Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002761

Physical Location & Seq

Genomic Coordinates Reverse (-)

4572304 .. 4576711

Gene Structure 4408 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G13350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

ATGGTGAGTGACAAGCATGTAGAATCAAACCACCGCAAACACCGACGGTCGTTTTCGCCGTCCGACGAGGTCTTTAAATCTCCGAAGCGGCACAAGTCCCGTCATCACCATCGCAGGCATGGCCACCGTCATCATCGTGATGAGGAAGTTCAATATAACGATGATGAGAATGTTAACGGTGGTGATCTTGATATGGAAGAAGGTGAGATATTAGGAAAAGAAGGGATTGGGGAGACATTGAAGAAGAAATTAGAGTCCGTCGACGAGTTTGGGGATATAAAATCTGGTCAATTCCGGGAGAATAATCTGGGGAGAAATCAGCGGAGGGAAAGAGAATGTGAGAAAAGAAAAGAGATAGAGCCTGACCGTGAAAGGAGAAAAGAGAGGGGAAGCGTTGATAGAGATAGCAGGGGAGACAGGGAAAAAGATTACCTACGGGATAGAGACAACGACAGAGGTAGGAGTAGAGATAAAGCCAGGTATAGTAGTAGAGAGAGGGGGAGGGAGAATGAAAGAGAGAGACGGAGTGAAAAAGATAGGGATAAAGGACGAGAATTCCAGAGTGATAGAGAGAAGCATAAAAGTCTTGATGATGGATATGGTGAAGTGAGGCATAAACATTCTGGACACTCAAGACATGATGCGGAAGATGACTTAGAGTTAAGAAGCCCAACTTCTGTAAATGGCCATGATCCTAACAGTGGCGATGTCAAAGAAACTCGGGGAAATGTTGAAAGGACCAGAATTGATAATGATGATAAAGGTGACGTTGTTGTTTGGGAAGTTGAACAAGAAGATGAAGAGCTAAATTTAATCGAGGAAAGCAGGAGGAGAACGCAAGCCATAATGGAGAAATATAAGAAAAAGTTGGAGCAGCAAAACGGATTTTCTTCTCATGATCTTGAGCTAGCAAACATTCCCAAGCAGTCCTCTACTGTGGCAGATGTTCTTGGAAGTGGTACTCTGGGGCCTGTTACTTCTGCAGTTAATCAAGCTAAAGCTGGGTTGGATATTGATGCCGTAGATGGTGAAGTCGCCAAGCTTTCATCGGCAGTTGGGGAATCACCTGCACAGCTTGTAATTTCAGACTCAGATAGGACACTAGCTTCCACAGGGCTTGGGGAAGGCAGCCCAAAGGATAAAATATCAGATGACATGTTCACTGATGATATCTTTGGGGAGTCTCCAGCTGATAGTCAGAAAATGGGCTATCTGCGAGGGAAAGGGAATGGCATTCCTATTGTAAGGAGTGGACTCGACGATAATTGGGATGATGCAGAAGGTTATTACAGTTATCAATTAGGGGAACTACTTGATGATAGATATGAAATCATGGCTACTCATGGAAAAGGTGTCTTCTCTACCGTGGTGCGGGCAAAAGACACAAAAGCTGAACTAGGTGAACCTGAGGAAGTGGCTATAAAAATTATTCGGAACAATGAGACAATGCATAAGGCCGGCCAGACTGAGATTCAGATATTGAAGAAGCTAGCTGGCTCTGACCCAGAGAATAAGCGCCACTGCGTTCGTTTTCTTTCAACTTTTAAGTATAGGAACCACCTTTGCTTGGTGTTTGAGTCTCTTCATCTGAATCTCCGTGAGATTGTGAAGAAGTATGGTCGCAACATTGGTATTCAACTATCTGGTGTTAGAGTGTATGCAACGCAGTTATTCATATCCCTTAAACATCTCAAGAACTGTGGGGTTCTTCACTGCGATATAAAGCCTGACAACATGCTGGTGAATGAGGGAAGAAACACGTTAAAGCTTTGTGACTTTGGTAGTGCAATGTTTGCTGGTACAAACGAAGTTACACCATATCTTGTTAGTCGCTTCTACAGAGCTCCAGAAATAATTCTTGGACTTCCCTACGACCATCCGTTAGATATATGGTCAGTTGGTTGCTGTCTGTATGAGCTTTTTAGCGGGAAAATTATGTTCCCTGGCTCCACAAACAATGAAATGTTACGCCTGCATATGGAACTGAAAGGTGCCTTCCCTAAAAAGATGCTTCGCAAGGGAGCATTTATCGATCAGCACTTTGATAAGGACTTATGCTTCTATGCTACAGAGGAGGATAGTGTTACTAGAAAGACAACAAAGAGAATGATGGTAAACATAAAGCCAAAAGAATTTGGTTCAGTAATTAAACAACGTTATAAGGATGAAGATAGCAAGTTGTTGGTTCATTTCAGGGATCTTCTAGACAGAATTTTCATACTTGATCCTCAGAAGAGAATTACAGTGTCACAGGCATTAGCTCACCCATTCATCACGGGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase TBPIP

Protein Analysis

761

Amino Acids

87.18

Weight (kDa)

6.69

Isoelectric Point (pI)

42.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	442 - 758	1.1e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	446 - 658	6.2e-20	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13350 AT1G13350 AT1G13350 AT3G25840 AT3G25840 AT3G53640
fragaria_vesca	FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640
malus_domestica	MD13G1043800.v1.1 MD16G1044600.v1.1
prunus_persica	Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1
pyrus_communis	pycom16g03900
rosa_chinensis	RchiOBHm_Chr4g0435481
rosa_laevigata	RLG00000006589
rosa_multiflora	Rmu_sc0001940.1_g000027
rosa_roxburghii	Rroxscaffold_5G00376710
rosa_rugosa	Rorug04G0285400 Rorug04G0285500
rosa_samantha	Rh4AG341100 Rh4BG349300 Rh4CG364000 Rh4DG343600
rosa_wichuraiana	Rw4G029760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2160
AarI	CACCTGC	1 cut(s)	1075
Acc36I	ACCTGC	1 cut(s)	1075
AccB1I	GGYRCC	1 cut(s)	1991
AccI	GTMKAC	1 cut(s)	261
AciI	CCGC	6 cut(s)	34, 88, 322, 644, 1372, 1926
AclI	AACGTT	1 cut(s)	2155
AclWI	GGATC	3 cut(s)	686, 2205, 2219
AcoI	YGGCCR	3 cut(s)	121, 685, 1459
AcsI	RAATTY	4 cut(s)	554, 808, 2132, 2211
AfaI	GTAC	2 cut(s)	961, 1801
AfiI	CCNNNNNNNGG	4 cut(s)	701, 1371, 1567, 1978
AflIII	ACRYGT	2 cut(s)	1155, 1758
AgsI	TTSAA	7 cut(s)	152, 241, 734, 788, 1483, 1539, 1637
AjnI	CCWGG	2 cut(s)	476, 1942
AjuI	GAANNNNNNNTTGG	2 cut(s)	1842, 1874
Alw21I	GWGCWC	1 cut(s)	1846
Alw26I	GTCTC	7 cut(s)	227, 408, 438, 514, 1188, 1436, 1584
AlwI	GGATC	3 cut(s)	686, 2205, 2219
Ama87I	CYCGRG	1 cut(s)	720
AoxI	GGCC	5 cut(s)	121, 685, 968, 1455, 1459
ApeKI	GCWGC	2 cut(s)	874, 1128
ApoI	RAATTY	4 cut(s)	554, 808, 2132, 2211
Asp700I	GAANNNNTTC	1 cut(s)	1854
AspLEI	GCGC	1 cut(s)	1518
AspS9I	GGNCC	2 cut(s)	738, 968
AsuC2I	CCSGG	1 cut(s)	296
AsuNHI	GCTAGC	2 cut(s)	907, 1489
AvaI	CYCGRG	1 cut(s)	720
AvaII	GGWCC	1 cut(s)	738
AxyI	CCTNAGG	1 cut(s)	1407
BalI	TGGCCA	2 cut(s)	123, 687
BanI	GGYRCC	1 cut(s)	1991
BanII	GRGCYC	1 cut(s)	1846
BbsI	GAAGAC	1 cut(s)	1348
Bbv12I	GWGCWC	1 cut(s)	1846
BbvI	GCAGC	2 cut(s)	886, 1140
BccI	CCATC	5 cut(s)	117, 587, 1019, 1884, 2104
BceAI	ACGGC	2 cut(s)	43, 1004
BciT130I	CCWGG	2 cut(s)	478, 1944
BcnI	CCSGG	1 cut(s)	296
BcoDI	GTCTC	7 cut(s)	227, 408, 438, 514, 1188, 1436, 1584
BfaI	CTAG	6 cut(s)	908, 1103, 1397, 1490, 2088, 2204
BfmI	CTRYAG	3 cut(s)	981, 1837, 2067
BfoI	RGCGCY	1 cut(s)	1519
BfuAI	ACCTGC	1 cut(s)	1075
BisI	GCNGC	3 cut(s)	89, 875, 1129
BlsI	GCNGC	3 cut(s)	90, 876, 1130
Bme1390I	CCNGG	3 cut(s)	296, 478, 1944
Bme18I	GGWCC	1 cut(s)	738
BmeT110I	CYCGRG	1 cut(s)	720
BmgT120I	GGNCC	2 cut(s)	738, 968
BmiI	GGNNCC	4 cut(s)	969, 1556, 1948, 1993
BmrFI	CCNGG	3 cut(s)	296, 478, 1944
BmsI	GCATC	4 cut(s)	631, 1006, 1264, 1998
BmtI	GCTAGC	2 cut(s)	911, 1493
BpiI	GAAGAC	1 cut(s)	1348
BpmI	CTGGAG	2 cut(s)	1170, 1830
BpuEI	CTTGAG	3 cut(s)	616, 923, 1676
BpuMI	CCSGG	1 cut(s)	296
Bsa29I	ATCGAT	1 cut(s)	2031
BsaJI	CCNNGG	2 cut(s)	1365, 1942
Bsc4I	CCNNNNNNNGG	4 cut(s)	701, 1371, 1567, 1978
Bse118I	RCCGGY	1 cut(s)	1457
Bse21I	CCTNAGG	1 cut(s)	1407
Bse3DI	GCAATG	1 cut(s)	1794
BseBI	CCWGG	2 cut(s)	478, 1944
BseCI	ATCGAT	1 cut(s)	2031
BseDI	CCNNGG	2 cut(s)	1365, 1942
BseGI	GGATG	3 cut(s)	1276, 1876, 2170
BseLI	CCNNNNNNNGG	4 cut(s)	701, 1371, 1567, 1978
BseMI	GCAATG	1 cut(s)	1794
BseMII	CTCAG	4 cut(s)	1104, 1398, 1458, 2243
BseRI	GAGGAG	2 cut(s)	844, 2087
BseXI	GCAGC	2 cut(s)	886, 1140
BseYI	CCCAGC	1 cut(s)	1001
BsgI	GTGCAG	1 cut(s)	1053
Bsh1285I	CGRYCG	1 cut(s)	50
BshFI	GGCC	5 cut(s)	123, 687, 970, 1457, 1461
BshNI	GGYRCC	1 cut(s)	1991
BshVI	ATCGAT	1 cut(s)	2031
BsiEI	CGRYCG	1 cut(s)	50
BsiHKAI	GWGCWC	1 cut(s)	1846
BsiHKCI	CYCGRG	1 cut(s)	720
BsiSI	CCGG	2 cut(s)	295, 1458
BslFI	GGGAC	1 cut(s)	82
BslI	CCNNNNNNNGG	4 cut(s)	701, 1371, 1567, 1978
BsmAI	GTCTC	7 cut(s)	227, 408, 438, 514, 1188, 1436, 1584
BsmBI	CGTCTC	1 cut(s)	514
BsmFI	GGGAC	1 cut(s)	82
BsmI	GAATGC	1 cut(s)	1233
BsnI	GGCC	5 cut(s)	123, 687, 970, 1457, 1461
BsoBI	CYCGRG	1 cut(s)	720
Bsp1286I	GDGCHC	1 cut(s)	1846
Bsp143I	GATC	6 cut(s)	184, 691, 898, 2032, 2197, 2224
BspACI	CCGC	6 cut(s)	34, 88, 322, 644, 1372, 1926
BspANI	GGCC	5 cut(s)	123, 687, 970, 1457, 1461
BspCNI	CTCAG	4 cut(s)	1103, 1399, 1459, 2242
BspDI	ATCGAT	1 cut(s)	2031
BspHI	TCATGA	1 cut(s)	895
BspLI	GGNNCC	4 cut(s)	969, 1556, 1948, 1993
BspMAI	CTGCAG	1 cut(s)	985
BspMI	ACCTGC	1 cut(s)	1075
BspOI	GCTAGC	2 cut(s)	911, 1493
BspPI	GGATC	3 cut(s)	686, 2205, 2219
BspQI	GCTCTTC	1 cut(s)	795
BspT107I	GGYRCC	1 cut(s)	1991
BsrDI	GCAATG	1 cut(s)	1794
BsrFI	RCCGGY	1 cut(s)	1457
BssAI	RCCGGY	1 cut(s)	1457
BssECI	CCNNGG	2 cut(s)	1365, 1942
BssMI	GATC	6 cut(s)	184, 691, 898, 2032, 2197, 2224
Bst2UI	CCWGG	2 cut(s)	478, 1944
Bst6I	CTCTTC	3 cut(s)	795, 1587, 2228
BstAPI	GCANNNNNTGC	1 cut(s)	1793
BstC8I	GCNNGC	8 cut(s)	116, 840, 909, 1374, 1459, 1491, 1495, 1973
BstDEI	CTNAG	5 cut(s)	655, 1090, 1407, 1467, 2229
BstDSI	CCRYGG	1 cut(s)	1365
BstF5I	GGATG	3 cut(s)	1276, 1876, 2170
BstH2I	RGCGCY	1 cut(s)	1519
BstHHI	GCGC	1 cut(s)	1518
BstKTI	GATC	6 cut(s)	187, 694, 901, 2035, 2200, 2227
BstMAI	GTCTC	7 cut(s)	227, 408, 438, 514, 1188, 1436, 1584
BstMBI	GATC	6 cut(s)	184, 691, 898, 2032, 2197, 2224
BstMCI	CGRYCG	1 cut(s)	50
BstMWI	GCNNNNNNNGC	2 cut(s)	120, 1793
BstNI	CCWGG	2 cut(s)	478, 1944
BstNSI	RCATGY	3 cut(s)	20, 1159, 1738
BstSCI	CCNGG	3 cut(s)	294, 476, 1942
BstSFI	CTRYAG	3 cut(s)	981, 1837, 2067
BstV1I	GCAGC	2 cut(s)	886, 1140
BstV2I	GAAGAC	1 cut(s)	1348
BstX2I	RGATCY	1 cut(s)	2197
BstYI	RGATCY	1 cut(s)	2197
Bsu15I	ATCGAT	1 cut(s)	2031
Bsu36I	CCTNAGG	1 cut(s)	1407
BsuRI	GGCC	5 cut(s)	123, 687, 970, 1457, 1461
BsuTUI	ATCGAT	1 cut(s)	2031
BtgI	CCRYGG	1 cut(s)	1365
BtgZI	GCGATG	2 cut(s)	95, 720
BtsCI	GGATG	3 cut(s)	1276, 1876, 2170
BtsI	GCAGTG	2 cut(s)	1519, 1711
BtsIMutI	CAGTG	5 cut(s)	706, 1161, 1519, 1711, 2250
BveI	ACCTGC	1 cut(s)	1075
Cac8I	GCNNGC	8 cut(s)	116, 840, 909, 1374, 1459, 1491, 1495, 1973
CciI	TCATGA	1 cut(s)	895
CfoI	GCGC	1 cut(s)	1518
Cfr10I	RCCGGY	1 cut(s)	1457
Cfr13I	GGNCC	2 cut(s)	738, 968
ClaI	ATCGAT	1 cut(s)	2031
Csp6I	GTAC	2 cut(s)	960, 1800
CspCI	CAANNNNNGTGG	4 cut(s)	1099, 1134, 1681, 1716
CviAII	CATG	9 cut(s)	17, 119, 638, 689, 896, 1156, 1333, 1343, 1735
CviQI	GTAC	2 cut(s)	960, 1800
DdeI	CTNAG	5 cut(s)	655, 1090, 1407, 1467, 2229
DpnI	GATC	6 cut(s)	186, 693, 900, 2034, 2199, 2226
DpnII	GATC	6 cut(s)	184, 691, 898, 2032, 2197, 2224
DraI	TTTAAA	1 cut(s)	76
EaeI	YGGCCR	3 cut(s)	121, 685, 1459
Eam1104I	CTCTTC	3 cut(s)	795, 1587, 2228
EarI	CTCTTC	3 cut(s)	795, 1587, 2228
Ecl136II	GAGCTC	1 cut(s)	1844
Eco24I	GRGCYC	1 cut(s)	1846
Eco32I	GATATC	1 cut(s)	1171
Eco47I	GGWCC	1 cut(s)	738
Eco53kI	GAGCTC	1 cut(s)	1844
Eco81I	CCTNAGG	1 cut(s)	1407
Eco88I	CYCGRG	1 cut(s)	720
EcoICRI	GAGCTC	1 cut(s)	1844
EcoO109I	RGGNCCY	1 cut(s)	968
EcoRI	GAATTC	1 cut(s)	554
EcoRII	CCWGG	2 cut(s)	476, 1942
EcoRV	GATATC	1 cut(s)	1171
EcoT22I	ATGCAT	1 cut(s)	1452
EcoT38I	GRGCYC	1 cut(s)	1846
Esp3I	CGTCTC	1 cut(s)	514
FaeI	CATG	9 cut(s)	20, 122, 641, 692, 899, 1159, 1336, 1346, 1738
FalI	AAGNNNNNCTT	2 cut(s)	658, 690
FaqI	GGGAC	1 cut(s)	82
FatI	CATG	9 cut(s)	16, 118, 637, 688, 895, 1155, 1332, 1342, 1734
FauI	CCCGC	2 cut(s)	1365, 1919
FauNDI	CATATG	1 cut(s)	1977
FblI	GTMKAC	1 cut(s)	261
Fnu4HI	GCNGC	3 cut(s)	89, 875, 1129
FokI	GGATG	3 cut(s)	1283, 1863, 2177
FriOI	GRGCYC	1 cut(s)	1846
FseI	GGCCGGCC	1 cut(s)	1461
Fsp4HI	GCNGC	3 cut(s)	89, 875, 1129
FspBI	CTAG	6 cut(s)	908, 1103, 1397, 1490, 2088, 2204
GlaI	GCGC	1 cut(s)	1517
GluI	GCNGC	3 cut(s)	89, 875, 1129
GsaI	CCCAGC	1 cut(s)	1005
GsuI	CTGGAG	2 cut(s)	1170, 1830
HaeII	RGCGCY	1 cut(s)	1519
HaeIII	GGCC	5 cut(s)	123, 687, 970, 1457, 1461
HapII	CCGG	2 cut(s)	295, 1458
HhaI	GCGC	1 cut(s)	1518
Hin1II	CATG	9 cut(s)	20, 122, 641, 692, 899, 1159, 1336, 1346, 1738
Hin6I	GCGC	1 cut(s)	1516
HinP1I	GCGC	1 cut(s)	1516
HincII	GTYRAC	2 cut(s)	175, 262
HindII	GTYRAC	2 cut(s)	175, 262
HindIII	AAGCTT	2 cut(s)	1040, 1766
HinfI	GANTC	9 cut(s)	23, 254, 1061, 1088, 1181, 1254, 1471, 1577, 1591
HpaI	GTTAAC	1 cut(s)	175
HpaII	CCGG	2 cut(s)	295, 1458
Hpy166II	GTNNAC	6 cut(s)	175, 262, 1161, 1253, 1403, 2116
Hpy8I	GTNNAC	6 cut(s)	175, 262, 1161, 1253, 1403, 2116
Hpy99I	CGWCG	5 cut(s)	48, 68, 263, 266, 1262
HpyAV	CCTTC	5 cut(s)	194, 215, 1118, 1274, 2005
HpyCH4IV	ACGT	3 cut(s)	768, 1760, 2155
HpyCH4V	TGCA	7 cut(s)	983, 1070, 1277, 1450, 1661, 1787, 1975
HpyF10VI	GCNNNNNNNGC	2 cut(s)	120, 1793
HpyF3I	CTNAG	5 cut(s)	655, 1090, 1407, 1467, 2229
HpySE526I	ACGT	3 cut(s)	768, 1760, 2155
Hsp92II	CATG	9 cut(s)	20, 122, 641, 692, 899, 1159, 1336, 1346, 1738
HspAI	GCGC	1 cut(s)	1516
KroI	GCCGGC	1 cut(s)	1457
KroNI	GCCGGC	1 cut(s)	1459
KspAI	GTTAAC	1 cut(s)	175
Kzo9I	GATC	6 cut(s)	184, 691, 898, 2032, 2197, 2224
LguI	GCTCTTC	1 cut(s)	795
LmnI	GCTCC	4 cut(s)	871, 1849, 1952, 2021
Lsp1109I	GCAGC	2 cut(s)	886, 1140
LweI	GCATC	4 cut(s)	631, 1006, 1264, 1998
MaeI	CTAG	6 cut(s)	908, 1103, 1397, 1490, 2088, 2204
MaeII	ACGT	3 cut(s)	768, 1760, 2155
MaeIII	GTNAC	8 cut(s)	8, 764, 973, 1772, 1810, 1965, 2083, 2247
MalI	GATC	6 cut(s)	186, 693, 900, 2034, 2199, 2226
MboI	GATC	6 cut(s)	184, 691, 898, 2032, 2197, 2224
MflI	RGATCY	1 cut(s)	2197
MhlI	GDGCHC	1 cut(s)	1846
MlsI	TGGCCA	2 cut(s)	123, 687
MluNI	TGGCCA	2 cut(s)	123, 687
MlyI	GAGTC	5 cut(s)	263, 1082, 1190, 1248, 1586
MmeI	TCCRAC	3 cut(s)	87, 849, 987
Mox20I	TGGCCA	2 cut(s)	123, 687
Mph1103I	ATGCAT	1 cut(s)	1452
MroNI	GCCGGC	1 cut(s)	1457
MroXI	GAANNNNTTC	1 cut(s)	1854
MscI	TGGCCA	2 cut(s)	123, 687
MseI	TTAA	9 cut(s)	75, 174, 662, 812, 987, 1545, 1683, 1763, 2148
MslI	CAYNNNNRTG	3 cut(s)	135, 138, 1739
Msp20I	TGGCCA	2 cut(s)	123, 687
MspA1I	CMGCKG	2 cut(s)	322, 1190
MspI	CCGG	2 cut(s)	295, 1458
MspR9I	CCNGG	3 cut(s)	296, 478, 1944
Mva1269I	GAATGC	1 cut(s)	1233
MvaI	CCWGG	2 cut(s)	478, 1944
MwoI	GCNNNNNNNGC	2 cut(s)	120, 1793
NaeI	GCCGGC	1 cut(s)	1459
NciI	CCSGG	1 cut(s)	296
NdeI	CATATG	1 cut(s)	1977
NdeII	GATC	6 cut(s)	184, 691, 898, 2032, 2197, 2224
NgoMIV	GCCGGC	1 cut(s)	1457
NheI	GCTAGC	2 cut(s)	907, 1489
NlaIII	CATG	9 cut(s)	20, 122, 641, 692, 899, 1159, 1336, 1346, 1738
NlaIV	GGNNCC	4 cut(s)	969, 1556, 1948, 1993
NmuCI	GTSAC	4 cut(s)	8, 764, 1772, 2247
NsiI	ATGCAT	1 cut(s)	1452
NspI	RCATGY	3 cut(s)	20, 1159, 1738
PagI	TCATGA	1 cut(s)	895
PaqCI	CACCTGC	1 cut(s)	1075
PciI	ACATGT	1 cut(s)	1155
PciSI	GCTCTTC	1 cut(s)	795
PcsI	WCGNNNNNNNCGW	1 cut(s)	56
PctI	GAATGC	1 cut(s)	1233
PdiI	GCCGGC	1 cut(s)	1459
PdmI	GAANNNNTTC	1 cut(s)	1854
PfeI	GAWTC	4 cut(s)	23, 1061, 1471, 1591
PflFI	GACNNNGTC	1 cut(s)	68
PfoI	TCCNGGA	1 cut(s)	294
PkrI	GCNGC	3 cut(s)	90, 876, 1130
PleI	GAGTC	5 cut(s)	262, 1082, 1189, 1248, 1585
PpsI	GAGTC	5 cut(s)	262, 1082, 1189, 1248, 1585
PscI	ACATGT	1 cut(s)	1155
PsiI	TTATAA	1 cut(s)	2160
Psp124BI	GAGCTC	1 cut(s)	1846
Psp1406I	AACGTT	1 cut(s)	2155
Psp6I	CCWGG	2 cut(s)	476, 1942
PspFI	CCCAGC	1 cut(s)	1001
PspGI	CCWGG	2 cut(s)	476, 1942
PspN4I	GGNNCC	4 cut(s)	969, 1556, 1948, 1993
PspPI	GGNCC	2 cut(s)	738, 968
PstI	CTGCAG	1 cut(s)	985
PsuI	RGATCY	1 cut(s)	2197
PsyI	GACNNNGTC	1 cut(s)	68
PvuII	CAGCTG	1 cut(s)	1190
RigI	GGCCGGCC	1 cut(s)	1461
RsaI	GTAC	2 cut(s)	961, 1801
RsaNI	GTAC	2 cut(s)	960, 1800
RseI	CAYNNNNRTG	3 cut(s)	135, 138, 1739
SacI	GAGCTC	1 cut(s)	1846
SalI	GTCGAC	1 cut(s)	260
SapI	GCTCTTC	1 cut(s)	795
SaqAI	TTAA	9 cut(s)	75, 174, 662, 812, 987, 1545, 1683, 1763, 2148
SatI	GCNGC	3 cut(s)	89, 875, 1129
Sau3AI	GATC	6 cut(s)	184, 691, 898, 2032, 2197, 2224
Sau96I	GGNCC	2 cut(s)	738, 968
SchI	GAGTC	5 cut(s)	263, 1082, 1190, 1248, 1586
ScrFI	CCNGG	3 cut(s)	296, 478, 1944
SduI	GDGCHC	1 cut(s)	1846
SfaNI	GCATC	4 cut(s)	631, 1006, 1264, 1998
SfcI	CTRYAG	3 cut(s)	981, 1837, 2067
SgrDI	CGTCGACG	1 cut(s)	260
SinI	GGWCC	1 cut(s)	738
SmiMI	CAYNNNNRTG	3 cut(s)	135, 138, 1739
SmlI	CTYRAG	3 cut(s)	631, 902, 1691
SmoI	CTYRAG	3 cut(s)	631, 902, 1691
SsiI	CCGC	6 cut(s)	34, 88, 322, 644, 1372, 1926
SspMI	CTAG	6 cut(s)	908, 1103, 1397, 1490, 2088, 2204
SstI	GAGCTC	1 cut(s)	1846
StyD4I	CCNGG	3 cut(s)	294, 476, 1942
TaiI	ACGT	3 cut(s)	771, 1763, 2158
TaqI	TCGA	4 cut(s)	261, 816, 1257, 2031
TauI	GCSGC	1 cut(s)	91
TfiI	GAWTC	4 cut(s)	23, 1061, 1471, 1591
Tru1I	TTAA	9 cut(s)	75, 174, 662, 812, 987, 1545, 1683, 1763, 2148
Tru9I	TTAA	9 cut(s)	75, 174, 662, 812, 987, 1545, 1683, 1763, 2148
TscAI	CASTG	5 cut(s)	706, 1168, 1526, 1718, 2250
TseFI	GTSAC	4 cut(s)	8, 764, 1772, 2247
TseI	GCWGC	2 cut(s)	874, 1128
Tsp45I	GTSAC	4 cut(s)	8, 764, 1772, 2247
TspGWI	ACGGA	5 cut(s)	247, 538, 897, 1586, 1869
TspRI	CASTG	5 cut(s)	706, 1168, 1526, 1718, 2250
Tth111I	GACNNNGTC	1 cut(s)	68
VpaK11BI	GGWCC	1 cut(s)	738
XapI	RAATTY	4 cut(s)	554, 808, 2132, 2211
XbaI	TCTAGA	1 cut(s)	2203
XceI	RCATGY	3 cut(s)	20, 1159, 1738
XcmI	CCANNNNNNNNNTGG	1 cut(s)	116
XmiI	GTMKAC	1 cut(s)	261
XmnI	GAANNNNTTC	1 cut(s)	1854
XspI	CTAG	6 cut(s)	908, 1103, 1397, 1490, 2088, 2204
Zsp2I	ATGCAT	1 cut(s)	1452

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.