Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0002761

Physical Location & Seq

Genomic Coordinates Forward (+)

56600226 .. 56604595

Gene Structure 4370 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG343600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2691 bp

ATGGATAAGAGCTCAAAGACCTTGGGCAAAGAACTTCGTAGTGATGATGATCCCAGGAGTCCTATTGGGGGTAAGTCTCATAGTGAGGCCAGCTTGCCTCAAAATTCTAGTGCCGAGCCTCGCGAAGAATCAGTTTCCAGAGTTGACCTTGAGGATCATGCCAATGGGAATTTAGAGAAGAGGCGGCACCTGGAATCTGGGTCCCCTTCTAAAGGAGGTGGTCATCGAAAGAAATACTATAGTGAAAATGTGGATGATGATAGAAGCAAATTAGCTAATAAAGAAAAGTCACCCTATAGAAGTAGTGGTGACAGGTATGGTGAAGTGTTGCGTGGCAGGAGCAGATCAGGGTCACATGATCATGTGAGAGGGAGATCCCGTTCCCGTAGTATAGTTGAAGAGGAGGCACCATCTAGAAGAAGATCTCATTCTCGCAGTATGTTAGAAGAGGAAGCTCTTTCTAAAAGGAGACGTTATCATGATCGAGAAATCTCAGTATATGCCGAGAAAAGCAAGGCTGCACACAACTCTGATGATGAAGGTATGGTGAGGGATGATGAAAGGGAACACAGTATTAGTTATAGCAGATACTCTGGATTAGATCGCAGTCGAGAGAGAGAGAGGAGTAGGGAGAGGGAGGTGGACAGGGTTTGGAGAAGGGAGAAAGAACTAGAGAGGAACAGGGGCAGGGATCGGAGAAGGGAGAAAGAAAGAGAAAGGAGTAGTGACAGGGATTTGTTTAGGGACAGGAAAAGGGGAATTGGACGTGGTGATAGCACTGAAAGGGTGGTTGATACGGAAAGTAGAAGGGAAGAGCGACATAGAAGCAGGGACAGAGAGAACAGGGACAGGACAAGGGAGGATGATGTTGATAGGAGCAGGGGCAGGGGCAAGCCTGCTGACAGAGAGAGAGATAGAGATATGGAGAGGGATCGGGATAGGGATAGGGATAGGGACAGAGTAACAGACCGGAAATGGGAGAGGCGGGATGATAGATATAGGGACAAGGGTCGAGATATGGAGAGGGAGAGAAATGAAACTGAAAGTGGATATGGAACTCGAGACAAGCATAATCATTCTGGTCAATCAAGGTATGAAGAAAAAGAATATAACCAGGATGGTTCAACAAAATCTGATCAAGCGGAAGTTCAGCTAGAAAGAGATGAAGATGAACAAGGAGATGATGAAGAGATGGACAGTTTGCAAGTTGCTGATCAGGAAGAGGAAGATCTTAACAGAATTAAGGAGGAAAGTAGGAGGAGAAAGCAAGCAATCTTGGAAAAATATAAAAGTCAGCAGTCACAGTCCGAGCAAAAGACCGACGTACAAATTGAGTCACAGTTACAGCAACCCACTCAATTAGAGGGTCAAAAAGATCATCTGGATCAATCAACAGGGGTTGCCAAATCCAGAGCAGAAGTTGATGGTGCTAGGAGTTCTGGAGGAGTATATATGGCTGAAGCATTTTCTACTACAGCTCGTCAGAATGGTGCCCCAGGGCTTGGAGAGGGTACTCCAAAGAGTGAAAGCTCTGGTGGCTCAGAACCCAAAAAAGAAAGAGCTGATGGTATTTTATGCGATGATATCTTTGGTGAGACCCCAACTGGAGTTCGAAAATTGGACAAAGGAGATGCTGTACGAATTGAAAGGAGTGGTCTCCGTGACAACTGGGATGATGCAGAAGGGTACTACAGCTACCGGTTTGGGGAGTTACTTGATGGTCGATATGAGATTACCGCTGCTCATGGAAAAGGCGTGTTTTCAACTGTTGTTCGTGCAAAGAACCTTAAGGTTGGTAATGGTGAACCAGAAGAAGTGGCAATTAAGATTATTCGTAGCAATGATACTATGTACAAGGCTGGTATGACTGAGTTGGCCATATTGAAGAAATTAGTAGGTCAAGATCCAGACAATAAGCGCTATTGTGTTCGTTTTCTATCAAGTTTCAAGTATCGAAATCATCTTTGTTTAGTTTTTGAATCTCTGCATATGAATCTTCGTGAGCTTTTAAAGAAGTTTGGACGCAATATTGGTCTGAATCTAACTGCGGTGAGAGTATATGCTAAGCAACTCTTGATTGCATTGAAGCATCTCAAAAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAACATGCTGGTAAATGAAGCAAAAAACGTTCTGAAGCTTTGTGATTTTGGTAACGCCATGTTTGCTGGCAAGAATGAAGTTACACCATACCTTGTGAGCCGATTTTATCGGGCCCCTGAAATAATTCTTGGCTTGCCTTATGATCATCCACTGGATATCTGGTCTGTTGGTTGCTGTTTGTTCGAACTTTATACTGGAAAAGTTCTTTTTCCTGGTGCTACGAACAATGATATGCTACGTCTTCACATGGAATTGAAAGGCCCTTTCCCTAAGAAGATGCTTCGGAAGGGAGCATTTACTTATCAAAATTTCGATCAGGATCTGAACTTCCATGCCACAGAAGATGATCCTGTTACAAAAAAGGTTATTAAACGCGTGATTCTCAACATAAAACCAAAAGATATCGGATCAATGATTGCAGGTTCTTCTGGCGAGGATCCAGATCCCAAGATATTAGCTGATTTTAAAGATCTTTTAGATAAAATGTTTGTGCTGGATCCAGACAAGAGGTTGACAGTATCACAAGGTTTGAATCATCCATTCATCACTGGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016310 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase TBPIP

Protein Analysis

896

Amino Acids

103.31

Weight (kDa)

8.52

Isoelectric Point (pI)

52.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	577 - 893	3.7e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	582 - 792	3.8e-19	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13350 AT1G13350 AT1G13350 AT3G25840 AT3G25840 AT3G53640
fragaria_vesca	FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640
malus_domestica	MD13G1043800.v1.1 MD16G1044600.v1.1
prunus_persica	Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1
pyrus_communis	pycom16g03900
rosa_chinensis	RchiOBHm_Chr4g0435481
rosa_laevigata	RLG00000006589
rosa_multiflora	Rmu_sc0001940.1_g000027
rosa_roxburghii	Rroxscaffold_5G00376710
rosa_rugosa	Rorug04G0285400 Rorug04G0285500
rosa_samantha	Rh4AG341100 Rh4BG349300 Rh4CG364000 Rh4DG343600
rosa_wichuraiana	Rw4G029760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2543
AccB1I	GGYRCC	3 cut(s)	186, 406, 1490
AccB7I	CCANNNNNTGG	1 cut(s)	1502
AccII	CGCG	2 cut(s)	123, 2508
AciI	CCGC	5 cut(s)	184, 985, 1142, 1737, 2048
AclI	AACGTT	1 cut(s)	2160
AcoI	YGGCCR	1 cut(s)	1875
AcsI	RAATTY	3 cut(s)	103, 169, 2440
AcuI	CTGAAG	2 cut(s)	1479, 2186
AfaI	GTAC	5 cut(s)	1326, 1513, 1638, 1688, 1853
AfeI	AGCGCT	1 cut(s)	1919
AfiI	CCNNNNNNNGG	5 cut(s)	68, 212, 976, 1502, 1705
AflII	CTTAAG	1 cut(s)	1787
AflIII	ACRYGT	1 cut(s)	2506
AgeI	ACCGGT	1 cut(s)	1698
AjiI	CACGTC	1 cut(s)	767
AjnI	CCWGG	5 cut(s)	53, 189, 1113, 1495, 2344
AjuI	GAANNNNNNNTTGG	2 cut(s)	2244, 2276
AloI	GAACNNNNNNTCC	2 cut(s)	364, 396
Alw21I	GWGCWC	1 cut(s)	14
Alw26I	GTCTC	5 cut(s)	81, 463, 1056, 1589, 1661
AlwNI	CAGNNNCTG	1 cut(s)	2455
Ama87I	CYCGRG	1 cut(s)	1059
Aor51HI	AGCGCT	1 cut(s)	1919
AoxI	GGCC	4 cut(s)	87, 1875, 2244, 2392
ApaI	GGGCCC	1 cut(s)	2248
ApeKI	GCWGC	2 cut(s)	518, 1739
ApoI	RAATTY	3 cut(s)	103, 169, 2440
AsiGI	ACCGGT	1 cut(s)	1698
Asp700I	GAANNNNTTC	1 cut(s)	2256
AspLEI	GCGC	1 cut(s)	1920
AspS9I	GGNCC	4 cut(s)	201, 2244, 2245, 2393
AsuHPI	GGTGA	8 cut(s)	282, 320, 332, 559, 782, 1604, 1814, 2062
AsuII	TTCGAA	2 cut(s)	1612, 2316
AvaI	CYCGRG	1 cut(s)	1059
AvaII	GGWCC	1 cut(s)	201
BaeGI	GKGCMC	2 cut(s)	1495, 2248
BalI	TGGCCA	1 cut(s)	1877
BamHI	GGATCC	2 cut(s)	2569, 2629
BanI	GGYRCC	3 cut(s)	186, 406, 1490
BanII	GRGCYC	2 cut(s)	14, 2248
BbsI	GAAGAC	1 cut(s)	2366
Bbv12I	GWGCWC	1 cut(s)	14
BbvI	GCAGC	2 cut(s)	505, 1726
BccI	CCATC	6 cut(s)	418, 1112, 1186, 1418, 1559, 1712
BciT130I	CCWGG	5 cut(s)	55, 191, 1115, 1497, 2346
BclI	TGATCA	4 cut(s)	358, 1135, 1213, 2275
BcoDI	GTCTC	5 cut(s)	81, 463, 1056, 1589, 1661
BfaI	CTAG	5 cut(s)	108, 414, 671, 1154, 1431
BfmI	CTRYAG	4 cut(s)	238, 295, 1473, 1690
BfoI	RGCGCY	1 cut(s)	1921
BfrI	CTTAAG	1 cut(s)	1787
BfuAI	ACCTGC	1 cut(s)	2543
BglII	AGATCT	3 cut(s)	422, 1228, 2602
BisI	GCNGC	3 cut(s)	185, 519, 1740
BlpI	GCTNAGC	1 cut(s)	2064
BlsI	GCNGC	3 cut(s)	186, 520, 1741
Bme1390I	CCNGG	5 cut(s)	55, 191, 1115, 1497, 2346
Bme18I	GGWCC	1 cut(s)	201
BmeT110I	CYCGRG	1 cut(s)	1059
BmgBI	CACGTC	1 cut(s)	767
BmgT120I	GGNCC	4 cut(s)	201, 2244, 2245, 2393
BmiI	GGNNCC	9 cut(s)	188, 202, 203, 408, 1492, 2246, 2247, 2571, 2631
BmrFI	CCNGG	5 cut(s)	55, 191, 1115, 1497, 2346
BmrI	ACTGGG	1 cut(s)	1678
BmsI	GCATC	4 cut(s)	1621, 1666, 2098, 2400
BmuI	ACTGGG	1 cut(s)	1678
BoxI	GACNNNNGTC	1 cut(s)	1008
BpiI	GAAGAC	1 cut(s)	2366
BpmI	CTGGAG	2 cut(s)	1461, 1626
Bpu1102I	GCTNAGC	1 cut(s)	2064
Bpu14I	TTCGAA	2 cut(s)	1612, 2316
BpuEI	CTTGAG	1 cut(s)	170
BsaBI	GATNNNNATC	3 cut(s)	48, 2451, 2574
BsaI	GGTCTC	2 cut(s)	1589, 1661
BsaJI	CCNNGG	4 cut(s)	21, 53, 1495, 1496
BsaWI	WCCGGW	2 cut(s)	969, 1698
BsaXI	ACNNNNNCTCC	4 cut(s)	364, 394, 1620, 1650
Bsc4I	CCNNNNNNNGG	5 cut(s)	68, 212, 976, 1502, 1705
Bse118I	RCCGGY	1 cut(s)	1698
Bse1I	ACTGG	5 cut(s)	1609, 1673, 2289, 2332, 2686
Bse3DI	GCAATG	1 cut(s)	1846
Bse8I	GATNNNNATC	3 cut(s)	48, 2451, 2574
BseBI	CCWGG	5 cut(s)	55, 191, 1115, 1497, 2346
BseDI	CCNNGG	4 cut(s)	21, 53, 1495, 1496
BseGI	GGATG	8 cut(s)	259, 559, 868, 994, 1123, 1678, 2278, 2668
BseJI	GATNNNNATC	3 cut(s)	48, 2451, 2574
BseLI	CCNNNNNNNGG	5 cut(s)	68, 212, 976, 1502, 1705
BseMI	GCAATG	1 cut(s)	1846
BseMII	CTCAG	3 cut(s)	507, 1554, 1860
BseNI	ACTGG	5 cut(s)	1609, 1673, 2289, 2332, 2686
BseRI	GAGGAG	4 cut(s)	416, 637, 1273, 1458
BseSI	GKGCMC	2 cut(s)	1495, 2248
BseXI	GCAGC	2 cut(s)	505, 1726
BsgI	GTGCAG	1 cut(s)	504
Bsh1236I	CGCG	2 cut(s)	123, 2508
BshFI	GGCC	4 cut(s)	89, 1877, 2246, 2394
BshNI	GGYRCC	3 cut(s)	186, 406, 1490
BshTI	ACCGGT	1 cut(s)	1698
BsiHKAI	GWGCWC	1 cut(s)	14
BsiHKCI	CYCGRG	1 cut(s)	1059
BsiSI	CCGG	2 cut(s)	970, 1699
BslFI	GGGAC	6 cut(s)	187, 758, 845, 860, 968, 1016
BslI	CCNNNNNNNGG	5 cut(s)	68, 212, 976, 1502, 1705
BsmAI	GTCTC	5 cut(s)	81, 463, 1056, 1589, 1661
BsmBI	CGTCTC	1 cut(s)	463
BsmFI	GGGAC	6 cut(s)	187, 758, 845, 860, 968, 1016
BsnI	GGCC	4 cut(s)	89, 1877, 2246, 2394
Bso31I	GGTCTC	2 cut(s)	1589, 1661
BsoBI	CYCGRG	1 cut(s)	1059
Bsp119I	TTCGAA	2 cut(s)	1612, 2316
Bsp120I	GGGCCC	1 cut(s)	2244
Bsp1286I	GDGCHC	3 cut(s)	14, 1495, 2248
Bsp1407I	TGTACA	1 cut(s)	1851
Bsp1720I	GCTNAGC	1 cut(s)	2064
Bsp68I	TCGCGA	1 cut(s)	123
BspACI	CCGC	5 cut(s)	184, 985, 1142, 1737, 2048
BspANI	GGCC	4 cut(s)	89, 1877, 2246, 2394
BspCNI	CTCAG	3 cut(s)	506, 1553, 1861
BspFNI	CGCG	2 cut(s)	123, 2508
BspHI	TCATGA	1 cut(s)	478
BspLI	GGNNCC	9 cut(s)	188, 202, 203, 408, 1492, 2246, 2247, 2571, 2631
BspMI	ACCTGC	1 cut(s)	2543
BspQI	GCTCTTC	1 cut(s)	807
BspT104I	TTCGAA	2 cut(s)	1612, 2316
BspT107I	GGYRCC	3 cut(s)	186, 406, 1490
BspTI	CTTAAG	1 cut(s)	1787
BspTNI	GGTCTC	2 cut(s)	1589, 1661
BsrDI	GCAATG	1 cut(s)	1846
BsrFI	RCCGGY	1 cut(s)	1698
BsrGI	TGTACA	1 cut(s)	1851
BsrI	ACTGG	5 cut(s)	1609, 1673, 2289, 2332, 2686
BssAI	RCCGGY	1 cut(s)	1698
BssECI	CCNNGG	4 cut(s)	21, 53, 1495, 1496
BssT1I	CCWWGG	1 cut(s)	21
Bst2UI	CCWGG	5 cut(s)	55, 191, 1115, 1497, 2346
Bst4CI	ACNGT	7 cut(s)	572, 1199, 1305, 1341, 1768, 2102, 2650
Bst6I	CTCTTC	6 cut(s)	173, 393, 441, 807, 1182, 1215
BstAFI	CTTAAG	1 cut(s)	1787
BstAUI	TGTACA	1 cut(s)	1851
BstBI	TTCGAA	2 cut(s)	1612, 2316
BstC8I	GCNNGC	7 cut(s)	91, 95, 893, 897, 1269, 2200, 2267
BstDEI	CTNAG	5 cut(s)	493, 1540, 1869, 2064, 2403
BstENI	CCTNNNNNAGG	1 cut(s)	210
BstF5I	GGATG	8 cut(s)	259, 559, 868, 994, 1123, 1678, 2278, 2668
BstFNI	CGCG	2 cut(s)	123, 2508
BstH2I	RGCGCY	1 cut(s)	1921
BstHHI	GCGC	1 cut(s)	1920
BstMAI	GTCTC	5 cut(s)	81, 463, 1056, 1589, 1661
BstMWI	GCNNNNNNNGC	2 cut(s)	1536, 2195
BstNI	CCWGG	5 cut(s)	55, 191, 1115, 1497, 2346
BstNSI	RCATGY	1 cut(s)	2140
BstPAI	GACNNNNGTC	1 cut(s)	1008
BstSCI	CCNGG	5 cut(s)	53, 189, 1113, 1495, 2344
BstSFI	CTRYAG	4 cut(s)	238, 295, 1473, 1690
BstSLI	GKGCMC	2 cut(s)	1495, 2248
BstUI	CGCG	2 cut(s)	123, 2508
BstV1I	GCAGC	2 cut(s)	505, 1726
BstV2I	GAAGAC	1 cut(s)	2366
BstX2I	RGATCY	9 cut(s)	374, 422, 1228, 1903, 2452, 2569, 2575, 2602, 2629
BstYI	RGATCY	9 cut(s)	374, 422, 1228, 1903, 2452, 2569, 2575, 2602, 2629
BsuRI	GGCC	4 cut(s)	89, 1877, 2246, 2394
BtgZI	GCGATG	1 cut(s)	1593
BtrI	CACGTC	1 cut(s)	767
BtsCI	GGATG	8 cut(s)	259, 559, 868, 994, 1123, 1678, 2278, 2668
BtsIMutI	CAGTG	3 cut(s)	777, 2282, 2679
BtuMI	TCGCGA	1 cut(s)	123
BveI	ACCTGC	1 cut(s)	2543
Cac8I	GCNNGC	7 cut(s)	91, 95, 893, 897, 1269, 2200, 2267
CaiI	CAGNNNCTG	1 cut(s)	2455
CciI	TCATGA	1 cut(s)	478
CfoI	GCGC	1 cut(s)	1920
Cfr10I	RCCGGY	1 cut(s)	1698
Cfr13I	GGNCC	4 cut(s)	201, 2244, 2245, 2393
CseI	GACGC	1 cut(s)	2031
Csp6I	GTAC	5 cut(s)	1325, 1512, 1637, 1687, 1852
CspAI	ACCGGT	1 cut(s)	1698
CspCI	CAANNNNNGTGG	2 cut(s)	2083, 2118
CviAII	CATG	9 cut(s)	158, 356, 362, 479, 1745, 2137, 2191, 2380, 2465
CviQI	GTAC	5 cut(s)	1325, 1512, 1637, 1687, 1852
DdeI	CTNAG	5 cut(s)	493, 1540, 1869, 2064, 2403
DraI	TTTAAA	2 cut(s)	2010, 2599
EaeI	YGGCCR	1 cut(s)	1875
Eam1104I	CTCTTC	6 cut(s)	173, 393, 441, 807, 1182, 1215
EarI	CTCTTC	6 cut(s)	173, 393, 441, 807, 1182, 1215
Ecl136II	GAGCTC	1 cut(s)	12
Eco130I	CCWWGG	1 cut(s)	21
Eco24I	GRGCYC	2 cut(s)	14, 2248
Eco31I	GGTCTC	2 cut(s)	1589, 1661
Eco32I	GATATC	3 cut(s)	1585, 2290, 2536
Eco47I	GGWCC	1 cut(s)	201
Eco47III	AGCGCT	1 cut(s)	1919
Eco53kI	GAGCTC	1 cut(s)	12
Eco57I	CTGAAG	2 cut(s)	1479, 2186
Eco88I	CYCGRG	1 cut(s)	1059
EcoICRI	GAGCTC	1 cut(s)	12
EcoNI	CCTNNNNNAGG	1 cut(s)	210
EcoO109I	RGGNCCY	3 cut(s)	201, 2245, 2393
EcoRII	CCWGG	5 cut(s)	53, 189, 1113, 1495, 2344
EcoRV	GATATC	3 cut(s)	1585, 2290, 2536
EcoT14I	CCWWGG	1 cut(s)	21
EcoT38I	GRGCYC	2 cut(s)	14, 2248
ErhI	CCWWGG	1 cut(s)	21
Esp3I	CGTCTC	1 cut(s)	463
FaeI	CATG	9 cut(s)	161, 359, 365, 482, 1748, 2140, 2194, 2383, 2468
FalI	AAGNNNNNCTT	2 cut(s)	2057, 2089
FaqI	GGGAC	6 cut(s)	187, 758, 845, 860, 968, 1016
FatI	CATG	9 cut(s)	157, 355, 361, 478, 1744, 2136, 2190, 2379, 2464
FauI	CCCGC	1 cut(s)	978
FauNDI	CATATG	1 cut(s)	1989
FbaI	TGATCA	4 cut(s)	358, 1135, 1213, 2275
Fnu4HI	GCNGC	3 cut(s)	185, 519, 1740
FokI	GGATG	8 cut(s)	266, 566, 875, 1001, 1130, 1685, 2265, 2655
FriOI	GRGCYC	2 cut(s)	14, 2248
Fsp4HI	GCNGC	3 cut(s)	185, 519, 1740
FspBI	CTAG	5 cut(s)	108, 414, 671, 1154, 1431
GlaI	GCGC	1 cut(s)	1919
GluI	GCNGC	3 cut(s)	185, 519, 1740
GsuI	CTGGAG	2 cut(s)	1461, 1626
HaeII	RGCGCY	1 cut(s)	1921
HaeIII	GGCC	4 cut(s)	89, 1877, 2246, 2394
HapII	CCGG	2 cut(s)	970, 1699
HgaI	GACGC	1 cut(s)	2031
HhaI	GCGC	1 cut(s)	1920
Hin1II	CATG	9 cut(s)	161, 359, 365, 482, 1748, 2140, 2194, 2383, 2468
Hin6I	GCGC	1 cut(s)	1918
HinP1I	GCGC	1 cut(s)	1918
HincII	GTYRAC	2 cut(s)	145, 2646
HindII	GTYRAC	2 cut(s)	145, 2646
HindIII	AAGCTT	1 cut(s)	2168
HinfI	GANTC	9 cut(s)	58, 128, 194, 1334, 1979, 1993, 2038, 2512, 2665
HpaII	CCGG	2 cut(s)	970, 1699
HphI	GGTGA	8 cut(s)	282, 320, 332, 559, 782, 1604, 1814, 2062
Hpy166II	GTNNAC	4 cut(s)	145, 643, 1805, 2646
Hpy8I	GTNNAC	4 cut(s)	145, 643, 1805, 2646
Hpy99I	CGWCG	1 cut(s)	1325
HpyAV	CCTTC	7 cut(s)	216, 533, 651, 693, 801, 1676, 2413
HpyCH4III	ACNGT	7 cut(s)	572, 1199, 1305, 1341, 1768, 2102, 2650
HpyCH4IV	ACGT	5 cut(s)	472, 766, 1323, 2160, 2371
HpyCH4V	TGCA	7 cut(s)	521, 1204, 1679, 1778, 1987, 2081, 2552
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1536, 2195
HpyF3I	CTNAG	5 cut(s)	493, 1540, 1869, 2064, 2403
HpySE526I	ACGT	5 cut(s)	472, 766, 1323, 2160, 2371
Hsp92II	CATG	9 cut(s)	161, 359, 365, 482, 1748, 2140, 2194, 2383, 2468
HspAI	GCGC	1 cut(s)	1918
KflI	GGGWCCC	1 cut(s)	201
Ksp22I	TGATCA	4 cut(s)	358, 1135, 1213, 2275
LguI	GCTCTTC	1 cut(s)	807
LmnI	GCTCC	3 cut(s)	339, 876, 2423
Lsp1109I	GCAGC	2 cut(s)	505, 1726
LweI	GCATC	4 cut(s)	1621, 1666, 2098, 2400
MaeI	CTAG	5 cut(s)	108, 414, 671, 1154, 1431
MaeII	ACGT	5 cut(s)	472, 766, 1323, 2160, 2371
MflI	RGATCY	9 cut(s)	374, 422, 1228, 1903, 2452, 2569, 2575, 2602, 2629
MhlI	GDGCHC	3 cut(s)	14, 1495, 2248
MlsI	TGGCCA	1 cut(s)	1877
MluI	ACGCGT	1 cut(s)	2506
MluNI	TGGCCA	1 cut(s)	1877
MlyI	GAGTC	2 cut(s)	67, 1343
Mox20I	TGGCCA	1 cut(s)	1877
MroXI	GAANNNNTTC	1 cut(s)	2256
MscI	TGGCCA	1 cut(s)	1877
MseI	TTAA	7 cut(s)	1233, 1242, 1788, 1824, 2009, 2502, 2598
MslI	CAYNNNNRTG	2 cut(s)	162, 360
Msp20I	TGGCCA	1 cut(s)	1877
MspA1I	CMGCKG	1 cut(s)	1739
MspCI	CTTAAG	1 cut(s)	1787
MspI	CCGG	2 cut(s)	970, 1699
MspR9I	CCNGG	5 cut(s)	55, 191, 1115, 1497, 2346
MvaI	CCWGG	5 cut(s)	55, 191, 1115, 1497, 2346
MvnI	CGCG	2 cut(s)	123, 2508
MwoI	GCNNNNNNNGC	2 cut(s)	1536, 2195
NdeI	CATATG	1 cut(s)	1989
NlaIII	CATG	9 cut(s)	161, 359, 365, 482, 1748, 2140, 2194, 2383, 2468
NlaIV	GGNNCC	9 cut(s)	188, 202, 203, 408, 1492, 2246, 2247, 2571, 2631
NmeAIII	GCCGAG	2 cut(s)	139, 529
NmuCI	GTSAC	7 cut(s)	288, 308, 351, 725, 1299, 1335, 1661
NruI	TCGCGA	1 cut(s)	123
NspI	RCATGY	1 cut(s)	2140
NspV	TTCGAA	2 cut(s)	1612, 2316
PaeR7I	CTCGAG	1 cut(s)	1059
PagI	TCATGA	1 cut(s)	478
PasI	CCCWGGG	1 cut(s)	1496
PciSI	GCTCTTC	1 cut(s)	807
PdmI	GAANNNNTTC	1 cut(s)	2256
PfeI	GAWTC	7 cut(s)	128, 194, 1979, 1993, 2038, 2512, 2665
PflMI	CCANNNNNTGG	1 cut(s)	1502
PinAI	ACCGGT	1 cut(s)	1698
PkrI	GCNGC	3 cut(s)	186, 520, 1741
PleI	GAGTC	2 cut(s)	66, 1342
PpsI	GAGTC	2 cut(s)	66, 1342
PpuMI	RGGWCCY	1 cut(s)	201
PshAI	GACNNNNGTC	1 cut(s)	1008
Psp124BI	GAGCTC	1 cut(s)	14
Psp1406I	AACGTT	1 cut(s)	2160
Psp5II	RGGWCCY	1 cut(s)	201
Psp6I	CCWGG	5 cut(s)	53, 189, 1113, 1495, 2344
PspGI	CCWGG	5 cut(s)	53, 189, 1113, 1495, 2344
PspN4I	GGNNCC	9 cut(s)	188, 202, 203, 408, 1492, 2246, 2247, 2571, 2631
PspOMI	GGGCCC	1 cut(s)	2244
PspPI	GGNCC	4 cut(s)	201, 2244, 2245, 2393
PspPPI	RGGWCCY	1 cut(s)	201
PstNI	CAGNNNCTG	1 cut(s)	2455
PsuI	RGATCY	9 cut(s)	374, 422, 1228, 1903, 2452, 2569, 2575, 2602, 2629
RruI	TCGCGA	1 cut(s)	123
RsaI	GTAC	5 cut(s)	1326, 1513, 1638, 1688, 1853
RsaNI	GTAC	5 cut(s)	1325, 1512, 1637, 1687, 1852
RseI	CAYNNNNRTG	2 cut(s)	162, 360
SacI	GAGCTC	1 cut(s)	14
SapI	GCTCTTC	1 cut(s)	807
SaqAI	TTAA	7 cut(s)	1233, 1242, 1788, 1824, 2009, 2502, 2598
SatI	GCNGC	3 cut(s)	185, 519, 1740
Sau96I	GGNCC	4 cut(s)	201, 2244, 2245, 2393
SchI	GAGTC	2 cut(s)	67, 1343
ScrFI	CCNGG	5 cut(s)	55, 191, 1115, 1497, 2346
SduI	GDGCHC	3 cut(s)	14, 1495, 2248
SfaNI	GCATC	4 cut(s)	1621, 1666, 2098, 2400
SfcI	CTRYAG	4 cut(s)	238, 295, 1473, 1690
Sfr274I	CTCGAG	1 cut(s)	1059
SfuI	TTCGAA	2 cut(s)	1612, 2316
SinI	GGWCC	1 cut(s)	201
SlaI	CTCGAG	1 cut(s)	1059
SmiMI	CAYNNNNRTG	2 cut(s)	162, 360
SmlI	CTYRAG	3 cut(s)	149, 1059, 1787
SmoI	CTYRAG	3 cut(s)	149, 1059, 1787
SsiI	CCGC	5 cut(s)	184, 985, 1142, 1737, 2048
SspI	AATATT	1 cut(s)	2029
SspMI	CTAG	5 cut(s)	108, 414, 671, 1154, 1431
SstI	GAGCTC	1 cut(s)	14
StyD4I	CCNGG	5 cut(s)	53, 189, 1113, 1495, 2344
StyI	CCWWGG	1 cut(s)	21
TaaI	ACNGT	7 cut(s)	572, 1199, 1305, 1341, 1768, 2102, 2650
TaiI	ACGT	5 cut(s)	475, 769, 1326, 2163, 2374
TaqII	GACCGA	1 cut(s)	1334
TatI	WGTACW	1 cut(s)	1851
TauI	GCSGC	1 cut(s)	187
TfiI	GAWTC	7 cut(s)	128, 194, 1979, 1993, 2038, 2512, 2665
Tru1I	TTAA	7 cut(s)	1233, 1242, 1788, 1824, 2009, 2502, 2598
Tru9I	TTAA	7 cut(s)	1233, 1242, 1788, 1824, 2009, 2502, 2598
TscAI	CASTG	3 cut(s)	784, 2289, 2686
TseFI	GTSAC	7 cut(s)	288, 308, 351, 725, 1299, 1335, 1661
TseI	GCWGC	2 cut(s)	518, 1739
Tsp45I	GTSAC	7 cut(s)	288, 308, 351, 725, 1299, 1335, 1661
TspGWI	ACGGA	2 cut(s)	812, 1649
TspRI	CASTG	3 cut(s)	784, 2289, 2686
Van91I	CCANNNNNTGG	1 cut(s)	1502
Vha464I	CTTAAG	1 cut(s)	1787
VpaK11BI	GGWCC	1 cut(s)	201
XagI	CCTNNNNNAGG	1 cut(s)	210
XapI	RAATTY	3 cut(s)	103, 169, 2440
XbaI	TCTAGA	1 cut(s)	413
XceI	RCATGY	1 cut(s)	2140
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2289
XhoI	CTCGAG	1 cut(s)	1059
XmnI	GAANNNNTTC	1 cut(s)	2256
XspI	CTAG	5 cut(s)	108, 414, 671, 1154, 1431

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.