 121, 160, 1653
Eco57I	CTGAAG	3 cut(s)	1158, 1293, 1515
Eco88I	CYCGRG	2 cut(s)	40, 1923
EcoICRI	GAGCTC	4 cut(s)	51, 121, 160, 1653
EcoO109I	RGGNCCY	2 cut(s)	235, 1541
EcoRI	GAATTC	1 cut(s)	557
EcoRII	CCWGG	2 cut(s)	282, 1105
EcoRV	GATATC	1 cut(s)	1269
EcoT14I	CCWWGG	2 cut(s)	231, 1758
EcoT38I	GRGCYC	4 cut(s)	53, 123, 162, 1655
ErhI	CCWWGG	2 cut(s)	231, 1758
Esp3I	CGTCTC	1 cut(s)	107
FaeI	CATG	9 cut(s)	19, 371, 767, 1049, 1130, 1267, 1742, 1816, 1986
FalI	AAGNNNNNCTT	2 cut(s)	1488, 1520
FatI	CATG	9 cut(s)	15, 367, 763, 1045, 1126, 1263, 1738, 1812, 1982
FokI	GGATG	5 cut(s)	452, 1337, 1367, 1373, 1394
FriOI	GRGCYC	4 cut(s)	53, 123, 162, 1655
FspBI	CTAG	1 cut(s)	429
FspI	TGCGCA	1 cut(s)	375
GlaI	GCGC	2 cut(s)	375, 408
GsuI	CTGGAG	2 cut(s)	176, 1449
HaeIII	GGCC	8 cut(s)	38, 230, 287, 296, 758, 848, 1066, 1851
HapII	CCGG	5 cut(s)	23, 101, 201, 247, 1591
HgaI	GACGC	2 cut(s)	28, 1499
HhaI	GCGC	2 cut(s)	376, 409
Hin1I	GRCGYC	1 cut(s)	20
Hin1II	CATG	9 cut(s)	19, 371, 767, 1049, 1130, 1267, 1742, 1816, 1986
Hin6I	GCGC	2 cut(s)	374, 407
HinP1I	GCGC	2 cut(s)	374, 407
HincII	GTYRAC	3 cut(s)	814, 1051, 1668
HindII	GTYRAC	3 cut(s)	814, 1051, 1668
HindIII	AAGCTT	1 cut(s)	1727
HinfI	GANTC	5 cut(s)	64, 186, 1052, 1556, 1681
HpaI	GTTAAC	1 cut(s)	814
HpaII	CCGG	5 cut(s)	23, 101, 201, 247, 1591
HphI	GGTGA	5 cut(s)	190, 262, 1172, 1292, 1328
Hpy166II	GTNNAC	7 cut(s)	133, 422, 814, 836, 887, 1051, 1668
Hpy188III	TCNNGA	7 cut(s)	779, 1112, 1428, 1591, 1678, 1845, 1923
Hpy8I	GTNNAC	7 cut(s)	133, 422, 814, 836, 887, 1051, 1668
Hpy99I	CGWCG	1 cut(s)	154
HpyAV	CCTTC	6 cut(s)	98, 1021, 1182, 1211, 1861, 1873
HpyCH4III	ACNGT	2 cut(s)	226, 1304
HpyCH4IV	ACGT	1 cut(s)	267
HpyF3I	CTNAG	8 cut(s)	359, 564, 1094, 1505, 1629, 1654, 1725, 1853
HpySE526I	ACGT	1 cut(s)	267
Hsp92I	GRCGYC	1 cut(s)	20
Hsp92II	CATG	9 cut(s)	19, 371, 767, 1049, 1130, 1267, 1742, 1816, 1986
HspAI	GCGC	2 cut(s)	374, 407
Kpn2I	TCCGGA	1 cut(s)	1590
KspAI	GTTAAC	1 cut(s)	814
Kzo9I	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1424, 1717
LguI	GCTCTTC	1 cut(s)	167
LmnI	GCTCC	7 cut(s)	25, 48, 56, 118, 126, 157, 1552
LweI	GCATC	3 cut(s)	772, 1399, 1648
MaeI	CTAG	1 cut(s)	429
MaeII	ACGT	1 cut(s)	267
MaeIII	GTNAC	4 cut(s)	196, 268, 493, 727
MalI	GATC	7 cut(s)	180, 549, 831, 927, 1032, 1426, 1719
MboI	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1424, 1717
MfeI	CAATTG	1 cut(s)	290
MflI	RGATCY	4 cut(s)	547, 925, 1424, 1717
MhlI	GDGCHC	6 cut(s)	53, 123, 162, 838, 1187, 1655
MlsI	TGGCCA	1 cut(s)	230
MluI	ACGCGT	1 cut(s)	490
MluNI	TGGCCA	1 cut(s)	230
MlyI	GAGTC	3 cut(s)	73, 1046, 1550
MmeI	TCCRAC	2 cut(s)	26, 838
Mox20I	TGGCCA	1 cut(s)	230
MroI	TCCGGA	1 cut(s)	1590
MroXI	GAANNNNTTC	1 cut(s)	572
MscI	TGGCCA	1 cut(s)	230
MseI	TTAA	9 cut(s)	534, 813, 1005, 1023, 1485, 1599, 1607, 1700, 1707
MslI	CAYNNNNRTG	3 cut(s)	720, 1131, 1987
Msp20I	TGGCCA	1 cut(s)	230
MspA1I	CMGCKG	1 cut(s)	207
MspI	CCGG	5 cut(s)	23, 101, 201, 247, 1591
MspR9I	CCNGG	4 cut(s)	101, 248, 284, 1107
MunI	CAATTG	1 cut(s)	290
Mva1269I	GAATGC	2 cut(s)	897, 1673
MvaI	CCWGG	2 cut(s)	284, 1107
MvnI	CGCG	1 cut(s)	492
NciI	CCSGG	2 cut(s)	101, 248
NdeII	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1424, 1717
NheI	GCTAGC	1 cut(s)	428
NlaIII	CATG	9 cut(s)	19, 371, 767, 1049, 1130, 1267, 1742, 1816, 1986
NlaIV	GGNNCC	3 cut(s)	27, 774, 1542
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	3 cut(s)	196, 268, 727
NsbI	TGCGCA	1 cut(s)	375
NspI	RCATGY	2 cut(s)	371, 1049
PaeR7I	CTCGAG	1 cut(s)	1923
PceI	AGGCCT	2 cut(s)	758, 1851
PciI	ACATGT	1 cut(s)	1045
PciSI	GCTCTTC	1 cut(s)	167
PctI	GAATGC	2 cut(s)	897, 1673
PdmI	GAANNNNTTC	1 cut(s)	572
PfeI	GAWTC	2 cut(s)	186, 1681
PflMI	CCANNNNNTGG	1 cut(s)	769
PleI	GAGTC	3 cut(s)	72, 1046, 1550
PpsI	GAGTC	3 cut(s)	72, 1046, 1550
PpuMI	RGGWCCY	2 cut(s)	235, 1541
PscI	ACATGT	1 cut(s)	1045
Psp124BI	GAGCTC	4 cut(s)	53, 123, 162, 1655
Psp5II	RGGWCCY	2 cut(s)	235, 1541
Psp6I	CCWGG	2 cut(s)	282, 1105
PspGI	CCWGG	2 cut(s)	282, 1105
PspN4I	GGNNCC	3 cut(s)	27, 774, 1542
PspPI	GGNCC	4 cut(s)	235, 286, 295, 1541
PspPPI	RGGWCCY	2 cut(s)	235, 1541
PstI	CTGCAG	2 cut(s)	459, 748
PsuI	RGATCY	4 cut(s)	547, 925, 1424, 1717
RsaI	GTAC	7 cut(s)	134, 421, 511, 595, 753, 1092, 1811
RsaNI	GTAC	7 cut(s)	133, 420, 510, 594, 752, 1091, 1810
RseI	CAYNNNNRTG	3 cut(s)	720, 1131, 1987
SacI	GAGCTC	4 cut(s)	53, 123, 162, 1655
SapI	GCTCTTC	1 cut(s)	167
SaqAI	TTAA	9 cut(s)	534, 813, 1005, 1023, 1485, 1599, 1607, 1700, 1707
Sau3AI	GATC	7 cut(s)	178, 547, 829, 925, 1030, 1424, 1717
Sau96I	GGNCC	4 cut(s)	235, 286, 295, 1541
ScaI	AGTACT	1 cut(s)	511
SchI	GAGTC	3 cut(s)	73, 1046, 1550
ScrFI	CCNGG	4 cut(s)	101, 248, 284, 1107
SduI	GDGCHC	6 cut(s)	53, 123, 162, 838, 1187, 1655
SfaNI	GCATC	3 cut(s)	772, 1399, 1648
SfcI	CTRYAG	2 cut(s)	455, 744
SfiI	GGCCNNNNNGGCC	1 cut(s)	293
Sfr274I	CTCGAG	1 cut(s)	1923
SinI	GGWCC	2 cut(s)	235, 1541
SlaI	CTCGAG	1 cut(s)	1923
SmiMI	CAYNNNNRTG	3 cut(s)	720, 1131, 1987
SmlI	CTYRAG	1 cut(s)	1923
SmoI	CTYRAG	1 cut(s)	1923
SseBI	AGGCCT	2 cut(s)	758, 1851
SsiI	CCGC	4 cut(s)	207, 210, 336, 1337
SspMI	CTAG	1 cut(s)	429
SstI	GAGCTC	4 cut(s)	53, 123, 162, 1655
StuI	AGGCCT	2 cut(s)	758, 1851
StyD4I	CCNGG	4 cut(s)	99, 246, 282, 1105
StyI	CCWWGG	2 cut(s)	231, 1758
TaaI	ACNGT	2 cut(s)	226, 1304
TaiI	ACGT	1 cut(s)	270
TaqI	TCGA	4 cut(s)	646, 1086, 1559, 1924
TatI	WGTACW	6 cut(s)	132, 509, 593, 751, 1090, 1809
TauI	GCSGC	2 cut(s)	210, 213
TfiI	GAWTC	2 cut(s)	186, 1681
Tru1I	TTAA	9 cut(s)	534, 813, 1005, 1023, 1485, 1599, 1607, 1700, 1707
Tru9I	TTAA	9 cut(s)	534, 813, 1005, 1023, 1485, 1599, 1607, 1700, 1707
TscAI	CASTG	5 cut(s)	736, 966, 1192, 1213, 1243
TseFI	GTSAC	3 cut(s)	196, 268, 727
Tsp45I	GTSAC	3 cut(s)	196, 268, 727
TspDTI	ATGAA	6 cut(s)	104, 410, 650, 1182, 1230, 1710
TspGWI	ACGGA	3 cut(s)	131, 184, 458
TspRI	CASTG	5 cut(s)	736, 966, 1192, 1213, 1243
Van91I	CCANNNNNTGG	1 cut(s)	769
VneI	GTGCAC	1 cut(s)	834
VpaK11BI	GGWCC	2 cut(s)	235, 1541
XapI	RAATTY	6 cut(s)	557, 818, 879, 1394, 1460, 1963
XceI	RCATGY	2 cut(s)	371, 1049
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1534
XhoI	CTCGAG	1 cut(s)	1923
XmnI	GAANNNNTTC	1 cut(s)	572
XspI	CTAG	1 cut(s)	429
ZrmI	AGTACT	1 cut(s)	511

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.