Pectate lyase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14420 AT2G02720 |
| fragaria_vesca | FvH4_4g31900 |
| malus_domestica | MD13G1078400.v1.1 MD16G1078000.v1.1 MD16G1078100.v1.1 |
| prunus_persica | Prupe.1G268500_v2.0.a1 Prupe.1G268700_v2.0.a1 |
| pyrus_communis | pycom13g06810 pycom16g06740 pycom16g06760 |
| rosa_chinensis | RchiOBHm_Chr4g0440551 |
| rosa_rugosa | Rorug04G0326600 |
| rosa_samantha | Rh4AG378300 Rh4BG391000 Rh4CG405700 Rh4DG384700 |
| rosa_wichuraiana | Rw4G032390 Rw4G032490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 312 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 789 |
| AccBSI | CCGCTC | 1 cut(s) | 1279 |
| AccII | CGCG | 1 cut(s) | 446 |
| AccIII | TCCGGA | 2 cut(s) | 1238, 1323 |
| AciI | CCGC | 4 cut(s) | 27, 294, 512, 1277 |
| AclI | AACGTT | 2 cut(s) | 482, 635 |
| AclWI | GGATC | 3 cut(s) | 155, 527, 800 |
| AcoI | YGGCCR | 1 cut(s) | 394 |
| AcvI | CACGTG | 1 cut(s) | 928 |
| AfaI | GTAC | 2 cut(s) | 1157, 1350 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 476, 698, 789, 895, 1310 |
| AflIII | ACRYGT | 3 cut(s) | 444, 925, 1021 |
| AgsI | TTSAA | 2 cut(s) | 19, 139 |
| AjnI | CCWGG | 2 cut(s) | 475, 691 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 863, 895 |
| AluBI | AGCT | 9 cut(s) | 11, 62, 108, 253, 308, 602, 1223, 1260, 1373 |
| AluI | AGCT | 9 cut(s) | 11, 62, 108, 253, 308, 602, 1223, 1260, 1373 |
| Alw21I | GWGCWC | 2 cut(s) | 387, 1262 |
| Alw26I | GTCTC | 3 cut(s) | 498, 708, 808 |
| AlwI | GGATC | 3 cut(s) | 155, 527, 800 |
| Ama87I | CYCGRG | 1 cut(s) | 501 |
| Aor13HI | TCCGGA | 2 cut(s) | 1238, 1323 |
| AoxI | GGCC | 2 cut(s) | 69, 394 |
| ApeKI | GCWGC | 4 cut(s) | 5, 8, 291, 1356 |
| AspS9I | GGNCC | 4 cut(s) | 70, 422, 509, 1321 |
| AsuC2I | CCSGG | 1 cut(s) | 1311 |
| AsuHPI | GGTGA | 8 cut(s) | 172, 274, 767, 874, 910, 1039, 1181, 1379 |
| AvaI | CYCGRG | 1 cut(s) | 501 |
| AvaII | GGWCC | 3 cut(s) | 422, 509, 1321 |
| BanII | GRGCYC | 1 cut(s) | 1262 |
| BbrPI | CACGTG | 1 cut(s) | 928 |
| Bbv12I | GWGCWC | 2 cut(s) | 387, 1262 |
| BbvI | GCAGC | 4 cut(s) | 17, 20, 303, 1343 |
| BccI | CCATC | 6 cut(s) | 155, 584, 746, 752, 818, 1312 |
| BceAI | ACGGC | 1 cut(s) | 862 |
| BciT130I | CCWGG | 2 cut(s) | 477, 693 |
| BclI | TGATCA | 3 cut(s) | 540, 657, 708 |
| BcnI | CCSGG | 1 cut(s) | 1311 |
| BcoDI | GTCTC | 3 cut(s) | 498, 708, 808 |
| BfaI | CTAG | 3 cut(s) | 305, 371, 603 |
| BfmI | CTRYAG | 1 cut(s) | 63 |
| BisI | GCNGC | 5 cut(s) | 6, 9, 28, 292, 1357 |
| BlsI | GCNGC | 5 cut(s) | 7, 10, 29, 293, 1358 |
| BmcAI | AGTACT | 1 cut(s) | 1350 |
| Bme1390I | CCNGG | 3 cut(s) | 477, 693, 1311 |
| Bme18I | GGWCC | 3 cut(s) | 422, 509, 1321 |
| BmeT110I | CYCGRG | 1 cut(s) | 501 |
| BmgT120I | GGNCC | 4 cut(s) | 70, 422, 509, 1321 |
| BmiI | GGNNCC | 2 cut(s) | 72, 850 |
| BmrFI | CCNGG | 3 cut(s) | 477, 693, 1311 |
| BmrI | ACTGGG | 1 cut(s) | 358 |
| BmsI | GCATC | 6 cut(s) | 121, 208, 230, 326, 826, 1330 |
| BmuI | ACTGGG | 1 cut(s) | 358 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 982, 1014 |
| Bpu10I | CCTNAGC | 1 cut(s) | 737 |
| BpuMI | CCSGG | 1 cut(s) | 1311 |
| Bsa29I | ATCGAT | 2 cut(s) | 588, 834 |
| BsaAI | YACGTR | 1 cut(s) | 928 |
| BsaBI | GATNNNNATC | 1 cut(s) | 165 |
| BsaJI | CCNNGG | 2 cut(s) | 692, 1335 |
| BsaWI | WCCGGW | 4 cut(s) | 360, 407, 1238, 1323 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 591, 621 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 476, 698, 789, 895, 1310 |
| Bse1I | ACTGG | 2 cut(s) | 116, 353 |
| Bse3DI | GCAATG | 2 cut(s) | 94, 1110 |
| Bse8I | GATNNNNATC | 1 cut(s) | 165 |
| BseAI | TCCGGA | 2 cut(s) | 1238, 1323 |
| BseBI | CCWGG | 2 cut(s) | 477, 693 |
| BseCI | ATCGAT | 2 cut(s) | 588, 834 |
| BseDI | CCNNGG | 2 cut(s) | 692, 1335 |
| BseGI | GGATG | 3 cut(s) | 166, 223, 1345 |
| BseJI | GATNNNNATC | 1 cut(s) | 165 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 476, 698, 789, 895, 1310 |
| BseMI | GCAATG | 2 cut(s) | 94, 1110 |
| BseMII | CTCAG | 2 cut(s) | 272, 711 |
| BseNI | ACTGG | 2 cut(s) | 116, 353 |
| BseRI | GAGGAG | 2 cut(s) | 612, 1107 |
| BseX3I | CGGCCG | 1 cut(s) | 394 |
| BseXI | GCAGC | 4 cut(s) | 17, 20, 303, 1343 |
| BsgI | GTGCAG | 1 cut(s) | 840 |
| Bsh1236I | CGCG | 1 cut(s) | 446 |
| Bsh1285I | CGRYCG | 2 cut(s) | 343, 397 |
| BshFI | GGCC | 2 cut(s) | 71, 396 |
| BshVI | ATCGAT | 2 cut(s) | 588, 834 |
| BsiEI | CGRYCG | 2 cut(s) | 343, 397 |
| BsiHKAI | GWGCWC | 2 cut(s) | 387, 1262 |
| BsiHKCI | CYCGRG | 1 cut(s) | 501 |
| BsiSI | CCGG | 6 cut(s) | 361, 397, 408, 1239, 1310, 1324 |
| BslFI | GGGAC | 1 cut(s) | 932 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 476, 698, 789, 895, 1310 |
| BsmAI | GTCTC | 3 cut(s) | 498, 708, 808 |
| BsmBI | CGTCTC | 1 cut(s) | 498 |
| BsmFI | GGGAC | 1 cut(s) | 932 |
| BsmI | GAATGC | 1 cut(s) | 999 |
| BsnI | GGCC | 2 cut(s) | 71, 396 |
| BsoBI | CYCGRG | 1 cut(s) | 501 |
| Bsp1286I | GDGCHC | 2 cut(s) | 387, 1262 |
| Bsp13I | TCCGGA | 2 cut(s) | 1238, 1323 |
| Bsp19I | CCATGG | 1 cut(s) | 1335 |
| BspACI | CCGC | 4 cut(s) | 27, 294, 512, 1277 |
| BspANI | GGCC | 2 cut(s) | 71, 396 |
| BspCNI | CTCAG | 2 cut(s) | 271, 712 |
| BspDI | ATCGAT | 2 cut(s) | 588, 834 |
| BspEI | TCCGGA | 2 cut(s) | 1238, 1323 |
| BspFNI | CGCG | 1 cut(s) | 446 |
| BspLI | GGNNCC | 2 cut(s) | 72, 850 |
| BspPI | GGATC | 3 cut(s) | 155, 527, 800 |
| BsrBI | CCGCTC | 1 cut(s) | 1279 |
| BsrDI | GCAATG | 2 cut(s) | 94, 1110 |
| BsrI | ACTGG | 2 cut(s) | 116, 353 |
| BssECI | CCNNGG | 2 cut(s) | 692, 1335 |
| BssT1I | CCWWGG | 1 cut(s) | 1335 |
| Bst2UI | CCWGG | 2 cut(s) | 477, 693 |
| Bst4CI | ACNGT | 5 cut(s) | 380, 701, 875, 955, 1169 |
| Bst6I | CTCTTC | 2 cut(s) | 55, 589 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 218 |
| BstBAI | YACGTR | 1 cut(s) | 928 |
| BstC8I | GCNNGC | 3 cut(s) | 332, 492, 1375 |
| BstDEI | CTNAG | 4 cut(s) | 58, 258, 720, 737 |
| BstDSI | CCRYGG | 1 cut(s) | 1335 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 474 |
| BstF5I | GGATG | 3 cut(s) | 166, 223, 1345 |
| BstFNI | CGCG | 1 cut(s) | 446 |
| BstMAI | GTCTC | 3 cut(s) | 498, 708, 808 |
| BstMCI | CGRYCG | 2 cut(s) | 343, 397 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 68, 218, 300, 336 |
| BstNI | CCWGG | 2 cut(s) | 477, 693 |
| BstNSI | RCATGY | 2 cut(s) | 494, 1025 |
| BstSCI | CCNGG | 3 cut(s) | 475, 691, 1309 |
| BstSFI | CTRYAG | 1 cut(s) | 63 |
| BstUI | CGCG | 1 cut(s) | 446 |
| BstV1I | GCAGC | 4 cut(s) | 17, 20, 303, 1343 |
| BstZI | CGGCCG | 1 cut(s) | 394 |
| Bsu15I | ATCGAT | 2 cut(s) | 588, 834 |
| BsuRI | GGCC | 2 cut(s) | 71, 396 |
| BsuTUI | ATCGAT | 2 cut(s) | 588, 834 |
| BtgI | CCRYGG | 1 cut(s) | 1335 |
| BtgZI | GCGATG | 1 cut(s) | 349 |
| BtsCI | GGATG | 3 cut(s) | 166, 223, 1345 |
| BtsI | GCAGTG | 3 cut(s) | 219, 501, 852 |
| BtsIMutI | CAGTG | 3 cut(s) | 219, 501, 852 |
| Cac8I | GCNNGC | 3 cut(s) | 332, 492, 1375 |
| Cfr13I | GGNCC | 4 cut(s) | 70, 422, 509, 1321 |
| ClaI | ATCGAT | 2 cut(s) | 588, 834 |
| CpoI | CGGWCCG | 2 cut(s) | 422, 509 |
| CseI | GACGC | 3 cut(s) | 124, 435, 452 |
| Csp6I | GTAC | 2 cut(s) | 1156, 1349 |
| CspI | CGGWCCG | 2 cut(s) | 422, 509 |
| CviAII | CATG | 8 cut(s) | 200, 491, 538, 616, 800, 1022, 1075, 1336 |
| CviQI | GTAC | 2 cut(s) | 1156, 1349 |
| DdeI | CTNAG | 4 cut(s) | 58, 258, 720, 737 |
| EaeI | YGGCCR | 1 cut(s) | 394 |
| EagI | CGGCCG | 1 cut(s) | 394 |
| Eam1104I | CTCTTC | 2 cut(s) | 55, 589 |
| EarI | CTCTTC | 2 cut(s) | 55, 589 |
| Ecl136II | GAGCTC | 1 cut(s) | 1260 |
| EclXI | CGGCCG | 1 cut(s) | 394 |
| Eco130I | CCWWGG | 1 cut(s) | 1335 |
| Eco24I | GRGCYC | 1 cut(s) | 1262 |
| Eco47I | GGWCC | 3 cut(s) | 422, 509, 1321 |
| Eco52I | CGGCCG | 1 cut(s) | 394 |
| Eco53kI | GAGCTC | 1 cut(s) | 1260 |
| Eco72I | CACGTG | 1 cut(s) | 928 |
| Eco88I | CYCGRG | 1 cut(s) | 501 |
| EcoICRI | GAGCTC | 1 cut(s) | 1260 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 474 |
| EcoRII | CCWGG | 2 cut(s) | 475, 691 |
| EcoT14I | CCWWGG | 1 cut(s) | 1335 |
| EcoT22I | ATGCAT | 2 cut(s) | 136, 223 |
| EcoT38I | GRGCYC | 1 cut(s) | 1262 |
| ErhI | CCWWGG | 1 cut(s) | 1335 |
| Esp3I | CGTCTC | 1 cut(s) | 498 |
| FaeI | CATG | 8 cut(s) | 203, 494, 541, 619, 803, 1025, 1078, 1339 |
| FaqI | GGGAC | 1 cut(s) | 932 |
| FatI | CATG | 8 cut(s) | 199, 490, 537, 615, 799, 1021, 1074, 1335 |
| FauI | CCCGC | 1 cut(s) | 1284 |
| FbaI | TGATCA | 3 cut(s) | 540, 657, 708 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 9, 28, 292, 1357 |
| FokI | GGATG | 3 cut(s) | 153, 230, 1352 |
| FriOI | GRGCYC | 1 cut(s) | 1262 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 9, 28, 292, 1357 |
| FspBI | CTAG | 3 cut(s) | 305, 371, 603 |
| GluI | GCNGC | 5 cut(s) | 6, 9, 28, 292, 1357 |
| HaeIII | GGCC | 2 cut(s) | 71, 396 |
| HapII | CCGG | 6 cut(s) | 361, 397, 408, 1239, 1310, 1324 |
| HgaI | GACGC | 3 cut(s) | 124, 435, 452 |
| Hin1II | CATG | 8 cut(s) | 203, 494, 541, 619, 803, 1025, 1078, 1339 |
| HindIII | AAGCTT | 1 cut(s) | 1371 |
| HinfI | GANTC | 6 cut(s) | 19, 227, 390, 499, 716, 762 |
| HpaII | CCGG | 6 cut(s) | 361, 397, 408, 1239, 1310, 1324 |
| HphI | GGTGA | 8 cut(s) | 172, 274, 767, 874, 910, 1039, 1181, 1379 |
| Hpy166II | GTNNAC | 4 cut(s) | 610, 1030, 1158, 1293 |
| Hpy188I | TCNGA | 6 cut(s) | 226, 389, 451, 713, 721, 1198 |
| Hpy188III | TCNNGA | 4 cut(s) | 16, 503, 1239, 1324 |
| Hpy8I | GTNNAC | 4 cut(s) | 610, 1030, 1158, 1293 |
| Hpy99I | CGWCG | 1 cut(s) | 437 |
| HpyAV | CCTTC | 2 cut(s) | 614, 1193 |
| HpyCH4III | ACNGT | 5 cut(s) | 380, 701, 875, 955, 1169 |
| HpyCH4IV | ACGT | 5 cut(s) | 177, 432, 482, 635, 927 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 68, 218, 300, 336 |
| HpyF3I | CTNAG | 4 cut(s) | 58, 258, 720, 737 |
| HpySE526I | ACGT | 5 cut(s) | 177, 432, 482, 635, 927 |
| Hsp92II | CATG | 8 cut(s) | 203, 494, 541, 619, 803, 1025, 1078, 1339 |
| Kpn2I | TCCGGA | 2 cut(s) | 1238, 1323 |
| Ksp22I | TGATCA | 3 cut(s) | 540, 657, 708 |
| LmnI | GCTCC | 7 cut(s) | 599, 776, 854, 1120, 1220, 1257, 1284 |
| Lsp1109I | GCAGC | 4 cut(s) | 17, 20, 303, 1343 |
| LweI | GCATC | 6 cut(s) | 121, 208, 230, 326, 826, 1330 |
| MaeI | CTAG | 3 cut(s) | 305, 371, 603 |
| MaeII | ACGT | 5 cut(s) | 177, 432, 482, 635, 927 |
| MaeIII | GTNAC | 4 cut(s) | 178, 344, 496, 859 |
| MbiI | CCGCTC | 1 cut(s) | 1279 |
| MboII | GAAGA | 5 cut(s) | 37, 42, 376, 606, 1139 |
| MfeI | CAATTG | 1 cut(s) | 1062 |
| MhlI | GDGCHC | 2 cut(s) | 387, 1262 |
| MluCI | AATT | 6 cut(s) | 193, 641, 1062, 1086, 1186, 1296 |
| MluI | ACGCGT | 1 cut(s) | 444 |
| MlyI | GAGTC | 2 cut(s) | 493, 710 |
| MmeI | TCCRAC | 1 cut(s) | 894 |
| MnlI | CCTC | 9 cut(s) | 77, 174, 404, 590, 715, 889, 909, 1008, 1128 |
| Mph1103I | ATGCAT | 2 cut(s) | 136, 223 |
| MroI | TCCGGA | 2 cut(s) | 1238, 1323 |
| MseI | TTAA | 5 cut(s) | 174, 192, 485, 632, 963 |
| MspA1I | CMGCKG | 1 cut(s) | 294 |
| MspI | CCGG | 6 cut(s) | 361, 397, 408, 1239, 1310, 1324 |
| MspR9I | CCNGG | 3 cut(s) | 477, 693, 1311 |
| MunI | CAATTG | 1 cut(s) | 1062 |
| Mva1269I | GAATGC | 1 cut(s) | 999 |
| MvaI | CCWGG | 2 cut(s) | 477, 693 |
| MvnI | CGCG | 1 cut(s) | 446 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 68, 218, 300, 336 |
| NciI | CCSGG | 1 cut(s) | 1311 |
| NcoI | CCATGG | 1 cut(s) | 1335 |
| NlaIII | CATG | 8 cut(s) | 203, 494, 541, 619, 803, 1025, 1078, 1339 |
| NlaIV | GGNNCC | 2 cut(s) | 72, 850 |
| NmuCI | GTSAC | 2 cut(s) | 178, 496 |
| NsiI | ATGCAT | 2 cut(s) | 136, 223 |
| NspI | RCATGY | 2 cut(s) | 494, 1025 |
| PaeI | GCATGC | 1 cut(s) | 494 |
| PaeR7I | CTCGAG | 1 cut(s) | 501 |
| PciI | ACATGT | 1 cut(s) | 1021 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 156 |
| PctI | GAATGC | 1 cut(s) | 999 |
| PfeI | GAWTC | 4 cut(s) | 19, 227, 390, 762 |
| PflFI | GACNNNGTC | 1 cut(s) | 800 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 789 |
| PkrI | GCNGC | 5 cut(s) | 7, 10, 29, 293, 1358 |
| Ple19I | CGATCG | 1 cut(s) | 343 |
| PleI | GAGTC | 2 cut(s) | 493, 710 |
| PmaCI | CACGTG | 1 cut(s) | 928 |
| PmlI | CACGTG | 1 cut(s) | 928 |
| PpsI | GAGTC | 2 cut(s) | 493, 710 |
| Ppu21I | YACGTR | 1 cut(s) | 928 |
| PscI | ACATGT | 1 cut(s) | 1021 |
| PsiI | TTATAA | 1 cut(s) | 312 |
| Psp124BI | GAGCTC | 1 cut(s) | 1262 |
| Psp1406I | AACGTT | 2 cut(s) | 482, 635 |
| Psp6I | CCWGG | 2 cut(s) | 475, 691 |
| PspCI | CACGTG | 1 cut(s) | 928 |
| PspGI | CCWGG | 2 cut(s) | 475, 691 |
| PspN4I | GGNNCC | 2 cut(s) | 72, 850 |
| PspPI | GGNCC | 4 cut(s) | 70, 422, 509, 1321 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1022, 1054 |
| PsyI | GACNNNGTC | 1 cut(s) | 800 |
| PvuI | CGATCG | 1 cut(s) | 343 |
| RsaI | GTAC | 2 cut(s) | 1157, 1350 |
| RsaNI | GTAC | 2 cut(s) | 1156, 1349 |
| Rsr2I | CGGWCCG | 2 cut(s) | 422, 509 |
| RsrII | CGGWCCG | 2 cut(s) | 422, 509 |
| SacI | GAGCTC | 1 cut(s) | 1262 |
| SaqAI | TTAA | 5 cut(s) | 174, 192, 485, 632, 963 |
| SatI | GCNGC | 5 cut(s) | 6, 9, 28, 292, 1357 |
| Sau96I | GGNCC | 4 cut(s) | 70, 422, 509, 1321 |
| ScaI | AGTACT | 1 cut(s) | 1350 |
| SchI | GAGTC | 2 cut(s) | 493, 710 |
| ScrFI | CCNGG | 3 cut(s) | 477, 693, 1311 |
| SduI | GDGCHC | 2 cut(s) | 387, 1262 |
| SfaNI | GCATC | 6 cut(s) | 121, 208, 230, 326, 826, 1330 |
| SfcI | CTRYAG | 1 cut(s) | 63 |
| Sfr274I | CTCGAG | 1 cut(s) | 501 |
| SinI | GGWCC | 3 cut(s) | 422, 509, 1321 |
| SlaI | CTCGAG | 1 cut(s) | 501 |
| SmlI | CTYRAG | 1 cut(s) | 501 |
| SmoI | CTYRAG | 1 cut(s) | 501 |
| SphI | GCATGC | 1 cut(s) | 494 |
| Sse9I | AATT | 6 cut(s) | 193, 641, 1062, 1086, 1186, 1296 |
| SsiI | CCGC | 4 cut(s) | 27, 294, 512, 1277 |
| SspI | AATATT | 2 cut(s) | 670, 787 |
| SspMI | CTAG | 3 cut(s) | 305, 371, 603 |
| SstI | GAGCTC | 1 cut(s) | 1262 |
| StyD4I | CCNGG | 3 cut(s) | 475, 691, 1309 |
| StyI | CCWWGG | 1 cut(s) | 1335 |
| TaaI | ACNGT | 5 cut(s) | 380, 701, 875, 955, 1169 |
| TaiI | ACGT | 5 cut(s) | 180, 435, 485, 638, 930 |
| TaqI | TCGA | 7 cut(s) | 82, 502, 588, 795, 834, 933, 1300 |
| TaqII | GACCGA | 1 cut(s) | 439 |
| TasI | AATT | 6 cut(s) | 193, 641, 1062, 1086, 1186, 1296 |
| TatI | WGTACW | 2 cut(s) | 1155, 1348 |
| TauI | GCSGC | 1 cut(s) | 30 |
| TfiI | GAWTC | 4 cut(s) | 19, 227, 390, 762 |
| Tru1I | TTAA | 5 cut(s) | 174, 192, 485, 632, 963 |
| Tru9I | TTAA | 5 cut(s) | 174, 192, 485, 632, 963 |
| TscAI | CASTG | 3 cut(s) | 219, 501, 859 |
| TseFI | GTSAC | 2 cut(s) | 178, 496 |
| TseI | GCWGC | 4 cut(s) | 5, 8, 291, 1356 |
| Tsp45I | GTSAC | 2 cut(s) | 178, 496 |
| TspDTI | ATGAA | 3 cut(s) | 1091, 1099, 1140 |
| TspGWI | ACGGA | 4 cut(s) | 435, 522, 1026, 1233 |
| TspRI | CASTG | 3 cut(s) | 219, 501, 859 |
| Tth111I | GACNNNGTC | 1 cut(s) | 800 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 789 |
| VpaK11BI | GGWCC | 3 cut(s) | 422, 509, 1321 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 474 |
| XceI | RCATGY | 2 cut(s) | 494, 1025 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1170 |
| XhoI | CTCGAG | 1 cut(s) | 501 |
| XspI | CTAG | 3 cut(s) | 305, 371, 603 |
| ZrmI | AGTACT | 1 cut(s) | 1350 |
| Zsp2I | ATGCAT | 2 cut(s) | 136, 223 |