Pectate lyase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G14420 AT2G02720 |
| fragaria_vesca | FvH4_4g31900 |
| malus_domestica | MD13G1078400.v1.1 MD16G1078000.v1.1 MD16G1078100.v1.1 |
| prunus_persica | Prupe.1G268500_v2.0.a1 Prupe.1G268700_v2.0.a1 |
| pyrus_communis | pycom13g06810 pycom16g06740 pycom16g06760 |
| rosa_chinensis | RchiOBHm_Chr4g0440551 |
| rosa_rugosa | Rorug04G0326600 |
| rosa_samantha | Rh4AG378300 Rh4BG391000 Rh4CG405700 Rh4DG384700 |
| rosa_wichuraiana | Rw4G032390 Rw4G032490 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 890, 981, 1109 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 455, 768 |
| AccI | GTMKAC | 1 cut(s) | 702 |
| AccII | CGCG | 1 cut(s) | 800 |
| AccIII | TCCGGA | 1 cut(s) | 1223 |
| AciI | CCGC | 4 cut(s) | 340, 390, 800, 1047 |
| AclI | AACGTT | 2 cut(s) | 585, 765 |
| AclWI | GGATC | 5 cut(s) | 167, 416, 506, 1215, 1228 |
| AcoI | YGGCCR | 1 cut(s) | 285 |
| AcyI | GRCGYC | 1 cut(s) | 1110 |
| AdeI | CACNNNGTG | 1 cut(s) | 475 |
| AfaI | GTAC | 2 cut(s) | 102, 269 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 455, 677, 768, 1106 |
| AgsI | TTSAA | 5 cut(s) | 167, 199, 943, 1214, 1267 |
| AhlI | ACTAGT | 1 cut(s) | 551 |
| AjiI | CACGTC | 1 cut(s) | 877 |
| AjnI | CCWGG | 2 cut(s) | 454, 1074 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 842, 874 |
| AluBI | AGCT | 5 cut(s) | 217, 541, 836, 903, 1291 |
| AluI | AGCT | 5 cut(s) | 217, 541, 836, 903, 1291 |
| Alw21I | GWGCWC | 1 cut(s) | 1312 |
| Alw26I | GTCTC | 1 cut(s) | 687 |
| AlwI | GGATC | 5 cut(s) | 167, 416, 506, 1215, 1228 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 176 |
| Aor13HI | TCCGGA | 1 cut(s) | 1223 |
| AoxI | GGCC | 7 cut(s) | 150, 285, 330, 396, 400, 488, 936 |
| ApeKI | GCWGC | 4 cut(s) | 529, 532, 541, 1050 |
| AspLEI | GCGC | 3 cut(s) | 605, 800, 1112 |
| AspS9I | GGNCC | 6 cut(s) | 275, 330, 401, 488, 720, 1132 |
| AsuC2I | CCSGG | 1 cut(s) | 1272 |
| AsuHPI | GGTGA | 8 cut(s) | 178, 427, 532, 634, 832, 857, 1018, 1132 |
| AvaII | GGWCC | 3 cut(s) | 275, 720, 1132 |
| BalI | TGGCCA | 1 cut(s) | 287 |
| BamHI | GGATCC | 1 cut(s) | 1220 |
| BanI | GGYRCC | 3 cut(s) | 890, 981, 1109 |
| BanII | GRGCYC | 1 cut(s) | 810 |
| Bbv12I | GWGCWC | 1 cut(s) | 1312 |
| BbvI | GCAGC | 4 cut(s) | 516, 528, 544, 1062 |
| BceAI | ACGGC | 1 cut(s) | 616 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 331, 365 |
| BciT130I | CCWGG | 2 cut(s) | 456, 1076 |
| BclI | TGATCA | 3 cut(s) | 88, 636, 687 |
| BcnI | CCSGG | 1 cut(s) | 1272 |
| BcoDI | GTCTC | 1 cut(s) | 687 |
| BcuI | ACTAGT | 1 cut(s) | 551 |
| BfaI | CTAG | 3 cut(s) | 59, 552, 1339 |
| BfmI | CTRYAG | 1 cut(s) | 530 |
| BfoI | RGCGCY | 2 cut(s) | 606, 1113 |
| BisI | GCNGC | 5 cut(s) | 530, 533, 542, 1048, 1051 |
| BlsI | GCNGC | 5 cut(s) | 531, 534, 543, 1049, 1052 |
| Bme1390I | CCNGG | 3 cut(s) | 456, 1076, 1272 |
| Bme18I | GGWCC | 3 cut(s) | 275, 720, 1132 |
| BmgBI | CACGTC | 1 cut(s) | 877 |
| BmgT120I | GGNCC | 6 cut(s) | 275, 330, 401, 488, 720, 1132 |
| BmrFI | CCNGG | 3 cut(s) | 456, 1076, 1272 |
| BmrI | ACTGGG | 2 cut(s) | 337, 1171 |
| BmsI | GCATC | 4 cut(s) | 292, 750, 963, 1248 |
| BmuI | ACTGGG | 2 cut(s) | 337, 1171 |
| BpmI | CTGGAG | 2 cut(s) | 331, 602 |
| Bpu10I | CCTNAGC | 1 cut(s) | 177 |
| BpuEI | CTTGAG | 2 cut(s) | 271, 894 |
| BpuMI | CCSGG | 1 cut(s) | 1272 |
| BsaHI | GRCGYC | 1 cut(s) | 1110 |
| BsaJI | CCNNGG | 5 cut(s) | 189, 364, 786, 977, 1075 |
| BsaWI | WCCGGW | 2 cut(s) | 1223, 1304 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 570, 600 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 455, 677, 768, 1106 |
| Bse118I | RCCGGY | 3 cut(s) | 386, 398, 984 |
| Bse1I | ACTGG | 5 cut(s) | 122, 332, 619, 1031, 1166 |
| Bse3DI | GCAATG | 1 cut(s) | 1089 |
| BseAI | TCCGGA | 1 cut(s) | 1223 |
| BseBI | CCWGG | 2 cut(s) | 456, 1076 |
| BseDI | CCNNGG | 5 cut(s) | 189, 364, 786, 977, 1075 |
| BseGI | GGATG | 3 cut(s) | 307, 808, 978 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 455, 677, 768, 1106 |
| BseMI | GCAATG | 1 cut(s) | 1089 |
| BseMII | CTCAG | 1 cut(s) | 168 |
| BseNI | ACTGG | 5 cut(s) | 122, 332, 619, 1031, 1166 |
| BseRI | GAGGAG | 3 cut(s) | 206, 748, 1086 |
| BseXI | GCAGC | 4 cut(s) | 516, 528, 544, 1062 |
| BseYI | CCCAGC | 1 cut(s) | 1240 |
| BsgI | GTGCAG | 1 cut(s) | 986 |
| Bsh1236I | CGCG | 1 cut(s) | 800 |
| BshFI | GGCC | 7 cut(s) | 152, 287, 332, 398, 402, 490, 938 |
| BshNI | GGYRCC | 3 cut(s) | 890, 981, 1109 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1312 |
| BsiSI | CCGG | 6 cut(s) | 387, 399, 985, 1224, 1271, 1305 |
| BslFI | GGGAC | 1 cut(s) | 1145 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 455, 677, 768, 1106 |
| BsmAI | GTCTC | 1 cut(s) | 687 |
| BsmFI | GGGAC | 1 cut(s) | 1145 |
| BsnI | GGCC | 7 cut(s) | 152, 287, 332, 398, 402, 490, 938 |
| Bsp1286I | GDGCHC | 2 cut(s) | 810, 1312 |
| Bsp13I | TCCGGA | 1 cut(s) | 1223 |
| Bsp143I | GATC | 9 cut(s) | 88, 172, 421, 498, 636, 687, 918, 1172, 1220 |
| Bsp19I | CCATGG | 1 cut(s) | 786 |
| BspACI | CCGC | 4 cut(s) | 340, 390, 800, 1047 |
| BspANI | GGCC | 7 cut(s) | 152, 287, 332, 398, 402, 490, 938 |
| BspCNI | CTCAG | 1 cut(s) | 169 |
| BspEI | TCCGGA | 1 cut(s) | 1223 |
| BspFNI | CGCG | 1 cut(s) | 800 |
| BspMAI | CTGCAG | 1 cut(s) | 534 |
| BspPI | GGATC | 5 cut(s) | 167, 416, 506, 1215, 1228 |
| BspT107I | GGYRCC | 3 cut(s) | 890, 981, 1109 |
| BsrDI | GCAATG | 1 cut(s) | 1089 |
| BsrFI | RCCGGY | 3 cut(s) | 386, 398, 984 |
| BsrI | ACTGG | 5 cut(s) | 122, 332, 619, 1031, 1166 |
| BssAI | RCCGGY | 3 cut(s) | 386, 398, 984 |
| BssECI | CCNNGG | 5 cut(s) | 189, 364, 786, 977, 1075 |
| BssMI | GATC | 9 cut(s) | 88, 172, 421, 498, 636, 687, 918, 1172, 1220 |
| BssNI | GRCGYC | 1 cut(s) | 1110 |
| BssT1I | CCWWGG | 3 cut(s) | 364, 786, 977 |
| Bst2UI | CCWGG | 2 cut(s) | 456, 1076 |
| Bst4CI | ACNGT | 2 cut(s) | 105, 934 |
| Bst6I | CTCTTC | 1 cut(s) | 38 |
| BstACI | GRCGYC | 1 cut(s) | 1110 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 541, 973, 1335 |
| BstDEI | CTNAG | 1 cut(s) | 177 |
| BstDSI | CCRYGG | 1 cut(s) | 786 |
| BstEII | GGTNACC | 1 cut(s) | 1120 |
| BstF5I | GGATG | 3 cut(s) | 307, 808, 978 |
| BstFNI | CGCG | 1 cut(s) | 800 |
| BstH2I | RGCGCY | 2 cut(s) | 606, 1113 |
| BstHHI | GCGC | 3 cut(s) | 605, 800, 1112 |
| BstKTI | GATC | 9 cut(s) | 91, 175, 424, 501, 639, 690, 921, 1175, 1223 |
| BstMAI | GTCTC | 1 cut(s) | 687 |
| BstMBI | GATC | 9 cut(s) | 88, 172, 421, 498, 636, 687, 918, 1172, 1220 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 137, 366, 538, 541, 973, 1267, 1326, 1335 |
| BstNI | CCWGG | 2 cut(s) | 456, 1076 |
| BstNSI | RCATGY | 1 cut(s) | 309 |
| BstPI | GGTNACC | 1 cut(s) | 1120 |
| BstSCI | CCNGG | 3 cut(s) | 454, 1074, 1270 |
| BstSFI | CTRYAG | 1 cut(s) | 530 |
| BstUI | CGCG | 1 cut(s) | 800 |
| BstV1I | GCAGC | 4 cut(s) | 516, 528, 544, 1062 |
| BstX2I | RGATCY | 2 cut(s) | 172, 1220 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 298 |
| BstYI | RGATCY | 2 cut(s) | 172, 1220 |
| BsuRI | GGCC | 7 cut(s) | 152, 287, 332, 398, 402, 490, 938 |
| BtgI | CCRYGG | 1 cut(s) | 786 |
| BtgZI | GCGATG | 1 cut(s) | 750 |
| BtrI | CACGTC | 1 cut(s) | 877 |
| BtsCI | GGATG | 3 cut(s) | 307, 808, 978 |
| BtsI | GCAGTG | 1 cut(s) | 480 |
| BtsIMutI | CAGTG | 2 cut(s) | 480, 1024 |
| CaiI | CAGNNNCTG | 1 cut(s) | 176 |
| CfoI | GCGC | 3 cut(s) | 605, 800, 1112 |
| Cfr10I | RCCGGY | 3 cut(s) | 386, 398, 984 |
| Cfr13I | GGNCC | 6 cut(s) | 275, 330, 401, 488, 720, 1132 |
| CseI | GACGC | 3 cut(s) | 349, 455, 824 |
| Csp6I | GTAC | 2 cut(s) | 101, 268 |
| CviQI | GTAC | 2 cut(s) | 101, 268 |
| DdeI | CTNAG | 1 cut(s) | 177 |
| DinI | GGCGCC | 1 cut(s) | 1111 |
| DpnI | GATC | 9 cut(s) | 90, 174, 423, 500, 638, 689, 920, 1174, 1222 |
| DpnII | GATC | 9 cut(s) | 88, 172, 421, 498, 636, 687, 918, 1172, 1220 |
| DraIII | CACNNNGTG | 1 cut(s) | 475 |
| EaeI | YGGCCR | 1 cut(s) | 285 |
| Eam1104I | CTCTTC | 1 cut(s) | 38 |
| EarI | CTCTTC | 1 cut(s) | 38 |
| EciI | GGCGGA | 1 cut(s) | 405 |
| Eco130I | CCWWGG | 3 cut(s) | 364, 786, 977 |
| Eco24I | GRGCYC | 1 cut(s) | 810 |
| Eco32I | GATATC | 1 cut(s) | 112 |
| Eco47I | GGWCC | 3 cut(s) | 275, 720, 1132 |
| Eco91I | GGTNACC | 1 cut(s) | 1120 |
| EcoO109I | RGGNCCY | 1 cut(s) | 488 |
| EcoO65I | GGTNACC | 1 cut(s) | 1120 |
| EcoRII | CCWGG | 2 cut(s) | 454, 1074 |
| EcoRV | GATATC | 1 cut(s) | 112 |
| EcoT14I | CCWWGG | 3 cut(s) | 364, 786, 977 |
| EcoT22I | ATGCAT | 2 cut(s) | 284, 307 |
| EcoT38I | GRGCYC | 1 cut(s) | 810 |
| EgeI | GGCGCC | 1 cut(s) | 1111 |
| EheI | GGCGCC | 1 cut(s) | 1111 |
| ErhI | CCWWGG | 3 cut(s) | 364, 786, 977 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 477, 509, 528, 560 |
| FaqI | GGGAC | 1 cut(s) | 1145 |
| FbaI | TGATCA | 3 cut(s) | 88, 636, 687 |
| FblI | GTMKAC | 1 cut(s) | 702 |
| Fnu4HI | GCNGC | 5 cut(s) | 530, 533, 542, 1048, 1051 |
| FokI | GGATG | 3 cut(s) | 314, 815, 985 |
| FriOI | GRGCYC | 1 cut(s) | 810 |
| FseI | GGCCGGCC | 1 cut(s) | 402 |
| Fsp4HI | GCNGC | 5 cut(s) | 530, 533, 542, 1048, 1051 |
| FspBI | CTAG | 3 cut(s) | 59, 552, 1339 |
| GlaI | GCGC | 3 cut(s) | 604, 799, 1111 |
| GluI | GCNGC | 5 cut(s) | 530, 533, 542, 1048, 1051 |
| GsaI | CCCAGC | 1 cut(s) | 1244 |
| GsuI | CTGGAG | 2 cut(s) | 331, 602 |
| HaeII | RGCGCY | 2 cut(s) | 606, 1113 |
| HaeIII | GGCC | 7 cut(s) | 152, 287, 332, 398, 402, 490, 938 |
| HapII | CCGG | 6 cut(s) | 387, 399, 985, 1224, 1271, 1305 |
| HgaI | GACGC | 3 cut(s) | 349, 455, 824 |
| HhaI | GCGC | 3 cut(s) | 605, 800, 1112 |
| Hin1I | GRCGYC | 1 cut(s) | 1110 |
| Hin6I | GCGC | 3 cut(s) | 603, 798, 1110 |
| HinP1I | GCGC | 3 cut(s) | 603, 798, 1110 |
| HincII | GTYRAC | 2 cut(s) | 589, 703 |
| HindII | GTYRAC | 2 cut(s) | 589, 703 |
| HinfI | GANTC | 3 cut(s) | 478, 695, 993 |
| HpaI | GTTAAC | 1 cut(s) | 589 |
| HpaII | CCGG | 6 cut(s) | 387, 399, 985, 1224, 1271, 1305 |
| HphI | GGTGA | 8 cut(s) | 178, 427, 532, 634, 832, 857, 1018, 1132 |
| Hpy166II | GTNNAC | 4 cut(s) | 445, 589, 703, 1009 |
| Hpy188I | TCNGA | 4 cut(s) | 430, 483, 692, 1177 |
| Hpy188III | TCNNGA | 6 cut(s) | 92, 176, 911, 1218, 1224, 1313 |
| Hpy8I | GTNNAC | 4 cut(s) | 445, 589, 703, 1009 |
| HpyAV | CCTTC | 4 cut(s) | 237, 659, 949, 1273 |
| HpyCH4III | ACNGT | 2 cut(s) | 105, 934 |
| HpyCH4IV | ACGT | 4 cut(s) | 585, 765, 780, 876 |
| HpyCH4V | TGCA | 7 cut(s) | 157, 282, 305, 509, 532, 925, 967 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 137, 366, 538, 541, 973, 1267, 1326, 1335 |
| HpyF3I | CTNAG | 1 cut(s) | 177 |
| HpySE526I | ACGT | 4 cut(s) | 585, 765, 780, 876 |
| Hsp92I | GRCGYC | 1 cut(s) | 1110 |
| HspAI | GCGC | 3 cut(s) | 603, 798, 1110 |
| KasI | GGCGCC | 1 cut(s) | 1109 |
| Kpn2I | TCCGGA | 1 cut(s) | 1223 |
| KroI | GCCGGC | 2 cut(s) | 398, 984 |
| KroNI | GCCGGC | 2 cut(s) | 400, 986 |
| Ksp22I | TGATCA | 3 cut(s) | 88, 636, 687 |
| KspAI | GTTAAC | 1 cut(s) | 589 |
| Kzo9I | GATC | 9 cut(s) | 88, 172, 421, 498, 636, 687, 918, 1172, 1220 |
| LmnI | GCTCC | 4 cut(s) | 578, 761, 1099, 1199 |
| Lsp1109I | GCAGC | 4 cut(s) | 516, 528, 544, 1062 |
| LweI | GCATC | 4 cut(s) | 292, 750, 963, 1248 |
| MaeI | CTAG | 3 cut(s) | 59, 552, 1339 |
| MaeII | ACGT | 4 cut(s) | 585, 765, 780, 876 |
| MaeIII | GTNAC | 8 cut(s) | 184, 317, 415, 467, 547, 554, 1079, 1120 |
| MalI | GATC | 9 cut(s) | 90, 174, 423, 500, 638, 689, 920, 1174, 1222 |
| MboI | GATC | 9 cut(s) | 88, 172, 421, 498, 636, 687, 918, 1172, 1220 |
| MboII | GAAGA | 6 cut(s) | 25, 28, 146, 640, 988, 1168 |
| MflI | RGATCY | 2 cut(s) | 172, 1220 |
| MhlI | GDGCHC | 2 cut(s) | 810, 1312 |
| MlsI | TGGCCA | 1 cut(s) | 287 |
| MluCI | AATT | 2 cut(s) | 9, 199 |
| MluNI | TGGCCA | 1 cut(s) | 287 |
| Mly113I | GGCGCC | 1 cut(s) | 1110 |
| MlyI | GAGTC | 1 cut(s) | 689 |
| MmeI | TCCRAC | 2 cut(s) | 786, 873 |
| Mox20I | TGGCCA | 1 cut(s) | 287 |
| Mph1103I | ATGCAT | 2 cut(s) | 284, 307 |
| MroI | TCCGGA | 1 cut(s) | 1223 |
| MroNI | GCCGGC | 2 cut(s) | 398, 984 |
| MscI | TGGCCA | 1 cut(s) | 287 |
| MseI | TTAA | 2 cut(s) | 12, 588 |
| MslI | CAYNNNNRTG | 1 cut(s) | 870 |
| Msp20I | TGGCCA | 1 cut(s) | 287 |
| MspI | CCGG | 6 cut(s) | 387, 399, 985, 1224, 1271, 1305 |
| MspR9I | CCNGG | 3 cut(s) | 456, 1076, 1272 |
| MvaI | CCWGG | 2 cut(s) | 456, 1076 |
| MvnI | CGCG | 1 cut(s) | 800 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 137, 366, 538, 541, 973, 1267, 1326, 1335 |
| NaeI | GCCGGC | 2 cut(s) | 400, 986 |
| NarI | GGCGCC | 1 cut(s) | 1110 |
| NciI | CCSGG | 1 cut(s) | 1272 |
| NcoI | CCATGG | 1 cut(s) | 786 |
| NdeII | GATC | 9 cut(s) | 88, 172, 421, 498, 636, 687, 918, 1172, 1220 |
| NgoMIV | GCCGGC | 2 cut(s) | 398, 984 |
| NmuCI | GTSAC | 7 cut(s) | 184, 317, 415, 467, 547, 554, 1120 |
| NsiI | ATGCAT | 2 cut(s) | 284, 307 |
| NspI | RCATGY | 1 cut(s) | 309 |
| PaeI | GCATGC | 1 cut(s) | 309 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 357 |
| PdiI | GCCGGC | 2 cut(s) | 400, 986 |
| PfeI | GAWTC | 2 cut(s) | 478, 993 |
| PflFI | GACNNNGTC | 2 cut(s) | 359, 698 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 455, 768 |
| PkrI | GCNGC | 5 cut(s) | 531, 534, 543, 1049, 1052 |
| PleI | GAGTC | 1 cut(s) | 689 |
| PluTI | GGCGCC | 1 cut(s) | 1113 |
| PpsI | GAGTC | 1 cut(s) | 689 |
| Psp1406I | AACGTT | 2 cut(s) | 585, 765 |
| Psp6I | CCWGG | 2 cut(s) | 454, 1074 |
| PspEI | GGTNACC | 1 cut(s) | 1120 |
| PspFI | CCCAGC | 1 cut(s) | 1240 |
| PspGI | CCWGG | 2 cut(s) | 454, 1074 |
| PspPI | GGNCC | 6 cut(s) | 275, 330, 401, 488, 720, 1132 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1001, 1033 |
| PstI | CTGCAG | 1 cut(s) | 534 |
| PstNI | CAGNNNCTG | 1 cut(s) | 176 |
| PsuI | RGATCY | 2 cut(s) | 172, 1220 |
| PsyI | GACNNNGTC | 2 cut(s) | 359, 698 |
| RigI | GGCCGGCC | 1 cut(s) | 402 |
| RsaI | GTAC | 2 cut(s) | 102, 269 |
| RsaNI | GTAC | 2 cut(s) | 101, 268 |
| RseI | CAYNNNNRTG | 1 cut(s) | 870 |
| SalI | GTCGAC | 1 cut(s) | 701 |
| SaqAI | TTAA | 2 cut(s) | 12, 588 |
| SatI | GCNGC | 5 cut(s) | 530, 533, 542, 1048, 1051 |
| Sau3AI | GATC | 9 cut(s) | 88, 172, 421, 498, 636, 687, 918, 1172, 1220 |
| Sau96I | GGNCC | 6 cut(s) | 275, 330, 401, 488, 720, 1132 |
| SchI | GAGTC | 1 cut(s) | 689 |
| ScrFI | CCNGG | 3 cut(s) | 456, 1076, 1272 |
| SduI | GDGCHC | 2 cut(s) | 810, 1312 |
| SfaNI | GCATC | 4 cut(s) | 292, 750, 963, 1248 |
| SfcI | CTRYAG | 1 cut(s) | 530 |
| SfoI | GGCGCC | 1 cut(s) | 1111 |
| SgrAI | CRCCGGYG | 1 cut(s) | 386 |
| SinI | GGWCC | 3 cut(s) | 275, 720, 1132 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 870 |
| SmlI | CTYRAG | 2 cut(s) | 250, 909 |
| SmoI | CTYRAG | 2 cut(s) | 250, 909 |
| SpeI | ACTAGT | 1 cut(s) | 551 |
| SphI | GCATGC | 1 cut(s) | 309 |
| Sse9I | AATT | 2 cut(s) | 9, 199 |
| SsiI | CCGC | 4 cut(s) | 340, 390, 800, 1047 |
| SspDI | GGCGCC | 1 cut(s) | 1109 |
| SspMI | CTAG | 3 cut(s) | 59, 552, 1339 |
| StyD4I | CCNGG | 3 cut(s) | 454, 1074, 1270 |
| StyI | CCWWGG | 3 cut(s) | 364, 786, 977 |
| TaaI | ACNGT | 2 cut(s) | 105, 934 |
| TaiI | ACGT | 4 cut(s) | 588, 768, 783, 879 |
| TaqI | TCGA | 1 cut(s) | 702 |
| TasI | AATT | 2 cut(s) | 9, 199 |
| TatI | WGTACW | 2 cut(s) | 100, 267 |
| TauI | GCSGC | 1 cut(s) | 1050 |
| TfiI | GAWTC | 2 cut(s) | 478, 993 |
| Tru1I | TTAA | 2 cut(s) | 12, 588 |
| Tru9I | TTAA | 2 cut(s) | 12, 588 |
| TscAI | CASTG | 2 cut(s) | 480, 1031 |
| TseFI | GTSAC | 7 cut(s) | 184, 317, 415, 467, 547, 554, 1120 |
| TseI | GCWGC | 4 cut(s) | 529, 532, 541, 1050 |
| Tsp45I | GTSAC | 7 cut(s) | 184, 317, 415, 467, 547, 554, 1120 |
| TspDTI | ATGAA | 4 cut(s) | 239, 1070, 1078, 1208 |
| TspGWI | ACGGA | 1 cut(s) | 1005 |
| TspRI | CASTG | 2 cut(s) | 480, 1031 |
| Tth111I | GACNNNGTC | 2 cut(s) | 359, 698 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 455, 768 |
| VpaK11BI | GGWCC | 3 cut(s) | 275, 720, 1132 |
| XceI | RCATGY | 1 cut(s) | 309 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 295 |
| XmiI | GTMKAC | 1 cut(s) | 702 |
| XspI | CTAG | 3 cut(s) | 59, 552, 1339 |
| Zsp2I | ATGCAT | 2 cut(s) | 284, 307 |