Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002761

Physical Location & Seq

Genomic Coordinates Reverse (-)

30046460 .. 30055445

Gene Structure 8986 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G308700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3225 bp

ATGGCCAGCGAAGCCCAAGACTCGCATCGCAAGCACCGCCGGGCCTCTTCCTCCGATGACGAGGCCGAGAAGTCGTCGAAGCGCCACAAGCACCGTCACCACCATCGCCACCACCGTCACCGTCATGGCAGCAAAAAGCGCGAAGGCGATATCAAGCCGGCCGTTGACGATATTGAAGCTCCTCTGGCGGCTGTTCTGTTATCTTCTTCAGGTGCCAATAGTTCTAGGCCAGATGAAGACGTGGAGGAAGGCGAAATTCTTGAGGAGGAGGGTGTCGGTAGTCACGACGACGGCGTCTTGAAGACGACAGCCGGCTCTGATGCCGAGTCTGGTGAAATTGAGGCTCTTGGAGTTCGCGATCAGTCTGATAATCGAAATCTGGGAATTTTTGTCGATAACATTGATAATAATTCAAAAACCATGAGAGAGCACTGTAGTGACGATGATACTCGAATTCATGTTGGTGGTAAGTCTCGGGATGAGACTGGGTTGCCTAGACATTCCAGTATTGAGCCTCAAGATGATTTAGCTTCCAGATTAGGCATAGAGGATCATGCCAATGGCAATTCCCACCGGTTTCACAAAGAGGAGAAGAGGCGGCACAGGGAATCTGGGTTGCCTTCTAAAGAAAGTGATAAGCGAAAGCATTACTATGATGATGAAAAAGTGGATGATGATAGAAGCAAAGTAGCTAATCGAAAAAAGCCATCCTCTGGAAGTAGTGGAGACAAGCACAAGACCTTGGTACGTTCACCATCTCGTGATAGGTGCGGGGATGATTTATATGGTAGGAGCAGATCGAGGTCATATGATCATGTGAGGGAGAGATCATGCTCCCGCAGTAGAGTAGAAGAGGAGGCCCTTTCTAAAAGGAGACGTTATCATGAACGAGACACTGCAGTATCTGTAGAGAAAAGTAAGGCTACGTTTGACTCTGGTGATGAAGGAATGGTTCGGAGGCATGATAGTGACGATTTGGCTAGGGATGATGAACGAGAACAGAGTATTAGTTATAGCAGATACTCTGTATCCGATCGTAGCAGAGAGAGAGAGAGGAGTAGGGAGAGGGAGGTAGATAGGATTCAGAGAAGGGAGAAAGAACAAGAAAGGAGCAGAAATAGGGATCGGAGAAGGGATGGAGAAAGAGAAAGGAGTAGTGACAGGGATTTGGTTAGGGACAGGAAAAGGGGAATTGGACGAGACGATAGCAGGGAAAGGAGAAGAGAAGAGCGACATAGGAGCAGAGACACGGAGAACAGGGACAGAAAAACGGAGGAAGAAAACGATAGGAGCAGGGACCGGATCAAGGCTGATAGGGACAGAGATATGGAGAGGGATCGAGATAGGGACAGAGTTACAGACCGGAAATGGGAGAGGCGAGATGATAGAGACAGGGATAAGGGTCGAGATATGGAGAGGGAGAAATATGAAAATCTTGAAGACAGCTATGGAAATCGAGATAGGAATAAACATTCTGGTCGATCAAGACATGATGAAAAAGAATACAACCAGGACAGAACAAGAAAAACTGATCCAGCAAAGGTTCAGAGTTCAAACAGTTATGCTGCAGAAGGGATTGAAGACAGACCAAAAAGAGGTGAAGATGAACAAGAAGACAATGAAGAGAGGGCCACTTTTCAATTTGCTGAGCAGGAAGAGGAAGATCTGAACAGGATCAAGGAGGAGAGTCGAAGAAGAAGGCAAGCAATCTTAGAAAAATACAGAAATCAGCAGTCACAGCAAACAAATGAGTTACAAAAAACTGAGTCACAGTTACAACAACGAATTGAGCCTCAGCCTCTTTTGGAGGGTGTGGAGAAAGACAAAGATCCTCAAGATCATGCGACCGAATCAGCTGGTGTTGCCAAATCTGGTGCAGAAACTGATGATGGCAGGAGTGATGAAGATGTGTCTCTTGCTGTATTTTCAATTTCACCTCAGCAGAATGGTGATGTTGCTTCTAGGATGACGTCTGGTGCCACTGGGCTTGGAGAGGGTACTCCAAAGAGTGAAAGATCTGATGTCATTTTCTGTGATGATATCTTTGGTGAGACCCCAGTTGGAGTTAGAAAATTGGGCAAAGGAGATGGTGTTCGAATTGAAAGGAGTGGTCTTCATGACAACTGGGATGATGCAGAAGGGTACTACAGCTACCGGTTTGGGGAACTACTTGATGCCCGATATGAAATTACTGCTGCTCACGGAAAGGGTGTCTTTTCAACCGTAGTTCGTGCAAAGAACCTTAAAGTTGGTAACGGTGAACCCGATGAAGTGGCAATTAAGATTATACGTAGCAATGACACTATGTACAAGGCTGGTATGACGGAGTTGGCCATATTGAAGAAATTAGTAGGTCAAGATCCAGAAAATAAGCGCCACTGTGTTCGTTTTCTATCAAATTTCAAGTATCGAAATCATCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTCCGTGAGGTCTTAAAGAAGTTTGGGCGCAATATTGGTCTTAAGCTAACTGCTGTGAGAGCATATGCCAAGCAACTTTTTATTGCACTGAAGCATCTTAAAAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAACATGCTGGTAAATGAGGCTAAAAATGTGCTGAAGCTTTGTGATTTCGGTAATGCCATGTTTGCTGGAAAGAACGAAGTTACACCGTACTTAGTCAGCCGCTTTTACCGTGCCCCTGAAATAATTCTTGGCTTGTCTTATGATCATCCATTGGATATCTGGTCAGTTGGTTGCTGTTTGTACGAACTCTCTACCGGAAAAGTTCTTTTTCCTGGTGCTACAAACAATGATATGCTACGTCTTCACATGGAATTGAAAGGCCCATTCCCAAAGAAGATGCTTCGGAAGGGAGCATTTACCCATCAACATTTTGATCAGGATCTGAACTTCCATGCCACAGAAGATGATCCTGTTACAAAGAAGACTATCAAACGGGTGATTCTCAATATAAAGCCAAAAGATATTGGATCGATTATTACAGGTTCTTCTGGTGAGGATCCAAAGATGTTAGCTGATTTTAAAGATCTTTTAGATAAAATGTTTGTGTTGGATCCAGACAAGAGGTTGACAGTATCACAAGCTTTGAGCCATCCATTCATCACTGTTTTGGCATGGTTGAAGTCAAAAGGGGTGATGTTTGGTCAGGAGTACTCATTACTGGCGGGTTCTTTCAGTGGAGTGTACTGTTTCTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016310 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase TBPIP

Protein Analysis

1075

Amino Acids

123.72

Weight (kDa)

7.03

Isoelectric Point (pI)

56.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13350 AT1G13350 AT1G13350 AT3G25840 AT3G25840 AT3G53640
fragaria_vesca	FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640
malus_domestica	MD13G1043800.v1.1 MD16G1044600.v1.1
prunus_persica	Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1
pyrus_communis	pycom16g03900
rosa_chinensis	RchiOBHm_Chr4g0435481
rosa_laevigata	RLG00000006589
rosa_multiflora	Rmu_sc0001940.1_g000027
rosa_roxburghii	Rroxscaffold_5G00376710
rosa_rugosa	Rorug04G0285400 Rorug04G0285500
rosa_samantha	Rh4AG341100 Rh4BG349300 Rh4CG364000 Rh4DG343600
rosa_wichuraiana	Rw4G029760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	293
AatII	GACGTC	1 cut(s)	1973
AccB1I	GGYRCC	2 cut(s)	212, 1976
AccB7I	CCANNNNNTGG	1 cut(s)	713
AccII	CGCG	2 cut(s)	141, 357
AciI	CCGC	7 cut(s)	37, 188, 598, 771, 838, 2689, 3191
AcoI	YGGCCR	3 cut(s)	3, 159, 2331
AcsI	RAATTY	4 cut(s)	255, 384, 453, 2398
AcuI	CTGAAG	3 cut(s)	192, 2561, 2642
AcyI	GRCGYC	2 cut(s)	294, 1970
AfaI	GTAC	8 cut(s)	747, 1999, 2144, 2309, 2678, 2771, 3179, 3212
AfiI	CCNNNNNNNGG	5 cut(s)	713, 1306, 1369, 1595, 2161
AflII	CTTAAG	1 cut(s)	2492
AgeI	ACCGGT	2 cut(s)	573, 2154
AjiI	CACGTC	1 cut(s)	241
AjnI	CCWGG	2 cut(s)	1509, 2800
AjuI	GAANNNNNNNTTGG	2 cut(s)	2700, 2732
AleI	CACNNNNGTG	1 cut(s)	435
AloI	GAACNNNNNNTCC	2 cut(s)	2076, 2108
Alw21I	GWGCWC	1 cut(s)	432
AlwNI	CAGNNNCTG	3 cut(s)	905, 1883, 2911
Ama87I	CYCGRG	1 cut(s)	474
AoxI	GGCC	9 cut(s)	3, 42, 63, 159, 227, 858, 1629, 2331, 2848
ApeKI	GCWGC	3 cut(s)	129, 1565, 2195
ApoI	RAATTY	4 cut(s)	255, 384, 453, 2398
AsiGI	ACCGGT	2 cut(s)	573, 2154
Asp700I	GAANNNNTTC	2 cut(s)	2439, 2712
AspLEI	GCGC	4 cut(s)	84, 141, 2376, 2481
AspS9I	GGNCC	5 cut(s)	42, 859, 1297, 1629, 2849
AsuC2I	CCSGG	1 cut(s)	41
AsuII	TTCGAA	1 cut(s)	2095
AvaI	CYCGRG	1 cut(s)	474
AvaII	GGWCC	1 cut(s)	1297
BaeGI	GKGCMC	1 cut(s)	2704
BaeI	ACNNNNGTAYC	2 cut(s)	885, 918
BalI	TGGCCA	2 cut(s)	5, 2333
BamHI	GGATCC	2 cut(s)	3025, 3079
BanI	GGYRCC	2 cut(s)	212, 1976
BauI	CACGAG	1 cut(s)	759
BbsI	GAAGAC	8 cut(s)	243, 308, 1446, 1587, 1620, 2105, 2822, 2957
Bbv12I	GWGCWC	1 cut(s)	432
BbvCI	CCTCAGC	2 cut(s)	1794, 1938
BbvI	GCAGC	3 cut(s)	141, 1552, 2182
BccI	CCATC	8 cut(s)	111, 715, 763, 1130, 1883, 2081, 2898, 3126
BceAI	ACGGC	2 cut(s)	146, 307
BciT130I	CCWGG	2 cut(s)	1511, 2802
BciVI	GTATCC	1 cut(s)	1039
BclI	TGATCA	3 cut(s)	811, 2731, 2902
BcnI	CCSGG	1 cut(s)	41
BfaI	CTAG	4 cut(s)	225, 495, 981, 1962
BfmI	CTRYAG	5 cut(s)	433, 897, 906, 1566, 2146
BfoI	RGCGCY	2 cut(s)	85, 2377
BfrI	CTTAAG	1 cut(s)	2492
BfuI	GTATCC	1 cut(s)	1039
BglII	AGATCT	3 cut(s)	1663, 2015, 3052
BisI	GCNGC	6 cut(s)	130, 189, 599, 1566, 2196, 2689
BlpI	GCTNAGC	1 cut(s)	1647
BlsI	GCNGC	6 cut(s)	131, 190, 600, 1567, 2197, 2690
BmcAI	AGTACT	1 cut(s)	3179
Bme1390I	CCNGG	3 cut(s)	41, 1511, 2802
Bme18I	GGWCC	1 cut(s)	1297
BmeT110I	CYCGRG	1 cut(s)	474
BmgBI	CACGTC	1 cut(s)	241
BmgT120I	GGNCC	5 cut(s)	42, 859, 1297, 1629, 2849
BmiI	GGNNCC	5 cut(s)	214, 1298, 1978, 3027, 3081
BmrFI	CCNGG	3 cut(s)	41, 1511, 2802
BmrI	ACTGGG	4 cut(s)	495, 1992, 2051, 2134
BmsI	GCATC	6 cut(s)	34, 310, 2122, 2164, 2554, 2856
BmuI	ACTGGG	4 cut(s)	495, 1992, 2051, 2134
BpiI	GAAGAC	8 cut(s)	243, 308, 1446, 1587, 1620, 2105, 2822, 2957
Bpu10I	CCTNAGC	2 cut(s)	1794, 1938
Bpu1102I	GCTNAGC	1 cut(s)	1647
Bpu14I	TTCGAA	1 cut(s)	2095
BpuEI	CTTGAG	3 cut(s)	281, 501, 1818
BpuMI	CCSGG	1 cut(s)	41
Bsa29I	ATCGAT	1 cut(s)	2999
BsaAI	YACGTR	1 cut(s)	2291
BsaBI	GATNNNNATC	1 cut(s)	2907
BsaHI	GRCGYC	2 cut(s)	294, 1970
BsaI	GGTCTC	1 cut(s)	2045
BsaJI	CCNNGG	1 cut(s)	741
BsaWI	WCCGGW	5 cut(s)	573, 1299, 1362, 2154, 2783
BsaXI	ACNNNNNCTCC	2 cut(s)	2076, 2106
Bsc4I	CCNNNNNNNGG	5 cut(s)	713, 1306, 1369, 1595, 2161
Bse118I	RCCGGY	4 cut(s)	157, 311, 573, 2154
Bse1I	ACTGG	6 cut(s)	490, 504, 1987, 2057, 2129, 3192
Bse3DI	GCAATG	1 cut(s)	2302
Bse8I	GATNNNNATC	1 cut(s)	2907
BseBI	CCWGG	2 cut(s)	1511, 2802
BseCI	ATCGAT	1 cut(s)	2999
BseDI	CCNNGG	1 cut(s)	741
BseJI	GATNNNNATC	1 cut(s)	2907
BseLI	CCNNNNNNNGG	5 cut(s)	713, 1306, 1369, 1595, 2161
BseMI	GCAATG	1 cut(s)	2302
BseMII	CTCAG	4 cut(s)	1638, 1755, 1808, 1952
BseNI	ACTGG	6 cut(s)	490, 504, 1987, 2057, 2129, 3192
BseRI	GAGGAG	7 cut(s)	171, 278, 281, 602, 869, 1069, 1697
BseSI	GKGCMC	1 cut(s)	2704
BseX3I	CGGCCG	1 cut(s)	159
BseXI	GCAGC	3 cut(s)	141, 1552, 2182
BsgI	GTGCAG	1 cut(s)	1896
Bsh1236I	CGCG	2 cut(s)	141, 357
Bsh1285I	CGRYCG	3 cut(s)	162, 1036, 1848
BshFI	GGCC	9 cut(s)	5, 44, 65, 161, 229, 860, 1631, 2333, 2850
BshNI	GGYRCC	2 cut(s)	212, 1976
BshTI	ACCGGT	2 cut(s)	573, 2154
BshVI	ATCGAT	1 cut(s)	2999
BsiEI	CGRYCG	3 cut(s)	162, 1036, 1848
BsiHKAI	GWGCWC	1 cut(s)	432
BsiHKCI	CYCGRG	1 cut(s)	474
BsiSI	CCGG	8 cut(s)	40, 158, 312, 574, 1300, 1363, 2155, 2784
BslFI	GGGAC	5 cut(s)	1190, 1274, 1310, 1331, 1361
BslI	CCNNNNNNNGG	5 cut(s)	713, 1306, 1369, 1595, 2161
BsmBI	CGTCTC	2 cut(s)	868, 1194
BsmFI	GGGAC	5 cut(s)	1190, 1274, 1310, 1331, 1361
BsnI	GGCC	9 cut(s)	5, 44, 65, 161, 229, 860, 1631, 2333, 2850
Bso31I	GGTCTC	1 cut(s)	2045
BsoBI	CYCGRG	1 cut(s)	474
Bsp119I	TTCGAA	1 cut(s)	2095
Bsp1286I	GDGCHC	2 cut(s)	432, 2704
Bsp1407I	TGTACA	1 cut(s)	2307
Bsp1720I	GCTNAGC	1 cut(s)	1647
Bsp68I	TCGCGA	1 cut(s)	357
BspACI	CCGC	7 cut(s)	37, 188, 598, 771, 838, 2689, 3191
BspANI	GGCC	9 cut(s)	5, 44, 65, 161, 229, 860, 1631, 2333, 2850
BspCNI	CTCAG	4 cut(s)	1639, 1756, 1807, 1951
BspDI	ATCGAT	1 cut(s)	2999
BspFNI	CGCG	2 cut(s)	141, 357
BspHI	TCATGA	2 cut(s)	883, 2116
BspLI	GGNNCC	5 cut(s)	214, 1298, 1978, 3027, 3081
BspMAI	CTGCAG	2 cut(s)	901, 1570
BspQI	GCTCTTC	1 cut(s)	1221
BspT104I	TTCGAA	1 cut(s)	2095
BspT107I	GGYRCC	2 cut(s)	212, 1976
BspTI	CTTAAG	1 cut(s)	2492
BspTNI	GGTCTC	1 cut(s)	2045
BsrDI	GCAATG	1 cut(s)	2302
BsrFI	RCCGGY	4 cut(s)	157, 311, 573, 2154
BsrGI	TGTACA	1 cut(s)	2307
BsrI	ACTGG	6 cut(s)	490, 504, 1987, 2057, 2129, 3192
BssAI	RCCGGY	4 cut(s)	157, 311, 573, 2154
BssECI	CCNNGG	1 cut(s)	741
BssNI	GRCGYC	2 cut(s)	294, 1970
BssSI	CACGAG	1 cut(s)	759
BssT1I	CCWWGG	1 cut(s)	741
Bst2BI	CACGAG	1 cut(s)	759
Bst2UI	CCWGG	2 cut(s)	1511, 2802
Bst6I	CTCTTC	8 cut(s)	52, 587, 846, 1216, 1221, 1617, 1650, 2445
BstACI	GRCGYC	2 cut(s)	294, 1970
BstAFI	CTTAAG	1 cut(s)	2492
BstAUI	TGTACA	1 cut(s)	2307
BstBAI	YACGTR	1 cut(s)	2291
BstBI	TTCGAA	1 cut(s)	2095
BstC8I	GCNNGC	5 cut(s)	7, 32, 159, 313, 1704
BstDEI	CTNAG	6 cut(s)	1647, 1711, 1764, 1794, 1938, 2680
BstFNI	CGCG	2 cut(s)	141, 357
BstH2I	RGCGCY	2 cut(s)	85, 2377
BstHHI	GCGC	4 cut(s)	84, 141, 2376, 2481
BstMCI	CGRYCG	3 cut(s)	162, 1036, 1848
BstNI	CCWGG	2 cut(s)	1511, 2802
BstNSI	RCATGY	1 cut(s)	2596
BstSCI	CCNGG	3 cut(s)	39, 1509, 2800
BstSFI	CTRYAG	5 cut(s)	433, 897, 906, 1566, 2146
BstSLI	GKGCMC	1 cut(s)	2704
BstSNI	TACGTA	1 cut(s)	2291
BstUI	CGCG	2 cut(s)	141, 357
BstV1I	GCAGC	3 cut(s)	141, 1552, 2182
BstV2I	GAAGAC	8 cut(s)	243, 308, 1446, 1587, 1620, 2105, 2822, 2957
BstX2I	RGATCY	8 cut(s)	1663, 1828, 2015, 2359, 2908, 3025, 3052, 3079
BstYI	RGATCY	8 cut(s)	1663, 1828, 2015, 2359, 2908, 3025, 3052, 3079
BstZI	CGGCCG	1 cut(s)	159
Bsu15I	ATCGAT	1 cut(s)	2999
BsuI	GTATCC	1 cut(s)	1039
BsuRI	GGCC	9 cut(s)	5, 44, 65, 161, 229, 860, 1631, 2333, 2850
BsuTUI	ATCGAT	1 cut(s)	2999
BtgZI	GCGATG	2 cut(s)	11, 89
BtrI	CACGTC	1 cut(s)	241
BtsI	GCAGTG	1 cut(s)	894
BtsIMutI	CAGTG	7 cut(s)	430, 894, 1980, 2377, 2537, 3129, 3208
BtuMI	TCGCGA	1 cut(s)	357
Cac8I	GCNNGC	5 cut(s)	7, 32, 159, 313, 1704
CaiI	CAGNNNCTG	3 cut(s)	905, 1883, 2911
CciI	TCATGA	2 cut(s)	883, 2116
CfoI	GCGC	4 cut(s)	84, 141, 2376, 2481
Cfr10I	RCCGGY	4 cut(s)	157, 311, 573, 2154
Cfr13I	GGNCC	5 cut(s)	42, 859, 1297, 1629, 2849
ClaI	ATCGAT	1 cut(s)	2999
CseI	GACGC	1 cut(s)	283
Csp6I	GTAC	8 cut(s)	746, 1998, 2143, 2308, 2677, 2770, 3178, 3211
CspAI	ACCGGT	2 cut(s)	573, 2154
CspCI	CAANNNNNGTGG	2 cut(s)	1969, 2004
CviQI	GTAC	8 cut(s)	746, 1998, 2143, 2308, 2677, 2770, 3178, 3211
DdeI	CTNAG	6 cut(s)	1647, 1711, 1764, 1794, 1938, 2680
DraI	TTTAAA	1 cut(s)	3049
DrdI	GACNNNNNNGTC	1 cut(s)	293
DseDI	GACNNNNNNGTC	1 cut(s)	293
EaeI	YGGCCR	3 cut(s)	3, 159, 2331
EagI	CGGCCG	1 cut(s)	159
Eam1104I	CTCTTC	8 cut(s)	52, 587, 846, 1216, 1221, 1617, 1650, 2445
EarI	CTCTTC	8 cut(s)	52, 587, 846, 1216, 1221, 1617, 1650, 2445
EclXI	CGGCCG	1 cut(s)	159
Eco105I	TACGTA	1 cut(s)	2291
Eco130I	CCWWGG	1 cut(s)	741
Eco31I	GGTCTC	1 cut(s)	2045
Eco32I	GATATC	3 cut(s)	151, 2041, 2746
Eco47I	GGWCC	1 cut(s)	1297
Eco52I	CGGCCG	1 cut(s)	159
Eco57I	CTGAAG	3 cut(s)	192, 2561, 2642
Eco88I	CYCGRG	1 cut(s)	474
EcoO109I	RGGNCCY	1 cut(s)	859
EcoRI	GAATTC	1 cut(s)	453
EcoRII	CCWGG	2 cut(s)	1509, 2800
EcoRV	GATATC	3 cut(s)	151, 2041, 2746
EcoT14I	CCWWGG	1 cut(s)	741
ErhI	CCWWGG	1 cut(s)	741
Esp3I	CGTCTC	2 cut(s)	868, 1194
FalI	AAGNNNNNCTT	2 cut(s)	2198, 2230
FaqI	GGGAC	5 cut(s)	1190, 1274, 1310, 1331, 1361
FauI	CCCGC	3 cut(s)	764, 845, 3184
FauNDI	CATATG	3 cut(s)	808, 2445, 2515
FbaI	TGATCA	3 cut(s)	811, 2731, 2902
Fnu4HI	GCNGC	6 cut(s)	130, 189, 599, 1566, 2196, 2689
Fsp4HI	GCNGC	6 cut(s)	130, 189, 599, 1566, 2196, 2689
FspBI	CTAG	4 cut(s)	225, 495, 981, 1962
GlaI	GCGC	4 cut(s)	83, 140, 2375, 2480
GluI	GCNGC	6 cut(s)	130, 189, 599, 1566, 2196, 2689
HaeII	RGCGCY	2 cut(s)	85, 2377
HaeIII	GGCC	9 cut(s)	5, 44, 65, 161, 229, 860, 1631, 2333, 2850
HapII	CCGG	8 cut(s)	40, 158, 312, 574, 1300, 1363, 2155, 2784
HgaI	GACGC	1 cut(s)	283
HhaI	GCGC	4 cut(s)	84, 141, 2376, 2481
Hin1I	GRCGYC	2 cut(s)	294, 1970
Hin6I	GCGC	4 cut(s)	82, 139, 2374, 2479
HinP1I	GCGC	4 cut(s)	82, 139, 2374, 2479
HincII	GTYRAC	2 cut(s)	166, 3096
HindII	GTYRAC	2 cut(s)	166, 3096
HindIII	AAGCTT	2 cut(s)	2624, 3108
HpaII	CCGG	8 cut(s)	40, 158, 312, 574, 1300, 1363, 2155, 2784
Hpy166II	GTNNAC	5 cut(s)	166, 752, 2261, 3096, 3211
Hpy8I	GTNNAC	5 cut(s)	166, 752, 2261, 3096, 3211
Hpy99I	CGWCG	3 cut(s)	79, 290, 293
HpyCH4IV	ACGT	7 cut(s)	240, 748, 877, 926, 1970, 2290, 2827
HpyCH4V	TGCA	6 cut(s)	899, 1568, 1877, 2135, 2234, 2537
HpyF3I	CTNAG	6 cut(s)	1647, 1711, 1764, 1794, 1938, 2680
HpySE526I	ACGT	7 cut(s)	240, 748, 877, 926, 1970, 2290, 2827
Hsp92I	GRCGYC	2 cut(s)	294, 1970
HspAI	GCGC	4 cut(s)	82, 139, 2374, 2479
KroI	GCCGGC	2 cut(s)	157, 311
KroNI	GCCGGC	2 cut(s)	159, 313
Ksp22I	TGATCA	3 cut(s)	811, 2731, 2902
LguI	GCTCTTC	1 cut(s)	1221
LmnI	GCTCC	7 cut(s)	184, 792, 839, 1110, 1239, 1290, 2879
Lsp1109I	GCAGC	3 cut(s)	141, 1552, 2182
LweI	GCATC	6 cut(s)	34, 310, 2122, 2164, 2554, 2856
MaeI	CTAG	4 cut(s)	225, 495, 981, 1962
MaeII	ACGT	7 cut(s)	240, 748, 877, 926, 1970, 2290, 2827
MflI	RGATCY	8 cut(s)	1663, 1828, 2015, 2359, 2908, 3025, 3052, 3079
MhlI	GDGCHC	2 cut(s)	432, 2704
MlsI	TGGCCA	2 cut(s)	5, 2333
MluNI	TGGCCA	2 cut(s)	5, 2333
MlyI	GAGTC	5 cut(s)	14, 335, 926, 1696, 1775
MmeI	TCCRAC	2 cut(s)	2041, 3057
Mox20I	TGGCCA	2 cut(s)	5, 2333
MroNI	GCCGGC	2 cut(s)	157, 311
MroXI	GAANNNNTTC	2 cut(s)	2439, 2712
MscI	TGGCCA	2 cut(s)	5, 2333
MseI	TTAA	6 cut(s)	2244, 2280, 2465, 2493, 2550, 3048
MslI	CAYNNNNRTG	6 cut(s)	123, 435, 462, 558, 651, 966
Msp20I	TGGCCA	2 cut(s)	5, 2333
MspA1I	CMGCKG	1 cut(s)	1856
MspCI	CTTAAG	1 cut(s)	2492
MspI	CCGG	8 cut(s)	40, 158, 312, 574, 1300, 1363, 2155, 2784
MspR9I	CCNGG	3 cut(s)	41, 1511, 2802
MvaI	CCWGG	2 cut(s)	1511, 2802
MvnI	CGCG	2 cut(s)	141, 357
NaeI	GCCGGC	2 cut(s)	159, 313
NciI	CCSGG	1 cut(s)	41
NdeI	CATATG	3 cut(s)	808, 2445, 2515
NgoMIV	GCCGGC	2 cut(s)	157, 311
NlaIV	GGNNCC	5 cut(s)	214, 1298, 1978, 3027, 3081
NmeAIII	GCCGAG	2 cut(s)	91, 349
NmuCI	GTSAC	8 cut(s)	95, 116, 281, 437, 968, 1157, 1734, 1767
NruI	TCGCGA	1 cut(s)	357
NspI	RCATGY	1 cut(s)	2596
NspV	TTCGAA	1 cut(s)	2095
OliI	CACNNNNGTG	1 cut(s)	435
PagI	TCATGA	2 cut(s)	883, 2116
PciSI	GCTCTTC	1 cut(s)	1221
PcsI	WCGNNNNNNNCGW	4 cut(s)	112, 282, 291, 2262
PdiI	GCCGGC	2 cut(s)	159, 313
PdmI	GAANNNNTTC	2 cut(s)	2439, 2712
PfeI	GAWTC	6 cut(s)	608, 1081, 1850, 2435, 2449, 2968
PflFI	GACNNNGTC	1 cut(s)	293
PflMI	CCANNNNNTGG	1 cut(s)	713
PinAI	ACCGGT	2 cut(s)	573, 2154
PkrI	GCNGC	6 cut(s)	131, 190, 600, 1567, 2197, 2690
Ple19I	CGATCG	1 cut(s)	1036
PleI	GAGTC	5 cut(s)	14, 334, 926, 1695, 1774
PpsI	GAGTC	5 cut(s)	14, 334, 926, 1695, 1774
Ppu21I	YACGTR	1 cut(s)	2291
Psp6I	CCWGG	2 cut(s)	1509, 2800
PspGI	CCWGG	2 cut(s)	1509, 2800
PspN4I	GGNNCC	5 cut(s)	214, 1298, 1978, 3027, 3081
PspPI	GGNCC	5 cut(s)	42, 859, 1297, 1629, 2849
PstI	CTGCAG	2 cut(s)	901, 1570
PstNI	CAGNNNCTG	3 cut(s)	905, 1883, 2911
PsuI	RGATCY	8 cut(s)	1663, 1828, 2015, 2359, 2908, 3025, 3052, 3079
PsyI	GACNNNGTC	1 cut(s)	293
PvuI	CGATCG	1 cut(s)	1036
PvuII	CAGCTG	1 cut(s)	1856
RruI	TCGCGA	1 cut(s)	357
RsaI	GTAC	8 cut(s)	747, 1999, 2144, 2309, 2678, 2771, 3179, 3212
RsaNI	GTAC	8 cut(s)	746, 1998, 2143, 2308, 2677, 2770, 3178, 3211
RseI	CAYNNNNRTG	6 cut(s)	123, 435, 462, 558, 651, 966
SapI	GCTCTTC	1 cut(s)	1221
SaqAI	TTAA	6 cut(s)	2244, 2280, 2465, 2493, 2550, 3048
SatI	GCNGC	6 cut(s)	130, 189, 599, 1566, 2196, 2689
Sau96I	GGNCC	5 cut(s)	42, 859, 1297, 1629, 2849
ScaI	AGTACT	1 cut(s)	3179
SchI	GAGTC	5 cut(s)	14, 335, 926, 1696, 1775
ScrFI	CCNGG	3 cut(s)	41, 1511, 2802
SduI	GDGCHC	2 cut(s)	432, 2704
SfaNI	GCATC	6 cut(s)	34, 310, 2122, 2164, 2554, 2856
SfcI	CTRYAG	5 cut(s)	433, 897, 906, 1566, 2146
SfuI	TTCGAA	1 cut(s)	2095
SinI	GGWCC	1 cut(s)	1297
SmiMI	CAYNNNNRTG	6 cut(s)	123, 435, 462, 558, 651, 966
SmlI	CTYRAG	4 cut(s)	260, 516, 1833, 2492
SmoI	CTYRAG	4 cut(s)	260, 516, 1833, 2492
SnaBI	TACGTA	1 cut(s)	2291
SsiI	CCGC	7 cut(s)	37, 188, 598, 771, 838, 2689, 3191
SspI	AATATT	1 cut(s)	2485
SspMI	CTAG	4 cut(s)	225, 495, 981, 1962
StyD4I	CCNGG	3 cut(s)	39, 1509, 2800
StyI	CCWWGG	1 cut(s)	741
TaiI	ACGT	7 cut(s)	243, 751, 880, 929, 1973, 2293, 2830
TaqII	GACCGA	1 cut(s)	1862
TatI	WGTACW	3 cut(s)	2307, 3177, 3210
TauI	GCSGC	3 cut(s)	191, 601, 2691
TfiI	GAWTC	6 cut(s)	608, 1081, 1850, 2435, 2449, 2968
Tru1I	TTAA	6 cut(s)	2244, 2280, 2465, 2493, 2550, 3048
Tru9I	TTAA	6 cut(s)	2244, 2280, 2465, 2493, 2550, 3048
TscAI	CASTG	7 cut(s)	437, 901, 1987, 2384, 2544, 3136, 3208
TseFI	GTSAC	8 cut(s)	95, 116, 281, 437, 968, 1157, 1734, 1767
TseI	GCWGC	3 cut(s)	129, 1565, 2195
Tsp45I	GTSAC	8 cut(s)	95, 116, 281, 437, 968, 1157, 1734, 1767
TspGWI	ACGGA	5 cut(s)	1265, 1286, 2217, 2339, 2444
TspRI	CASTG	7 cut(s)	437, 901, 1987, 2384, 2544, 3136, 3208
Tth111I	GACNNNGTC	1 cut(s)	293
Van91I	CCANNNNNTGG	1 cut(s)	713
Vha464I	CTTAAG	1 cut(s)	2492
VpaK11BI	GGWCC	1 cut(s)	1297
XapI	RAATTY	4 cut(s)	255, 384, 453, 2398
XceI	RCATGY	1 cut(s)	2596
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2745
XmnI	GAANNNNTTC	2 cut(s)	2439, 2712
XspI	CTAG	4 cut(s)	225, 495, 981, 1962
ZraI	GACGTC	1 cut(s)	1971
ZrmI	AGTACT	1 cut(s)	3179

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.