Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0011725

Physical Location & Seq

Genomic Coordinates Reverse (-)

54384864 .. 54386668

Gene Structure 1805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG391000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGTCACAGACAATGGCACTGAATAGACTCGGTTCAATCTTTCTCGTCTTATTTTTGTTGTTCTGTGTTGCTGTAATTGTCAACGCCGAAAATGATACTGCGGAAGATGAGTACTGGAAAGAACGAGCCGCTGTTGCTATGAAAATTGCCGAGGAATCTGTTCATCCAAATCCCCAGGAAGTTACCGAGGAGATCAATGCTGACGTACACGAGCTTATCATGGGGCAAAATAGCACGAAAAGGAAATTGAGGGGTTCCAAGGGATACGACGGTCCCTGCGAGGCCACCAACCCAATCGACGCATGCTGGCGGTGTGACCCTGATTGGGCCGACAACCGCGAGAAGATCGTCGATTGCGTCAAGGGTTTCGGCAAAAAGACTACCGGCGGCAAGGGTGGGCCCATCTACATTGTCACTGATGACTCAGATGACGACATTGTGAACCCTAAACCAGGAACTCTCCGCGACGCAGTGATCCAGAAAGGTCCTCTATGGATCATCTTTGAGCATAGCATGGTGATTCGTCTGCAACAAGAGCTGATGGTATCAAGTGACAAGACCATCGATGGTAGAGGAGCCAACGTTGTGATTGCCTTTGGTGGTGGCATCACTCTTCAGTATGTGAAAAATATCATCATCACGAACATTCACGTTAAGGACATTGACTCCAAAGCCGGTGGTATGATCAGAGACTGCGTGGATCATTTTGGTTTTAGGACCAGGAGCGATGGCGATGGCATCTCCCTCTTCGGCGCTTCCAACGTCTGGATCGACCATGTTTCCATGGCGAGGTGCGACGACGGACTCATCGACGCTATCATGAGTTCCACTGCTATCACCATCTCCAACTCCCACTTCACTGACCACAACGAGGCAATGTTGTTCGGGGCAAGTAATAGCTACTCTCAAGACAAGATCATGCAAGTAACGGTCGCGTTCAACCACTTTGGGCAGGGATTGATTCAGAGAATGCCAAGGTGCCGATTTGGATTCTTCCACGTGGTGAACAATGACTACACCCATTGGATAATGTATGCTATTGGTGGTAACATGAACCCTACCATCATCAGCCAGGGTAACAGGTACATTGCTCCTGAAAGCCATGTCGCAAAAGAGGTGACCAAGAGGGAGTACACAGACGAGTCGGAATGGAAGCACTGGAATTGGAGATCCGAGGGAGACTTGATGGTGAATGGAGCATATTTCGTTGAATCCGGGGACCCCAACGTTGCGAAATCAGAGAAGATAGAAATGTTGCCGTTCAAGCCCGGGACGTTGGCCTCAACCCTTACTAGATTTTCCGGCGCTCTAGAGTGCTGTGTTGGCCAACCATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0009664 GO:0009987 GO:0016043 GO:0016829 GO:0016835 GO:0016837 GO:0030570 GO:0045229 GO:0071554 GO:0071555 GO:0071669 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko00040 ko02024 map00040 map02024

Pfam Domains

Protein Families

Pec_lyase_C Pec_lyase_N

Protein Analysis

445

Amino Acids

49.41

Weight (kDa)

5.34

Isoelectric Point (pI)

28.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pec_lyase_N	PF04431	36 - 83	3.3e-13	Pectate lyase, N terminus
Pectate_lyase_4	PF00544	178 - 380	1.4e-19	Pectate lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14420 AT2G02720
fragaria_vesca	FvH4_4g31900
malus_domestica	MD13G1078400.v1.1 MD16G1078000.v1.1 MD16G1078100.v1.1
prunus_persica	Prupe.1G268500_v2.0.a1 Prupe.1G268700_v2.0.a1
pyrus_communis	pycom13g06810 pycom16g06740 pycom16g06760
rosa_chinensis	RchiOBHm_Chr4g0440551
rosa_rugosa	Rorug04G0326600
rosa_samantha	Rh4AG378300 Rh4BG391000 Rh4CG405700 Rh4DG384700
rosa_wichuraiana	Rw4G032390 Rw4G032490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	978
AccB7I	CCANNNNNTGG	1 cut(s)	765
AccII	CGCG	3 cut(s)	339, 465, 935
AciI	CCGC	6 cut(s)	101, 129, 310, 337, 387, 463
AclI	AACGTT	2 cut(s)	582, 1227
AclWI	GGATC	5 cut(s)	469, 503, 708, 776, 1164
AcoI	YGGCCR	1 cut(s)	1324
AcuI	CTGAAG	1 cut(s)	599
AcvI	CACGTG	1 cut(s)	1000
AdeI	CACNNNGTG	1 cut(s)	1003
AfaI	GTAC	4 cut(s)	113, 207, 1085, 1133
AfiI	CCNNNNNNNGG	5 cut(s)	325, 452, 765, 789, 871
AgsI	TTSAA	4 cut(s)	36, 940, 1211, 1264
AjnI	CCWGG	4 cut(s)	174, 451, 719, 1071
AjuI	GAANNNNNNNTTGG	2 cut(s)	839, 871
AluBI	AGCT	3 cut(s)	214, 538, 900
AluI	AGCT	3 cut(s)	214, 538, 900
Alw26I	GTCTC	2 cut(s)	684, 1173
AlwI	GGATC	5 cut(s)	469, 503, 708, 776, 1164
AlwNI	CAGNNNCTG	1 cut(s)	693
Ama87I	CYCGRG	1 cut(s)	1268
AoxI	GGCC	5 cut(s)	282, 327, 398, 1278, 1324
ApaI	GGGCCC	1 cut(s)	402
Asp700I	GAANNNNTTC	1 cut(s)	159
AspLEI	GCGC	2 cut(s)	755, 1307
AspS9I	GGNCC	7 cut(s)	272, 327, 398, 399, 485, 717, 1219
AsuC2I	CCSGG	3 cut(s)	1216, 1269, 1270
AsuHPI	GGTGA	5 cut(s)	529, 829, 1015, 1129, 1201
AvaI	CYCGRG	1 cut(s)	1268
AvaII	GGWCC	4 cut(s)	272, 485, 717, 1219
BaeGI	GKGCMC	1 cut(s)	402
BaeI	ACNNNNGTAYC	2 cut(s)	256, 289
BalI	TGGCCA	1 cut(s)	1326
BanI	GGYRCC	1 cut(s)	978
BanII	GRGCYC	1 cut(s)	402
BauI	CACGAG	1 cut(s)	209
BbrPI	CACGTG	1 cut(s)	1000
BccI	CCATC	9 cut(s)	410, 535, 560, 569, 722, 728, 848, 1070, 1180
BceAI	ACGGC	1 cut(s)	1243
BciT130I	CCWGG	4 cut(s)	176, 453, 721, 1073
BciVI	GTATCC	1 cut(s)	257
BclI	TGATCA	1 cut(s)	684
BcnI	CCSGG	3 cut(s)	1216, 1269, 1270
BcoDI	GTCTC	2 cut(s)	684, 1173
BfaI	CTAG	3 cut(s)	1293, 1310, 1336
BfoI	RGCGCY	2 cut(s)	756, 1308
BfuI	GTATCC	1 cut(s)	257
BisI	GCNGC	2 cut(s)	129, 388
BlsI	GCNGC	2 cut(s)	130, 389
BmcAI	AGTACT	1 cut(s)	113
Bme1390I	CCNGG	7 cut(s)	176, 453, 721, 1073, 1216, 1269, 1270
Bme18I	GGWCC	4 cut(s)	272, 485, 717, 1219
BmeT110I	CYCGRG	1 cut(s)	1268
BmgT120I	GGNCC	7 cut(s)	272, 327, 398, 399, 485, 717, 1219
BmiI	GGNNCC	7 cut(s)	256, 274, 400, 577, 980, 1220, 1221
BmrFI	CCNGG	7 cut(s)	176, 453, 721, 1073, 1216, 1269, 1270
BmsI	GCATC	2 cut(s)	615, 747
BpuEI	CTTGAG	1 cut(s)	891
BpuMI	CCSGG	3 cut(s)	1216, 1269, 1270
Bsa29I	ATCGAT	1 cut(s)	564
BsaAI	YACGTR	1 cut(s)	1000
BsaXI	ACNNNNNCTCC	4 cut(s)	567, 597, 650, 680
Bsc4I	CCNNNNNNNGG	5 cut(s)	325, 452, 765, 789, 871
Bse118I	RCCGGY	2 cut(s)	383, 674
Bse1I	ACTGG	2 cut(s)	119, 1163
Bse3DI	GCAATG	2 cut(s)	882, 1086
BseBI	CCWGG	4 cut(s)	176, 453, 721, 1073
BseCI	ATCGAT	1 cut(s)	564
BseGI	GGATG	1 cut(s)	163
BseLI	CCNNNNNNNGG	5 cut(s)	325, 452, 765, 789, 871
BseMI	GCAATG	2 cut(s)	882, 1086
BseMII	CTCAG	1 cut(s)	438
BseNI	ACTGG	2 cut(s)	119, 1163
BseRI	GAGGAG	2 cut(s)	203, 588
BseSI	GKGCMC	1 cut(s)	402
Bsh1236I	CGCG	3 cut(s)	339, 465, 935
Bsh1285I	CGRYCG	1 cut(s)	933
BshFI	GGCC	5 cut(s)	284, 329, 400, 1280, 1326
BshNI	GGYRCC	1 cut(s)	978
BshVI	ATCGAT	1 cut(s)	564
BsiEI	CGRYCG	1 cut(s)	933
BsiHKCI	CYCGRG	1 cut(s)	1268
BsiSI	CCGG	5 cut(s)	384, 675, 1215, 1269, 1302
BslFI	GGGAC	3 cut(s)	258, 1232, 1285
BslI	CCNNNNNNNGG	5 cut(s)	325, 452, 765, 789, 871
BsmAI	GTCTC	2 cut(s)	684, 1173
BsmFI	GGGAC	3 cut(s)	258, 1232, 1285
BsmI	GAATGC	1 cut(s)	975
BsnI	GGCC	5 cut(s)	284, 329, 400, 1280, 1326
BsoBI	CYCGRG	1 cut(s)	1268
Bsp120I	GGGCCC	1 cut(s)	398
Bsp1286I	GDGCHC	1 cut(s)	402
Bsp143I	GATC	9 cut(s)	192, 345, 474, 495, 684, 700, 768, 915, 1169
Bsp19I	CCATGG	1 cut(s)	783
BspACI	CCGC	6 cut(s)	101, 129, 310, 337, 387, 463
BspANI	GGCC	5 cut(s)	284, 329, 400, 1280, 1326
BspCNI	CTCAG	1 cut(s)	437
BspDI	ATCGAT	1 cut(s)	564
BspFNI	CGCG	3 cut(s)	339, 465, 935
BspHI	TCATGA	1 cut(s)	819
BspLI	GGNNCC	7 cut(s)	256, 274, 400, 577, 980, 1220, 1221
BspPI	GGATC	5 cut(s)	469, 503, 708, 776, 1164
BspT107I	GGYRCC	1 cut(s)	978
BsrDI	GCAATG	2 cut(s)	882, 1086
BsrFI	RCCGGY	2 cut(s)	383, 674
BsrI	ACTGG	2 cut(s)	119, 1163
BssAI	RCCGGY	2 cut(s)	383, 674
BssMI	GATC	9 cut(s)	192, 345, 474, 495, 684, 700, 768, 915, 1169
BssSI	CACGAG	1 cut(s)	209
BssT1I	CCWWGG	3 cut(s)	258, 783, 974
Bst2BI	CACGAG	1 cut(s)	209
Bst2UI	CCWGG	4 cut(s)	176, 453, 721, 1073
Bst4CI	ACNGT	2 cut(s)	272, 931
Bst6I	CTCTTC	2 cut(s)	618, 752
BstBAI	YACGTR	1 cut(s)	1000
BstC8I	GCNNGC	2 cut(s)	304, 308
BstDEI	CTNAG	1 cut(s)	424
BstDSI	CCRYGG	1 cut(s)	783
BstEII	GGTNACC	1 cut(s)	1117
BstENI	CCTNNNNNAGG	1 cut(s)	450
BstF5I	GGATG	1 cut(s)	163
BstFNI	CGCG	3 cut(s)	339, 465, 935
BstH2I	RGCGCY	2 cut(s)	756, 1308
BstHHI	GCGC	2 cut(s)	755, 1307
BstKTI	GATC	9 cut(s)	195, 348, 477, 498, 687, 703, 771, 918, 1172
BstMAI	GTCTC	2 cut(s)	684, 1173
BstMBI	GATC	9 cut(s)	192, 345, 474, 495, 684, 700, 768, 915, 1169
BstMCI	CGRYCG	1 cut(s)	933
BstMWI	GCNNNNNNNGC	5 cut(s)	134, 535, 1264, 1323, 1332
BstNI	CCWGG	4 cut(s)	176, 453, 721, 1073
BstNSI	RCATGY	1 cut(s)	306
BstPI	GGTNACC	1 cut(s)	1117
BstSCI	CCNGG	7 cut(s)	174, 451, 719, 1071, 1214, 1267, 1268
BstSLI	GKGCMC	1 cut(s)	402
BstUI	CGCG	3 cut(s)	339, 465, 935
BstX2I	RGATCY	1 cut(s)	1169
BstYI	RGATCY	1 cut(s)	1169
Bsu15I	ATCGAT	1 cut(s)	564
BsuI	GTATCC	1 cut(s)	257
BsuRI	GGCC	5 cut(s)	284, 329, 400, 1280, 1326
BsuTUI	ATCGAT	1 cut(s)	564
BtgI	CCRYGG	1 cut(s)	783
BtgZI	GCGATG	2 cut(s)	741, 747
BtsCI	GGATG	1 cut(s)	163
BtsI	GCAGTG	2 cut(s)	477, 828
BtsIMutI	CAGTG	6 cut(s)	17, 414, 477, 828, 858, 1156
Cac8I	GCNNGC	2 cut(s)	304, 308
CaiI	CAGNNNCTG	1 cut(s)	693
CciI	TCATGA	1 cut(s)	819
CfoI	GCGC	2 cut(s)	755, 1307
Cfr10I	RCCGGY	2 cut(s)	383, 674
Cfr13I	GGNCC	7 cut(s)	272, 327, 398, 399, 485, 717, 1219
Cfr9I	CCCGGG	1 cut(s)	1268
ClaI	ATCGAT	1 cut(s)	564
CseI	GACGC	4 cut(s)	308, 346, 476, 821
Csp6I	GTAC	4 cut(s)	112, 206, 1084, 1132
CspCI	CAANNNNNGTGG	2 cut(s)	658, 693
CviQI	GTAC	4 cut(s)	112, 206, 1084, 1132
DdeI	CTNAG	1 cut(s)	424
DpnI	GATC	9 cut(s)	194, 347, 476, 497, 686, 702, 770, 917, 1171
DpnII	GATC	9 cut(s)	192, 345, 474, 495, 684, 700, 768, 915, 1169
DraIII	CACNNNGTG	1 cut(s)	1003
EaeI	YGGCCR	1 cut(s)	1324
Eam1104I	CTCTTC	2 cut(s)	618, 752
EarI	CTCTTC	2 cut(s)	618, 752
Eco130I	CCWWGG	3 cut(s)	258, 783, 974
Eco24I	GRGCYC	1 cut(s)	402
Eco47I	GGWCC	4 cut(s)	272, 485, 717, 1219
Eco57I	CTGAAG	1 cut(s)	599
Eco72I	CACGTG	1 cut(s)	1000
Eco88I	CYCGRG	1 cut(s)	1268
Eco91I	GGTNACC	1 cut(s)	1117
EcoNI	CCTNNNNNAGG	1 cut(s)	450
EcoO109I	RGGNCCY	2 cut(s)	485, 1219
EcoO65I	GGTNACC	1 cut(s)	1117
EcoRII	CCWGG	4 cut(s)	174, 451, 719, 1071
EcoT14I	CCWWGG	3 cut(s)	258, 783, 974
EcoT38I	GRGCYC	1 cut(s)	402
ErhI	CCWWGG	3 cut(s)	258, 783, 974
FaqI	GGGAC	3 cut(s)	258, 1232, 1285
FbaI	TGATCA	1 cut(s)	684
Fnu4HI	GCNGC	2 cut(s)	129, 388
FokI	GGATG	1 cut(s)	150
FriOI	GRGCYC	1 cut(s)	402
Fsp4HI	GCNGC	2 cut(s)	129, 388
FspBI	CTAG	3 cut(s)	1293, 1310, 1336
GlaI	GCGC	2 cut(s)	754, 1306
GluI	GCNGC	2 cut(s)	129, 388
HaeII	RGCGCY	2 cut(s)	756, 1308
HaeIII	GGCC	5 cut(s)	284, 329, 400, 1280, 1326
HapII	CCGG	5 cut(s)	384, 675, 1215, 1269, 1302
HgaI	GACGC	4 cut(s)	308, 346, 476, 821
HhaI	GCGC	2 cut(s)	755, 1307
Hin6I	GCGC	2 cut(s)	753, 1305
HinP1I	GCGC	2 cut(s)	753, 1305
HincII	GTYRAC	1 cut(s)	82
HindII	GTYRAC	1 cut(s)	82
HpaII	CCGG	5 cut(s)	384, 675, 1215, 1269, 1302
HphI	GGTGA	5 cut(s)	529, 829, 1015, 1129, 1201
Hpy166II	GTNNAC	5 cut(s)	82, 208, 442, 1006, 1134
Hpy188I	TCNGA	6 cut(s)	427, 689, 966, 1147, 1174, 1240
Hpy188III	TCNNGA	7 cut(s)	478, 640, 766, 820, 908, 1094, 1310
Hpy8I	GTNNAC	5 cut(s)	82, 208, 442, 1006, 1134
Hpy99I	CGWCG	7 cut(s)	272, 302, 353, 470, 800, 803, 815
HpyCH4III	ACNGT	2 cut(s)	272, 931
HpyCH4IV	ACGT	7 cut(s)	204, 582, 651, 762, 999, 1227, 1274
HpyCH4V	TGCA	2 cut(s)	529, 922
HpyF10VI	GCNNNNNNNGC	5 cut(s)	134, 535, 1264, 1323, 1332
HpyF3I	CTNAG	1 cut(s)	424
HpySE526I	ACGT	7 cut(s)	204, 582, 651, 762, 999, 1227, 1274
HspAI	GCGC	2 cut(s)	753, 1305
KflI	GGGWCCC	1 cut(s)	1219
Ksp22I	TGATCA	1 cut(s)	684
Kzo9I	GATC	9 cut(s)	192, 345, 474, 495, 684, 700, 768, 915, 1169
LmnI	GCTCC	4 cut(s)	575, 723, 1096, 1196
LweI	GCATC	2 cut(s)	615, 747
MaeI	CTAG	3 cut(s)	1293, 1310, 1336
MaeII	ACGT	7 cut(s)	204, 582, 651, 762, 999, 1227, 1274
MaeIII	GTNAC	9 cut(s)	3, 181, 314, 412, 551, 925, 1046, 1076, 1117
MalI	GATC	9 cut(s)	194, 347, 476, 497, 686, 702, 770, 917, 1171
MboI	GATC	9 cut(s)	192, 345, 474, 495, 684, 700, 768, 915, 1169
MboII	GAAGA	6 cut(s)	116, 355, 605, 739, 985, 1255
MflI	RGATCY	1 cut(s)	1169
MhlI	GDGCHC	1 cut(s)	402
MlsI	TGGCCA	1 cut(s)	1326
MluCI	AATT	4 cut(s)	75, 144, 245, 1162
MluNI	TGGCCA	1 cut(s)	1326
MlyI	GAGTC	5 cut(s)	21, 416, 659, 798, 1151
MmeI	TCCRAC	3 cut(s)	783, 870, 1125
Mox20I	TGGCCA	1 cut(s)	1326
MroXI	GAANNNNTTC	1 cut(s)	159
MscI	TGGCCA	1 cut(s)	1326
MseI	TTAA	1 cut(s)	654
Msp20I	TGGCCA	1 cut(s)	1326
MspA1I	CMGCKG	1 cut(s)	131
MspI	CCGG	5 cut(s)	384, 675, 1215, 1269, 1302
MspR9I	CCNGG	7 cut(s)	176, 453, 721, 1073, 1216, 1269, 1270
Mva1269I	GAATGC	1 cut(s)	975
MvaI	CCWGG	4 cut(s)	176, 453, 721, 1073
MvnI	CGCG	3 cut(s)	339, 465, 935
MwoI	GCNNNNNNNGC	5 cut(s)	134, 535, 1264, 1323, 1332
NciI	CCSGG	3 cut(s)	1216, 1269, 1270
NcoI	CCATGG	1 cut(s)	783
NdeII	GATC	9 cut(s)	192, 345, 474, 495, 684, 700, 768, 915, 1169
NlaIV	GGNNCC	7 cut(s)	256, 274, 400, 577, 980, 1220, 1221
NmeAIII	GCCGAG	1 cut(s)	175
NmuCI	GTSAC	5 cut(s)	3, 314, 412, 551, 1117
NspI	RCATGY	1 cut(s)	306
PaeI	GCATGC	1 cut(s)	306
PagI	TCATGA	1 cut(s)	819
PcsI	WCGNNNNNNNCGW	4 cut(s)	276, 354, 768, 807
PctI	GAATGC	1 cut(s)	975
PdmI	GAANNNNTTC	1 cut(s)	159
PfeI	GAWTC	5 cut(s)	155, 520, 961, 990, 1211
PflMI	CCANNNNNTGG	1 cut(s)	765
PkrI	GCNGC	2 cut(s)	130, 389
PleI	GAGTC	5 cut(s)	21, 416, 659, 798, 1150
PmaCI	CACGTG	1 cut(s)	1000
PmlI	CACGTG	1 cut(s)	1000
PpsI	GAGTC	5 cut(s)	21, 416, 659, 798, 1150
Ppu21I	YACGTR	1 cut(s)	1000
PpuMI	RGGWCCY	2 cut(s)	485, 1219
Psp1406I	AACGTT	2 cut(s)	582, 1227
Psp5II	RGGWCCY	2 cut(s)	485, 1219
Psp6I	CCWGG	4 cut(s)	174, 451, 719, 1071
PspCI	CACGTG	1 cut(s)	1000
PspEI	GGTNACC	1 cut(s)	1117
PspGI	CCWGG	4 cut(s)	174, 451, 719, 1071
PspN4I	GGNNCC	7 cut(s)	256, 274, 400, 577, 980, 1220, 1221
PspOMI	GGGCCC	1 cut(s)	398
PspPI	GGNCC	7 cut(s)	272, 327, 398, 399, 485, 717, 1219
PspPPI	RGGWCCY	2 cut(s)	485, 1219
PsrI	GAACNNNNNNTAC	2 cut(s)	998, 1030
PstNI	CAGNNNCTG	1 cut(s)	693
PsuI	RGATCY	1 cut(s)	1169
RsaI	GTAC	4 cut(s)	113, 207, 1085, 1133
RsaNI	GTAC	4 cut(s)	112, 206, 1084, 1132
SaqAI	TTAA	1 cut(s)	654
SatI	GCNGC	2 cut(s)	129, 388
Sau3AI	GATC	9 cut(s)	192, 345, 474, 495, 684, 700, 768, 915, 1169
Sau96I	GGNCC	7 cut(s)	272, 327, 398, 399, 485, 717, 1219
ScaI	AGTACT	1 cut(s)	113
SchI	GAGTC	5 cut(s)	21, 416, 659, 798, 1151
ScrFI	CCNGG	7 cut(s)	176, 453, 721, 1073, 1216, 1269, 1270
SduI	GDGCHC	1 cut(s)	402
SfaNI	GCATC	2 cut(s)	615, 747
SinI	GGWCC	4 cut(s)	272, 485, 717, 1219
SmaI	CCCGGG	1 cut(s)	1270
SmlI	CTYRAG	1 cut(s)	906
SmoI	CTYRAG	1 cut(s)	906
SphI	GCATGC	1 cut(s)	306
Sse9I	AATT	4 cut(s)	75, 144, 245, 1162
SsiI	CCGC	6 cut(s)	101, 129, 310, 337, 387, 463
SspMI	CTAG	3 cut(s)	1293, 1310, 1336
StyD4I	CCNGG	7 cut(s)	174, 451, 719, 1071, 1214, 1267, 1268
StyI	CCWWGG	3 cut(s)	258, 783, 974
TaaI	ACNGT	2 cut(s)	272, 931
TaiI	ACGT	7 cut(s)	207, 585, 654, 765, 1002, 1230, 1277
TaqI	TCGA	5 cut(s)	297, 351, 564, 771, 810
TasI	AATT	4 cut(s)	75, 144, 245, 1162
TatI	WGTACW	2 cut(s)	111, 1131
TauI	GCSGC	2 cut(s)	131, 390
TfiI	GAWTC	5 cut(s)	155, 520, 961, 990, 1211
Tru1I	TTAA	1 cut(s)	654
Tru9I	TTAA	1 cut(s)	654
TscAI	CASTG	6 cut(s)	24, 421, 477, 835, 865, 1163
TseFI	GTSAC	5 cut(s)	3, 314, 412, 551, 1117
Tsp45I	GTSAC	5 cut(s)	3, 314, 412, 551, 1117
TspDTI	ATGAA	3 cut(s)	152, 155, 1067
TspGWI	ACGGA	1 cut(s)	816
TspMI	CCCGGG	1 cut(s)	1268
TspRI	CASTG	6 cut(s)	24, 421, 477, 835, 865, 1163
Van91I	CCANNNNNTGG	1 cut(s)	765
VpaK11BI	GGWCC	4 cut(s)	272, 485, 717, 1219
XagI	CCTNNNNNAGG	1 cut(s)	450
XbaI	TCTAGA	1 cut(s)	1309
XceI	RCATGY	1 cut(s)	306
XmaI	CCCGGG	1 cut(s)	1268
XmnI	GAANNNNTTC	1 cut(s)	159
XspI	CTAG	3 cut(s)	1293, 1310, 1336
ZrmI	AGTACT	1 cut(s)	113

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.