Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0004693

Physical Location & Seq

Genomic Coordinates Reverse (-)

62428917 .. 62434529

Gene Structure 5613 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG314100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2415 bp

ATGAGTTCCCACTGCATGACGCCGGAGCCACTCTCGGCCTCGGGTCGGAGCTCCGAGAAGATGAGCCTGCCCACACTTCAATCCAAGATGAAGTGCGACCCGGAAGGCTACGAGACCGAGCTCCTCCTTGTGTACAACCAATTCAAGTCGTCGCTGGAGCTCTTCAAGCAGCAAGCCGATCTCGGATTCAAGTCCGTCACCGGCAGCGGCGCCAGCGACCCCACCGTCGCCAAGGACCTCGCCGACCGGGCATTGTTTCTCGCCCACGTCACCCCCTTTTACCCGGCCCAATTGGCCCAATTCCCCTCACAGCTCTCCCAGTTTCTCCACTCCTCCGCCCGAACGCTTCCCTCTGGTCTCAGATTGCATGTTGCTCAAGCTCTCATTCTTCTTATGAACAGAAAGATGGTGGATATTGCAGACAATCTAGGTTTGTTCATGGAGATACAGACTTATGGCGATAAGGCTTTAAAGACCCTGGCATACAATCATGTCATACATAGCATAAAGCGAATGAATATGAAGCATAAGAATGAAGCTAAGAATCGGGTGCTTCAGAATGTCTTGTTTCGGATGCTACAGCTAGAGGATGAAACAAAAGCAAAGAGAGCACTTATCACTCTACGTGAGCTTCACCGGAGAAAGGTGTGGTTTGATGAAAATACAGCAAACGCAATCTGCTCTGCATGTTTTCATCCATCGTCGAGGATAATGATTGCTTGTCTCTCATTTCTGCTTGATTACGAGAAGATTGAGGAGGAGGATGATAGTGATGCGTCAAGTAGTGATGAGGACACTCCTATTAAATCTCATCTAGCCATTAATAGAGAGGATATATATAAGGCGCACCATAAGGGTACACTTGCTAGCAAGAAGAAAAAGAAAGCAAAACTGCAGCGTGCCATTCGTAGCCTGAAAAAACAGCAACGCGTAACATCAGAAAAAAGTACTTCAAATTATCATACGCCACTTAATCATTTGAGAGATCCACAGGAATTTGCTGAGAAGCTATTCTCCCGTCTTCAAAATAGTACAAGAGTTGAACGCTTTGAGGTCAAAATGATGATGTTGAAAGTAGTTGCTCGAACTATTGGGCTTCATCGCTTGGTTCTGTTGAACTTTTATCCTTATTTTATCAACTACATTACGCCTCATCAAAATGGTGTCACTGAATTACTCGCTGCAGCAGTCCAGGCCTGCCATGATATGGTTCCTCCTGATGCAGTTGAACCACTTTTCAAACAAGTAGTGAACAAATTTATAGATGATCGTGCACAGCCAGAGGCCATAGCTGTTGGACTGAATACAACAAGGGAAATTTGTTTACGAATGCCTTTGTTGATGACAGAAGATTTGCTGCAAGATCTTGCATTATATAAGAAATCACATACAAAAGCAGTGTCAGTAGCAGCCCGTTCACTTATTGGCTTGTTCAGAGAGCTTAACCCCTCGCTGCTGATTAAGAAGGATCGTGGTCGCCAACATGTTGACTCAAAGGCAAGGCCAAAAGCGTATGGAGAAGTCAATGTACTTATCAATGTTCCTGGTCTTGATTTACTAAAACATGATGATGACAATGGGGAGAGTGATGATGATGATGAACCTTCAGTAAGGGGCACTGATGAGATGGTAGCTTCCAGTGATGATGAAGGCTTGCAAATAACCAACACTGATAGTGGAAGTGAAGATGACAACATGATATCTGAAGATGGTGATGAGATAGATGAGAATGACAGTGATGTGAGTGGTGATGAGGATGAGGTGGAAGCGGAGGATGAAGATGAGGATGAGGAAGAGAATACAGAGGATGAGGAGGAAGAATTTGACAATAATGATGCCAAAGATGGTGGATCTGGAGTAAAAGAAAACATAGCAAAAAAGAGGAAATTTGCTGATTTTGATACACAACTTAATGATGCTGAAGCAAGTCTTAGGACTTTGAAGAGATTAGCCAAAGAAAATATGGGTCCTGCTCCATCAGACTCGACAGATGGTTTTCTTTCTAATGAGGACTTCCGGAGGATTAAGGAATTAAAGGCAAAGCAGCGATTGGCTCAGCAGGGGTTGTTGAAAAAGAGCTCAGATGCGAAGTCAACAGCATTCAAGATTCCCACTTCTGATGAATTAAGCATTAAGCGAATAGATCCTGCTAAGCTTGAAGTCCATGTAAAAAGAAGAATGACCAAGGAGGAGAAGCTGGCATTAGTGAAAGCAGGGAGGGAGGATAGAGTTTACATGGCTAGAGCTGCTGTAAAACAGAAGAAGTCGGGAGGCCTGAGCAATAAGCAGAAGGAACATAAGAAGGCTATGCCACTTGTTGCAAAGAGGGCAAAGGTAGCTAAATCTCGAGTGGCAAAACGCAAAAAGCAGCAGCTTTCTGGCAAAAATTTCCGAGGGAAGAAAGCATGGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NUC130_3NT SDA1

Protein Analysis

804

Amino Acids

90.67

Weight (kDa)

7.64

Isoelectric Point (pI)

47.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SDA1_HEAT	PF08158	86 - 462	3e-128	SDA1, HEAT repeat
SDA1_C	PF21638	757 - 802	5e-07	SDA1, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004693)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13160 AT4G31520 AT4G31520
fragaria_vesca	FvH4_4g25230 FvH4_4g25230 FvH4_4g25230
malus_domestica	MD16G1105900.v1.1
prunus_persica	Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1 Prupe.1G240500_v2.0.a1
pyrus_communis	pycom16g09000
rosa_chinensis	RchiOBHm_Chr4g0432421
rosa_laevigata	RLG00000002235 RLG00000003004 RLG00000006844
rosa_multiflora	Rmu_sc0001084.1_g000021 Rmu_sc0004638.1_g000008
rosa_roxburghii	Rroxscaffold_3G00239540 Rroxscaffold_5G00373890
rosa_rugosa	Rorug04G0258500 Rorug04G0258600 Rorug07G0201100
rosa_samantha	Rh4AG314100 Rh4BG321900 Rh4CG337000 Rh4DG317600 Rh7BG357200 Rh7DG347600
rosa_wichuraiana	Rw4G027310 Rw7G029620 Rw7G029960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	224
AccB1I	GGYRCC	1 cut(s)	209
AccB7I	CCANNNNNTGG	1 cut(s)	1207
AccII	CGCG	1 cut(s)	930
AccIII	TCCGGA	1 cut(s)	2016
AciI	CCGC	3 cut(s)	207, 336, 1769
AclWI	GGATC	4 cut(s)	980, 1476, 1858, 2138
AcsI	RAATTY	6 cut(s)	995, 1256, 1317, 1820, 1886, 2386
AcuI	CTGAAG	4 cut(s)	539, 1590, 1725, 1941
AcyI	GRCGYC	2 cut(s)	20, 210
AfaI	GTAC	5 cut(s)	134, 859, 949, 1033, 1530
AfiI	CCNNNNNNNGG	3 cut(s)	45, 643, 1207
AflIII	ACRYGT	2 cut(s)	928, 1483
AjiI	CACGTC	1 cut(s)	268
AjnI	CCWGG	3 cut(s)	477, 1191, 1543
Alw21I	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2081
Alw26I	GTCTC	3 cut(s)	107, 362, 728
Alw44I	GTGCAC	1 cut(s)	1272
AlwI	GGATC	4 cut(s)	980, 1476, 1858, 2138
Ama87I	CYCGRG	2 cut(s)	40, 2346
Aor13HI	TCCGGA	1 cut(s)	2016
AoxI	GGCC	7 cut(s)	36, 285, 294, 1194, 1284, 1502, 2272
ApaLI	GTGCAC	1 cut(s)	1272
ApoI	RAATTY	6 cut(s)	995, 1256, 1317, 1820, 1886, 2386
ArsI	GACNNNNNNTTYG	4 cut(s)	1336, 1368, 1385, 1417
AseI	ATTAAT	1 cut(s)	822
Asp700I	GAANNNNTTC	1 cut(s)	1010
AspLEI	GCGC	2 cut(s)	212, 847
AspS9I	GGNCC	4 cut(s)	235, 286, 295, 1967
AsuC2I	CCSGG	3 cut(s)	101, 248, 284
AsuHPI	GGTGA	5 cut(s)	190, 262, 626, 1724, 1760
AsuNHI	GCTAGC	1 cut(s)	866
AvaI	CYCGRG	2 cut(s)	40, 2346
AvaII	GGWCC	2 cut(s)	235, 1967
BaeGI	GKGCMC	2 cut(s)	1276, 1619
BanI	GGYRCC	1 cut(s)	209
BanII	GRGCYC	4 cut(s)	53, 123, 162, 2081
BarI	GAAGNNNNNNTAC	2 cut(s)	1512, 1544
BbsI	GAAGAC	1 cut(s)	1013
Bbv12I	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2081
BccI	CCATC	7 cut(s)	400, 706, 1621, 1703, 1838, 1984, 1985
BciT130I	CCWGG	3 cut(s)	479, 1193, 1545
BcnI	CCSGG	3 cut(s)	101, 248, 284
BcoDI	GTCTC	3 cut(s)	107, 362, 728
BfaI	CTAG	5 cut(s)	428, 584, 815, 867, 2241
BfmI	CTRYAG	3 cut(s)	578, 893, 1182
BfoI	RGCGCY	1 cut(s)	213
BglI	GCCNNNNNGGC	2 cut(s)	248, 293
BglII	AGATCT	1 cut(s)	1363
BlpI	GCTNAGC	2 cut(s)	2055, 2151
BmcAI	AGTACT	1 cut(s)	949
Bme1390I	CCNGG	6 cut(s)	101, 248, 284, 479, 1193, 1545
Bme18I	GGWCC	2 cut(s)	235, 1967
BmeT110I	CYCGRG	2 cut(s)	40, 2346
BmgBI	CACGTC	1 cut(s)	268
BmgT120I	GGNCC	4 cut(s)	235, 286, 295, 1967
BmiI	GGNNCC	4 cut(s)	27, 211, 1212, 1968
BmrFI	CCNGG	6 cut(s)	101, 248, 284, 479, 1193, 1545
BmrI	ACTGGG	1 cut(s)	313
BmsI	GCATC	6 cut(s)	564, 763, 1210, 1825, 1906, 2074
BmtI	GCTAGC	1 cut(s)	870
BmuI	ACTGGG	1 cut(s)	313
BpiI	GAAGAC	1 cut(s)	1013
BplI	GAGNNNNNCTC	2 cut(s)	17, 49
BpmI	CTGGAG	2 cut(s)	176, 1875
Bpu10I	CCTNAGC	1 cut(s)	2276
Bpu1102I	GCTNAGC	2 cut(s)	2055, 2151
BpuEI	CTTGAG	1 cut(s)	360
BpuMI	CCSGG	3 cut(s)	101, 248, 284
BsaAI	YACGTR	1 cut(s)	626
BsaHI	GRCGYC	2 cut(s)	20, 210
BsaI	GGTCTC	2 cut(s)	107, 362
BsaJI	CCNNGG	5 cut(s)	39, 231, 477, 2184, 2392
BsaWI	WCCGGW	2 cut(s)	636, 2016
Bsc4I	CCNNNNNNNGG	3 cut(s)	45, 643, 1207
Bse118I	RCCGGY	1 cut(s)	200
Bse1I	ACTGG	2 cut(s)	319, 1638
BseAI	TCCGGA	1 cut(s)	2016
BseBI	CCWGG	3 cut(s)	479, 1193, 1545
BseDI	CCNNGG	5 cut(s)	39, 231, 477, 2184, 2392
BseGI	GGATG	8 cut(s)	579, 595, 694, 769, 1762, 1780, 1792, 1813
BseLI	CCNNNNNNNGG	3 cut(s)	45, 643, 1207
BseMII	CTCAG	5 cut(s)	373, 993, 2069, 2094, 2267
BseNI	ACTGG	2 cut(s)	319, 1638
BseRI	GAGGAG	6 cut(s)	113, 322, 770, 773, 1826, 2204
BseSI	GKGCMC	2 cut(s)	1276, 1619
Bsh1236I	CGCG	1 cut(s)	930
Bsh1285I	CGRYCG	1 cut(s)	247
BshFI	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2274
BshNI	GGYRCC	1 cut(s)	209
BsiEI	CGRYCG	1 cut(s)	247
BsiHKAI	GWGCWC	6 cut(s)	53, 123, 162, 613, 1276, 2081
BsiHKCI	CYCGRG	2 cut(s)	40, 2346
BsiSI	CCGG	7 cut(s)	23, 101, 201, 247, 284, 637, 2017
BslI	CCNNNNNNNGG	3 cut(s)	45, 643, 1207
BsmAI	GTCTC	3 cut(s)	107, 362, 728
BsmI	GAATGC	2 cut(s)	1335, 2099
BsnI	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2274
Bso31I	GGTCTC	2 cut(s)	107, 362
BsoBI	CYCGRG	2 cut(s)	40, 2346
Bsp1286I	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1619, 2081
Bsp13I	TCCGGA	1 cut(s)	2016
Bsp1407I	TGTACA	1 cut(s)	132
Bsp143I	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1850, 2143
Bsp1720I	GCTNAGC	2 cut(s)	2055, 2151
BspACI	CCGC	3 cut(s)	207, 336, 1769
BspANI	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2274
BspCNI	CTCAG	5 cut(s)	372, 994, 2068, 2093, 2268
BspEI	TCCGGA	1 cut(s)	2016
BspFNI	CGCG	1 cut(s)	930
BspLI	GGNNCC	4 cut(s)	27, 211, 1212, 1968
BspMAI	CTGCAG	2 cut(s)	897, 1186
BspOI	GCTAGC	1 cut(s)	870
BspPI	GGATC	4 cut(s)	980, 1476, 1858, 2138
BspQI	GCTCTTC	1 cut(s)	167
BspT107I	GGYRCC	1 cut(s)	209
BspTNI	GGTCTC	2 cut(s)	107, 362
BsrFI	RCCGGY	1 cut(s)	200
BsrGI	TGTACA	1 cut(s)	132
BsrI	ACTGG	2 cut(s)	319, 1638
BssAI	RCCGGY	1 cut(s)	200
BssECI	CCNNGG	5 cut(s)	39, 231, 477, 2184, 2392
BssMI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1850, 2143
BssNI	GRCGYC	2 cut(s)	20, 210
BssT1I	CCWWGG	2 cut(s)	231, 2184
Bst2UI	CCWGG	3 cut(s)	479, 1193, 1545
Bst4CI	ACNGT	2 cut(s)	226, 1736
Bst6I	CTCTTC	3 cut(s)	167, 1788, 1937
BstACI	GRCGYC	2 cut(s)	20, 210
BstAUI	TGTACA	1 cut(s)	132
BstBAI	YACGTR	1 cut(s)	626
BstC8I	GCNNGC	8 cut(s)	68, 174, 214, 868, 900, 1198, 1655, 2199
BstDEI	CTNAG	8 cut(s)	359, 540, 1002, 1931, 2055, 2080, 2151, 2276
BstF5I	GGATG	8 cut(s)	579, 595, 694, 769, 1762, 1780, 1792, 1813
BstFNI	CGCG	1 cut(s)	930
BstH2I	RGCGCY	1 cut(s)	213
BstHHI	GCGC	2 cut(s)	212, 847
BstKTI	GATC	7 cut(s)	181, 988, 1270, 1366, 1471, 1853, 2146
BstMAI	GTCTC	3 cut(s)	107, 362, 728
BstMBI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1850, 2143
BstMCI	CGRYCG	1 cut(s)	247
BstMWI	GCNNNNNNNGC	9 cut(s)	166, 213, 248, 293, 608, 1193, 2246, 2327, 2336
BstNI	CCWGG	3 cut(s)	479, 1193, 1545
BstNSI	RCATGY	3 cut(s)	371, 690, 1487
BstSCI	CCNGG	6 cut(s)	99, 246, 282, 477, 1191, 1543
BstSFI	CTRYAG	3 cut(s)	578, 893, 1182
BstSLI	GKGCMC	2 cut(s)	1276, 1619
BstUI	CGCG	1 cut(s)	930
BstV2I	GAAGAC	1 cut(s)	1013
BstX2I	RGATCY	4 cut(s)	985, 1363, 1850, 2143
BstYI	RGATCY	4 cut(s)	985, 1363, 1850, 2143
BsuRI	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2274
BtgZI	GCGATG	1 cut(s)	1085
BtrI	CACGTC	1 cut(s)	268
BtsCI	GGATG	8 cut(s)	579, 595, 694, 769, 1762, 1780, 1792, 1813
BtsI	GCAGTG	2 cut(s)	10, 1404
BtsIMutI	CAGTG	7 cut(s)	10, 1167, 1404, 1617, 1645, 1668, 1741
Cac8I	GCNNGC	8 cut(s)	68, 174, 214, 868, 900, 1198, 1655, 2199
CfoI	GCGC	2 cut(s)	212, 847
Cfr10I	RCCGGY	1 cut(s)	200
Cfr13I	GGNCC	4 cut(s)	235, 286, 295, 1967
CseI	GACGC	2 cut(s)	28, 765
Csp6I	GTAC	5 cut(s)	133, 858, 948, 1032, 1529
CspCI	CAANNNNNGTGG	2 cut(s)	1828, 1863
CviQI	GTAC	5 cut(s)	133, 858, 948, 1032, 1529
DdeI	CTNAG	8 cut(s)	359, 540, 1002, 1931, 2055, 2080, 2151, 2276
DinI	GGCGCC	1 cut(s)	211
DpnI	GATC	7 cut(s)	180, 987, 1269, 1365, 1470, 1852, 2145
DpnII	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1850, 2143
DraI	TTTAAA	1 cut(s)	471
DrdI	GACNNNNNNGTC	1 cut(s)	224
DseDI	GACNNNNNNGTC	1 cut(s)	224
Eam1104I	CTCTTC	3 cut(s)	167, 1788, 1937
EarI	CTCTTC	3 cut(s)	167, 1788, 1937
EciI	GGCGGA	1 cut(s)	325
Ecl136II	GAGCTC	4 cut(s)	51, 121, 160, 2079
Eco130I	CCWWGG	2 cut(s)	231, 2184
Eco147I	AGGCCT	2 cut(s)	1196, 2274
Eco24I	GRGCYC	4 cut(s)	53, 123, 162, 2081
Eco31I	GGTCTC	2 cut(s)	107, 362
Eco32I	GATATC	1 cut(s)	1701
Eco47I	GGWCC	2 cut(s)	235, 1967
Eco53kI	GAGCTC	4 cut(s)	51, 121, 160, 2079
Eco57I	CTGAAG	4 cut(s)	539, 1590, 1725, 1941
Eco88I	CYCGRG	2 cut(s)	40, 2346
EcoICRI	GAGCTC	4 cut(s)	51, 121, 160, 2079
EcoO109I	RGGNCCY	2 cut(s)	235, 1967
EcoRII	CCWGG	3 cut(s)	477, 1191, 1543
EcoRV	GATATC	1 cut(s)	1701
EcoT14I	CCWWGG	2 cut(s)	231, 2184
EcoT38I	GRGCYC	4 cut(s)	53, 123, 162, 2081
EgeI	GGCGCC	1 cut(s)	211
EheI	GGCGCC	1 cut(s)	211
ErhI	CCWWGG	2 cut(s)	231, 2184
FalI	AAGNNNNNCTT	2 cut(s)	1914, 1946
FokI	GGATG	8 cut(s)	586, 602, 681, 776, 1769, 1787, 1799, 1820
FriOI	GRGCYC	4 cut(s)	53, 123, 162, 2081
FspBI	CTAG	5 cut(s)	428, 584, 815, 867, 2241
GlaI	GCGC	2 cut(s)	211, 846
GsuI	CTGGAG	2 cut(s)	176, 1875
HaeII	RGCGCY	1 cut(s)	213
HaeIII	GGCC	7 cut(s)	38, 287, 296, 1196, 1286, 1504, 2274
HapII	CCGG	7 cut(s)	23, 101, 201, 247, 284, 637, 2017
HgaI	GACGC	2 cut(s)	28, 765
HhaI	GCGC	2 cut(s)	212, 847
Hin1I	GRCGYC	2 cut(s)	20, 210
Hin6I	GCGC	2 cut(s)	210, 845
HinP1I	GCGC	2 cut(s)	210, 845
HincII	GTYRAC	2 cut(s)	1489, 2094
HindII	GTYRAC	2 cut(s)	1489, 2094
HindIII	AAGCTT	1 cut(s)	2153
HinfI	GANTC	5 cut(s)	186, 544, 1490, 1982, 2107
HpaII	CCGG	7 cut(s)	23, 101, 201, 247, 284, 637, 2017
HphI	GGTGA	5 cut(s)	190, 262, 626, 1724, 1760
Hpy166II	GTNNAC	9 cut(s)	133, 860, 1252, 1274, 1325, 1418, 1489, 2094, 2233
Hpy188III	TCNNGA	7 cut(s)	1217, 1550, 1854, 2017, 2104, 2268, 2346
Hpy8I	GTNNAC	9 cut(s)	133, 860, 1252, 1274, 1325, 1418, 1489, 2094, 2233
Hpy99I	CGWCG	3 cut(s)	154, 230, 706
HpyAV	CCTTC	6 cut(s)	98, 1459, 1614, 1643, 2284, 2296
HpyCH4III	ACNGT	2 cut(s)	226, 1736
HpyCH4IV	ACGT	2 cut(s)	267, 625
HpyF10VI	GCNNNNNNNGC	9 cut(s)	166, 213, 248, 293, 608, 1193, 2246, 2327, 2336
HpyF3I	CTNAG	8 cut(s)	359, 540, 1002, 1931, 2055, 2080, 2151, 2276
HpySE526I	ACGT	2 cut(s)	267, 625
Hsp92I	GRCGYC	2 cut(s)	20, 210
HspAI	GCGC	2 cut(s)	210, 845
KasI	GGCGCC	1 cut(s)	209
Kpn2I	TCCGGA	1 cut(s)	2016
Kzo9I	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1850, 2143
LguI	GCTCTTC	1 cut(s)	167
LmnI	GCTCC	6 cut(s)	25, 48, 56, 126, 157, 1978
LweI	GCATC	6 cut(s)	564, 763, 1210, 1825, 1906, 2074
MaeI	CTAG	5 cut(s)	428, 584, 815, 867, 2241
MaeII	ACGT	2 cut(s)	267, 625
MaeIII	GTNAC	4 cut(s)	196, 268, 931, 1165
MalI	GATC	7 cut(s)	180, 987, 1269, 1365, 1470, 1852, 2145
MboI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1850, 2143
MfeI	CAATTG	1 cut(s)	290
MflI	RGATCY	4 cut(s)	985, 1363, 1850, 2143
MhlI	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1619, 2081
MluI	ACGCGT	1 cut(s)	928
Mly113I	GGCGCC	1 cut(s)	210
MlyI	GAGTC	2 cut(s)	1484, 1976
MmeI	TCCRAC	2 cut(s)	26, 1276
MroI	TCCGGA	1 cut(s)	2016
MroXI	GAANNNNTTC	1 cut(s)	1010
MslI	CAYNNNNRTG	4 cut(s)	531, 1158, 1569, 2410
MspA1I	CMGCKG	1 cut(s)	207
MspI	CCGG	7 cut(s)	23, 101, 201, 247, 284, 637, 2017
MspR9I	CCNGG	6 cut(s)	101, 248, 284, 479, 1193, 1545
MunI	CAATTG	1 cut(s)	290
Mva1269I	GAATGC	2 cut(s)	1335, 2099
MvaI	CCWGG	3 cut(s)	479, 1193, 1545
MvnI	CGCG	1 cut(s)	930
MwoI	GCNNNNNNNGC	9 cut(s)	166, 213, 248, 293, 608, 1193, 2246, 2327, 2336
NarI	GGCGCC	1 cut(s)	210
NciI	CCSGG	3 cut(s)	101, 248, 284
NdeII	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1850, 2143
NheI	GCTAGC	1 cut(s)	866
NlaIV	GGNNCC	4 cut(s)	27, 211, 1212, 1968
NmeAIII	GCCGAG	1 cut(s)	14
NmuCI	GTSAC	3 cut(s)	196, 268, 1165
NspI	RCATGY	3 cut(s)	371, 690, 1487
PaeR7I	CTCGAG	1 cut(s)	2346
PceI	AGGCCT	2 cut(s)	1196, 2274
PciI	ACATGT	1 cut(s)	1483
PciSI	GCTCTTC	1 cut(s)	167
PctI	GAATGC	2 cut(s)	1335, 2099
PdmI	GAANNNNTTC	1 cut(s)	1010
PfeI	GAWTC	3 cut(s)	186, 544, 2107
PflMI	CCANNNNNTGG	1 cut(s)	1207
PleI	GAGTC	2 cut(s)	1484, 1976
PluTI	GGCGCC	1 cut(s)	213
PpsI	GAGTC	2 cut(s)	1484, 1976
Ppu21I	YACGTR	1 cut(s)	626
PpuMI	RGGWCCY	2 cut(s)	235, 1967
PscI	ACATGT	1 cut(s)	1483
PshBI	ATTAAT	1 cut(s)	822
Psp124BI	GAGCTC	4 cut(s)	53, 123, 162, 2081
Psp5II	RGGWCCY	2 cut(s)	235, 1967
Psp6I	CCWGG	3 cut(s)	477, 1191, 1543
PspGI	CCWGG	3 cut(s)	477, 1191, 1543
PspN4I	GGNNCC	4 cut(s)	27, 211, 1212, 1968
PspPI	GGNCC	4 cut(s)	235, 286, 295, 1967
PspPPI	RGGWCCY	2 cut(s)	235, 1967
PstI	CTGCAG	2 cut(s)	897, 1186
PsuI	RGATCY	4 cut(s)	985, 1363, 1850, 2143
RsaI	GTAC	5 cut(s)	134, 859, 949, 1033, 1530
RsaNI	GTAC	5 cut(s)	133, 858, 948, 1032, 1529
RseI	CAYNNNNRTG	4 cut(s)	531, 1158, 1569, 2410
SacI	GAGCTC	4 cut(s)	53, 123, 162, 2081
SapI	GCTCTTC	1 cut(s)	167
Sau3AI	GATC	7 cut(s)	178, 985, 1267, 1363, 1468, 1850, 2143
Sau96I	GGNCC	4 cut(s)	235, 286, 295, 1967
ScaI	AGTACT	1 cut(s)	949
SchI	GAGTC	2 cut(s)	1484, 1976
ScrFI	CCNGG	6 cut(s)	101, 248, 284, 479, 1193, 1545
SduI	GDGCHC	7 cut(s)	53, 123, 162, 613, 1276, 1619, 2081
SfaNI	GCATC	6 cut(s)	564, 763, 1210, 1825, 1906, 2074
SfcI	CTRYAG	3 cut(s)	578, 893, 1182
SfiI	GGCCNNNNNGGCC	1 cut(s)	293
SfoI	GGCGCC	1 cut(s)	211
Sfr274I	CTCGAG	1 cut(s)	2346
SinI	GGWCC	2 cut(s)	235, 1967
SlaI	CTCGAG	1 cut(s)	2346
SmiMI	CAYNNNNRTG	4 cut(s)	531, 1158, 1569, 2410
SmlI	CTYRAG	2 cut(s)	375, 2346
SmoI	CTYRAG	2 cut(s)	375, 2346
SseBI	AGGCCT	2 cut(s)	1196, 2274
SsiI	CCGC	3 cut(s)	207, 336, 1769
SspDI	GGCGCC	1 cut(s)	209
SspMI	CTAG	5 cut(s)	428, 584, 815, 867, 2241
SstI	GAGCTC	4 cut(s)	53, 123, 162, 2081
StuI	AGGCCT	2 cut(s)	1196, 2274
StyD4I	CCNGG	6 cut(s)	99, 246, 282, 477, 1191, 1543
StyI	CCWWGG	2 cut(s)	231, 2184
TaaI	ACNGT	2 cut(s)	226, 1736
TaiI	ACGT	2 cut(s)	270, 628
TaqI	TCGA	4 cut(s)	704, 1084, 1985, 2347
TaqII	GACCGA	1 cut(s)	131
TatI	WGTACW	4 cut(s)	132, 947, 1031, 1528
TauI	GCSGC	1 cut(s)	210
TfiI	GAWTC	3 cut(s)	186, 544, 2107
TscAI	CASTG	7 cut(s)	17, 1174, 1404, 1624, 1645, 1675, 1741
TseFI	GTSAC	3 cut(s)	196, 268, 1165
Tsp45I	GTSAC	3 cut(s)	196, 268, 1165
TspGWI	ACGGA	1 cut(s)	184
TspRI	CASTG	7 cut(s)	17, 1174, 1404, 1624, 1645, 1675, 1741
Van91I	CCANNNNNTGG	1 cut(s)	1207
VneI	GTGCAC	1 cut(s)	1272
VpaK11BI	GGWCC	2 cut(s)	235, 1967
VspI	ATTAAT	1 cut(s)	822
XapI	RAATTY	6 cut(s)	995, 1256, 1317, 1820, 1886, 2386
XceI	RCATGY	3 cut(s)	371, 690, 1487
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1960
XhoI	CTCGAG	1 cut(s)	2346
XmnI	GAANNNNTTC	1 cut(s)	1010
XspI	CTAG	5 cut(s)	428, 584, 815, 867, 2241
ZrmI	AGTACT	1 cut(s)	949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.