Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0002761

Physical Location & Seq

Genomic Coordinates Forward (+)

3056203 .. 3064063

Gene Structure 7861 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1043800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3093 bp

ATGGCCAGCGACGCCCAGGACTCACATCGCAAGCACCGCCGGGCCTCTTCCGACGACGACGAGGCCGTCGAGAAGTCGTCCAAGCGCCACAAGCACAGACACCACCGCCGCCACCACCGTCACCGTCACGGGAGCAAAAAGCGCGAAGAGGAGACCAAGACCGTCGTCGACGATGTCGAAGCTCCTCCATCGCCGCCTGTTAAGTTATCTGATTCCGGTGTCAATGGTTCTATGCCTGTTGAAGACGTGGAGGAAGGCGAAATTCTCGACGAGGAGGGTGTCGGTGGTCGGGACGACGGCGTTTTGAAGACGACAGCGGGCTCTGATGCAGAGTCTGGTGAAATTGAGGCTCCTGGAGTCGGCGATCATTCTAATAAGCGGAATCTGAGAGACAATGACATTGATAAAAATACAAAAACTGGGGTAGACCTCAGTGGTGATGATGATACCAGCGGTCATGTTGTTGGTAAGTCTTGGAATGAGGCTAGTTTGCCTAGAGATTCTAGTGTTGAGCCTCAAGATGAATTAGTTTCCAGTGGTAGTGTAAAGGATGATGCCAATGGAGACTTGGCTTTTCACAAAGAGGAGAAGAGGCGACACAGGGAGTTTGGGTCCCCTTCTAGAGGAAGTGATAAGCTAAAGAATTACTATGATGATGAAAAAGAAGACAGGGGTAAATTAGCATATCGAAAAAAGGCGTCATCTGGAAGTAGTGGGGACAAATACAATACCTTGGTGCGCTCACCATCTGGTGATAGGCGCGGTGATGAGCTGCACGGTAGGAGCAGATCAAGGTCATACGATCCTGTGAGGGAGAGATCTCGCTCCCGTAGTGTAATAGAAGAAGAGTCTCTTTCGAAAAGGAGATGTTATCATGAACGGGACAGCTCAATATATGTTCAGAAAAGCAAGGCTGTGCGCGGCTCTGATGATGAAGGAATGGCTCGGGGTATTGACAGTGTTGATCCGATGAGGGATGATGAAAGGGAACACAATATTAGGTATAGCAGATACTCTGGATTAGGTCGTAGTCGAGAAAGAGAGAGAAGTAGGGAGAGGGAGGCGGATCAGGAACGGAGAAGGGAGAAAGATCAAGAAAGAATCAGGGACAGGGAACGGAGAAGGGAGAAAGAAAGAGAAAGGAGTAGTGACAGGAAAAGAGGAATAGGACGAGACCATAGCAGGGAAAGAGTGGTTGATATGGAAAGGAGAAGGGAAGAGCGGCATAGGAGCAGGGACAGGAATAGGGATGATAATAATAGGAGCAGGGACAGGGTCAAGGATGATAGGGACAGAAATATGGAGAGGGGCCGAGATAGGGACAGAATTACAGACCGAAAATGGGAGCGGCGAGATGATAGAGACTGGGATAGGGGTCGAGCTATGGAGAGGGAGAAATATGAAAATCATGAGGATAGCTATGGAAATCGAGATAGGCATAAACATTCTGCTCGATCAAGGCATGATGAAAAAGAATATGACCAGGACAGAAGAAGTAAAACTGATCCAGGAAAGGTACAGAGTCCAAAGAATTATTCTGTTGAAGGTGATGAAGGCACGAAAGAAAGAGATGAAGATGAAGAAGAAGGCATTCAAGTTGCTGGCCAGGAAGAGGATGATGTGGATAGAATAAAGGAAGAGTCTCGAAGAATAAAACAAGCCATCTTAGAAAAATATAAAAGTCAGCAGTCACAACATACAAATGAGTTGGGTCTACGAGAACAAACTGAGTCACAGTTGCAGCAGCAATTTGAGCCTCAGCCTTTGGAGCAATCAGCAGATAAAGGTCCTGCAGATCATCTGGAGCAATCAGCAGCTGCTGTCCAACCTGGTCTAGAAACTGACGATGGAAGGAGTGATGGAGATGTGTCTGTTGCTGCATTTTCTGTTTCACCTCAACAGAATGGTGCTGATACTTCTAGAATGCCTTCTGGTGCCACAGGGCTTGGAGAGGGTACTCCAGAGAGTGAAGGAGCTGTTGGCGTTGATGATATCTTTGGTGAGACCCCGGTTGGAGTACGAAAATTGGGAAAAGGAGATCATGTACGAATTGAAAGGAGTGGTCTTCATGATAACTGGGATGATGCAGAAGGGTACTACAGTCACCGTTTCGGAGAATTACTTGATGCTCGGTATGAAATCACTGCTGCTCATGGGAAGGGTGTCTTTTCAACAGTAGTCCGTGCAAAGAACCTTACAGTTGGTAATGGTGAACCTGAAGAAGTGGCAATTAAGATTATACGGAGCAATGACACTATGTTAAAGGCTGGTATGACTGAGTTGACCATATTGAAGAAATTAGCGGGTCATGATCCAGATAATAAGCGCCACTGTGTTCGTTTTCTGTCGAGTTTCAAGTATCGAAATCATCTTTGTTTAGTGTTTGAATCCCTTCATATGAATCTTCGCGAGGTCTTAAAGAAGTTTGGGCGCAATATTGGTCTTAAGCTAACTGGCGTCAGAGAATATGCTAAGCAACTTTTTATTGCACTGAAGCATTTAAAGAACTGTGGTGTCCTTCATTGTGATATAAAGCCAGATAACATGCTGGTAAATGAGTCAAAAAATGTGTTGAAGCTGTGTGATTTTGGTAATGCCATGTTCGCTGGAAAGAATGAAGTTACACCATACCTCGTCAGCCGCTTTTATCGTGCTCCTGAAATAATTCTTGGCTTGCCTTATGATCATCCACTGGATATCTGGTCAGTTGGATGCTGTTTGTACGAACTTTATACAGGAAAAGTTCTTTTTCCCGGTGCTACAAACAACGATATGCTACGTCTTCACATGGAACTGAAAGGCCCTTTCCCAAAGAAGATGCTTCGGAAGAAGGGAGCTTTTACACATCAACATTTTGATCAGGATCTGAACTTCCATGCTACAGAAGATGATCCTGTTACAAAGAAGGCAATCAATCGGGTGATTTTTAATATAAGGCCAAAAGATATTGGATCACTTATTACGGGTTCTGGTGAGAATGCAAAGATGCTAGCTGATTTTAAAGATCTTTTAGATAAAATGTTTGTATTGGATCCAGAGAAGAGGTTGACAGTATCACAAGCTTTGAACCATCTATTCATCACTGGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016310 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase TBPIP

Protein Analysis

1031

Amino Acids

117.87

Weight (kDa)

6.69

Isoelectric Point (pI)

54.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	713 - 1027	1.1e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	718 - 928	1.5e-20	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13350 AT1G13350 AT1G13350 AT3G25840 AT3G25840 AT3G53640
fragaria_vesca	FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640
malus_domestica	MD13G1043800.v1.1 MD16G1044600.v1.1
prunus_persica	Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1
pyrus_communis	pycom16g03900
rosa_chinensis	RchiOBHm_Chr4g0435481
rosa_laevigata	RLG00000006589
rosa_multiflora	Rmu_sc0001940.1_g000027
rosa_roxburghii	Rroxscaffold_5G00376710
rosa_rugosa	Rorug04G0285400 Rorug04G0285500
rosa_samantha	Rh4AG341100 Rh4BG349300 Rh4CG364000 Rh4DG343600
rosa_wichuraiana	Rw4G029760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	65
AccB1I	GGYRCC	1 cut(s)	1934
AccBSI	CCGCTC	2 cut(s)	1222, 1348
AccI	GTMKAC	3 cut(s)	168, 426, 1714
AccII	CGCG	4 cut(s)	144, 762, 921, 2409
AcoI	YGGCCR	2 cut(s)	3, 1603
AcsI	RAATTY	1 cut(s)	261
AcuI	CTGAAG	2 cut(s)	2238, 2513
AcyI	GRCGYC	3 cut(s)	12, 698, 2457
AfaI	GTAC	6 cut(s)	1518, 1957, 2019, 2046, 2096, 2723
AfiI	CCNNNNNNNGG	6 cut(s)	359, 623, 1183, 1318, 1342, 1612
AflII	CTTAAG	1 cut(s)	2444
AjiI	CACGTC	1 cut(s)	247
AjnI	CCWGG	6 cut(s)	15, 352, 1482, 1507, 1605, 1828
AjuI	GAANNNNNNNTTGG	6 cut(s)	1519, 1551, 1962, 1994, 2652, 2684
Alw21I	GWGCWC	1 cut(s)	2656
Alw26I	GTCTC	8 cut(s)	146, 384, 558, 855, 1167, 1356, 1647, 1997
AlwNI	CAGNNNCTG	4 cut(s)	335, 1817, 1820, 2866
Ama87I	CYCGRG	1 cut(s)	945
AoxI	GGCC	7 cut(s)	3, 42, 63, 1309, 1603, 2800, 2936
ApeKI	GCWGC	7 cut(s)	772, 1741, 1744, 1814, 1817, 1877, 2147
ApoI	RAATTY	1 cut(s)	261
Asp700I	GAANNNNTTC	4 cut(s)	1590, 1927, 2391, 2664
AspLEI	GCGC	7 cut(s)	87, 144, 741, 762, 921, 2328, 2433
AspS9I	GGNCC	5 cut(s)	42, 612, 1309, 1787, 2801
AsuC2I	CCSGG	3 cut(s)	41, 2009, 2754
AsuII	TTCGAA	1 cut(s)	857
AsuNHI	GCTAGC	1 cut(s)	2989
AvaI	CYCGRG	1 cut(s)	945
AvaII	GGWCC	2 cut(s)	612, 1787
BaeI	ACNNNNGTAYC	2 cut(s)	2086, 2119
BalI	TGGCCA	2 cut(s)	5, 1605
BamHI	GGATCC	1 cut(s)	3031
BanI	GGYRCC	1 cut(s)	1934
BanII	GRGCYC	1 cut(s)	323
BbsI	GAAGAC	5 cut(s)	249, 314, 672, 2057, 2774
Bbv12I	GWGCWC	1 cut(s)	2656
BbvCI	CCTCAGC	1 cut(s)	1758
BbvI	GCAGC	7 cut(s)	759, 1753, 1756, 1804, 1826, 1864, 2134
BccI	CCATC	6 cut(s)	196, 754, 1670, 1841, 1853, 3078
BceAI	ACGGC	2 cut(s)	50, 313
BciT130I	CCWGG	6 cut(s)	17, 354, 1484, 1509, 1607, 1830
BclI	TGATCA	2 cut(s)	2683, 2857
BcnI	CCSGG	3 cut(s)	41, 2009, 2754
BcoDI	GTCTC	8 cut(s)	146, 384, 558, 855, 1167, 1356, 1647, 1997
BfaI	CTAG	7 cut(s)	486, 495, 504, 621, 1835, 1920, 2990
BfmI	CTRYAG	3 cut(s)	1791, 2098, 2880
BfoI	RGCGCY	2 cut(s)	88, 2329
BfrI	CTTAAG	1 cut(s)	2444
BglII	AGATCT	2 cut(s)	818, 3004
BlpI	GCTNAGC	1 cut(s)	2472
Bme1390I	CCNGG	9 cut(s)	17, 41, 354, 1484, 1509, 1607, 1830, 2009, 2754
Bme18I	GGWCC	2 cut(s)	612, 1787
BmeT110I	CYCGRG	1 cut(s)	945
BmgBI	CACGTC	1 cut(s)	247
BmgT120I	GGNCC	5 cut(s)	42, 612, 1309, 1787, 2801
BmiI	GGNNCC	6 cut(s)	351, 613, 614, 1310, 1936, 3033
BmrFI	CCNGG	9 cut(s)	17, 41, 354, 1484, 1509, 1607, 1830, 2009, 2754
BmrI	ACTGGG	3 cut(s)	429, 1375, 2086
BmsI	GCATC	7 cut(s)	316, 544, 2074, 2116, 2702, 2808, 2976
BmtI	GCTAGC	1 cut(s)	2993
BmuI	ACTGGG	3 cut(s)	429, 1375, 2086
BoxI	GACNNNNGTC	1 cut(s)	164
BpiI	GAAGAC	5 cut(s)	249, 314, 672, 2057, 2774
BpmI	CTGGAG	3 cut(s)	375, 1823, 1944
Bpu10I	CCTNAGC	1 cut(s)	1758
Bpu1102I	GCTNAGC	1 cut(s)	2472
Bpu14I	TTCGAA	1 cut(s)	857
BpuEI	CTTGAG	1 cut(s)	501
BpuMI	CCSGG	3 cut(s)	41, 2009, 2754
BsaBI	GATNNNNATC	1 cut(s)	2862
BsaHI	GRCGYC	3 cut(s)	12, 698, 2457
BsaI	GGTCTC	3 cut(s)	146, 1167, 1997
BsaJI	CCNNGG	3 cut(s)	15, 732, 2007
BsaWI	WCCGGW	1 cut(s)	215
BsaXI	ACNNNNNCTCC	4 cut(s)	596, 626, 2028, 2058
Bsc4I	CCNNNNNNNGG	6 cut(s)	359, 623, 1183, 1318, 1342, 1612
Bse1I	ACTGG	7 cut(s)	424, 534, 1370, 2081, 2458, 2697, 3088
Bse3DI	GCAATG	1 cut(s)	2254
Bse8I	GATNNNNATC	1 cut(s)	2862
BseBI	CCWGG	6 cut(s)	17, 354, 1484, 1509, 1607, 1830
BseDI	CCNNGG	3 cut(s)	15, 732, 2007
BseGI	GGATG	8 cut(s)	556, 982, 1255, 1288, 1621, 2086, 2686, 2717
BseJI	GATNNNNATC	1 cut(s)	2862
BseLI	CCNNNNNNNGG	6 cut(s)	359, 623, 1183, 1318, 1342, 1612
BseMI	GCAATG	1 cut(s)	2254
BseMII	CTCAG	5 cut(s)	377, 445, 1719, 1772, 2268
BseNI	ACTGG	7 cut(s)	424, 534, 1370, 2081, 2458, 2697, 3088
BseRI	GAGGAG	4 cut(s)	164, 174, 287, 599
BseXI	GCAGC	7 cut(s)	759, 1753, 1756, 1804, 1826, 1864, 2134
BsgI	GTGCAG	1 cut(s)	758
Bsh1236I	CGCG	4 cut(s)	144, 762, 921, 2409
BshFI	GGCC	7 cut(s)	5, 44, 65, 1311, 1605, 2802, 2938
BshNI	GGYRCC	1 cut(s)	1934
BsiHKAI	GWGCWC	1 cut(s)	2656
BsiHKCI	CYCGRG	1 cut(s)	945
BsiSI	CCGG	4 cut(s)	40, 216, 2009, 2754
BslFI	GGGAC	9 cut(s)	305, 598, 731, 896, 1121, 1250, 1283, 1304, 1334
BslI	CCNNNNNNNGG	6 cut(s)	359, 623, 1183, 1318, 1342, 1612
BsmAI	GTCTC	8 cut(s)	146, 384, 558, 855, 1167, 1356, 1647, 1997
BsmFI	GGGAC	9 cut(s)	305, 598, 731, 896, 1121, 1250, 1283, 1304, 1334
BsmI	GAATGC	3 cut(s)	1590, 1929, 2983
BsnI	GGCC	7 cut(s)	5, 44, 65, 1311, 1605, 2802, 2938
Bso31I	GGTCTC	3 cut(s)	146, 1167, 1997
BsoBI	CYCGRG	1 cut(s)	945
Bsp119I	TTCGAA	1 cut(s)	857
Bsp1286I	GDGCHC	2 cut(s)	323, 2656
Bsp1720I	GCTNAGC	1 cut(s)	2472
Bsp68I	TCGCGA	1 cut(s)	2409
BspANI	GGCC	7 cut(s)	5, 44, 65, 1311, 1605, 2802, 2938
BspCNI	CTCAG	5 cut(s)	378, 444, 1720, 1771, 2269
BspFNI	CGCG	4 cut(s)	144, 762, 921, 2409
BspHI	TCATGA	4 cut(s)	874, 1408, 2068, 2308
BspLI	GGNNCC	6 cut(s)	351, 613, 614, 1310, 1936, 3033
BspMAI	CTGCAG	1 cut(s)	1795
BspOI	GCTAGC	1 cut(s)	2993
BspQI	GCTCTTC	1 cut(s)	1212
BspT104I	TTCGAA	1 cut(s)	857
BspT107I	GGYRCC	1 cut(s)	1934
BspTI	CTTAAG	1 cut(s)	2444
BspTNI	GGTCTC	3 cut(s)	146, 1167, 1997
BsrBI	CCGCTC	2 cut(s)	1222, 1348
BsrDI	GCAATG	1 cut(s)	2254
BsrI	ACTGG	7 cut(s)	424, 534, 1370, 2081, 2458, 2697, 3088
BssECI	CCNNGG	3 cut(s)	15, 732, 2007
BssNI	GRCGYC	3 cut(s)	12, 698, 2457
BssT1I	CCWWGG	1 cut(s)	732
Bst2UI	CCWGG	6 cut(s)	17, 354, 1484, 1509, 1607, 1830
Bst6I	CTCTTC	8 cut(s)	52, 141, 584, 840, 1212, 1605, 1632, 3035
BstACI	GRCGYC	3 cut(s)	12, 698, 2457
BstAFI	CTTAAG	1 cut(s)	2444
BstBI	TTCGAA	1 cut(s)	857
BstC8I	GCNNGC	6 cut(s)	7, 32, 319, 1603, 2675, 2991
BstDEI	CTNAG	7 cut(s)	386, 431, 1666, 1728, 1758, 2277, 2472
BstENI	CCTNNNNNAGG	1 cut(s)	621
BstF5I	GGATG	8 cut(s)	556, 982, 1255, 1288, 1621, 2086, 2686, 2717
BstFNI	CGCG	4 cut(s)	144, 762, 921, 2409
BstH2I	RGCGCY	2 cut(s)	88, 2329
BstHHI	GCGC	7 cut(s)	87, 144, 741, 762, 921, 2328, 2433
BstMAI	GTCTC	8 cut(s)	146, 384, 558, 855, 1167, 1356, 1647, 1997
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 36, 91, 141, 1753, 1768, 2603
BstNI	CCWGG	6 cut(s)	17, 354, 1484, 1509, 1607, 1830
BstNSI	RCATGY	1 cut(s)	2548
BstPAI	GACNNNNGTC	1 cut(s)	164
BstSCI	CCNGG	9 cut(s)	15, 39, 352, 1482, 1507, 1605, 1828, 2007, 2752
BstSFI	CTRYAG	3 cut(s)	1791, 2098, 2880
BstUI	CGCG	4 cut(s)	144, 762, 921, 2409
BstV1I	GCAGC	7 cut(s)	759, 1753, 1756, 1804, 1826, 1864, 2134
BstV2I	GAAGAC	5 cut(s)	249, 314, 672, 2057, 2774
BstX2I	RGATCY	4 cut(s)	818, 2863, 3004, 3031
BstYI	RGATCY	4 cut(s)	818, 2863, 3004, 3031
BsuRI	GGCC	7 cut(s)	5, 44, 65, 1311, 1605, 2802, 2938
BtgZI	GCGATG	2 cut(s)	11, 174
BtrI	CACGTC	1 cut(s)	247
BtsCI	GGATG	8 cut(s)	556, 982, 1255, 1288, 1621, 2086, 2686, 2717
BtsI	GCAGTG	1 cut(s)	2142
BtsIMutI	CAGTG	8 cut(s)	439, 541, 964, 2142, 2329, 2489, 2690, 3081
BtuMI	TCGCGA	1 cut(s)	2409
Cac8I	GCNNGC	6 cut(s)	7, 32, 319, 1603, 2675, 2991
CaiI	CAGNNNCTG	4 cut(s)	335, 1817, 1820, 2866
CciI	TCATGA	4 cut(s)	874, 1408, 2068, 2308
CfoI	GCGC	7 cut(s)	87, 144, 741, 762, 921, 2328, 2433
Cfr13I	GGNCC	5 cut(s)	42, 612, 1309, 1787, 2801
CseI	GACGC	3 cut(s)	20, 687, 2446
CsiI	ACCWGGT	1 cut(s)	1828
Csp6I	GTAC	6 cut(s)	1517, 1956, 2018, 2045, 2095, 2722
CspCI	CAANNNNNGTGG	2 cut(s)	1927, 1962
CviQI	GTAC	6 cut(s)	1517, 1956, 2018, 2045, 2095, 2722
DdeI	CTNAG	7 cut(s)	386, 431, 1666, 1728, 1758, 2277, 2472
DraI	TTTAAA	2 cut(s)	2502, 3001
DrdI	GACNNNNNNGTC	1 cut(s)	65
DseDI	GACNNNNNNGTC	1 cut(s)	65
EaeI	YGGCCR	2 cut(s)	3, 1603
Eam1104I	CTCTTC	8 cut(s)	52, 141, 584, 840, 1212, 1605, 1632, 3035
EarI	CTCTTC	8 cut(s)	52, 141, 584, 840, 1212, 1605, 1632, 3035
EciI	GGCGGA	1 cut(s)	1079
Eco130I	CCWWGG	1 cut(s)	732
Eco24I	GRGCYC	1 cut(s)	323
Eco31I	GGTCTC	3 cut(s)	146, 1167, 1997
Eco32I	GATATC	2 cut(s)	1993, 2698
Eco47I	GGWCC	2 cut(s)	612, 1787
Eco57I	CTGAAG	2 cut(s)	2238, 2513
Eco88I	CYCGRG	1 cut(s)	945
EcoNI	CCTNNNNNAGG	1 cut(s)	621
EcoO109I	RGGNCCY	3 cut(s)	612, 1787, 2801
EcoRII	CCWGG	6 cut(s)	15, 352, 1482, 1507, 1605, 1828
EcoRV	GATATC	2 cut(s)	1993, 2698
EcoT14I	CCWWGG	1 cut(s)	732
EcoT38I	GRGCYC	1 cut(s)	323
ErhI	CCWWGG	1 cut(s)	732
FalI	AAGNNNNNCTT	4 cut(s)	837, 869, 2150, 2182
FaqI	GGGAC	9 cut(s)	305, 598, 731, 896, 1121, 1250, 1283, 1304, 1334
FauI	CCCGC	2 cut(s)	310, 2296
FauNDI	CATATG	1 cut(s)	2397
FbaI	TGATCA	2 cut(s)	2683, 2857
FblI	GTMKAC	3 cut(s)	168, 426, 1714
FokI	GGATG	8 cut(s)	563, 989, 1262, 1295, 1628, 2093, 2673, 2724
FriOI	GRGCYC	1 cut(s)	323
FspBI	CTAG	7 cut(s)	486, 495, 504, 621, 1835, 1920, 2990
GlaI	GCGC	7 cut(s)	86, 143, 740, 761, 920, 2327, 2432
GsuI	CTGGAG	3 cut(s)	375, 1823, 1944
HaeII	RGCGCY	2 cut(s)	88, 2329
HaeIII	GGCC	7 cut(s)	5, 44, 65, 1311, 1605, 2802, 2938
HapII	CCGG	4 cut(s)	40, 216, 2009, 2754
HgaI	GACGC	3 cut(s)	20, 687, 2446
HhaI	GCGC	7 cut(s)	87, 144, 741, 762, 921, 2328, 2433
Hin1I	GRCGYC	3 cut(s)	12, 698, 2457
Hin6I	GCGC	7 cut(s)	85, 142, 739, 760, 919, 2326, 2431
HinP1I	GCGC	7 cut(s)	85, 142, 739, 760, 919, 2326, 2431
HincII	GTYRAC	3 cut(s)	169, 2283, 3048
HindII	GTYRAC	3 cut(s)	169, 2283, 3048
HindIII	AAGCTT	1 cut(s)	3060
HpaII	CCGG	4 cut(s)	40, 216, 2009, 2754
Hpy166II	GTNNAC	6 cut(s)	169, 427, 1715, 2213, 2283, 3048
Hpy8I	GTNNAC	6 cut(s)	169, 427, 1715, 2213, 2283, 3048
HpyCH4IV	ACGT	2 cut(s)	246, 2779
HpyCH4V	TGCA	9 cut(s)	329, 775, 1741, 1793, 1880, 2087, 2186, 2489, 2981
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 36, 91, 141, 1753, 1768, 2603
HpyF3I	CTNAG	7 cut(s)	386, 431, 1666, 1728, 1758, 2277, 2472
HpySE526I	ACGT	2 cut(s)	246, 2779
Hsp92I	GRCGYC	3 cut(s)	12, 698, 2457
HspAI	GCGC	7 cut(s)	85, 142, 739, 760, 919, 2326, 2431
KflI	GGGWCCC	1 cut(s)	612
Ksp22I	TGATCA	2 cut(s)	2683, 2857
LguI	GCTCTTC	1 cut(s)	1212
Lsp1109I	GCAGC	7 cut(s)	759, 1753, 1756, 1804, 1826, 1864, 2134
LweI	GCATC	7 cut(s)	316, 544, 2074, 2116, 2702, 2808, 2976
MabI	ACCWGGT	1 cut(s)	1828
MaeI	CTAG	7 cut(s)	486, 495, 504, 621, 1835, 1920, 2990
MaeII	ACGT	2 cut(s)	246, 2779
MaeIII	GTNAC	8 cut(s)	119, 125, 1148, 1689, 1731, 2102, 2620, 2896
MbiI	CCGCTC	2 cut(s)	1222, 1348
MflI	RGATCY	4 cut(s)	818, 2863, 3004, 3031
MhlI	GDGCHC	2 cut(s)	323, 2656
MlsI	TGGCCA	2 cut(s)	5, 1605
MluNI	TGGCCA	2 cut(s)	5, 1605
MlyI	GAGTC	8 cut(s)	14, 341, 366, 857, 1531, 1649, 1739, 2567
MmeI	TCCRAC	4 cut(s)	75, 1849, 1993, 2689
Mox20I	TGGCCA	2 cut(s)	5, 1605
MroXI	GAANNNNTTC	4 cut(s)	1590, 1927, 2391, 2664
MscI	TGGCCA	2 cut(s)	5, 1605
MseI	TTAA	8 cut(s)	201, 2232, 2261, 2417, 2445, 2501, 2928, 3000
MslI	CAYNNNNRTG	1 cut(s)	1701
Msp20I	TGGCCA	2 cut(s)	5, 1605
MspA1I	CMGCKG	3 cut(s)	317, 453, 1817
MspCI	CTTAAG	1 cut(s)	2444
MspI	CCGG	4 cut(s)	40, 216, 2009, 2754
MspR9I	CCNGG	9 cut(s)	17, 41, 354, 1484, 1509, 1607, 1830, 2009, 2754
Mva1269I	GAATGC	3 cut(s)	1590, 1929, 2983
MvaI	CCWGG	6 cut(s)	17, 354, 1484, 1509, 1607, 1830
MvnI	CGCG	4 cut(s)	144, 762, 921, 2409
MwoI	GCNNNNNNNGC	7 cut(s)	11, 36, 91, 141, 1753, 1768, 2603
NciI	CCSGG	3 cut(s)	41, 2009, 2754
NdeI	CATATG	1 cut(s)	2397
NheI	GCTAGC	1 cut(s)	2989
NlaIV	GGNNCC	6 cut(s)	351, 613, 614, 1310, 1936, 3033
NmeAIII	GCCGAG	1 cut(s)	1337
NmuCI	GTSAC	6 cut(s)	119, 125, 1148, 1689, 1731, 2102
NruI	TCGCGA	1 cut(s)	2409
NspI	RCATGY	1 cut(s)	2548
NspV	TTCGAA	1 cut(s)	857
PagI	TCATGA	4 cut(s)	874, 1408, 2068, 2308
PciSI	GCTCTTC	1 cut(s)	1212
PcsI	WCGNNNNNNNCGW	3 cut(s)	63, 66, 174
PctI	GAATGC	3 cut(s)	1590, 1929, 2983
PdmI	GAANNNNTTC	4 cut(s)	1590, 1927, 2391, 2664
PfeI	GAWTC	6 cut(s)	212, 382, 500, 1101, 2387, 2401
PflFI	GACNNNGTC	2 cut(s)	173, 1274
PfoI	TCCNGGA	2 cut(s)	352, 1507
PleI	GAGTC	8 cut(s)	14, 340, 365, 856, 1530, 1648, 1738, 2566
PpsI	GAGTC	8 cut(s)	14, 340, 365, 856, 1530, 1648, 1738, 2566
PpuMI	RGGWCCY	2 cut(s)	612, 1787
PshAI	GACNNNNGTC	1 cut(s)	164
Psp5II	RGGWCCY	2 cut(s)	612, 1787
Psp6I	CCWGG	6 cut(s)	15, 352, 1482, 1507, 1605, 1828
PspGI	CCWGG	6 cut(s)	15, 352, 1482, 1507, 1605, 1828
PspN4I	GGNNCC	6 cut(s)	351, 613, 614, 1310, 1936, 3033
PspPI	GGNCC	5 cut(s)	42, 612, 1309, 1787, 2801
PspPPI	RGGWCCY	2 cut(s)	612, 1787
PstI	CTGCAG	1 cut(s)	1795
PstNI	CAGNNNCTG	4 cut(s)	335, 1817, 1820, 2866
PsuI	RGATCY	4 cut(s)	818, 2863, 3004, 3031
PsyI	GACNNNGTC	2 cut(s)	173, 1274
PvuII	CAGCTG	1 cut(s)	1817
RruI	TCGCGA	1 cut(s)	2409
RsaI	GTAC	6 cut(s)	1518, 1957, 2019, 2046, 2096, 2723
RsaNI	GTAC	6 cut(s)	1517, 1956, 2018, 2045, 2095, 2722
RseI	CAYNNNNRTG	1 cut(s)	1701
SalI	GTCGAC	1 cut(s)	167
SapI	GCTCTTC	1 cut(s)	1212
SaqAI	TTAA	8 cut(s)	201, 2232, 2261, 2417, 2445, 2501, 2928, 3000
Sau96I	GGNCC	5 cut(s)	42, 612, 1309, 1787, 2801
SchI	GAGTC	8 cut(s)	14, 341, 366, 857, 1531, 1649, 1739, 2567
ScrFI	CCNGG	9 cut(s)	17, 41, 354, 1484, 1509, 1607, 1830, 2009, 2754
SduI	GDGCHC	2 cut(s)	323, 2656
SexAI	ACCWGGT	1 cut(s)	1828
SfaNI	GCATC	7 cut(s)	316, 544, 2074, 2116, 2702, 2808, 2976
SfcI	CTRYAG	3 cut(s)	1791, 2098, 2880
SfuI	TTCGAA	1 cut(s)	857
SgrDI	CGTCGACG	1 cut(s)	167
SinI	GGWCC	2 cut(s)	612, 1787
SmiMI	CAYNNNNRTG	1 cut(s)	1701
SmlI	CTYRAG	2 cut(s)	516, 2444
SmoI	CTYRAG	2 cut(s)	516, 2444
SspI	AATATT	2 cut(s)	997, 2437
SspMI	CTAG	7 cut(s)	486, 495, 504, 621, 1835, 1920, 2990
StyD4I	CCNGG	9 cut(s)	15, 39, 352, 1482, 1507, 1605, 1828, 2007, 2752
StyI	CCWWGG	1 cut(s)	732
TaiI	ACGT	2 cut(s)	249, 2782
TaqII	GACCGA	1 cut(s)	1350
TauI	GCSGC	6 cut(s)	111, 196, 924, 1225, 1351, 2643
TfiI	GAWTC	6 cut(s)	212, 382, 500, 1101, 2387, 2401
Tru1I	TTAA	8 cut(s)	201, 2232, 2261, 2417, 2445, 2501, 2928, 3000
Tru9I	TTAA	8 cut(s)	201, 2232, 2261, 2417, 2445, 2501, 2928, 3000
TscAI	CASTG	8 cut(s)	439, 541, 964, 2149, 2336, 2496, 2697, 3088
TseFI	GTSAC	6 cut(s)	119, 125, 1148, 1689, 1731, 2102
TseI	GCWGC	7 cut(s)	772, 1741, 1744, 1814, 1817, 1877, 2147
Tsp45I	GTSAC	6 cut(s)	119, 125, 1148, 1689, 1731, 2102
TspGWI	ACGGA	4 cut(s)	1090, 1132, 2171, 2257
TspRI	CASTG	8 cut(s)	439, 541, 964, 2149, 2336, 2496, 2697, 3088
Tth111I	GACNNNGTC	2 cut(s)	173, 1274
Vha464I	CTTAAG	1 cut(s)	2444
VpaK11BI	GGWCC	2 cut(s)	612, 1787
XagI	CCTNNNNNAGG	1 cut(s)	621
XapI	RAATTY	1 cut(s)	261
XbaI	TCTAGA	3 cut(s)	620, 1834, 1919
XceI	RCATGY	1 cut(s)	2548
XcmI	CCANNNNNNNNNTGG	2 cut(s)	565, 2697
XmiI	GTMKAC	3 cut(s)	168, 426, 1714
XmnI	GAANNNNTTC	4 cut(s)	1590, 1927, 2391, 2664
XspI	CTAG	7 cut(s)	486, 495, 504, 621, 1835, 1920, 2990

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.