Rw2G026030

Protein of unknown function (DUF1664)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0003884
Physical Location & Seq
Reverse (-)
39903534 .. 39904954
1421 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G026030.1

Sequence Viewer

Length: 363 bp
ATGGGTCGTCTACGCGGGCTACATATAATATATAATCCGACTCATTTAATAAACGGGTTACATGGGTTCACTTCGTGTTGGTTGGATTGGAAGATATGTTCTCTTGAAGAAAAGCAGGATTTCGCAAATATGGGTGTTGCTTACCTTTGCAACTTTGTTGGTGGGAAAAAAGTTGAAATGCCTGGAGCTCTGCAGAAGCAACTTAAAAACTCTGATAATGCACGGGGTGGCCGATTACTCTCATATTCAGAACCAAGCATAATGATCTGCTGCTTGATTGTACTTGATGTTACTTTCTTATGGGGACTTAAAGAAATTGCAGATACTGTGTCTGCCCGTTTGAACAGTGAAGGTAGAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1664

Protein Analysis

120

Amino Acids

13.35

Weight (kDa)

8.32

Isoelectric Point (pI)

34.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 10
AccII CGCG 1 cut(s) 15
AciI CCGC 1 cut(s) 15
AcoI YGGCCR 1 cut(s) 229
AdeI CACNNNGTG 2 cut(s) 75, 227
AfaI GTAC 1 cut(s) 282
AgsI TTSAA 3 cut(s) 107, 176, 343
AjnI CCWGG 1 cut(s) 181
AloI GAACNNNNNNTCC 2 cut(s) 82, 114
AluBI AGCT 1 cut(s) 188
AluI AGCT 1 cut(s) 188
Alw21I GWGCWC 1 cut(s) 190
AlwNI CAGNNNCTG 1 cut(s) 326
AoxI GGCC 1 cut(s) 229
ApeKI GCWGC 1 cut(s) 270
BanII GRGCYC 1 cut(s) 190
Bbv12I GWGCWC 1 cut(s) 190
BbvI GCAGC 1 cut(s) 257
BciT130I CCWGG 1 cut(s) 183
BfmI CTRYAG 1 cut(s) 191
BisI GCNGC 1 cut(s) 271
BlsI GCNGC 1 cut(s) 272
Bme1390I CCNGG 1 cut(s) 183
BmrFI CCNGG 1 cut(s) 183
BpmI CTGGAG 1 cut(s) 204
BseBI CCWGG 1 cut(s) 183
BseXI GCAGC 1 cut(s) 257
Bsh1236I CGCG 1 cut(s) 15
BshFI GGCC 1 cut(s) 231
BsiHKAI GWGCWC 1 cut(s) 190
BslFI GGGAC 1 cut(s) 318
BsmFI GGGAC 1 cut(s) 318
BsnI GGCC 1 cut(s) 231
Bsp1286I GDGCHC 1 cut(s) 190
Bsp143I GATC 1 cut(s) 264
BspACI CCGC 1 cut(s) 15
BspANI GGCC 1 cut(s) 231
BspFNI CGCG 1 cut(s) 15
BspMAI CTGCAG 1 cut(s) 195
BssMI GATC 1 cut(s) 264
Bst2UI CCWGG 1 cut(s) 183
Bst4CI ACNGT 2 cut(s) 328, 347
BstC8I GCNNGC 1 cut(s) 17
BstFNI CGCG 1 cut(s) 15
BstKTI GATC 1 cut(s) 267
BstMBI GATC 1 cut(s) 264
BstNI CCWGG 1 cut(s) 183
BstSCI CCNGG 1 cut(s) 181
BstSFI CTRYAG 1 cut(s) 191
BstUI CGCG 1 cut(s) 15
BstV1I GCAGC 1 cut(s) 257
BsuRI GGCC 1 cut(s) 231
BtsIMutI CAGTG 1 cut(s) 352
Cac8I GCNNGC 1 cut(s) 17
CaiI CAGNNNCTG 1 cut(s) 326
Csp6I GTAC 1 cut(s) 281
CviAII CATG 1 cut(s) 62
CviJI RGCY 3 cut(s) 19, 188, 231
CviKI_1 RGCY 3 cut(s) 19, 188, 231
CviQI GTAC 1 cut(s) 281
DpnI GATC 1 cut(s) 266
DpnII GATC 1 cut(s) 264
DraIII CACNNNGTG 2 cut(s) 75, 227
EaeI YGGCCR 1 cut(s) 229
Ecl136II GAGCTC 1 cut(s) 188
Eco24I GRGCYC 1 cut(s) 190
Eco53kI GAGCTC 1 cut(s) 188
EcoICRI GAGCTC 1 cut(s) 188
EcoRII CCWGG 1 cut(s) 181
EcoT38I GRGCYC 1 cut(s) 190
FaeI CATG 1 cut(s) 65
FaqI GGGAC 1 cut(s) 318
FatI CATG 1 cut(s) 61
FauI CCCGC 1 cut(s) 8
FblI GTMKAC 1 cut(s) 10
Fnu4HI GCNGC 1 cut(s) 271
FriOI GRGCYC 1 cut(s) 190
Fsp4HI GCNGC 1 cut(s) 271
GluI GCNGC 1 cut(s) 271
GsuI CTGGAG 1 cut(s) 204
HaeIII GGCC 1 cut(s) 231
Hin1II CATG 1 cut(s) 65
HinfI GANTC 1 cut(s) 40
Hpy166II GTNNAC 2 cut(s) 11, 69
Hpy188I TCNGA 3 cut(s) 39, 214, 250
Hpy188III TCNNGA 1 cut(s) 104
Hpy8I GTNNAC 2 cut(s) 11, 69
HpyAV CCTTC 1 cut(s) 344
HpyCH4III ACNGT 2 cut(s) 328, 347
HpyCH4V TGCA 4 cut(s) 150, 193, 221, 320
Hsp92II CATG 1 cut(s) 65
Kzo9I GATC 1 cut(s) 264
LmnI GCTCC 1 cut(s) 185
LpnPI CCDG 3 cut(s) 101, 168, 195
Lsp1109I GCAGC 1 cut(s) 257
MaeIII GTNAC 2 cut(s) 57, 289
MalI GATC 1 cut(s) 266
MboI GATC 1 cut(s) 264
MboII GAAGA 2 cut(s) 103, 119
MhlI GDGCHC 1 cut(s) 190
MluCI AATT 1 cut(s) 315
MlyI GAGTC 1 cut(s) 34
MmeI TCCRAC 2 cut(s) 62, 63
MnlI CCTC 1 cut(s) 350
MseI TTAA 3 cut(s) 47, 204, 309
MspR9I CCNGG 1 cut(s) 183
MvaI CCWGG 1 cut(s) 183
MvnI CGCG 1 cut(s) 15
NdeII GATC 1 cut(s) 264
NlaIII CATG 1 cut(s) 65
PcsI WCGNNNNNNNCGW 1 cut(s) 229
PkrI GCNGC 1 cut(s) 272
PleI GAGTC 1 cut(s) 34
PpsI GAGTC 1 cut(s) 34
Psp124BI GAGCTC 1 cut(s) 190
Psp6I CCWGG 1 cut(s) 181
PspGI CCWGG 1 cut(s) 181
PstI CTGCAG 1 cut(s) 195
PstNI CAGNNNCTG 1 cut(s) 326
RsaI GTAC 1 cut(s) 282
RsaNI GTAC 1 cut(s) 281
SacI GAGCTC 1 cut(s) 190
SaqAI TTAA 3 cut(s) 47, 204, 309
SatI GCNGC 1 cut(s) 271
Sau3AI GATC 1 cut(s) 264
SchI GAGTC 1 cut(s) 34
ScrFI CCNGG 1 cut(s) 183
SduI GDGCHC 1 cut(s) 190
SetI ASST 3 cut(s) 147, 190, 355
SfcI CTRYAG 1 cut(s) 191
Sse9I AATT 1 cut(s) 315
SsiI CCGC 1 cut(s) 15
SstI GAGCTC 1 cut(s) 190
StyD4I CCNGG 1 cut(s) 181
TaaI ACNGT 2 cut(s) 328, 347
TasI AATT 1 cut(s) 315
TatI WGTACW 1 cut(s) 280
Tru1I TTAA 3 cut(s) 47, 204, 309
Tru9I TTAA 3 cut(s) 47, 204, 309
TscAI CASTG 1 cut(s) 352
TseI GCWGC 1 cut(s) 270
TspRI CASTG 1 cut(s) 352
XmiI GTMKAC 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.