Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0003884

Physical Location & Seq

Genomic Coordinates Reverse (-)

50152474 .. 50157360

Gene Structure 4887 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0326600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1779 bp

ATGGGTTCATTTCGAGCACCAGTGGGGAGAAGCTCTGCACTTCCTGAAGCATCATGTGGATATTTGCTTCAAGAACTACAGATGATTTGGAATGAAATTGGACAAGATCAGTTGGAAAGGGAGAAGGTACTGGTGGATTTAGAGCAGGAATGCCTGGAGGTCTATAGGAGGAAGGTTGATGCTGCTAATACCTCAAGAGCTCGCCTGCACCAGGAGTTGGCAGAAGCTGAGGCTGAATTTACTCATCTTCTTTTGTCACTTGGCGAACGGTCTCTCCCCGGACGGCCAGAAAAAATGGTGGGAACACTGAAAGAGCAGCTAGATTCGATCACGCCAGCTCTGCGAGACATGAGATTGAGGAAAGAAGATAGGGTGAACAAGTTCCGAGCTGTACAAGGGCAAATTCAGAAGATCTCTGCAGAAATAGCAGGACAGTCAGAGTATGAGAACTCATCATCAGATGTCAGGGTGAATGAGAATGATCTTTCCTTGAAGAAACTAGAGGAGTACCAGACGGAGCTACAAAGACTCCACAATGACAGGAATGAAAGGCTCAAGCGGGTGGAGAAATATATAAACTCCATCCAAAAGTTGTCTTCAATATTAGGAACAGACTCCTCTATGATCATCACCAAGGTTCACCCAAGCTTGAATGAGTTATGTGGGATAGCCAAGAACATAAGCAACAGTATTTTGGCTAAACTCAACAGCACAGTGGAATCCCTAGAGGAAGAAAAGCAAAAGCGGCTTGAAAAGCTTCACGATCTTGGTAAAGCATTGAAAAACTTATGGAATCTCATGGATACACCATATAAAGATCGTCAATTGTTTTCCCATGTTACCGGCTTATTATCAGTCTCATCAGCAGAAGTATCAGATCCAGGAAGCCTAACCCAAAAGATAATCCAGCAGGCTGAGGCTGAAGTCAAGAGACTGGATCAATTAAAAGTAAGCAAGATGAAAGAACTATTTCTCAAGAAACAGAATGAGCTCAAGGAGATATGCAAAAAATCACACATGGAGATTCCTGTGCAAGCAAAGATGGATAATATAATTAACCTCATGAAATCTGGGGAAATTGACCATGCAGATCTTGTTATGAGCATGGATCAACAGATATCAAGAGCAGAAGATGAAGCTTGTAGCAGAAAGACAATTATGGAAAAGGTGGAAAAGTGGATCCTAGCACGTGATGAGGAGCGCTGGTTGGAAGAATATGGAAGAGACGAAAACCGATACTCAGTCAGAAGAGGTGCACACAAGAACCTGAGACGTGCAGAACGTGCTCGAGTATTAGTTAGCAAAATTCCAGCTTTGGTGGATTTACTGATAGAAAACACTAGGAGTTGGGAAGAAGAAAGAAAGAAGACTTTCTTATATGATGAGGTACCTCTCCTAGCAATGTTGGAAGAGTATATTGTGTTAAGGCAGGAAAAGGAGGGGGAGAGGCAAAGACAAAGGGAAGTGAAGTTCCAAGGCCTAATAGGGCAACATCAGCCAGAAAATTTGTTCCTGCCCAGTCCAAGCAGCAGTCCTACGCGAATTTCAAACAGAAGTGTAAATGGAGGCTTTAGCACTGCTATGCCTCTAAACAGAAGACTTTCTCTGGGCCTTCAGAAACTGGGACCAAACAGCATAGATTTAGGCACTCAAGGCATATCAAAGGAAGGTAAGAAGGCACAGAGACAAAAGATGTTTGCAAGACCTGGTCTTGTTTCTCCTGCTAGAGATGAAACAGCTTCAGTGGTATCAACATTTTCTGGCCCACTGTCTCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0006109 GO:0006110 GO:0006140 GO:0006355 GO:0006629 GO:0006638 GO:0006639 GO:0006641 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009743 GO:0009744 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009987 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0019219 GO:0019220 GO:0019222 GO:0019432 GO:0030808 GO:0030811 GO:0031323 GO:0031326 GO:0031329 GO:0034285 GO:0042221 GO:0042325 GO:0043467 GO:0043470 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0045017 GO:0046460 GO:0046463 GO:0046486 GO:0048518 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051193 GO:0051196 GO:0051252 GO:0060255 GO:0062012 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1900371 GO:1900542 GO:1901363 GO:1901576 GO:1901700 GO:1901957 GO:1901959 GO:1903506 GO:1903578 GO:2000112 GO:2001141 GO:2001169

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

592

Amino Acids

67.56

Weight (kDa)

8.66

Isoelectric Point (pI)

53.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MAP65_ASE1	PF03999	22 - 489	3.8e-72	Microtubule associated protein (MAP65/ASE1 family)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003884)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27000 AT2G02730 AT2G02730 AT2G02730
fragaria_vesca	FvH4_1g20311 FvH4_1g20311 FvH4_1g20311 FvH4_1g20311 FvH4_4g31870
malus_domestica	MD05G1007200.v1.1 MD13G1078200.v1.1 MD16G1077900.v1.1
prunus_persica	Prupe.1G268900_v2.0.a1
pyrus_communis	pycom13g06780 pycom13g06790 pycom16g06730
rosa_chinensis	RchiOBHm_Chr4g0440531
rosa_laevigata	RLG00000006171
rosa_multiflora	Rmu_sc0016635.1_g000001 Rmu_sc0037701.1_g000002
rosa_roxburghii	Rroxscaffold_5G00381360
rosa_rugosa	Rorug04G0326500 Rorug04G0326600
rosa_samantha	Rh1AG290600 Rh2AG297000 Rh4AG378200 Rh4BG390800 Rh4CG405500 Rh4DG384500
rosa_wichuraiana	Rw0G013060 Rw2G026030 Rw4G032370 Rw4G032470 Rw7G024050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1387
AccB1I	GGYRCC	1 cut(s)	1387
AccB7I	CCANNNNNTGG	1 cut(s)	217
AccII	CGCG	1 cut(s)	1540
AciI	CCGC	2 cut(s)	559, 745
AclWI	GGATC	5 cut(s)	872, 945, 1116, 1174, 1187
AcoI	YGGCCR	1 cut(s)	284
AcsI	RAATTY	5 cut(s)	236, 402, 1305, 1504, 1542
AcuI	CTGAAG	4 cut(s)	66, 942, 1598, 1725
AcvI	CACGTG	1 cut(s)	1190
AfaI	GTAC	4 cut(s)	129, 393, 509, 1389
AfeI	AGCGCT	1 cut(s)	1202
AfiI	CCNNNNNNNGG	2 cut(s)	211, 217
AgsI	TTSAA	7 cut(s)	71, 493, 600, 652, 752, 781, 1548
AjiI	CACGTC	1 cut(s)	1274
AjnI	CCWGG	4 cut(s)	153, 210, 880, 1705
AloI	GAACNNNNNNTCC	4 cut(s)	258, 290, 1454, 1486
Alw21I	GWGCWC	5 cut(s)	19, 202, 993, 1258, 1288
Alw26I	GTCTC	7 cut(s)	276, 339, 862, 925, 1218, 1264, 1678
Alw44I	GTGCAC	1 cut(s)	1254
AlwI	GGATC	5 cut(s)	872, 945, 1116, 1174, 1187
AlwNI	CAGNNNCTG	2 cut(s)	227, 1621
Ama87I	CYCGRG	1 cut(s)	1287
Aor51HI	AGCGCT	1 cut(s)	1202
AoxI	GGCC	4 cut(s)	284, 1477, 1609, 1762
ApaLI	GTGCAC	1 cut(s)	1254
ApeKI	GCWGC	3 cut(s)	182, 316, 1527
ApoI	RAATTY	5 cut(s)	236, 402, 1305, 1504, 1542
Asp700I	GAANNNNTTC	5 cut(s)	380, 756, 969, 1370, 1600
Asp718I	GGTACC	1 cut(s)	1387
AspLEI	GCGC	1 cut(s)	1203
AspS9I	GGNCC	3 cut(s)	1609, 1625, 1763
AsuC2I	CCSGG	1 cut(s)	279
AsuHPI	GGTGA	4 cut(s)	385, 481, 622, 632
AvaI	CYCGRG	1 cut(s)	1287
AvaII	GGWCC	1 cut(s)	1625
BaeGI	GKGCMC	1 cut(s)	1258
BamHI	GGATCC	1 cut(s)	1179
BanI	GGYRCC	1 cut(s)	1387
BanII	GRGCYC	2 cut(s)	202, 993
BbrPI	CACGTG	1 cut(s)	1190
BbsI	GAAGAC	3 cut(s)	588, 1373, 1603
Bbv12I	GWGCWC	5 cut(s)	19, 202, 993, 1258, 1288
BbvCI	CCTCAGC	2 cut(s)	228, 915
BbvI	GCAGC	3 cut(s)	169, 328, 1539
BccI	CCATC	2 cut(s)	590, 1036
BceAI	ACGGC	1 cut(s)	299
BciT130I	CCWGG	4 cut(s)	155, 212, 882, 1707
BciVI	GTATCC	1 cut(s)	796
BclI	TGATCA	1 cut(s)	624
BcnI	CCSGG	1 cut(s)	279
BcoDI	GTCTC	7 cut(s)	276, 339, 862, 925, 1218, 1264, 1678
BfaI	CTAG	7 cut(s)	320, 500, 725, 1184, 1341, 1397, 1725
BfmI	CTRYAG	3 cut(s)	77, 163, 417
BfoI	RGCGCY	1 cut(s)	1204
BfuI	GTATCC	1 cut(s)	796
BglII	AGATCT	2 cut(s)	411, 1090
BisI	GCNGC	4 cut(s)	183, 317, 746, 1528
BlsI	GCNGC	4 cut(s)	184, 318, 747, 1529
Bme1390I	CCNGG	5 cut(s)	155, 212, 279, 882, 1707
Bme18I	GGWCC	1 cut(s)	1625
BmeT110I	CYCGRG	1 cut(s)	1287
BmgBI	CACGTC	1 cut(s)	1274
BmgT120I	GGNCC	3 cut(s)	1609, 1625, 1763
BmiI	GGNNCC	3 cut(s)	1181, 1389, 1626
BmrFI	CCNGG	5 cut(s)	155, 212, 279, 882, 1707
BmrI	ACTGGG	2 cut(s)	1512, 1631
BmsI	GCATC	2 cut(s)	59, 169
BmuI	ACTGGG	2 cut(s)	1512, 1631
BpiI	GAAGAC	3 cut(s)	588, 1373, 1603
BpmI	CTGGAG	1 cut(s)	176
Bpu10I	CCTNAGC	2 cut(s)	228, 915
BpuEI	CTTGAG	5 cut(s)	178, 539, 959, 977, 1635
BpuMI	CCSGG	1 cut(s)	279
BsaAI	YACGTR	1 cut(s)	1190
BsaI	GGTCTC	1 cut(s)	276
BsaJI	CCNNGG	3 cut(s)	277, 633, 1474
BsaXI	ACNNNNNCTCC	6 cut(s)	258, 288, 513, 543, 1190, 1220
Bsc4I	CCNNNNNNNGG	2 cut(s)	211, 217
Bse118I	RCCGGY	1 cut(s)	842
Bse1I	ACTGG	5 cut(s)	20, 135, 939, 1518, 1626
Bse3DI	GCAATG	1 cut(s)	1407
BseBI	CCWGG	4 cut(s)	155, 212, 882, 1707
BseDI	CCNNGG	3 cut(s)	277, 633, 1474
BseGI	GGATG	1 cut(s)	582
BseLI	CCNNNNNNNGG	2 cut(s)	211, 217
BseMI	GCAATG	1 cut(s)	1407
BseMII	CTCAG	4 cut(s)	219, 906, 1254, 1259
BseNI	ACTGG	5 cut(s)	20, 135, 939, 1518, 1626
BseRI	GAGGAG	3 cut(s)	518, 607, 1211
BseSI	GKGCMC	1 cut(s)	1258
BseXI	GCAGC	3 cut(s)	169, 328, 1539
BsgI	GTGCAG	3 cut(s)	21, 191, 1296
Bsh1236I	CGCG	1 cut(s)	1540
BshFI	GGCC	4 cut(s)	286, 1479, 1611, 1764
BshNI	GGYRCC	1 cut(s)	1387
BsiHKAI	GWGCWC	5 cut(s)	19, 202, 993, 1258, 1288
BsiHKCI	CYCGRG	1 cut(s)	1287
BsiSI	CCGG	2 cut(s)	279, 843
BslFI	GGGAC	1 cut(s)	1638
BslI	CCNNNNNNNGG	2 cut(s)	211, 217
BsmAI	GTCTC	7 cut(s)	276, 339, 862, 925, 1218, 1264, 1678
BsmBI	CGTCTC	2 cut(s)	1218, 1264
BsmFI	GGGAC	1 cut(s)	1638
BsmI	GAATGC	1 cut(s)	155
BsnI	GGCC	4 cut(s)	286, 1479, 1611, 1764
Bso31I	GGTCTC	1 cut(s)	276
BsoBI	CYCGRG	1 cut(s)	1287
Bsp1286I	GDGCHC	5 cut(s)	19, 202, 993, 1258, 1288
Bsp1407I	TGTACA	1 cut(s)	391
BspACI	CCGC	2 cut(s)	559, 745
BspANI	GGCC	4 cut(s)	286, 1479, 1611, 1764
BspCNI	CTCAG	4 cut(s)	220, 907, 1253, 1260
BspFNI	CGCG	1 cut(s)	1540
BspHI	TCATGA	1 cut(s)	1062
BspLI	GGNNCC	3 cut(s)	1181, 1389, 1626
BspMAI	CTGCAG	1 cut(s)	421
BspPI	GGATC	5 cut(s)	872, 945, 1116, 1174, 1187
BspT107I	GGYRCC	1 cut(s)	1387
BspTNI	GGTCTC	1 cut(s)	276
BsrDI	GCAATG	1 cut(s)	1407
BsrFI	RCCGGY	1 cut(s)	842
BsrGI	TGTACA	1 cut(s)	391
BsrI	ACTGG	5 cut(s)	20, 135, 939, 1518, 1626
BssAI	RCCGGY	1 cut(s)	842
BssECI	CCNNGG	3 cut(s)	277, 633, 1474
BssT1I	CCWWGG	2 cut(s)	633, 1474
Bst2UI	CCWGG	4 cut(s)	155, 212, 882, 1707
Bst4CI	ACNGT	5 cut(s)	270, 435, 689, 715, 1770
Bst6I	CTCTTC	3 cut(s)	1216, 1243, 1404
BstAPI	GCANNNNNTGC	1 cut(s)	1283
BstAUI	TGTACA	1 cut(s)	391
BstBAI	YACGTR	1 cut(s)	1190
BstC8I	GCNNGC	5 cut(s)	202, 206, 336, 912, 1035
BstDEI	CTNAG	4 cut(s)	228, 915, 1240, 1268
BstENI	CCTNNNNNAGG	1 cut(s)	209
BstF5I	GGATG	1 cut(s)	582
BstFNI	CGCG	1 cut(s)	1540
BstH2I	RGCGCY	1 cut(s)	1204
BstHHI	GCGC	1 cut(s)	1203
BstMAI	GTCTC	7 cut(s)	276, 339, 862, 925, 1218, 1264, 1678
BstMWI	GCNNNNNNNGC	7 cut(s)	340, 425, 745, 754, 1283, 1495, 1653
BstNI	CCWGG	4 cut(s)	155, 212, 882, 1707
BstSCI	CCNGG	5 cut(s)	153, 210, 277, 880, 1705
BstSFI	CTRYAG	3 cut(s)	77, 163, 417
BstSLI	GKGCMC	1 cut(s)	1258
BstUI	CGCG	1 cut(s)	1540
BstV1I	GCAGC	3 cut(s)	169, 328, 1539
BstV2I	GAAGAC	3 cut(s)	588, 1373, 1603
BstX2I	RGATCY	4 cut(s)	411, 877, 1090, 1179
BstYI	RGATCY	4 cut(s)	411, 877, 1090, 1179
BsuI	GTATCC	1 cut(s)	796
BsuRI	GGCC	4 cut(s)	286, 1479, 1611, 1764
BtrI	CACGTC	1 cut(s)	1274
BtsCI	GGATG	1 cut(s)	582
BtsI	GCAGTG	1 cut(s)	1575
BtsIMutI	CAGTG	6 cut(s)	27, 305, 720, 1575, 1749, 1766
Cac8I	GCNNGC	5 cut(s)	202, 206, 336, 912, 1035
CaiI	CAGNNNCTG	2 cut(s)	227, 1621
CciI	TCATGA	1 cut(s)	1062
CfoI	GCGC	1 cut(s)	1203
Cfr10I	RCCGGY	1 cut(s)	842
Cfr13I	GGNCC	3 cut(s)	1609, 1625, 1763
CsiI	ACCWGGT	1 cut(s)	1705
Csp6I	GTAC	4 cut(s)	128, 392, 508, 1388
CviAII	CATG	8 cut(s)	54, 349, 799, 836, 1018, 1063, 1085, 1105
CviQI	GTAC	4 cut(s)	128, 392, 508, 1388
DdeI	CTNAG	4 cut(s)	228, 915, 1240, 1268
EaeI	YGGCCR	1 cut(s)	284
Eam1104I	CTCTTC	3 cut(s)	1216, 1243, 1404
EarI	CTCTTC	3 cut(s)	1216, 1243, 1404
Ecl136II	GAGCTC	2 cut(s)	200, 991
Eco130I	CCWWGG	2 cut(s)	633, 1474
Eco147I	AGGCCT	1 cut(s)	1479
Eco24I	GRGCYC	2 cut(s)	202, 993
Eco31I	GGTCTC	1 cut(s)	276
Eco32I	GATATC	1 cut(s)	1119
Eco47I	GGWCC	1 cut(s)	1625
Eco47III	AGCGCT	1 cut(s)	1202
Eco53kI	GAGCTC	2 cut(s)	200, 991
Eco57I	CTGAAG	4 cut(s)	66, 942, 1598, 1725
Eco72I	CACGTG	1 cut(s)	1190
Eco88I	CYCGRG	1 cut(s)	1287
EcoICRI	GAGCTC	2 cut(s)	200, 991
EcoNI	CCTNNNNNAGG	1 cut(s)	209
EcoRII	CCWGG	4 cut(s)	153, 210, 880, 1705
EcoRV	GATATC	1 cut(s)	1119
EcoT14I	CCWWGG	2 cut(s)	633, 1474
EcoT38I	GRGCYC	2 cut(s)	202, 993
ErhI	CCWWGG	2 cut(s)	633, 1474
Esp3I	CGTCTC	2 cut(s)	1218, 1264
FaeI	CATG	8 cut(s)	57, 352, 802, 839, 1021, 1066, 1088, 1108
FalI	AAGNNNNNCTT	2 cut(s)	1358, 1390
FaqI	GGGAC	1 cut(s)	1638
FatI	CATG	8 cut(s)	53, 348, 798, 835, 1017, 1062, 1084, 1104
FauI	CCCGC	1 cut(s)	552
FbaI	TGATCA	1 cut(s)	624
Fnu4HI	GCNGC	4 cut(s)	183, 317, 746, 1528
FokI	GGATG	1 cut(s)	569
FriOI	GRGCYC	2 cut(s)	202, 993
Fsp4HI	GCNGC	4 cut(s)	183, 317, 746, 1528
FspBI	CTAG	7 cut(s)	320, 500, 725, 1184, 1341, 1397, 1725
GlaI	GCGC	1 cut(s)	1202
GluI	GCNGC	4 cut(s)	183, 317, 746, 1528
GsuI	CTGGAG	1 cut(s)	176
HaeII	RGCGCY	1 cut(s)	1204
HaeIII	GGCC	4 cut(s)	286, 1479, 1611, 1764
HapII	CCGG	2 cut(s)	279, 843
HhaI	GCGC	1 cut(s)	1203
Hin1II	CATG	8 cut(s)	57, 352, 802, 839, 1021, 1066, 1088, 1108
Hin6I	GCGC	1 cut(s)	1201
HinP1I	GCGC	1 cut(s)	1201
HindIII	AAGCTT	3 cut(s)	646, 755, 1137
HinfI	GANTC	6 cut(s)	323, 528, 614, 719, 793, 1024
HpaII	CCGG	2 cut(s)	279, 843
HphI	GGTGA	4 cut(s)	385, 481, 622, 632
Hpy166II	GTNNAC	3 cut(s)	376, 640, 1256
Hpy188I	TCNGA	7 cut(s)	386, 408, 439, 460, 877, 1247, 1617
Hpy188III	TCNNGA	8 cut(s)	44, 71, 195, 761, 928, 976, 1063, 1122
Hpy8I	GTNNAC	3 cut(s)	376, 640, 1256
HpyAV	CCTTC	5 cut(s)	118, 166, 1622, 1661, 1669
HpyCH4III	ACNGT	5 cut(s)	270, 435, 689, 715, 1770
HpyCH4IV	ACGT	3 cut(s)	1189, 1273, 1282
HpyCH4V	TGCA	9 cut(s)	38, 208, 419, 1005, 1033, 1088, 1256, 1277, 1700
HpyF10VI	GCNNNNNNNGC	7 cut(s)	340, 425, 745, 754, 1283, 1495, 1653
HpyF3I	CTNAG	4 cut(s)	228, 915, 1240, 1268
HpySE526I	ACGT	3 cut(s)	1189, 1273, 1282
Hsp92II	CATG	8 cut(s)	57, 352, 802, 839, 1021, 1066, 1088, 1108
HspAI	GCGC	1 cut(s)	1201
KpnI	GGTACC	1 cut(s)	1391
Ksp22I	TGATCA	1 cut(s)	624
LmnI	GCTCC	2 cut(s)	517, 1198
Lsp1109I	GCAGC	3 cut(s)	169, 328, 1539
LweI	GCATC	2 cut(s)	59, 169
MabI	ACCWGGT	1 cut(s)	1705
MaeI	CTAG	7 cut(s)	320, 500, 725, 1184, 1341, 1397, 1725
MaeII	ACGT	3 cut(s)	1189, 1273, 1282
MaeIII	GTNAC	2 cut(s)	255, 838
MfeI	CAATTG	1 cut(s)	824
MflI	RGATCY	4 cut(s)	411, 877, 1090, 1179
MhlI	GDGCHC	5 cut(s)	19, 202, 993, 1258, 1288
MlyI	GAGTC	2 cut(s)	522, 608
MmeI	TCCRAC	3 cut(s)	93, 1188, 1386
MroXI	GAANNNNTTC	5 cut(s)	380, 756, 969, 1370, 1600
MseI	TTAA	3 cut(s)	944, 1056, 1424
MslI	CAYNNNNRTG	1 cut(s)	1580
MspI	CCGG	2 cut(s)	279, 843
MspR9I	CCNGG	5 cut(s)	155, 212, 279, 882, 1707
MunI	CAATTG	1 cut(s)	824
Mva1269I	GAATGC	1 cut(s)	155
MvaI	CCWGG	4 cut(s)	155, 212, 882, 1707
MvnI	CGCG	1 cut(s)	1540
MwoI	GCNNNNNNNGC	7 cut(s)	340, 425, 745, 754, 1283, 1495, 1653
NciI	CCSGG	1 cut(s)	279
NlaIII	CATG	8 cut(s)	57, 352, 802, 839, 1021, 1066, 1088, 1108
NlaIV	GGNNCC	3 cut(s)	1181, 1389, 1626
NmuCI	GTSAC	1 cut(s)	255
PaeR7I	CTCGAG	1 cut(s)	1287
PagI	TCATGA	1 cut(s)	1062
PceI	AGGCCT	1 cut(s)	1479
PcsI	WCGNNNNNNNCGW	1 cut(s)	1279
PctI	GAATGC	1 cut(s)	155
PdmI	GAANNNNTTC	5 cut(s)	380, 756, 969, 1370, 1600
PfeI	GAWTC	4 cut(s)	323, 719, 793, 1024
PflFI	GACNNNGTC	1 cut(s)	1707
PflMI	CCANNNNNTGG	1 cut(s)	217
PfoI	TCCNGGA	1 cut(s)	880
PkrI	GCNGC	4 cut(s)	184, 318, 747, 1529
PleI	GAGTC	2 cut(s)	522, 608
PmaCI	CACGTG	1 cut(s)	1190
PmlI	CACGTG	1 cut(s)	1190
PpsI	GAGTC	2 cut(s)	522, 608
Ppu21I	YACGTR	1 cut(s)	1190
Psp124BI	GAGCTC	2 cut(s)	202, 993
Psp6I	CCWGG	4 cut(s)	153, 210, 880, 1705
PspCI	CACGTG	1 cut(s)	1190
PspGI	CCWGG	4 cut(s)	153, 210, 880, 1705
PspN4I	GGNNCC	3 cut(s)	1181, 1389, 1626
PspPI	GGNCC	3 cut(s)	1609, 1625, 1763
PspXI	VCTCGAGB	1 cut(s)	1287
PstI	CTGCAG	1 cut(s)	421
PstNI	CAGNNNCTG	2 cut(s)	227, 1621
PsuI	RGATCY	4 cut(s)	411, 877, 1090, 1179
PsyI	GACNNNGTC	1 cut(s)	1707
RsaI	GTAC	4 cut(s)	129, 393, 509, 1389
RsaNI	GTAC	4 cut(s)	128, 392, 508, 1388
RseI	CAYNNNNRTG	1 cut(s)	1580
SacI	GAGCTC	2 cut(s)	202, 993
SaqAI	TTAA	3 cut(s)	944, 1056, 1424
SatI	GCNGC	4 cut(s)	183, 317, 746, 1528
Sau96I	GGNCC	3 cut(s)	1609, 1625, 1763
SchI	GAGTC	2 cut(s)	522, 608
ScrFI	CCNGG	5 cut(s)	155, 212, 279, 882, 1707
SduI	GDGCHC	5 cut(s)	19, 202, 993, 1258, 1288
SexAI	ACCWGGT	1 cut(s)	1705
SfaNI	GCATC	2 cut(s)	59, 169
SfcI	CTRYAG	3 cut(s)	77, 163, 417
Sfr274I	CTCGAG	1 cut(s)	1287
SinI	GGWCC	1 cut(s)	1625
SlaI	CTCGAG	1 cut(s)	1287
SmiMI	CAYNNNNRTG	1 cut(s)	1580
SmlI	CTYRAG	6 cut(s)	193, 554, 974, 992, 1287, 1650
SmoI	CTYRAG	6 cut(s)	193, 554, 974, 992, 1287, 1650
SseBI	AGGCCT	1 cut(s)	1479
SsiI	CCGC	2 cut(s)	559, 745
SspI	AATATT	1 cut(s)	603
SspMI	CTAG	7 cut(s)	320, 500, 725, 1184, 1341, 1397, 1725
SstI	GAGCTC	2 cut(s)	202, 993
StuI	AGGCCT	1 cut(s)	1479
StyD4I	CCNGG	5 cut(s)	153, 210, 277, 880, 1705
StyI	CCWWGG	2 cut(s)	633, 1474
TaaI	ACNGT	5 cut(s)	270, 435, 689, 715, 1770
TaiI	ACGT	3 cut(s)	1192, 1276, 1285
TaqI	TCGA	3 cut(s)	13, 326, 1288
TatI	WGTACW	1 cut(s)	391
TauI	GCSGC	1 cut(s)	748
TfiI	GAWTC	4 cut(s)	323, 719, 793, 1024
Tru1I	TTAA	3 cut(s)	944, 1056, 1424
Tru9I	TTAA	3 cut(s)	944, 1056, 1424
TscAI	CASTG	6 cut(s)	27, 312, 720, 1582, 1749, 1773
TseFI	GTSAC	1 cut(s)	255
TseI	GCWGC	3 cut(s)	182, 316, 1527
Tsp45I	GTSAC	1 cut(s)	255
TspDTI	ATGAA	6 cut(s)	108, 561, 974, 1079, 1149, 1746
TspGWI	ACGGA	1 cut(s)	530
TspRI	CASTG	6 cut(s)	27, 312, 720, 1582, 1749, 1773
Tth111I	GACNNNGTC	1 cut(s)	1707
Van91I	CCANNNNNTGG	1 cut(s)	217
VneI	GTGCAC	1 cut(s)	1254
VpaK11BI	GGWCC	1 cut(s)	1625
XagI	CCTNNNNNAGG	1 cut(s)	209
XapI	RAATTY	5 cut(s)	236, 402, 1305, 1504, 1542
XhoI	CTCGAG	1 cut(s)	1287
XmnI	GAANNNNTTC	5 cut(s)	380, 756, 969, 1370, 1600
XspI	CTAG	7 cut(s)	320, 500, 725, 1184, 1341, 1397, 1725

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.