Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0002761

Physical Location & Seq

Genomic Coordinates Forward (+)

56462579 .. 56470498

Gene Structure 7920 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G029760.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2676 bp

ATGGATAAGAGCTCAAAGACCTTGGGCAAAGAACTTCGTAGTGATGATGATCGCAGGAGTCCTATTGGGGGTAAGTCTCATAGTGAGGCTGGCTTGCCTCAAAATTCTAGTGCCGAGTCTCGCGAAGAATCAGTTTCCAGAGTTGACCTTGAGGATCATGCCAATGGGAATTTAGAGAAGAGGCGGCACCTGGAATCTGGGTCCCCTTCTAAAGGAGGTGGTCATCGAAAGAAATACTATAGTGAAAATGTGGATGATGATAGAAGCAAATTAGCTAATAAAGAAAAGTCACCCTATAGAAGTAGTGGTGACAGGTATGGTGAAGTGTTGCGTGGCAGGAGCAGATCAGGGTCACATGATCATGTGAGAGGGAGATCCCGTTCTTGTAGTATAGTTGAAGAGGAGGCACCATCTAGAAGAAGATGTCATTCTCGCGGTATGTTAGAAGAGGAAGCTCTTTCGAAAAGGAGACGTTATCATGATCGAGAAATCTCAGTATATGCCGGGAAAAGCAAGGCCGCACACAACTCTGATGATGAAGGTATGGTGAGGGATGATGATAGGGAACACAGTATTAGTTATAGCAGATACTCTGGATTAGATCGCAGTCGAGAGAGAGAGAGGAGTAGGGAGAGGGAGGTGGACAGGGTTCGGAGAAGGGAGAAAGAACTAGAGAGGAACAGGGGCAGGGATCGGAGAAGGGAGAAAGAAAGAGAAAGGAGTAGTGACAGGGATTTGTTTAGGGACAGGAAAAGGGGAATTGGACGTGGTGATAGCACTGAAAGGGTGGTTGATACGGAAAGTAGAAGGGAAGAGCGACATAGAAGCAGGGACAGGACAAGGGAGGATGATGTTGATAGGAGCAGGGCCAGGGGCAAGCCTGCTGACAGAGAGAGAGATAGAGATATGGAGAGGGATCGGGATAGGGATAGGGATAGGGACAGAGTAACAGACCGGAAATGGGAGAGGCGGGATGATAGATATAGGGACAAGGGTCGAGATATGGAGAGGGAGAGAAATGAAACTGAAAGTGGATATGGAAATCGAGACAAGCATAATCATTCTGGTCAATCAAGGTATGAAGAAAAAGAATATAACCAGGATGGTTCAACAAAATCTGATCAAGCAGAAGTTCAGCTAGAAAGAGATGAAGATGAACAAGGAGATGATGAAGAGATGGTCAGTTTGCAAGTTGCTGATCAGGAAGAGGAAGATCTTAACAGAATTAAGGAGGAAAGTAGGAGGAGAAAGCAAGCAATCTTGGAAAAATATAAAAGTCAGCAGTCACAGTCCCAGCAAAAGACCGACGTACAAATTGAGTCACAGTTACAGCAACCCACTCAATTAGAAGGTCAAAAAGATCATCTGGATCAATCAACAGGGGTTGCCAAATCCAGAGCAGAAGTTGATGGTTCTAGGAGTTCTGGAGGAGTATATATGGCTGAAGCATTTTCTACTACAGCTCGTCAGAATGGTGCCCCAGGGCTTGGAGAGGGTACTCCAAAGAGTGAAAGCTCTGGTGGCTCAGAACCCAAAAAAGAAAAAGCTGATGGTATTTTATGCGATGATATCTTTGGTGAGACCCCAACTGGAGTTCGAAAATTGGACAAAGGAGATGCTGTACGAATTGAAAGGAGTGGTCTCCGTGACAACTGGGATGATGCAGAAGGGTACTACAGCTACCGGTTTGGGGAGTTACTTGATGGTCGATATGAGATTACCGCTGCTCATGGAAAAGGCGTGTTTTCAACTGTTGTTCGTGCAAAGAACCTTAAGGTTGGTAATGGTGAACCAGAAGAAGTGGCAATTAAGATTATTCGTAGCAATGATACTATGTACAAGGCTGGTATGACTGAGTTGGCCATATTGAAGAAATTAGTAGGTCAAGATCCAGACAATAAGCGCTATTGTGTTCGTTTTCTATCAAGTTTCAAGTATCGAAATCATCTTTGTTTAGTTTTTGAATCTCTGCATATGAATCTTCGTGAGCTTTTAAAGAAGTTTGGACGCAATATTGGTCTGAATCTAACTGCGGTGAGAGTATATGCTAAGCAACTCTTGATTGCATTGAAGCATCTCAAAAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAACATGCTGGTAAATGAAGCAAAAAACGTTCTGAAGCTTTGTGATTTTGGTAACGCCATGTTTGCTGGCAAGAATGAAGTTACACCATACCTTGTGAGCCGATTTTATCGGGCCCCTGAAATAATTCTTGGCTTGCCTTATGATCATCCACTGGATATCTGGTCTGTTGGTTGCTGTTTGTTCGAACTTTATACTGGAAAAGTTCTTTTTCCTGGTGCTACGAACAATGATATGCTACGTCTTCACATGGAATTGAAAGGCCCTTTCCCTAAGAAGATGCTTCGGAAGGGAGCATTTACTTATCAAAATTTCGATCAGGATCTGAACTTCCATGCCACAGAAGATGATCCTGTTACAAAAAAGGTTATTAAACGCGTGATTCTCAACATAAAGCCAAAAGATATCGGATCAATGATCGCAGGTTCTTCTGGCGAGGATCCAGATCCCAAGATATTAGCTGATTTTAAAGATCTTTTAGATAAAATGTTTGTGCTGGATCCTGACAAGAGGTTGACAGTATCACAAGGTTTGAATCATCCATTCATCACTGGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016310 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase TBPIP

Protein Analysis

891

Amino Acids

102.47

Weight (kDa)

8.77

Isoelectric Point (pI)

53.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	572 - 888	3.7e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	577 - 787	3.7e-19	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13350 AT1G13350 AT1G13350 AT3G25840 AT3G25840 AT3G53640
fragaria_vesca	FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640
malus_domestica	MD13G1043800.v1.1 MD16G1044600.v1.1
prunus_persica	Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1
pyrus_communis	pycom16g03900
rosa_chinensis	RchiOBHm_Chr4g0435481
rosa_laevigata	RLG00000006589
rosa_multiflora	Rmu_sc0001940.1_g000027
rosa_roxburghii	Rroxscaffold_5G00376710
rosa_rugosa	Rorug04G0285400 Rorug04G0285500
rosa_samantha	Rh4AG341100 Rh4BG349300 Rh4CG364000 Rh4DG343600
rosa_wichuraiana	Rw4G029760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2528
AccB1I	GGYRCC	3 cut(s)	186, 406, 1475
AccB7I	CCANNNNNTGG	1 cut(s)	1487
AccII	CGCG	3 cut(s)	123, 435, 2493
AciI	CCGC	6 cut(s)	184, 435, 519, 970, 1722, 2033
AclI	AACGTT	1 cut(s)	2145
AcoI	YGGCCR	1 cut(s)	1860
AcsI	RAATTY	3 cut(s)	103, 169, 2425
AcuI	CTGAAG	2 cut(s)	1464, 2171
AfaI	GTAC	5 cut(s)	1311, 1498, 1623, 1673, 1838
AfeI	AGCGCT	1 cut(s)	1904
AfiI	CCNNNNNNNGG	5 cut(s)	68, 212, 961, 1487, 1690
AflII	CTTAAG	1 cut(s)	1772
AflIII	ACRYGT	1 cut(s)	2491
AgeI	ACCGGT	1 cut(s)	1683
AjiI	CACGTC	1 cut(s)	767
AjnI	CCWGG	5 cut(s)	189, 869, 1098, 1480, 2329
AjuI	GAANNNNNNNTTGG	2 cut(s)	2229, 2261
AloI	GAACNNNNNNTCC	2 cut(s)	364, 396
Alw21I	GWGCWC	1 cut(s)	14
Alw26I	GTCTC	6 cut(s)	81, 123, 463, 1041, 1574, 1646
AlwNI	CAGNNNCTG	1 cut(s)	2440
Aor51HI	AGCGCT	1 cut(s)	1904
AoxI	GGCC	5 cut(s)	516, 867, 1860, 2229, 2377
ApaI	GGGCCC	1 cut(s)	2233
ApeKI	GCWGC	1 cut(s)	1724
ApoI	RAATTY	3 cut(s)	103, 169, 2425
AsiGI	ACCGGT	1 cut(s)	1683
Asp700I	GAANNNNTTC	1 cut(s)	2241
AspLEI	GCGC	1 cut(s)	1905
AspS9I	GGNCC	5 cut(s)	201, 867, 2229, 2230, 2378
AsuC2I	CCSGG	1 cut(s)	505
AsuHPI	GGTGA	8 cut(s)	282, 320, 332, 559, 782, 1589, 1799, 2047
AsuII	TTCGAA	3 cut(s)	461, 1597, 2301
AvaII	GGWCC	1 cut(s)	201
BaeGI	GKGCMC	2 cut(s)	1480, 2233
BalI	TGGCCA	1 cut(s)	1862
BamHI	GGATCC	2 cut(s)	2554, 2614
BanI	GGYRCC	3 cut(s)	186, 406, 1475
BanII	GRGCYC	2 cut(s)	14, 2233
BbsI	GAAGAC	1 cut(s)	2351
Bbv12I	GWGCWC	1 cut(s)	14
BbvI	GCAGC	1 cut(s)	1711
BccI	CCATC	6 cut(s)	418, 1097, 1171, 1403, 1544, 1697
BciT130I	CCWGG	5 cut(s)	191, 871, 1100, 1482, 2331
BclI	TGATCA	4 cut(s)	358, 1120, 1198, 2260
BcnI	CCSGG	1 cut(s)	505
BcoDI	GTCTC	6 cut(s)	81, 123, 463, 1041, 1574, 1646
BfaI	CTAG	5 cut(s)	108, 414, 671, 1139, 1416
BfmI	CTRYAG	4 cut(s)	238, 295, 1458, 1675
BfoI	RGCGCY	1 cut(s)	1906
BfrI	CTTAAG	1 cut(s)	1772
BfuAI	ACCTGC	1 cut(s)	2528
BglII	AGATCT	2 cut(s)	1213, 2587
BisI	GCNGC	3 cut(s)	185, 519, 1725
BlpI	GCTNAGC	1 cut(s)	2049
BlsI	GCNGC	3 cut(s)	186, 520, 1726
Bme1390I	CCNGG	6 cut(s)	191, 505, 871, 1100, 1482, 2331
Bme18I	GGWCC	1 cut(s)	201
BmgBI	CACGTC	1 cut(s)	767
BmgT120I	GGNCC	5 cut(s)	201, 867, 2229, 2230, 2378
BmiI	GGNNCC	9 cut(s)	188, 202, 203, 408, 1477, 2231, 2232, 2556, 2616
BmrFI	CCNGG	6 cut(s)	191, 505, 871, 1100, 1482, 2331
BmrI	ACTGGG	1 cut(s)	1663
BmsI	GCATC	4 cut(s)	1606, 1651, 2083, 2385
BmuI	ACTGGG	1 cut(s)	1663
BoxI	GACNNNNGTC	1 cut(s)	993
BpiI	GAAGAC	1 cut(s)	2351
BpmI	CTGGAG	2 cut(s)	1446, 1611
Bpu1102I	GCTNAGC	1 cut(s)	2049
Bpu14I	TTCGAA	3 cut(s)	461, 1597, 2301
BpuEI	CTTGAG	1 cut(s)	170
BpuMI	CCSGG	1 cut(s)	505
BsaBI	GATNNNNATC	3 cut(s)	48, 2436, 2559
BsaI	GGTCTC	2 cut(s)	1574, 1646
BsaJI	CCNNGG	4 cut(s)	21, 870, 1480, 1481
BsaWI	WCCGGW	2 cut(s)	954, 1683
BsaXI	ACNNNNNCTCC	4 cut(s)	364, 394, 1605, 1635
Bsc4I	CCNNNNNNNGG	5 cut(s)	68, 212, 961, 1487, 1690
Bse118I	RCCGGY	1 cut(s)	1683
Bse1I	ACTGG	5 cut(s)	1594, 1658, 2274, 2317, 2671
Bse3DI	GCAATG	1 cut(s)	1831
Bse8I	GATNNNNATC	3 cut(s)	48, 2436, 2559
BseBI	CCWGG	5 cut(s)	191, 871, 1100, 1482, 2331
BseDI	CCNNGG	4 cut(s)	21, 870, 1480, 1481
BseGI	GGATG	8 cut(s)	259, 559, 853, 979, 1108, 1663, 2263, 2653
BseJI	GATNNNNATC	3 cut(s)	48, 2436, 2559
BseLI	CCNNNNNNNGG	5 cut(s)	68, 212, 961, 1487, 1690
BseMI	GCAATG	1 cut(s)	1831
BseMII	CTCAG	3 cut(s)	507, 1539, 1845
BseNI	ACTGG	5 cut(s)	1594, 1658, 2274, 2317, 2671
BseRI	GAGGAG	4 cut(s)	416, 637, 1258, 1443
BseSI	GKGCMC	2 cut(s)	1480, 2233
BseXI	GCAGC	1 cut(s)	1711
BseYI	CCCAGC	1 cut(s)	1293
Bsh1236I	CGCG	3 cut(s)	123, 435, 2493
BshFI	GGCC	5 cut(s)	518, 869, 1862, 2231, 2379
BshNI	GGYRCC	3 cut(s)	186, 406, 1475
BshTI	ACCGGT	1 cut(s)	1683
BsiHKAI	GWGCWC	1 cut(s)	14
BsiSI	CCGG	3 cut(s)	504, 955, 1684
BslFI	GGGAC	6 cut(s)	187, 758, 845, 953, 1001, 1276
BslI	CCNNNNNNNGG	5 cut(s)	68, 212, 961, 1487, 1690
BsmAI	GTCTC	6 cut(s)	81, 123, 463, 1041, 1574, 1646
BsmBI	CGTCTC	1 cut(s)	463
BsmFI	GGGAC	6 cut(s)	187, 758, 845, 953, 1001, 1276
BsnI	GGCC	5 cut(s)	518, 869, 1862, 2231, 2379
Bso31I	GGTCTC	2 cut(s)	1574, 1646
Bsp119I	TTCGAA	3 cut(s)	461, 1597, 2301
Bsp120I	GGGCCC	1 cut(s)	2229
Bsp1286I	GDGCHC	3 cut(s)	14, 1480, 2233
Bsp1407I	TGTACA	1 cut(s)	1836
Bsp1720I	GCTNAGC	1 cut(s)	2049
Bsp68I	TCGCGA	1 cut(s)	123
BspACI	CCGC	6 cut(s)	184, 435, 519, 970, 1722, 2033
BspANI	GGCC	5 cut(s)	518, 869, 1862, 2231, 2379
BspCNI	CTCAG	3 cut(s)	506, 1538, 1846
BspFNI	CGCG	3 cut(s)	123, 435, 2493
BspHI	TCATGA	1 cut(s)	478
BspLI	GGNNCC	9 cut(s)	188, 202, 203, 408, 1477, 2231, 2232, 2556, 2616
BspMI	ACCTGC	1 cut(s)	2528
BspQI	GCTCTTC	1 cut(s)	807
BspT104I	TTCGAA	3 cut(s)	461, 1597, 2301
BspT107I	GGYRCC	3 cut(s)	186, 406, 1475
BspTI	CTTAAG	1 cut(s)	1772
BspTNI	GGTCTC	2 cut(s)	1574, 1646
BsrDI	GCAATG	1 cut(s)	1831
BsrFI	RCCGGY	1 cut(s)	1683
BsrGI	TGTACA	1 cut(s)	1836
BsrI	ACTGG	5 cut(s)	1594, 1658, 2274, 2317, 2671
BssAI	RCCGGY	1 cut(s)	1683
BssECI	CCNNGG	4 cut(s)	21, 870, 1480, 1481
BssT1I	CCWWGG	1 cut(s)	21
Bst2UI	CCWGG	5 cut(s)	191, 871, 1100, 1482, 2331
Bst4CI	ACNGT	6 cut(s)	572, 1290, 1326, 1753, 2087, 2635
Bst6I	CTCTTC	6 cut(s)	173, 393, 441, 807, 1167, 1200
BstAFI	CTTAAG	1 cut(s)	1772
BstAUI	TGTACA	1 cut(s)	1836
BstBI	TTCGAA	3 cut(s)	461, 1597, 2301
BstC8I	GCNNGC	7 cut(s)	91, 95, 878, 882, 1254, 2185, 2252
BstDEI	CTNAG	5 cut(s)	493, 1525, 1854, 2049, 2388
BstENI	CCTNNNNNAGG	1 cut(s)	210
BstF5I	GGATG	8 cut(s)	259, 559, 853, 979, 1108, 1663, 2263, 2653
BstFNI	CGCG	3 cut(s)	123, 435, 2493
BstH2I	RGCGCY	1 cut(s)	1906
BstHHI	GCGC	1 cut(s)	1905
BstMAI	GTCTC	6 cut(s)	81, 123, 463, 1041, 1574, 1646
BstMWI	GCNNNNNNNGC	2 cut(s)	1521, 2180
BstNI	CCWGG	5 cut(s)	191, 871, 1100, 1482, 2331
BstNSI	RCATGY	1 cut(s)	2125
BstPAI	GACNNNNGTC	1 cut(s)	993
BstSCI	CCNGG	6 cut(s)	189, 503, 869, 1098, 1480, 2329
BstSFI	CTRYAG	4 cut(s)	238, 295, 1458, 1675
BstSLI	GKGCMC	2 cut(s)	1480, 2233
BstUI	CGCG	3 cut(s)	123, 435, 2493
BstV1I	GCAGC	1 cut(s)	1711
BstV2I	GAAGAC	1 cut(s)	2351
BstX2I	RGATCY	8 cut(s)	374, 1213, 1888, 2437, 2554, 2560, 2587, 2614
BstYI	RGATCY	8 cut(s)	374, 1213, 1888, 2437, 2554, 2560, 2587, 2614
BsuRI	GGCC	5 cut(s)	518, 869, 1862, 2231, 2379
BtgZI	GCGATG	1 cut(s)	1578
BtrI	CACGTC	1 cut(s)	767
BtsCI	GGATG	8 cut(s)	259, 559, 853, 979, 1108, 1663, 2263, 2653
BtsIMutI	CAGTG	3 cut(s)	777, 2267, 2664
BtuMI	TCGCGA	1 cut(s)	123
BveI	ACCTGC	1 cut(s)	2528
Cac8I	GCNNGC	7 cut(s)	91, 95, 878, 882, 1254, 2185, 2252
CaiI	CAGNNNCTG	1 cut(s)	2440
CciI	TCATGA	1 cut(s)	478
CfoI	GCGC	1 cut(s)	1905
Cfr10I	RCCGGY	1 cut(s)	1683
Cfr13I	GGNCC	5 cut(s)	201, 867, 2229, 2230, 2378
CseI	GACGC	1 cut(s)	2016
Csp6I	GTAC	5 cut(s)	1310, 1497, 1622, 1672, 1837
CspAI	ACCGGT	1 cut(s)	1683
CspCI	CAANNNNNGTGG	2 cut(s)	2068, 2103
CviAII	CATG	9 cut(s)	158, 356, 362, 479, 1730, 2122, 2176, 2365, 2450
CviQI	GTAC	5 cut(s)	1310, 1497, 1622, 1672, 1837
DdeI	CTNAG	5 cut(s)	493, 1525, 1854, 2049, 2388
DraI	TTTAAA	2 cut(s)	1995, 2584
EaeI	YGGCCR	1 cut(s)	1860
Eam1104I	CTCTTC	6 cut(s)	173, 393, 441, 807, 1167, 1200
EarI	CTCTTC	6 cut(s)	173, 393, 441, 807, 1167, 1200
Ecl136II	GAGCTC	1 cut(s)	12
Eco130I	CCWWGG	1 cut(s)	21
Eco24I	GRGCYC	2 cut(s)	14, 2233
Eco31I	GGTCTC	2 cut(s)	1574, 1646
Eco32I	GATATC	3 cut(s)	1570, 2275, 2521
Eco47I	GGWCC	1 cut(s)	201
Eco47III	AGCGCT	1 cut(s)	1904
Eco53kI	GAGCTC	1 cut(s)	12
Eco57I	CTGAAG	2 cut(s)	1464, 2171
EcoICRI	GAGCTC	1 cut(s)	12
EcoNI	CCTNNNNNAGG	1 cut(s)	210
EcoO109I	RGGNCCY	3 cut(s)	201, 2230, 2378
EcoRII	CCWGG	5 cut(s)	189, 869, 1098, 1480, 2329
EcoRV	GATATC	3 cut(s)	1570, 2275, 2521
EcoT14I	CCWWGG	1 cut(s)	21
EcoT38I	GRGCYC	2 cut(s)	14, 2233
ErhI	CCWWGG	1 cut(s)	21
Esp3I	CGTCTC	1 cut(s)	463
FaeI	CATG	9 cut(s)	161, 359, 365, 482, 1733, 2125, 2179, 2368, 2453
FalI	AAGNNNNNCTT	2 cut(s)	2042, 2074
FaqI	GGGAC	6 cut(s)	187, 758, 845, 953, 1001, 1276
FatI	CATG	9 cut(s)	157, 355, 361, 478, 1729, 2121, 2175, 2364, 2449
FauI	CCCGC	1 cut(s)	963
FauNDI	CATATG	1 cut(s)	1974
FbaI	TGATCA	4 cut(s)	358, 1120, 1198, 2260
Fnu4HI	GCNGC	3 cut(s)	185, 519, 1725
FokI	GGATG	8 cut(s)	266, 566, 860, 986, 1115, 1670, 2250, 2640
FriOI	GRGCYC	2 cut(s)	14, 2233
Fsp4HI	GCNGC	3 cut(s)	185, 519, 1725
FspBI	CTAG	5 cut(s)	108, 414, 671, 1139, 1416
GlaI	GCGC	1 cut(s)	1904
GluI	GCNGC	3 cut(s)	185, 519, 1725
GsaI	CCCAGC	1 cut(s)	1297
GsuI	CTGGAG	2 cut(s)	1446, 1611
HaeII	RGCGCY	1 cut(s)	1906
HaeIII	GGCC	5 cut(s)	518, 869, 1862, 2231, 2379
HapII	CCGG	3 cut(s)	504, 955, 1684
HgaI	GACGC	1 cut(s)	2016
HhaI	GCGC	1 cut(s)	1905
Hin1II	CATG	9 cut(s)	161, 359, 365, 482, 1733, 2125, 2179, 2368, 2453
Hin6I	GCGC	1 cut(s)	1903
HinP1I	GCGC	1 cut(s)	1903
HincII	GTYRAC	2 cut(s)	145, 2631
HindII	GTYRAC	2 cut(s)	145, 2631
HindIII	AAGCTT	1 cut(s)	2153
HpaII	CCGG	3 cut(s)	504, 955, 1684
HphI	GGTGA	8 cut(s)	282, 320, 332, 559, 782, 1589, 1799, 2047
Hpy166II	GTNNAC	4 cut(s)	145, 643, 1790, 2631
Hpy8I	GTNNAC	4 cut(s)	145, 643, 1790, 2631
Hpy99I	CGWCG	1 cut(s)	1310
HpyAV	CCTTC	8 cut(s)	216, 533, 651, 693, 801, 1343, 1661, 2398
HpyCH4III	ACNGT	6 cut(s)	572, 1290, 1326, 1753, 2087, 2635
HpyCH4IV	ACGT	5 cut(s)	472, 766, 1308, 2145, 2356
HpyCH4V	TGCA	5 cut(s)	1189, 1664, 1763, 1972, 2066
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1521, 2180
HpyF3I	CTNAG	5 cut(s)	493, 1525, 1854, 2049, 2388
HpySE526I	ACGT	5 cut(s)	472, 766, 1308, 2145, 2356
Hsp92II	CATG	9 cut(s)	161, 359, 365, 482, 1733, 2125, 2179, 2368, 2453
HspAI	GCGC	1 cut(s)	1903
KflI	GGGWCCC	1 cut(s)	201
Ksp22I	TGATCA	4 cut(s)	358, 1120, 1198, 2260
LguI	GCTCTTC	1 cut(s)	807
LmnI	GCTCC	3 cut(s)	339, 861, 2408
Lsp1109I	GCAGC	1 cut(s)	1711
LweI	GCATC	4 cut(s)	1606, 1651, 2083, 2385
MaeI	CTAG	5 cut(s)	108, 414, 671, 1139, 1416
MaeII	ACGT	5 cut(s)	472, 766, 1308, 2145, 2356
MflI	RGATCY	8 cut(s)	374, 1213, 1888, 2437, 2554, 2560, 2587, 2614
MhlI	GDGCHC	3 cut(s)	14, 1480, 2233
MlsI	TGGCCA	1 cut(s)	1862
MluI	ACGCGT	1 cut(s)	2491
MluNI	TGGCCA	1 cut(s)	1862
MlyI	GAGTC	3 cut(s)	67, 125, 1328
Mox20I	TGGCCA	1 cut(s)	1862
MroXI	GAANNNNTTC	1 cut(s)	2241
MscI	TGGCCA	1 cut(s)	1862
MseI	TTAA	7 cut(s)	1218, 1227, 1773, 1809, 1994, 2487, 2583
MslI	CAYNNNNRTG	2 cut(s)	162, 360
Msp20I	TGGCCA	1 cut(s)	1862
MspA1I	CMGCKG	1 cut(s)	1724
MspCI	CTTAAG	1 cut(s)	1772
MspI	CCGG	3 cut(s)	504, 955, 1684
MspR9I	CCNGG	6 cut(s)	191, 505, 871, 1100, 1482, 2331
MvaI	CCWGG	5 cut(s)	191, 871, 1100, 1482, 2331
MvnI	CGCG	3 cut(s)	123, 435, 2493
MwoI	GCNNNNNNNGC	2 cut(s)	1521, 2180
NciI	CCSGG	1 cut(s)	505
NdeI	CATATG	1 cut(s)	1974
NlaIII	CATG	9 cut(s)	161, 359, 365, 482, 1733, 2125, 2179, 2368, 2453
NlaIV	GGNNCC	9 cut(s)	188, 202, 203, 408, 1477, 2231, 2232, 2556, 2616
NmeAIII	GCCGAG	1 cut(s)	139
NmuCI	GTSAC	7 cut(s)	288, 308, 351, 725, 1284, 1320, 1646
NruI	TCGCGA	1 cut(s)	123
NspI	RCATGY	1 cut(s)	2125
NspV	TTCGAA	3 cut(s)	461, 1597, 2301
PagI	TCATGA	1 cut(s)	478
PasI	CCCWGGG	1 cut(s)	1481
PciSI	GCTCTTC	1 cut(s)	807
PdmI	GAANNNNTTC	1 cut(s)	2241
PfeI	GAWTC	7 cut(s)	128, 194, 1964, 1978, 2023, 2497, 2650
PflMI	CCANNNNNTGG	1 cut(s)	1487
PinAI	ACCGGT	1 cut(s)	1683
PkrI	GCNGC	3 cut(s)	186, 520, 1726
PleI	GAGTC	3 cut(s)	66, 124, 1327
PpsI	GAGTC	3 cut(s)	66, 124, 1327
PpuMI	RGGWCCY	1 cut(s)	201
PshAI	GACNNNNGTC	1 cut(s)	993
Psp124BI	GAGCTC	1 cut(s)	14
Psp1406I	AACGTT	1 cut(s)	2145
Psp5II	RGGWCCY	1 cut(s)	201
Psp6I	CCWGG	5 cut(s)	189, 869, 1098, 1480, 2329
PspFI	CCCAGC	1 cut(s)	1293
PspGI	CCWGG	5 cut(s)	189, 869, 1098, 1480, 2329
PspN4I	GGNNCC	9 cut(s)	188, 202, 203, 408, 1477, 2231, 2232, 2556, 2616
PspOMI	GGGCCC	1 cut(s)	2229
PspPI	GGNCC	5 cut(s)	201, 867, 2229, 2230, 2378
PspPPI	RGGWCCY	1 cut(s)	201
PstNI	CAGNNNCTG	1 cut(s)	2440
PsuI	RGATCY	8 cut(s)	374, 1213, 1888, 2437, 2554, 2560, 2587, 2614
RruI	TCGCGA	1 cut(s)	123
RsaI	GTAC	5 cut(s)	1311, 1498, 1623, 1673, 1838
RsaNI	GTAC	5 cut(s)	1310, 1497, 1622, 1672, 1837
RseI	CAYNNNNRTG	2 cut(s)	162, 360
SacI	GAGCTC	1 cut(s)	14
SapI	GCTCTTC	1 cut(s)	807
SaqAI	TTAA	7 cut(s)	1218, 1227, 1773, 1809, 1994, 2487, 2583
SatI	GCNGC	3 cut(s)	185, 519, 1725
Sau96I	GGNCC	5 cut(s)	201, 867, 2229, 2230, 2378
SchI	GAGTC	3 cut(s)	67, 125, 1328
ScrFI	CCNGG	6 cut(s)	191, 505, 871, 1100, 1482, 2331
SduI	GDGCHC	3 cut(s)	14, 1480, 2233
SfaNI	GCATC	4 cut(s)	1606, 1651, 2083, 2385
SfcI	CTRYAG	4 cut(s)	238, 295, 1458, 1675
SfuI	TTCGAA	3 cut(s)	461, 1597, 2301
SinI	GGWCC	1 cut(s)	201
SmiMI	CAYNNNNRTG	2 cut(s)	162, 360
SmlI	CTYRAG	2 cut(s)	149, 1772
SmoI	CTYRAG	2 cut(s)	149, 1772
SsiI	CCGC	6 cut(s)	184, 435, 519, 970, 1722, 2033
SspI	AATATT	1 cut(s)	2014
SspMI	CTAG	5 cut(s)	108, 414, 671, 1139, 1416
SstI	GAGCTC	1 cut(s)	14
StyD4I	CCNGG	6 cut(s)	189, 503, 869, 1098, 1480, 2329
StyI	CCWWGG	1 cut(s)	21
TaaI	ACNGT	6 cut(s)	572, 1290, 1326, 1753, 2087, 2635
TaiI	ACGT	5 cut(s)	475, 769, 1311, 2148, 2359
TaqII	GACCGA	1 cut(s)	1319
TatI	WGTACW	1 cut(s)	1836
TauI	GCSGC	2 cut(s)	187, 521
TfiI	GAWTC	7 cut(s)	128, 194, 1964, 1978, 2023, 2497, 2650
Tru1I	TTAA	7 cut(s)	1218, 1227, 1773, 1809, 1994, 2487, 2583
Tru9I	TTAA	7 cut(s)	1218, 1227, 1773, 1809, 1994, 2487, 2583
TscAI	CASTG	3 cut(s)	784, 2274, 2671
TseFI	GTSAC	7 cut(s)	288, 308, 351, 725, 1284, 1320, 1646
TseI	GCWGC	1 cut(s)	1724
Tsp45I	GTSAC	7 cut(s)	288, 308, 351, 725, 1284, 1320, 1646
TspGWI	ACGGA	2 cut(s)	812, 1634
TspRI	CASTG	3 cut(s)	784, 2274, 2671
Van91I	CCANNNNNTGG	1 cut(s)	1487
Vha464I	CTTAAG	1 cut(s)	1772
VpaK11BI	GGWCC	1 cut(s)	201
XagI	CCTNNNNNAGG	1 cut(s)	210
XapI	RAATTY	3 cut(s)	103, 169, 2425
XbaI	TCTAGA	1 cut(s)	413
XceI	RCATGY	1 cut(s)	2125
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2274
XmnI	GAANNNNTTC	1 cut(s)	2241
XspI	CTAG	5 cut(s)	108, 414, 671, 1139, 1416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.