Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002761

Physical Location & Seq

Genomic Coordinates Forward (+)

59016213 .. 59025244

Gene Structure 9032 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40391

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2925 bp

ATGTCCGGCGACGACCACGATTCGCGTCGCAAGCACCGCCGCGATCATTCCGACGACGACGCCGAGAAGTCCTCCAAGCGCCACAAGCACCGCCACCACCACCGCCACCACCGTCACCGCCACAGCAGCAAGAAGCGCGAAGAAGAGAGCAAGGCGGCCGCGGGTGAGGATATCGAAGCTCCTCCTCCGCCGCCTGTTATGTTGTCTCCTTCCAATAGTCCTCCTCCTCGGCCGGCCGAGGACGTCGAGGAAGGTGAAATTCTTGAGGACGGTGCCGGTGGTCGCGACGACGGCGTTTTGGAACCGAAAGCGGACTCTGGTGTCGAGTCTGGTGAAATTGAAGCTCCTGGAGTTCGCGAACGTTCTGATAAGCGAAATCTGGGACTTTATAGTGACAGTACCATGGATAAGAGCTCAAAGACCTTGGGCAAAGAACTTCATAGTGATGATGATCCCAGGAGTCCTATTGGGGGTAAGTCTCATAGTGAGGCCAGCTTGCCTCAAAATTCTAGTGCCGAGCCTCGCGAAGAATCAGTTTCCAGAGTTGACCTTGAGGATCATGCCAATGGGAATTTAGAGAAGAGGCGGCACCTGGAATCTGGGTTCCCTTCTAAAGGAGGTGGTCATCGAAAGAAATACTATAGTGAAAATGTGGATGATGATAGAAGCAAATTAGCTAATAAAGAAAAGTCACCCTATAGAAGTAGTGGTGACAGGTATGGTGAAGTGTTGCGTGGCAGGAGCAGATCAGGGTCACATGATCATGTGAGAGGGAGATCCCGTTCCCGTAGTATAGTTGAAGAGGAGGCACCATCTAGAAGAAGATCTCATTCTCGCAGTATGTTAGAAGAGGAAGCTCTTTCTAAAAGGAGACGTTATCATGATCGAGAAATCTCAGTATATGCCGAGAAAAGCAAGGCCGCACACAACTCTGATGATGAAGAAAGGAGTAGTGACAGGGATTTGTTTAGGGACAGGAAAAGGGGAATTGGACGTGGTGATAGCACTGAAAGGGTGGTTGATACGGAAAGTAGAAGGGAAGAGCGACATAGAAGCAGGGACAGAGAGAACAGGGACAGGACAAGGGAGGATGATGTTGATAGGAGCAGGGGCAGGGGCAGGGGCAAGCCTGCTGACAGAGAGAGAGATAGAGATATGGAGAGGGATCGGGATCGGGATAGGGATAGGGACAGAGTAACAGACCGGAAATGGGAGAGGCGGGATGATAGATATAGGGACAAGGGTCGAGATATGGAGAGGGAGAGAAATGAAACTGAAAGTGGATATGGAACTCGAGACAAGCATAATCATTCTGGTCAATCAAGGTATGAAGAAAAAGAATATAACCAGGATGGTTCAACAAAATCTGATCAAGCAGAAGTTCAGCTAGAAAGAGATGAAGATGAACAAGGAGATGATGAAGAGATGGTCAGTTTGCAAGTTGCTGATCAGGAAGAGGAAGATCTTAACAGAATTAAGGAGGAAAGTAGGAGGAGAAAGCAAGCAATCTTGGAAAAATATAAAAGTCAGCAGTCACAGTCCCAGCAAAAGACCGACGTACAAATTGAGTCACAGTTACAGCAACCCACTCAATTAGAGGGTCAAAAAGATCATCTGGATCAATCAACAGGGGTTGCCAAATCCAGAGCAGAAGTTGATGGTGCTAGGAGTTCTGGAGGAGTATATATGGCTGAAGCATTTTCTACTACAGCTCGTCAGAATGGTGCCCCAGGGCTAGGAGAGGGTACTCCAAAGAGTGAAAGCTCTGGTGGCTCAGAACCCAAAAAAGAAAGAGCTGATGGTATTTTATGCGATGATATCTTTGGTGAGACCCCAACTGGAGTTCGAAAATTGGACAAAGGAGATGCTGTACGAATTGAAAGGAGTGGTCTCCGTGACAACTGGGATGATGCAGAAGGGTACTACAGCTACCGGTTTGGGGAGTTACTTGATGGTCGATATGAGATTACCGCTGCTCATGGAAAAGGCGTGTTTTCAACTGTTGTTCGTGCAAAGAACCTTAAGGTTGGTAATGGTGAACCAGAAGAAGTGGCAATTAAGATTATTCGTAGCAATGATACTATGTACAAGGCTGGTATGACTGAGTTGGCCATATTGAAGAAATTAGTAGGTCAAGATCCAGACAATAAGCGCTATTGTGTTCGTTTTCTATCAAGTTTCAAGTATCGAAATCATCTTTGTTTAGTTTTTGAATCTCTGCATATGAATCTTCGTGAGCTTTTAAAGAAGTTTGGACGCAATATTGGTCTCAATCTAACTGCGGTGAGAGTATATGCTAAGCAACTCTTGATTGCATTGAAGCATCTCAAAAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAACATGCTGGTAAATGAAGCAAAAAACGTTCTGAAGCTTTGTGATTTTGGTAACGCCATGTTTGCTGGCAAGAATGAAGTTACACCATACCTTGTGAGCCGATTTTATCGGGCCCCTGAAATAATTCTTGGCTTGCCTTATGATCATCCGCTGGATATCTGGTCTGTTGGTTGCTGTTTGTTCGAACTTTATACTGGAAAAGTTCTTTTTCCTGGTGCTACGAACAATGATATGCTACGTCTTCACATGGAATTGAAAGGCCCTTTCCCTAAGAAGATGCTTCGGAAGGGAGCATTTACTTATCAAAATTTCGATCAGGATCTGAACTTCCATGCCACAGAAGATGATCCTGTTACAAAAAAGGTTATTAAACGCGTTATTCTCAACATAAAGCCAAAAGATATCGGATCAATGATCGCAGGTTCTTCTGGCGAGGATCCAGATCCCAAGATATTAGCTGATTTTAAAGATCTTTTAGATAAAATGTTTGTGCTGGATCCGGACAAGAGGTTGACAGTATCACAAGGTTTGAATCATCCATTCATCACTGGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016310 GO:0019538 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase TBPIP

Protein Analysis

974

Amino Acids

111.02

Weight (kDa)

6.86

Isoelectric Point (pI)

57.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	655 - 971	4.4e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	660 - 870	4.4e-19	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13350 AT1G13350 AT1G13350 AT3G25840 AT3G25840 AT3G53640
fragaria_vesca	FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640 FvH4_4g27640
malus_domestica	MD13G1043800.v1.1 MD16G1044600.v1.1
prunus_persica	Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1 Prupe.1G308700_v2.0.a1
pyrus_communis	pycom16g03900
rosa_chinensis	RchiOBHm_Chr4g0435481
rosa_laevigata	RLG00000006589
rosa_multiflora	Rmu_sc0001940.1_g000027
rosa_roxburghii	Rroxscaffold_5G00376710
rosa_rugosa	Rorug04G0285400 Rorug04G0285500
rosa_samantha	Rh4AG341100 Rh4BG349300 Rh4CG364000 Rh4DG343600
rosa_wichuraiana	Rw4G029760

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	320
AatII	GACGTC	1 cut(s)	246
Acc36I	ACCTGC	1 cut(s)	2777
AccB1I	GGYRCC	4 cut(s)	272, 588, 808, 1724
AccII	CGCG	8 cut(s)	25, 42, 138, 161, 285, 357, 525, 2742
AccIII	TCCGGA	1 cut(s)	2866
AclI	AACGTT	2 cut(s)	361, 2394
AcoI	YGGCCR	4 cut(s)	156, 230, 234, 2109
AcsI	RAATTY	4 cut(s)	258, 505, 571, 2674
AcuI	CTGAAG	2 cut(s)	1713, 2420
AcyI	GRCGYC	2 cut(s)	60, 243
AfaI	GTAC	6 cut(s)	400, 1560, 1747, 1872, 1922, 2087
AfeI	AGCGCT	1 cut(s)	2153
AfiI	CCNNNNNNNGG	5 cut(s)	470, 614, 1210, 1736, 1939
AflII	CTTAAG	1 cut(s)	2021
AflIII	ACRYGT	1 cut(s)	2740
AgeI	ACCGGT	1 cut(s)	1932
AjiI	CACGTC	1 cut(s)	995
AjnI	CCWGG	6 cut(s)	346, 455, 591, 1347, 1729, 2578
AjuI	GAANNNNNNNTTGG	2 cut(s)	2478, 2510
AloI	GAACNNNNNNTCC	4 cut(s)	587, 619, 766, 798
Alw21I	GWGCWC	1 cut(s)	416
Alw26I	GTCTC	7 cut(s)	210, 483, 865, 1290, 1823, 1895, 2273
AlwNI	CAGNNNCTG	1 cut(s)	2689
Ama87I	CYCGRG	1 cut(s)	1293
Aor13HI	TCCGGA	1 cut(s)	2866
Aor51HI	AGCGCT	1 cut(s)	2153
AoxI	GGCC	8 cut(s)	156, 230, 234, 489, 918, 2109, 2478, 2626
ApaI	GGGCCC	1 cut(s)	2482
ApeKI	GCWGC	2 cut(s)	126, 1973
ApoI	RAATTY	4 cut(s)	258, 505, 571, 2674
AsiGI	ACCGGT	1 cut(s)	1932
Asp700I	GAANNNNTTC	1 cut(s)	2490
AspLEI	GCGC	3 cut(s)	81, 138, 2154
AspS9I	GGNCC	3 cut(s)	2478, 2479, 2627
AsuII	TTCGAA	2 cut(s)	1846, 2550
AvaI	CYCGRG	1 cut(s)	1293
BaeGI	GKGCMC	2 cut(s)	1729, 2482
BalI	TGGCCA	1 cut(s)	2111
BamHI	GGATCC	2 cut(s)	2803, 2863
BanI	GGYRCC	4 cut(s)	272, 588, 808, 1724
BanII	GRGCYC	2 cut(s)	416, 2482
BbsI	GAAGAC	1 cut(s)	2600
Bbv12I	GWGCWC	1 cut(s)	416
BbvI	GCAGC	2 cut(s)	138, 1960
BccI	CCATC	6 cut(s)	820, 1346, 1420, 1652, 1793, 1946
BceAI	ACGGC	1 cut(s)	307
BciT130I	CCWGG	6 cut(s)	348, 457, 593, 1349, 1731, 2580
BclI	TGATCA	4 cut(s)	760, 1369, 1447, 2509
BcoDI	GTCTC	7 cut(s)	210, 483, 865, 1290, 1823, 1895, 2273
BfaI	CTAG	5 cut(s)	510, 816, 1388, 1665, 1736
BfmI	CTRYAG	4 cut(s)	640, 697, 1707, 1924
BfoI	RGCGCY	2 cut(s)	82, 2155
BfrI	CTTAAG	1 cut(s)	2021
BfuAI	ACCTGC	1 cut(s)	2777
BglII	AGATCT	3 cut(s)	824, 1462, 2836
BisI	GCNGC	8 cut(s)	40, 127, 156, 159, 191, 587, 921, 1974
BlpI	GCTNAGC	1 cut(s)	2298
BlsI	GCNGC	8 cut(s)	41, 128, 157, 160, 192, 588, 922, 1975
Bme1390I	CCNGG	6 cut(s)	348, 457, 593, 1349, 1731, 2580
BmeT110I	CYCGRG	1 cut(s)	1293
BmgBI	CACGTC	1 cut(s)	995
BmgT120I	GGNCC	3 cut(s)	2478, 2479, 2627
BmrFI	CCNGG	6 cut(s)	348, 457, 593, 1349, 1731, 2580
BmrI	ACTGGG	1 cut(s)	1912
BmsI	GCATC	4 cut(s)	1855, 1900, 2332, 2634
BmuI	ACTGGG	1 cut(s)	1912
BoxI	GACNNNNGTC	1 cut(s)	1242
BpiI	GAAGAC	1 cut(s)	2600
BplI	GAGNNNNNCTC	2 cut(s)	56, 88
BpmI	CTGGAG	3 cut(s)	369, 1695, 1860
Bpu1102I	GCTNAGC	1 cut(s)	2298
Bpu14I	TTCGAA	2 cut(s)	1846, 2550
BpuEI	CTTGAG	2 cut(s)	284, 572
BsaBI	GATNNNNATC	4 cut(s)	450, 1170, 2685, 2808
BsaHI	GRCGYC	2 cut(s)	60, 243
BsaI	GGTCTC	3 cut(s)	1823, 1895, 2273
BsaJI	CCNNGG	8 cut(s)	159, 227, 237, 402, 423, 455, 1729, 1730
BsaWI	WCCGGW	3 cut(s)	1203, 1932, 2866
BsaXI	ACNNNNNCTCC	4 cut(s)	766, 796, 1854, 1884
Bsc4I	CCNNNNNNNGG	5 cut(s)	470, 614, 1210, 1736, 1939
Bse118I	RCCGGY	3 cut(s)	232, 275, 1932
Bse1I	ACTGG	4 cut(s)	1843, 1907, 2566, 2920
Bse3DI	GCAATG	1 cut(s)	2080
Bse8I	GATNNNNATC	4 cut(s)	450, 1170, 2685, 2808
BseAI	TCCGGA	1 cut(s)	2866
BseBI	CCWGG	6 cut(s)	348, 457, 593, 1349, 1731, 2580
BseDI	CCNNGG	8 cut(s)	159, 227, 237, 402, 423, 455, 1729, 1730
BseGI	GGATG	7 cut(s)	661, 1096, 1228, 1357, 1912, 2512, 2902
BseJI	GATNNNNATC	4 cut(s)	450, 1170, 2685, 2808
BseLI	CCNNNNNNNGG	5 cut(s)	470, 614, 1210, 1736, 1939
BseMI	GCAATG	1 cut(s)	2080
BseMII	CTCAG	3 cut(s)	909, 1788, 2094
BseNI	ACTGG	4 cut(s)	1843, 1907, 2566, 2920
BseRI	GAGGAG	7 cut(s)	171, 174, 213, 216, 818, 1507, 1692
BseSI	GKGCMC	2 cut(s)	1729, 2482
BseX3I	CGGCCG	3 cut(s)	156, 230, 234
BseXI	GCAGC	2 cut(s)	138, 1960
BseYI	CCCAGC	1 cut(s)	1542
Bsh1236I	CGCG	8 cut(s)	25, 42, 138, 161, 285, 357, 525, 2742
Bsh1285I	CGRYCG	3 cut(s)	159, 233, 237
BshFI	GGCC	8 cut(s)	158, 232, 236, 491, 920, 2111, 2480, 2628
BshNI	GGYRCC	4 cut(s)	272, 588, 808, 1724
BshTI	ACCGGT	1 cut(s)	1932
BsiEI	CGRYCG	3 cut(s)	159, 233, 237
BsiHKAI	GWGCWC	1 cut(s)	416
BsiHKCI	CYCGRG	1 cut(s)	1293
BsiSI	CCGG	6 cut(s)	6, 233, 276, 1204, 1933, 2867
BslFI	GGGAC	7 cut(s)	396, 986, 1073, 1088, 1202, 1250, 1525
BslI	CCNNNNNNNGG	5 cut(s)	470, 614, 1210, 1736, 1939
BsmAI	GTCTC	7 cut(s)	210, 483, 865, 1290, 1823, 1895, 2273
BsmBI	CGTCTC	1 cut(s)	865
BsmFI	GGGAC	7 cut(s)	396, 986, 1073, 1088, 1202, 1250, 1525
BsnI	GGCC	8 cut(s)	158, 232, 236, 491, 920, 2111, 2480, 2628
Bso31I	GGTCTC	3 cut(s)	1823, 1895, 2273
BsoBI	CYCGRG	1 cut(s)	1293
Bsp119I	TTCGAA	2 cut(s)	1846, 2550
Bsp120I	GGGCCC	1 cut(s)	2478
Bsp1286I	GDGCHC	3 cut(s)	416, 1729, 2482
Bsp13I	TCCGGA	1 cut(s)	2866
Bsp1407I	TGTACA	1 cut(s)	2085
Bsp1720I	GCTNAGC	1 cut(s)	2298
Bsp19I	CCATGG	1 cut(s)	402
Bsp68I	TCGCGA	3 cut(s)	285, 357, 525
BspANI	GGCC	8 cut(s)	158, 232, 236, 491, 920, 2111, 2480, 2628
BspCNI	CTCAG	3 cut(s)	908, 1787, 2095
BspEI	TCCGGA	1 cut(s)	2866
BspFNI	CGCG	8 cut(s)	25, 42, 138, 161, 285, 357, 525, 2742
BspHI	TCATGA	1 cut(s)	880
BspMI	ACCTGC	1 cut(s)	2777
BspQI	GCTCTTC	1 cut(s)	1035
BspT104I	TTCGAA	2 cut(s)	1846, 2550
BspT107I	GGYRCC	4 cut(s)	272, 588, 808, 1724
BspTI	CTTAAG	1 cut(s)	2021
BspTNI	GGTCTC	3 cut(s)	1823, 1895, 2273
BsrDI	GCAATG	1 cut(s)	2080
BsrFI	RCCGGY	3 cut(s)	232, 275, 1932
BsrGI	TGTACA	1 cut(s)	2085
BsrI	ACTGG	4 cut(s)	1843, 1907, 2566, 2920
BssAI	RCCGGY	3 cut(s)	232, 275, 1932
BssECI	CCNNGG	8 cut(s)	159, 227, 237, 402, 423, 455, 1729, 1730
BssNI	GRCGYC	2 cut(s)	60, 243
BssT1I	CCWWGG	2 cut(s)	402, 423
Bst2UI	CCWGG	6 cut(s)	348, 457, 593, 1349, 1731, 2580
Bst4CI	ACNGT	8 cut(s)	113, 272, 398, 1539, 1575, 2002, 2336, 2884
Bst6I	CTCTTC	7 cut(s)	138, 575, 795, 843, 1035, 1416, 1449
BstACI	GRCGYC	2 cut(s)	60, 243
BstAFI	CTTAAG	1 cut(s)	2021
BstAUI	TGTACA	1 cut(s)	2085
BstBI	TTCGAA	2 cut(s)	1846, 2550
BstC8I	GCNNGC	9 cut(s)	32, 234, 493, 497, 1127, 1131, 1503, 2434, 2501
BstDEI	CTNAG	5 cut(s)	895, 1774, 2103, 2298, 2637
BstDSI	CCRYGG	2 cut(s)	159, 402
BstENI	CCTNNNNNAGG	1 cut(s)	612
BstF5I	GGATG	7 cut(s)	661, 1096, 1228, 1357, 1912, 2512, 2902
BstFNI	CGCG	8 cut(s)	25, 42, 138, 161, 285, 357, 525, 2742
BstH2I	RGCGCY	2 cut(s)	82, 2155
BstHHI	GCGC	3 cut(s)	81, 138, 2154
BstMAI	GTCTC	7 cut(s)	210, 483, 865, 1290, 1823, 1895, 2273
BstMCI	CGRYCG	3 cut(s)	159, 233, 237
BstMWI	GCNNNNNNNGC	8 cut(s)	31, 36, 85, 126, 135, 291, 1770, 2429
BstNI	CCWGG	6 cut(s)	348, 457, 593, 1349, 1731, 2580
BstNSI	RCATGY	1 cut(s)	2374
BstPAI	GACNNNNGTC	1 cut(s)	1242
BstSCI	CCNGG	6 cut(s)	346, 455, 591, 1347, 1729, 2578
BstSFI	CTRYAG	4 cut(s)	640, 697, 1707, 1924
BstSLI	GKGCMC	2 cut(s)	1729, 2482
BstUI	CGCG	8 cut(s)	25, 42, 138, 161, 285, 357, 525, 2742
BstV1I	GCAGC	2 cut(s)	138, 1960
BstV2I	GAAGAC	1 cut(s)	2600
BstX2I	RGATCY	9 cut(s)	776, 824, 1462, 2137, 2686, 2803, 2809, 2836, 2863
BstYI	RGATCY	9 cut(s)	776, 824, 1462, 2137, 2686, 2803, 2809, 2836, 2863
BstZI	CGGCCG	3 cut(s)	156, 230, 234
BsuRI	GGCC	8 cut(s)	158, 232, 236, 491, 920, 2111, 2480, 2628
BtgI	CCRYGG	2 cut(s)	159, 402
BtgZI	GCGATG	1 cut(s)	1827
BtrI	CACGTC	1 cut(s)	995
BtsCI	GGATG	7 cut(s)	661, 1096, 1228, 1357, 1912, 2512, 2902
BtsIMutI	CAGTG	2 cut(s)	1005, 2913
BtuMI	TCGCGA	3 cut(s)	285, 357, 525
BveI	ACCTGC	1 cut(s)	2777
Cac8I	GCNNGC	9 cut(s)	32, 234, 493, 497, 1127, 1131, 1503, 2434, 2501
CaiI	CAGNNNCTG	1 cut(s)	2689
CciI	TCATGA	1 cut(s)	880
CciNI	GCGGCCGC	1 cut(s)	156
CfoI	GCGC	3 cut(s)	81, 138, 2154
Cfr10I	RCCGGY	3 cut(s)	232, 275, 1932
Cfr13I	GGNCC	3 cut(s)	2478, 2479, 2627
Cfr42I	CCGCGG	1 cut(s)	162
CseI	GACGC	3 cut(s)	14, 68, 2265
Csp6I	GTAC	6 cut(s)	399, 1559, 1746, 1871, 1921, 2086
CspAI	ACCGGT	1 cut(s)	1932
CspCI	CAANNNNNGTGG	2 cut(s)	2317, 2352
CviQI	GTAC	6 cut(s)	399, 1559, 1746, 1871, 1921, 2086
DdeI	CTNAG	5 cut(s)	895, 1774, 2103, 2298, 2637
DraI	TTTAAA	2 cut(s)	2244, 2833
DrdI	GACNNNNNNGTC	1 cut(s)	320
DseDI	GACNNNNNNGTC	1 cut(s)	320
EaeI	YGGCCR	4 cut(s)	156, 230, 234, 2109
EagI	CGGCCG	3 cut(s)	156, 230, 234
Eam1104I	CTCTTC	7 cut(s)	138, 575, 795, 843, 1035, 1416, 1449
EarI	CTCTTC	7 cut(s)	138, 575, 795, 843, 1035, 1416, 1449
EciI	GGCGGA	1 cut(s)	177
Ecl136II	GAGCTC	1 cut(s)	414
EclXI	CGGCCG	3 cut(s)	156, 230, 234
Eco130I	CCWWGG	2 cut(s)	402, 423
Eco24I	GRGCYC	2 cut(s)	416, 2482
Eco31I	GGTCTC	3 cut(s)	1823, 1895, 2273
Eco32I	GATATC	4 cut(s)	172, 1819, 2524, 2770
Eco47III	AGCGCT	1 cut(s)	2153
Eco52I	CGGCCG	3 cut(s)	156, 230, 234
Eco53kI	GAGCTC	1 cut(s)	414
Eco57I	CTGAAG	2 cut(s)	1713, 2420
Eco88I	CYCGRG	1 cut(s)	1293
EcoICRI	GAGCTC	1 cut(s)	414
EcoNI	CCTNNNNNAGG	1 cut(s)	612
EcoO109I	RGGNCCY	2 cut(s)	2479, 2627
EcoRII	CCWGG	6 cut(s)	346, 455, 591, 1347, 1729, 2578
EcoRV	GATATC	4 cut(s)	172, 1819, 2524, 2770
EcoT14I	CCWWGG	2 cut(s)	402, 423
EcoT38I	GRGCYC	2 cut(s)	416, 2482
ErhI	CCWWGG	2 cut(s)	402, 423
Esp3I	CGTCTC	1 cut(s)	865
FalI	AAGNNNNNCTT	2 cut(s)	2291, 2323
FaqI	GGGAC	7 cut(s)	396, 986, 1073, 1088, 1202, 1250, 1525
FauI	CCCGC	2 cut(s)	154, 1212
FauNDI	CATATG	1 cut(s)	2223
FbaI	TGATCA	4 cut(s)	760, 1369, 1447, 2509
Fnu4HI	GCNGC	8 cut(s)	40, 127, 156, 159, 191, 587, 921, 1974
FokI	GGATG	7 cut(s)	668, 1103, 1235, 1364, 1919, 2499, 2889
FriOI	GRGCYC	2 cut(s)	416, 2482
FseI	GGCCGGCC	1 cut(s)	236
Fsp4HI	GCNGC	8 cut(s)	40, 127, 156, 159, 191, 587, 921, 1974
FspBI	CTAG	5 cut(s)	510, 816, 1388, 1665, 1736
GlaI	GCGC	3 cut(s)	80, 137, 2153
GluI	GCNGC	8 cut(s)	40, 127, 156, 159, 191, 587, 921, 1974
GsaI	CCCAGC	1 cut(s)	1546
GsuI	CTGGAG	3 cut(s)	369, 1695, 1860
HaeII	RGCGCY	2 cut(s)	82, 2155
HaeIII	GGCC	8 cut(s)	158, 232, 236, 491, 920, 2111, 2480, 2628
HapII	CCGG	6 cut(s)	6, 233, 276, 1204, 1933, 2867
HgaI	GACGC	3 cut(s)	14, 68, 2265
HhaI	GCGC	3 cut(s)	81, 138, 2154
Hin1I	GRCGYC	2 cut(s)	60, 243
Hin6I	GCGC	3 cut(s)	79, 136, 2152
HinP1I	GCGC	3 cut(s)	79, 136, 2152
HincII	GTYRAC	2 cut(s)	547, 2880
HindII	GTYRAC	2 cut(s)	547, 2880
HindIII	AAGCTT	1 cut(s)	2402
HpaII	CCGG	6 cut(s)	6, 233, 276, 1204, 1933, 2867
Hpy166II	GTNNAC	3 cut(s)	547, 2039, 2880
Hpy8I	GTNNAC	3 cut(s)	547, 2039, 2880
Hpy99I	CGWCG	9 cut(s)	14, 30, 56, 59, 62, 248, 290, 293, 1559
HpyAV	CCTTC	6 cut(s)	219, 245, 618, 1029, 1910, 2647
HpyCH4III	ACNGT	8 cut(s)	113, 272, 398, 1539, 1575, 2002, 2336, 2884
HpyCH4IV	ACGT	7 cut(s)	243, 361, 874, 994, 1557, 2394, 2605
HpyCH4V	TGCA	5 cut(s)	1438, 1913, 2012, 2221, 2315
HpyF10VI	GCNNNNNNNGC	8 cut(s)	31, 36, 85, 126, 135, 291, 1770, 2429
HpyF3I	CTNAG	5 cut(s)	895, 1774, 2103, 2298, 2637
HpySE526I	ACGT	7 cut(s)	243, 361, 874, 994, 1557, 2394, 2605
Hsp92I	GRCGYC	2 cut(s)	60, 243
HspAI	GCGC	3 cut(s)	79, 136, 2152
Kpn2I	TCCGGA	1 cut(s)	2866
KroI	GCCGGC	1 cut(s)	232
KroNI	GCCGGC	1 cut(s)	234
Ksp22I	TGATCA	4 cut(s)	760, 1369, 1447, 2509
KspI	CCGCGG	1 cut(s)	162
LguI	GCTCTTC	1 cut(s)	1035
LmnI	GCTCC	5 cut(s)	184, 349, 741, 1104, 2657
Lsp1109I	GCAGC	2 cut(s)	138, 1960
LweI	GCATC	4 cut(s)	1855, 1900, 2332, 2634
MaeI	CTAG	5 cut(s)	510, 816, 1388, 1665, 1736
MaeII	ACGT	7 cut(s)	243, 361, 874, 994, 1557, 2394, 2605
MflI	RGATCY	9 cut(s)	776, 824, 1462, 2137, 2686, 2803, 2809, 2836, 2863
MhlI	GDGCHC	3 cut(s)	416, 1729, 2482
MlsI	TGGCCA	1 cut(s)	2111
MluI	ACGCGT	1 cut(s)	2740
MluNI	TGGCCA	1 cut(s)	2111
MlyI	GAGTC	4 cut(s)	308, 335, 469, 1577
MmeI	TCCRAC	1 cut(s)	75
Mox20I	TGGCCA	1 cut(s)	2111
MroI	TCCGGA	1 cut(s)	2866
MroNI	GCCGGC	1 cut(s)	232
MroXI	GAANNNNTTC	1 cut(s)	2490
MscI	TGGCCA	1 cut(s)	2111
MseI	TTAA	7 cut(s)	1467, 1476, 2022, 2058, 2243, 2736, 2832
MslI	CAYNNNNRTG	3 cut(s)	444, 564, 762
Msp20I	TGGCCA	1 cut(s)	2111
MspA1I	CMGCKG	3 cut(s)	161, 1973, 2518
MspCI	CTTAAG	1 cut(s)	2021
MspI	CCGG	6 cut(s)	6, 233, 276, 1204, 1933, 2867
MspR9I	CCNGG	6 cut(s)	348, 457, 593, 1349, 1731, 2580
MvaI	CCWGG	6 cut(s)	348, 457, 593, 1349, 1731, 2580
MvnI	CGCG	8 cut(s)	25, 42, 138, 161, 285, 357, 525, 2742
MwoI	GCNNNNNNNGC	8 cut(s)	31, 36, 85, 126, 135, 291, 1770, 2429
NaeI	GCCGGC	1 cut(s)	234
NcoI	CCATGG	1 cut(s)	402
NdeI	CATATG	1 cut(s)	2223
NgoMIV	GCCGGC	1 cut(s)	232
NmeAIII	GCCGAG	5 cut(s)	88, 208, 262, 541, 931
NmuCI	GTSAC	9 cut(s)	113, 392, 690, 710, 753, 953, 1533, 1569, 1895
NotI	GCGGCCGC	1 cut(s)	156
NruI	TCGCGA	3 cut(s)	285, 357, 525
NspI	RCATGY	1 cut(s)	2374
NspV	TTCGAA	2 cut(s)	1846, 2550
PaeR7I	CTCGAG	1 cut(s)	1293
PagI	TCATGA	1 cut(s)	880
PasI	CCCWGGG	1 cut(s)	1730
PciSI	GCTCTTC	1 cut(s)	1035
PcsI	WCGNNNNNNNCGW	1 cut(s)	60
PdiI	GCCGGC	1 cut(s)	234
PdmI	GAANNNNTTC	1 cut(s)	2490
PfeI	GAWTC	6 cut(s)	20, 530, 596, 2213, 2227, 2899
PfoI	TCCNGGA	1 cut(s)	346
PinAI	ACCGGT	1 cut(s)	1932
PkrI	GCNGC	8 cut(s)	41, 128, 157, 160, 192, 588, 922, 1975
PleI	GAGTC	4 cut(s)	308, 334, 468, 1576
PpsI	GAGTC	4 cut(s)	308, 334, 468, 1576
PshAI	GACNNNNGTC	1 cut(s)	1242
Psp124BI	GAGCTC	1 cut(s)	416
Psp1406I	AACGTT	2 cut(s)	361, 2394
Psp6I	CCWGG	6 cut(s)	346, 455, 591, 1347, 1729, 2578
PspFI	CCCAGC	1 cut(s)	1542
PspGI	CCWGG	6 cut(s)	346, 455, 591, 1347, 1729, 2578
PspOMI	GGGCCC	1 cut(s)	2478
PspPI	GGNCC	3 cut(s)	2478, 2479, 2627
PstNI	CAGNNNCTG	1 cut(s)	2689
PsuI	RGATCY	9 cut(s)	776, 824, 1462, 2137, 2686, 2803, 2809, 2836, 2863
RigI	GGCCGGCC	1 cut(s)	236
RruI	TCGCGA	3 cut(s)	285, 357, 525
RsaI	GTAC	6 cut(s)	400, 1560, 1747, 1872, 1922, 2087
RsaNI	GTAC	6 cut(s)	399, 1559, 1746, 1871, 1921, 2086
RseI	CAYNNNNRTG	3 cut(s)	444, 564, 762
SacI	GAGCTC	1 cut(s)	416
SacII	CCGCGG	1 cut(s)	162
SapI	GCTCTTC	1 cut(s)	1035
SaqAI	TTAA	7 cut(s)	1467, 1476, 2022, 2058, 2243, 2736, 2832
SatI	GCNGC	8 cut(s)	40, 127, 156, 159, 191, 587, 921, 1974
Sau96I	GGNCC	3 cut(s)	2478, 2479, 2627
SchI	GAGTC	4 cut(s)	308, 335, 469, 1577
ScrFI	CCNGG	6 cut(s)	348, 457, 593, 1349, 1731, 2580
SduI	GDGCHC	3 cut(s)	416, 1729, 2482
SfaNI	GCATC	4 cut(s)	1855, 1900, 2332, 2634
SfcI	CTRYAG	4 cut(s)	640, 697, 1707, 1924
Sfr274I	CTCGAG	1 cut(s)	1293
Sfr303I	CCGCGG	1 cut(s)	162
SfuI	TTCGAA	2 cut(s)	1846, 2550
SgrBI	CCGCGG	1 cut(s)	162
SlaI	CTCGAG	1 cut(s)	1293
SmiMI	CAYNNNNRTG	3 cut(s)	444, 564, 762
SmlI	CTYRAG	4 cut(s)	263, 551, 1293, 2021
SmoI	CTYRAG	4 cut(s)	263, 551, 1293, 2021
SspI	AATATT	1 cut(s)	2263
SspMI	CTAG	5 cut(s)	510, 816, 1388, 1665, 1736
SstI	GAGCTC	1 cut(s)	416
StyD4I	CCNGG	6 cut(s)	346, 455, 591, 1347, 1729, 2578
StyI	CCWWGG	2 cut(s)	402, 423
TaaI	ACNGT	8 cut(s)	113, 272, 398, 1539, 1575, 2002, 2336, 2884
TaiI	ACGT	7 cut(s)	246, 364, 877, 997, 1560, 2397, 2608
TaqII	GACCGA	1 cut(s)	1568
TatI	WGTACW	1 cut(s)	2085
TauI	GCSGC	6 cut(s)	42, 158, 161, 193, 589, 923
TfiI	GAWTC	6 cut(s)	20, 530, 596, 2213, 2227, 2899
Tru1I	TTAA	7 cut(s)	1467, 1476, 2022, 2058, 2243, 2736, 2832
Tru9I	TTAA	7 cut(s)	1467, 1476, 2022, 2058, 2243, 2736, 2832
TscAI	CASTG	2 cut(s)	1012, 2920
TseFI	GTSAC	9 cut(s)	113, 392, 690, 710, 753, 953, 1533, 1569, 1895
TseI	GCWGC	2 cut(s)	126, 1973
Tsp45I	GTSAC	9 cut(s)	113, 392, 690, 710, 753, 953, 1533, 1569, 1895
TspGWI	ACGGA	2 cut(s)	1040, 1883
TspRI	CASTG	2 cut(s)	1012, 2920
Vha464I	CTTAAG	1 cut(s)	2021
XagI	CCTNNNNNAGG	1 cut(s)	612
XapI	RAATTY	4 cut(s)	258, 505, 571, 2674
XbaI	TCTAGA	1 cut(s)	815
XceI	RCATGY	1 cut(s)	2374
XhoI	CTCGAG	1 cut(s)	1293
XmnI	GAANNNNTTC	1 cut(s)	2490
XspI	CTAG	5 cut(s)	510, 816, 1388, 1665, 1736
ZraI	GACGTC	1 cut(s)	244

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.