FvH4_1g20311

Protein of unknown function (DUF1664)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
12543257 .. 12546235
2979 bp
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UTR
Exon/CDS
Intron
FvH4_1g20311.t4

Sequence Viewer

Length: 393 bp
ATGCTACCTGAATGCTTGAAGGTTGCTGGGGTGCAATATTCTCTGACTGAAATGGACTTTACCTTGAGTCAACTGCAGAGCTTGGTTTCTGGTCTGGATTGGAAGATATGTTCTCTTGAAGACAAGCAGGATTTCGTAAATATGGGTGTTGCTTATCTCTGCAACTTTGTAAGCGGGAAAAAAGTTGAAATGCCTGGAGCTTTGCAGAAGCAACTGAAACTTTCTGATAATGCACGGAACGGCCGATTGCTCTCATATTCAGAACCAAGCATGATGGGGCTTACAGAAATTGCGGATTCTTTGTCTGCCCATTTGAGTACTGATGGTATCGTGCAAGATGATATTGCCAAGTTAGAGCAGCCTCCAAAGAAGGAAACAGAAACAATTCTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

131

Amino Acids

14.33

Weight (kDa)

4.69

Isoelectric Point (pI)

44.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 174, 293
AcoI YGGCCR 1 cut(s) 241
AfaI GTAC 1 cut(s) 319
AgsI TTSAA 3 cut(s) 19, 119, 188
AjnI CCWGG 1 cut(s) 193
AloI GAACNNNNNNTCC 2 cut(s) 94, 126
AluBI AGCT 2 cut(s) 81, 200
AluI AGCT 2 cut(s) 81, 200
AoxI GGCC 1 cut(s) 241
ApeKI GCWGC 1 cut(s) 358
Asp700I GAANNNNTTC 1 cut(s) 384
BbsI GAAGAC 1 cut(s) 126
BbvI GCAGC 1 cut(s) 370
BccI CCATC 2 cut(s) 268, 317
BceAI ACGGC 1 cut(s) 256
BciT130I CCWGG 1 cut(s) 195
BfmI CTRYAG 2 cut(s) 74, 389
BisI GCNGC 1 cut(s) 359
BlsI GCNGC 1 cut(s) 360
BmcAI AGTACT 1 cut(s) 319
Bme1390I CCNGG 1 cut(s) 195
BmrFI CCNGG 1 cut(s) 195
BpiI GAAGAC 1 cut(s) 126
BpmI CTGGAG 1 cut(s) 216
BpuEI CTTGAG 1 cut(s) 85
BseBI CCWGG 1 cut(s) 195
BseX3I CGGCCG 1 cut(s) 241
BseXI GCAGC 1 cut(s) 370
BseYI CCCAGC 1 cut(s) 26
Bsh1285I CGRYCG 1 cut(s) 244
BshFI GGCC 1 cut(s) 243
BsiEI CGRYCG 1 cut(s) 244
BsmI GAATGC 1 cut(s) 17
BsnI GGCC 1 cut(s) 243
BspACI CCGC 2 cut(s) 174, 293
BspANI GGCC 1 cut(s) 243
BspMAI CTGCAG 1 cut(s) 78
Bst2UI CCWGG 1 cut(s) 195
BstMCI CGRYCG 1 cut(s) 244
BstNI CCWGG 1 cut(s) 195
BstSCI CCNGG 1 cut(s) 193
BstSFI CTRYAG 2 cut(s) 74, 389
BstV1I GCAGC 1 cut(s) 370
BstV2I GAAGAC 1 cut(s) 126
BstZI CGGCCG 1 cut(s) 241
BsuRI GGCC 1 cut(s) 243
Csp6I GTAC 1 cut(s) 318
CviAII CATG 1 cut(s) 271
CviJI RGCY 5 cut(s) 81, 200, 243, 280, 361
CviKI_1 RGCY 5 cut(s) 81, 200, 243, 280, 361
CviQI GTAC 1 cut(s) 318
EaeI YGGCCR 1 cut(s) 241
EagI CGGCCG 1 cut(s) 241
EclXI CGGCCG 1 cut(s) 241
Eco52I CGGCCG 1 cut(s) 241
EcoRII CCWGG 1 cut(s) 193
FaeI CATG 1 cut(s) 274
FaiI YATR 4 cut(s) 109, 143, 256, 272
FatI CATG 1 cut(s) 270
FauI CCCGC 1 cut(s) 167
Fnu4HI GCNGC 1 cut(s) 359
Fsp4HI GCNGC 1 cut(s) 359
GluI GCNGC 1 cut(s) 359
GsaI CCCAGC 1 cut(s) 30
GsuI CTGGAG 1 cut(s) 216
HaeIII GGCC 1 cut(s) 243
Hin1II CATG 1 cut(s) 274
HincII GTYRAC 1 cut(s) 71
HindII GTYRAC 1 cut(s) 71
HinfI GANTC 2 cut(s) 67, 296
Hpy166II GTNNAC 1 cut(s) 71
Hpy188I TCNGA 3 cut(s) 45, 226, 262
Hpy188III TCNNGA 2 cut(s) 95, 116
Hpy8I GTNNAC 1 cut(s) 71
HpyAV CCTTC 2 cut(s) 13, 364
HpyCH4V TGCA 6 cut(s) 34, 76, 162, 205, 233, 334
Hsp92II CATG 1 cut(s) 274
LmnI GCTCC 1 cut(s) 197
LpnPI CCDG 7 cut(s) 12, 21, 75, 80, 113, 180, 207
Lsp1109I GCAGC 1 cut(s) 370
MboII GAAGA 2 cut(s) 115, 131
MluCI AATT 2 cut(s) 288, 384
MlyI GAGTC 1 cut(s) 76
MnlI CCTC 1 cut(s) 372
MroXI GAANNNNTTC 1 cut(s) 384
MspR9I CCNGG 1 cut(s) 195
Mva1269I GAATGC 1 cut(s) 17
MvaI CCWGG 1 cut(s) 195
NlaIII CATG 1 cut(s) 274
PcsI WCGNNNNNNNCGW 1 cut(s) 241
PctI GAATGC 1 cut(s) 17
PdmI GAANNNNTTC 1 cut(s) 384
PfeI GAWTC 1 cut(s) 296
PkrI GCNGC 1 cut(s) 360
PleI GAGTC 1 cut(s) 75
PpsI GAGTC 1 cut(s) 75
Psp6I CCWGG 1 cut(s) 193
PspFI CCCAGC 1 cut(s) 26
PspGI CCWGG 1 cut(s) 193
PstI CTGCAG 1 cut(s) 78
RsaI GTAC 1 cut(s) 319
RsaNI GTAC 1 cut(s) 318
SatI GCNGC 1 cut(s) 359
ScaI AGTACT 1 cut(s) 319
SchI GAGTC 1 cut(s) 76
ScrFI CCNGG 1 cut(s) 195
SetI ASST 5 cut(s) 10, 24, 65, 83, 202
SfcI CTRYAG 2 cut(s) 74, 389
SmlI CTYRAG 1 cut(s) 64
SmoI CTYRAG 1 cut(s) 64
Sse9I AATT 2 cut(s) 288, 384
SsiI CCGC 2 cut(s) 174, 293
SspI AATATT 1 cut(s) 38
StyD4I CCNGG 1 cut(s) 193
TasI AATT 2 cut(s) 288, 384
TatI WGTACW 1 cut(s) 317
TfiI GAWTC 1 cut(s) 296
TseI GCWGC 1 cut(s) 358
TspGWI ACGGA 1 cut(s) 250
XmnI GAANNNNTTC 1 cut(s) 384
ZrmI AGTACT 1 cut(s) 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.