Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0002761

Physical Location & Seq

Genomic Coordinates Forward (+)

51137098 .. 51142453

Gene Structure 5356 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG349300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3090 bp

ATGTCCGGCGACGACCACGATTCGCGTCGCAAGCACCGCCGCGATCATTCCGACGACGACGCCGAGAAGTCTTCCAAGCGCCACAAGCACCGTCACCACCACCGCCACCACCGTCACCGCCACAGCAGCAAGAAGCGCGAAGAAGAGAGCAAGGCGGCCGCGGGTGAGGATATCGAAGCTCCTCCTCCGCCGCCGCCTGTTATGTTGTCTCGTTCCAATAGTCCTCCTCCTCGGCCGGCTGAGGACGTCGAGGAAGGTGAAATTCTTGAGGACGGTGCCGGTGGCCGCGACGACGGCGTTTTGGAAACGAAAGCGGACTCTGGTGCCGAGTCTGGTGAAATTGAAGCTCCTGGAGTTCGCGAACGTTCTGATAAGCGAAATCTGGGACTTTATAGTGACAGTACCATGGATAAGAGCTCAAAGACCTTGGGCAAAGAACTTCGTAGTGATGATGATCCCAGGAGTCCTATTGGGGGTAAGTCTCATAGTGAGGCCGGCTTGCCTCAAAATTCTAGTGCCGAGCCTCGCGAAGAATCAGTTTCCAGAGTTGACCTTGAGGATCATGCCAATGGGAATTTAGAGAAGAGGCGGCACCTGGAATCTGGGTCCCCTTCTAAAGGAGGTGGTCATCGAAAGAAATACTATAGTGAAAATGTGGATGATGATAGAAGCAAATTAGCTAATAAAGAAAAGTCACCCTATAGAAGTAGTGGTGACAGGTATGGTGAAGTGTTGCGTGGCAGGAGCAGATCAGGGTCACATGATCATGTGAGAGAGAGATCTCGTTCCCGTAGTATAGTTGAAGAGGAGGCACCATCTAGAAGAAGATCTCATTCTCGCAGTATGTTAGAAGAGGAAGCTCTTTCTAAAAGGAGACGTTATCATGATCGAGAAATCTCAGTATATGCCGAGAAAAGCAAGGCCGCACACAACTCTGATGATGAAGGTATGGTGAGGGATGATGAAAGGGAACACAGTATTAGTTATAGCAGATACTCTGGATTTGATCGCAGTCGAGAGAGAGAGAGGAGTAGGGAGAGGGAGGTGGACAGGGTTCGGAGAAGGGAGAAAGAACTAGAGAGGAACAGGGGCAGGGATCGGAGAAGGGAGAAAGAAAGAGAAAGGAGTAGTGACAGGGATTTGTTTAGGGACAGGAAAAGGGGAATTGGACGTGGTGATAGCAGTGAAAGGGTGGTTGATACGGAAAGTAGAAGGGAAGAGCGACATAGAAGCAGGGACAGAGAGAACAGGGATAGGACAAGGGAGGATGATGTTGATAGGAGCAGGGGCAGGGGCAAGCCTGCTGACAGAGAGAGAGATATGGAGAGGGACCGGGATCGGGATAGGGATAGGGACAGAGTAACAGACCGGAAATGGGAGAGGCGGGATGATAGATATAGGGACAAGGGTCGAGATATGGAGAGGGAGAGAAATGAAACTGAAAGTGGATATGGAACTCGAGACAAGCATAATCATTCTGGTCAATCAAGGTATGAAGAAAAAGAATATAACCAGGATGGTTCAACAAAATCTGATCAAGCAGAAGTTCAGCTAGAAAGAGATGAAGATGAACAAGGAGATGATGAAGAGTTGGTCAGTTTGCAAGTTGCTGATCAGGAAGAGGAAGATCTTAACAGAATTAAGGAGGAAAGTAGGAGGAGAAAGCAAGCAATCTTGGAAAAATATAAAAGTCAGCAGTCACAGTCCCAGCAAAAGACCGACGTACAAATTGAGTCACAGTTACAGCAACCCACTCAATTAGAGGGTCAAAAAGATCATCTGGATCAATCAACAGGGGTTGCCAAATCCAGAGCAGAAGTTGATGGTGCTAGGAGTTCTGGAGGAGTATATATGGCTGAAGCATTTTCTACTACAGCTCGTCAGAATGGTGCCCCAGGGCTTGGAGAGGGTACTCCAAAGAGTGAAAGCTCTGGTGGCTCAGAACCCAAAAAAGAAAGAGCTGATGGTATTTTATGCGATGATATCTTTGGTGAGACCCCAACTGGAGTTCGAAAATTGGACAAAGGAGATGCTGTACGAATTGAAAGGAGTGGTCTCCGTGACAACTGGGATGATGCAGAAGGGTACTACAGCTACCGGTTTGGGGAGTTACTTGATGGTCGATATGAGATTACCGCTGCTCATGGAAAAGGCGTGTTTTCAACTGTTGTTCGTGCAAAGAACCTTAAGGTTGGTAATGGTGAACCAGAGGAAGTGGCAATTAAGATTATTCGTAGCAATGATACTATGTACAAGGCTGGTATGACTGAGTTGGCCATATTGAAGAAATTAGTAGGTCAAGATCCAGACAATAAGCGCTATTGTGTTCGTTTTCTATCAAGTTTCAAGTATCGAAATCATCTTTGTTTAGTTTTTGAATCTCTGCATATGAATCTTCGTGAGCTTTTAAAGAAGTTTGGACGCAATATTGGTCTGAATCTAACTGCGGTGAGAGTATATGCTAAACAACTCTTGATTGCATTGAAGCATCTCAAAAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAACATGCTGGTAAATGAAGCAAAAAACGTTCTGAAGCTTTGTGATTTTGGTAACGCCATGTTTGCTGGCAAGAATGAAGTTACACCGTACCTTGTGAGCCGATTTTATCGGGCCCCTGAAATAATTCTTGGCTTGCCTTATGATCATCCACTGGATATCTGGTCTGTTGGTTGCTGTTTGTTCGAACTTTATACTGGAAAAGTTCTTTTTCCTGGTGCTACGAACAATGATATGCTACGTCTTCACATGGAATTGAAAGGCCCTTTCCCTAAGAAGATGCTTCGGAAGGCAACATTTACTTATCAAAATTTCGATCAGGATCTGAACTTCCATGCCACAGAAGATGATCCTGTTACAAAAAAGGTTATTAAACGCGTGATTCTCAACATAAAGCCAAAAGATATCGGATCAATGATCGCAGGTTCTCCTGGCGAGGATCCAGATCCCAAGATATTAGCTGATTTTAAAGATCTTTTAGATAAAATGTTTGTGCTGGATCCAGACAAGAGGTTGACAGTATCACAAGGTTTGAATCATCCATTCATCACTGGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016310 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase TBPIP

Protein Analysis

1029

Amino Acids

118.14

Weight (kDa)

7.93

Isoelectric Point (pI)

59.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	710 - 1026	3e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	715 - 925	4.5e-19	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13350 AT1G13350 AT1G13350 AT3G25840 AT3G25840 AT3G53640
fragaria_vesca	FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640
malus_domestica	MD13G1043800.v1.1 MD16G1044600.v1.1
prunus_persica	Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1
pyrus_communis	pycom16g03900
rosa_chinensis	RchiOBHm_Chr4g0435481
rosa_laevigata	RLG00000006589
rosa_multiflora	Rmu_sc0001940.1_g000027
rosa_roxburghii	Rroxscaffold_5G00376710
rosa_rugosa	Rorug04G0285400 Rorug04G0285500
rosa_samantha	Rh4AG341100 Rh4BG349300 Rh4CG364000 Rh4DG343600
rosa_wichuraiana	Rw4G029760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	249
Acc36I	ACCTGC	1 cut(s)	2942
AccB1I	GGYRCC	5 cut(s)	275, 323, 591, 811, 1889
AccB7I	CCANNNNNTGG	1 cut(s)	1901
AccII	CGCG	8 cut(s)	25, 42, 138, 161, 288, 360, 528, 2907
AclI	AACGTT	2 cut(s)	364, 2559
AcoI	YGGCCR	4 cut(s)	156, 233, 283, 2274
AcsI	RAATTY	4 cut(s)	261, 508, 574, 2839
AcuI	CTGAAG	2 cut(s)	1878, 2585
AcyI	GRCGYC	2 cut(s)	60, 246
AfaI	GTAC	7 cut(s)	403, 1725, 1912, 2037, 2087, 2252, 2621
AfeI	AGCGCT	1 cut(s)	2318
AfiI	CCNNNNNNNGG	6 cut(s)	473, 617, 1339, 1375, 1901, 2104
AflII	CTTAAG	1 cut(s)	2186
AflIII	ACRYGT	1 cut(s)	2905
AgeI	ACCGGT	1 cut(s)	2097
AjiI	CACGTC	1 cut(s)	1172
AjnI	CCWGG	7 cut(s)	349, 458, 594, 1512, 1894, 2743, 2959
AjuI	GAANNNNNNNTTGG	2 cut(s)	2643, 2675
Alw21I	GWGCWC	1 cut(s)	419
Alw26I	GTCTC	6 cut(s)	213, 486, 868, 1455, 1988, 2060
AlwNI	CAGNNNCTG	1 cut(s)	2854
Ama87I	CYCGRG	1 cut(s)	1458
Aor51HI	AGCGCT	1 cut(s)	2318
AoxI	GGCC	8 cut(s)	156, 233, 283, 492, 921, 2274, 2643, 2791
ApaI	GGGCCC	1 cut(s)	2647
ApeKI	GCWGC	2 cut(s)	126, 2138
ApoI	RAATTY	4 cut(s)	261, 508, 574, 2839
AsiGI	ACCGGT	1 cut(s)	2097
Asp700I	GAANNNNTTC	1 cut(s)	2655
AspLEI	GCGC	3 cut(s)	81, 138, 2319
AspS9I	GGNCC	5 cut(s)	606, 1330, 2643, 2644, 2792
AsuC2I	CCSGG	1 cut(s)	1334
AsuII	TTCGAA	2 cut(s)	2011, 2715
AvaI	CYCGRG	1 cut(s)	1458
AvaII	GGWCC	2 cut(s)	606, 1330
BaeGI	GKGCMC	2 cut(s)	1894, 2647
BalI	TGGCCA	1 cut(s)	2276
BamHI	GGATCC	2 cut(s)	2968, 3028
BanI	GGYRCC	5 cut(s)	275, 323, 591, 811, 1889
BanII	GRGCYC	2 cut(s)	419, 2647
BbsI	GAAGAC	2 cut(s)	63, 2765
Bbv12I	GWGCWC	1 cut(s)	419
BbvCI	CCTCAGC	1 cut(s)	240
BbvI	GCAGC	2 cut(s)	138, 2125
BccI	CCATC	5 cut(s)	823, 1511, 1817, 1958, 2111
BceAI	ACGGC	1 cut(s)	310
BciT130I	CCWGG	7 cut(s)	351, 460, 596, 1514, 1896, 2745, 2961
BclI	TGATCA	4 cut(s)	763, 1534, 1612, 2674
BcnI	CCSGG	1 cut(s)	1334
BcoDI	GTCTC	6 cut(s)	213, 486, 868, 1455, 1988, 2060
BfaI	CTAG	5 cut(s)	513, 819, 1076, 1553, 1830
BfmI	CTRYAG	4 cut(s)	643, 700, 1872, 2089
BfoI	RGCGCY	2 cut(s)	82, 2320
BfrI	CTTAAG	1 cut(s)	2186
BfuAI	ACCTGC	1 cut(s)	2942
BglII	AGATCT	4 cut(s)	779, 827, 1627, 3001
Bme1390I	CCNGG	8 cut(s)	351, 460, 596, 1334, 1514, 1896, 2745, 2961
Bme18I	GGWCC	2 cut(s)	606, 1330
BmeT110I	CYCGRG	1 cut(s)	1458
BmgBI	CACGTC	1 cut(s)	1172
BmgT120I	GGNCC	5 cut(s)	606, 1330, 2643, 2644, 2792
BmrFI	CCNGG	8 cut(s)	351, 460, 596, 1334, 1514, 1896, 2745, 2961
BmrI	ACTGGG	1 cut(s)	2077
BmsI	GCATC	4 cut(s)	2020, 2065, 2497, 2799
BmuI	ACTGGG	1 cut(s)	2077
BoxI	GACNNNNGTC	1 cut(s)	1407
BpiI	GAAGAC	2 cut(s)	63, 2765
BpmI	CTGGAG	3 cut(s)	372, 1860, 2025
Bpu10I	CCTNAGC	1 cut(s)	240
Bpu14I	TTCGAA	2 cut(s)	2011, 2715
BpuEI	CTTGAG	2 cut(s)	287, 575
BpuMI	CCSGG	1 cut(s)	1334
BsaBI	GATNNNNATC	3 cut(s)	453, 2850, 2973
BsaHI	GRCGYC	2 cut(s)	60, 246
BsaI	GGTCTC	2 cut(s)	1988, 2060
BsaJI	CCNNGG	7 cut(s)	159, 230, 405, 426, 458, 1894, 1895
BsaWI	WCCGGW	2 cut(s)	1368, 2097
BsaXI	ACNNNNNCTCC	2 cut(s)	2019, 2049
Bsc4I	CCNNNNNNNGG	6 cut(s)	473, 617, 1339, 1375, 1901, 2104
Bse118I	RCCGGY	4 cut(s)	235, 278, 494, 2097
Bse1I	ACTGG	5 cut(s)	2008, 2072, 2688, 2731, 3085
Bse3DI	GCAATG	1 cut(s)	2245
Bse8I	GATNNNNATC	3 cut(s)	453, 2850, 2973
BseBI	CCWGG	7 cut(s)	351, 460, 596, 1514, 1896, 2745, 2961
BseDI	CCNNGG	7 cut(s)	159, 230, 405, 426, 458, 1894, 1895
BseGI	GGATG	8 cut(s)	664, 964, 1273, 1393, 1522, 2077, 2677, 3067
BseJI	GATNNNNATC	3 cut(s)	453, 2850, 2973
BseLI	CCNNNNNNNGG	6 cut(s)	473, 617, 1339, 1375, 1901, 2104
BseMI	GCAATG	1 cut(s)	2245
BseMII	CTCAG	4 cut(s)	231, 912, 1953, 2259
BseNI	ACTGG	5 cut(s)	2008, 2072, 2688, 2731, 3085
BseRI	GAGGAG	8 cut(s)	171, 174, 216, 219, 821, 1042, 1672, 1857
BseSI	GKGCMC	2 cut(s)	1894, 2647
BseX3I	CGGCCG	2 cut(s)	156, 233
BseXI	GCAGC	2 cut(s)	138, 2125
BseYI	CCCAGC	1 cut(s)	1707
Bsh1236I	CGCG	8 cut(s)	25, 42, 138, 161, 288, 360, 528, 2907
Bsh1285I	CGRYCG	2 cut(s)	159, 236
BshFI	GGCC	8 cut(s)	158, 235, 285, 494, 923, 2276, 2645, 2793
BshNI	GGYRCC	5 cut(s)	275, 323, 591, 811, 1889
BshTI	ACCGGT	1 cut(s)	2097
BsiEI	CGRYCG	2 cut(s)	159, 236
BsiHKAI	GWGCWC	1 cut(s)	419
BsiHKCI	CYCGRG	1 cut(s)	1458
BsiSI	CCGG	7 cut(s)	6, 236, 279, 495, 1333, 1369, 2098
BslFI	GGGAC	8 cut(s)	399, 592, 1163, 1250, 1343, 1367, 1415, 1690
BslI	CCNNNNNNNGG	6 cut(s)	473, 617, 1339, 1375, 1901, 2104
BsmAI	GTCTC	6 cut(s)	213, 486, 868, 1455, 1988, 2060
BsmBI	CGTCTC	1 cut(s)	868
BsmFI	GGGAC	8 cut(s)	399, 592, 1163, 1250, 1343, 1367, 1415, 1690
BsnI	GGCC	8 cut(s)	158, 235, 285, 494, 923, 2276, 2645, 2793
Bso31I	GGTCTC	2 cut(s)	1988, 2060
BsoBI	CYCGRG	1 cut(s)	1458
Bsp119I	TTCGAA	2 cut(s)	2011, 2715
Bsp120I	GGGCCC	1 cut(s)	2643
Bsp1286I	GDGCHC	3 cut(s)	419, 1894, 2647
Bsp1407I	TGTACA	1 cut(s)	2250
Bsp19I	CCATGG	1 cut(s)	405
Bsp68I	TCGCGA	2 cut(s)	360, 528
BspANI	GGCC	8 cut(s)	158, 235, 285, 494, 923, 2276, 2645, 2793
BspCNI	CTCAG	4 cut(s)	232, 911, 1952, 2260
BspFNI	CGCG	8 cut(s)	25, 42, 138, 161, 288, 360, 528, 2907
BspHI	TCATGA	1 cut(s)	883
BspMI	ACCTGC	1 cut(s)	2942
BspQI	GCTCTTC	1 cut(s)	1212
BspT104I	TTCGAA	2 cut(s)	2011, 2715
BspT107I	GGYRCC	5 cut(s)	275, 323, 591, 811, 1889
BspTI	CTTAAG	1 cut(s)	2186
BspTNI	GGTCTC	2 cut(s)	1988, 2060
BsrDI	GCAATG	1 cut(s)	2245
BsrFI	RCCGGY	4 cut(s)	235, 278, 494, 2097
BsrGI	TGTACA	1 cut(s)	2250
BsrI	ACTGG	5 cut(s)	2008, 2072, 2688, 2731, 3085
BssAI	RCCGGY	4 cut(s)	235, 278, 494, 2097
BssECI	CCNNGG	7 cut(s)	159, 230, 405, 426, 458, 1894, 1895
BssNI	GRCGYC	2 cut(s)	60, 246
BssT1I	CCWWGG	2 cut(s)	405, 426
Bst2UI	CCWGG	7 cut(s)	351, 460, 596, 1514, 1896, 2745, 2961
Bst6I	CTCTTC	7 cut(s)	138, 578, 798, 846, 1212, 1581, 1614
BstACI	GRCGYC	2 cut(s)	60, 246
BstAFI	CTTAAG	1 cut(s)	2186
BstAUI	TGTACA	1 cut(s)	2250
BstBI	TTCGAA	2 cut(s)	2011, 2715
BstC8I	GCNNGC	9 cut(s)	32, 237, 496, 500, 1298, 1302, 1668, 2599, 2666
BstDEI	CTNAG	5 cut(s)	240, 898, 1939, 2268, 2802
BstDSI	CCRYGG	2 cut(s)	159, 405
BstENI	CCTNNNNNAGG	1 cut(s)	615
BstF5I	GGATG	8 cut(s)	664, 964, 1273, 1393, 1522, 2077, 2677, 3067
BstFNI	CGCG	8 cut(s)	25, 42, 138, 161, 288, 360, 528, 2907
BstH2I	RGCGCY	2 cut(s)	82, 2320
BstHHI	GCGC	3 cut(s)	81, 138, 2319
BstMAI	GTCTC	6 cut(s)	213, 486, 868, 1455, 1988, 2060
BstMCI	CGRYCG	2 cut(s)	159, 236
BstMWI	GCNNNNNNNGC	8 cut(s)	31, 36, 85, 126, 135, 294, 1935, 2594
BstNI	CCWGG	7 cut(s)	351, 460, 596, 1514, 1896, 2745, 2961
BstNSI	RCATGY	1 cut(s)	2539
BstPAI	GACNNNNGTC	1 cut(s)	1407
BstSCI	CCNGG	8 cut(s)	349, 458, 594, 1332, 1512, 1894, 2743, 2959
BstSFI	CTRYAG	4 cut(s)	643, 700, 1872, 2089
BstSLI	GKGCMC	2 cut(s)	1894, 2647
BstUI	CGCG	8 cut(s)	25, 42, 138, 161, 288, 360, 528, 2907
BstV1I	GCAGC	2 cut(s)	138, 2125
BstV2I	GAAGAC	2 cut(s)	63, 2765
BstX2I	RGATCY	9 cut(s)	779, 827, 1627, 2302, 2851, 2968, 2974, 3001, 3028
BstYI	RGATCY	9 cut(s)	779, 827, 1627, 2302, 2851, 2968, 2974, 3001, 3028
BstZI	CGGCCG	2 cut(s)	156, 233
BsuRI	GGCC	8 cut(s)	158, 235, 285, 494, 923, 2276, 2645, 2793
BtgI	CCRYGG	2 cut(s)	159, 405
BtgZI	GCGATG	1 cut(s)	1992
BtrI	CACGTC	1 cut(s)	1172
BtsCI	GGATG	8 cut(s)	664, 964, 1273, 1393, 1522, 2077, 2677, 3067
BtsI	GCAGTG	1 cut(s)	1189
BtsIMutI	CAGTG	3 cut(s)	1189, 2681, 3078
BtuMI	TCGCGA	2 cut(s)	360, 528
BveI	ACCTGC	1 cut(s)	2942
Cac8I	GCNNGC	9 cut(s)	32, 237, 496, 500, 1298, 1302, 1668, 2599, 2666
CaiI	CAGNNNCTG	1 cut(s)	2854
CciI	TCATGA	1 cut(s)	883
CciNI	GCGGCCGC	1 cut(s)	156
CfoI	GCGC	3 cut(s)	81, 138, 2319
Cfr10I	RCCGGY	4 cut(s)	235, 278, 494, 2097
Cfr13I	GGNCC	5 cut(s)	606, 1330, 2643, 2644, 2792
Cfr42I	CCGCGG	1 cut(s)	162
CseI	GACGC	3 cut(s)	14, 68, 2430
Csp6I	GTAC	7 cut(s)	402, 1724, 1911, 2036, 2086, 2251, 2620
CspAI	ACCGGT	1 cut(s)	2097
CspCI	CAANNNNNGTGG	2 cut(s)	2482, 2517
CviQI	GTAC	7 cut(s)	402, 1724, 1911, 2036, 2086, 2251, 2620
DdeI	CTNAG	5 cut(s)	240, 898, 1939, 2268, 2802
DraI	TTTAAA	2 cut(s)	2409, 2998
EaeI	YGGCCR	4 cut(s)	156, 233, 283, 2274
EagI	CGGCCG	2 cut(s)	156, 233
Eam1104I	CTCTTC	7 cut(s)	138, 578, 798, 846, 1212, 1581, 1614
EarI	CTCTTC	7 cut(s)	138, 578, 798, 846, 1212, 1581, 1614
EciI	GGCGGA	1 cut(s)	177
Ecl136II	GAGCTC	1 cut(s)	417
EclXI	CGGCCG	2 cut(s)	156, 233
Eco130I	CCWWGG	2 cut(s)	405, 426
Eco24I	GRGCYC	2 cut(s)	419, 2647
Eco31I	GGTCTC	2 cut(s)	1988, 2060
Eco32I	GATATC	4 cut(s)	172, 1984, 2689, 2935
Eco47I	GGWCC	2 cut(s)	606, 1330
Eco47III	AGCGCT	1 cut(s)	2318
Eco52I	CGGCCG	2 cut(s)	156, 233
Eco53kI	GAGCTC	1 cut(s)	417
Eco57I	CTGAAG	2 cut(s)	1878, 2585
Eco88I	CYCGRG	1 cut(s)	1458
EcoICRI	GAGCTC	1 cut(s)	417
EcoNI	CCTNNNNNAGG	1 cut(s)	615
EcoO109I	RGGNCCY	3 cut(s)	606, 2644, 2792
EcoRII	CCWGG	7 cut(s)	349, 458, 594, 1512, 1894, 2743, 2959
EcoRV	GATATC	4 cut(s)	172, 1984, 2689, 2935
EcoT14I	CCWWGG	2 cut(s)	405, 426
EcoT38I	GRGCYC	2 cut(s)	419, 2647
ErhI	CCWWGG	2 cut(s)	405, 426
Esp3I	CGTCTC	1 cut(s)	868
FaqI	GGGAC	8 cut(s)	399, 592, 1163, 1250, 1343, 1367, 1415, 1690
FauI	CCCGC	2 cut(s)	154, 1377
FauNDI	CATATG	1 cut(s)	2388
FbaI	TGATCA	4 cut(s)	763, 1534, 1612, 2674
FokI	GGATG	8 cut(s)	671, 971, 1280, 1400, 1529, 2084, 2664, 3054
FriOI	GRGCYC	2 cut(s)	419, 2647
FspBI	CTAG	5 cut(s)	513, 819, 1076, 1553, 1830
GlaI	GCGC	3 cut(s)	80, 137, 2318
GsaI	CCCAGC	1 cut(s)	1711
GsuI	CTGGAG	3 cut(s)	372, 1860, 2025
HaeII	RGCGCY	2 cut(s)	82, 2320
HaeIII	GGCC	8 cut(s)	158, 235, 285, 494, 923, 2276, 2645, 2793
HapII	CCGG	7 cut(s)	6, 236, 279, 495, 1333, 1369, 2098
HgaI	GACGC	3 cut(s)	14, 68, 2430
HhaI	GCGC	3 cut(s)	81, 138, 2319
Hin1I	GRCGYC	2 cut(s)	60, 246
Hin6I	GCGC	3 cut(s)	79, 136, 2317
HinP1I	GCGC	3 cut(s)	79, 136, 2317
HincII	GTYRAC	2 cut(s)	550, 3045
HindII	GTYRAC	2 cut(s)	550, 3045
HindIII	AAGCTT	1 cut(s)	2567
HpaII	CCGG	7 cut(s)	6, 236, 279, 495, 1333, 1369, 2098
Hpy166II	GTNNAC	4 cut(s)	550, 1048, 2204, 3045
Hpy8I	GTNNAC	4 cut(s)	550, 1048, 2204, 3045
Hpy99I	CGWCG	9 cut(s)	14, 30, 56, 59, 62, 251, 293, 296, 1724
HpyAV	CCTTC	8 cut(s)	248, 621, 938, 1056, 1098, 1206, 2075, 2812
HpyCH4IV	ACGT	7 cut(s)	246, 364, 877, 1171, 1722, 2559, 2770
HpyCH4V	TGCA	5 cut(s)	1603, 2078, 2177, 2386, 2480
HpyF10VI	GCNNNNNNNGC	8 cut(s)	31, 36, 85, 126, 135, 294, 1935, 2594
HpyF3I	CTNAG	5 cut(s)	240, 898, 1939, 2268, 2802
HpySE526I	ACGT	7 cut(s)	246, 364, 877, 1171, 1722, 2559, 2770
Hsp92I	GRCGYC	2 cut(s)	60, 246
HspAI	GCGC	3 cut(s)	79, 136, 2317
KflI	GGGWCCC	1 cut(s)	606
KroI	GCCGGC	2 cut(s)	235, 494
KroNI	GCCGGC	2 cut(s)	237, 496
Ksp22I	TGATCA	4 cut(s)	763, 1534, 1612, 2674
KspI	CCGCGG	1 cut(s)	162
LguI	GCTCTTC	1 cut(s)	1212
LmnI	GCTCC	4 cut(s)	184, 352, 744, 1281
Lsp1109I	GCAGC	2 cut(s)	138, 2125
LweI	GCATC	4 cut(s)	2020, 2065, 2497, 2799
MaeI	CTAG	5 cut(s)	513, 819, 1076, 1553, 1830
MaeII	ACGT	7 cut(s)	246, 364, 877, 1171, 1722, 2559, 2770
MflI	RGATCY	9 cut(s)	779, 827, 1627, 2302, 2851, 2968, 2974, 3001, 3028
MhlI	GDGCHC	3 cut(s)	419, 1894, 2647
MlsI	TGGCCA	1 cut(s)	2276
MluI	ACGCGT	1 cut(s)	2905
MluNI	TGGCCA	1 cut(s)	2276
MlyI	GAGTC	4 cut(s)	311, 338, 472, 1742
MmeI	TCCRAC	1 cut(s)	75
Mox20I	TGGCCA	1 cut(s)	2276
MroNI	GCCGGC	2 cut(s)	235, 494
MroXI	GAANNNNTTC	1 cut(s)	2655
MscI	TGGCCA	1 cut(s)	2276
MseI	TTAA	7 cut(s)	1632, 1641, 2187, 2223, 2408, 2901, 2997
MslI	CAYNNNNRTG	2 cut(s)	567, 765
Msp20I	TGGCCA	1 cut(s)	2276
MspA1I	CMGCKG	2 cut(s)	161, 2138
MspCI	CTTAAG	1 cut(s)	2186
MspI	CCGG	7 cut(s)	6, 236, 279, 495, 1333, 1369, 2098
MspR9I	CCNGG	8 cut(s)	351, 460, 596, 1334, 1514, 1896, 2745, 2961
MvaI	CCWGG	7 cut(s)	351, 460, 596, 1514, 1896, 2745, 2961
MvnI	CGCG	8 cut(s)	25, 42, 138, 161, 288, 360, 528, 2907
MwoI	GCNNNNNNNGC	8 cut(s)	31, 36, 85, 126, 135, 294, 1935, 2594
NaeI	GCCGGC	2 cut(s)	237, 496
NciI	CCSGG	1 cut(s)	1334
NcoI	CCATGG	1 cut(s)	405
NdeI	CATATG	1 cut(s)	2388
NgoMIV	GCCGGC	2 cut(s)	235, 494
NmeAIII	GCCGAG	5 cut(s)	88, 211, 352, 544, 934
NotI	GCGGCCGC	1 cut(s)	156
NruI	TCGCGA	2 cut(s)	360, 528
NspI	RCATGY	1 cut(s)	2539
NspV	TTCGAA	2 cut(s)	2011, 2715
PaeR7I	CTCGAG	1 cut(s)	1458
PagI	TCATGA	1 cut(s)	883
PasI	CCCWGGG	1 cut(s)	1895
PciSI	GCTCTTC	1 cut(s)	1212
PcsI	WCGNNNNNNNCGW	1 cut(s)	60
PdiI	GCCGGC	2 cut(s)	237, 496
PdmI	GAANNNNTTC	1 cut(s)	2655
PfeI	GAWTC	8 cut(s)	20, 533, 599, 2378, 2392, 2437, 2911, 3064
PflMI	CCANNNNNTGG	1 cut(s)	1901
PfoI	TCCNGGA	1 cut(s)	349
PinAI	ACCGGT	1 cut(s)	2097
PleI	GAGTC	4 cut(s)	311, 337, 471, 1741
PpsI	GAGTC	4 cut(s)	311, 337, 471, 1741
PpuMI	RGGWCCY	1 cut(s)	606
PshAI	GACNNNNGTC	1 cut(s)	1407
Psp124BI	GAGCTC	1 cut(s)	419
Psp1406I	AACGTT	2 cut(s)	364, 2559
Psp5II	RGGWCCY	1 cut(s)	606
Psp6I	CCWGG	7 cut(s)	349, 458, 594, 1512, 1894, 2743, 2959
PspFI	CCCAGC	1 cut(s)	1707
PspGI	CCWGG	7 cut(s)	349, 458, 594, 1512, 1894, 2743, 2959
PspOMI	GGGCCC	1 cut(s)	2643
PspPI	GGNCC	5 cut(s)	606, 1330, 2643, 2644, 2792
PspPPI	RGGWCCY	1 cut(s)	606
PstNI	CAGNNNCTG	1 cut(s)	2854
PsuI	RGATCY	9 cut(s)	779, 827, 1627, 2302, 2851, 2968, 2974, 3001, 3028
RruI	TCGCGA	2 cut(s)	360, 528
RsaI	GTAC	7 cut(s)	403, 1725, 1912, 2037, 2087, 2252, 2621
RsaNI	GTAC	7 cut(s)	402, 1724, 1911, 2036, 2086, 2251, 2620
RseI	CAYNNNNRTG	2 cut(s)	567, 765
SacI	GAGCTC	1 cut(s)	419
SacII	CCGCGG	1 cut(s)	162
SapI	GCTCTTC	1 cut(s)	1212
SaqAI	TTAA	7 cut(s)	1632, 1641, 2187, 2223, 2408, 2901, 2997
Sau96I	GGNCC	5 cut(s)	606, 1330, 2643, 2644, 2792
SchI	GAGTC	4 cut(s)	311, 338, 472, 1742
ScrFI	CCNGG	8 cut(s)	351, 460, 596, 1334, 1514, 1896, 2745, 2961
SduI	GDGCHC	3 cut(s)	419, 1894, 2647
SfaNI	GCATC	4 cut(s)	2020, 2065, 2497, 2799
SfcI	CTRYAG	4 cut(s)	643, 700, 1872, 2089
Sfr274I	CTCGAG	1 cut(s)	1458
Sfr303I	CCGCGG	1 cut(s)	162
SfuI	TTCGAA	2 cut(s)	2011, 2715
SgrBI	CCGCGG	1 cut(s)	162
SinI	GGWCC	2 cut(s)	606, 1330
SlaI	CTCGAG	1 cut(s)	1458
SmiMI	CAYNNNNRTG	2 cut(s)	567, 765
SmlI	CTYRAG	4 cut(s)	266, 554, 1458, 2186
SmoI	CTYRAG	4 cut(s)	266, 554, 1458, 2186
SspI	AATATT	1 cut(s)	2428
SspMI	CTAG	5 cut(s)	513, 819, 1076, 1553, 1830
SstI	GAGCTC	1 cut(s)	419
StyD4I	CCNGG	8 cut(s)	349, 458, 594, 1332, 1512, 1894, 2743, 2959
StyI	CCWWGG	2 cut(s)	405, 426
TaiI	ACGT	7 cut(s)	249, 367, 880, 1174, 1725, 2562, 2773
TaqII	GACCGA	1 cut(s)	1733
TatI	WGTACW	1 cut(s)	2250
TauI	GCSGC	8 cut(s)	42, 158, 161, 193, 196, 288, 592, 926
TfiI	GAWTC	8 cut(s)	20, 533, 599, 2378, 2392, 2437, 2911, 3064
Tru1I	TTAA	7 cut(s)	1632, 1641, 2187, 2223, 2408, 2901, 2997
Tru9I	TTAA	7 cut(s)	1632, 1641, 2187, 2223, 2408, 2901, 2997
TscAI	CASTG	3 cut(s)	1189, 2688, 3085
TseI	GCWGC	2 cut(s)	126, 2138
TspGWI	ACGGA	2 cut(s)	1217, 2048
TspRI	CASTG	3 cut(s)	1189, 2688, 3085
Van91I	CCANNNNNTGG	1 cut(s)	1901
Vha464I	CTTAAG	1 cut(s)	2186
VpaK11BI	GGWCC	2 cut(s)	606, 1330
XagI	CCTNNNNNAGG	1 cut(s)	615
XapI	RAATTY	4 cut(s)	261, 508, 574, 2839
XbaI	TCTAGA	1 cut(s)	818
XceI	RCATGY	1 cut(s)	2539
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2688
XhoI	CTCGAG	1 cut(s)	1458
XmnI	GAANNNNTTC	1 cut(s)	2655
XspI	CTAG	5 cut(s)	513, 819, 1076, 1553, 1830
ZraI	GACGTC	1 cut(s)	247

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.