Rw0G013060

Protein of unknown function (DUF1664)

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00582
Physical Location & Seq
Forward (+)
14930 .. 15710
781 bp
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UTR
Exon/CDS
Intron
Rw0G013060.1

Sequence Viewer

Length: 234 bp
ATGGGTGTTGCTTACCTTTGCAACTTTGTTGGTGGGAAAAAAGTTAAAATGCCTGGAGCTCTGCAGAAGCAACTTAAAAACTCTGATAATGCACGGGGTGGCCGATTACTCTCATATTCAGAACCAAGCATAATGATCTATTGCTTGATTGTACTTGATGTTACTTTCTTATGGGGACTTAAAGAAATTGCAGATACTGTGACTGTCCATTTGAACAGTGAAGGTAGAGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

77

Amino Acids

8.42

Weight (kDa)

9.06

Isoelectric Point (pI)

31.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 100
AdeI CACNNNGTG 1 cut(s) 98
AfaI GTAC 1 cut(s) 153
AgsI TTSAA 1 cut(s) 214
AjnI CCWGG 1 cut(s) 52
AluBI AGCT 1 cut(s) 59
AluI AGCT 1 cut(s) 59
Alw21I GWGCWC 1 cut(s) 61
AlwNI CAGNNNCTG 1 cut(s) 197
AoxI GGCC 1 cut(s) 100
ArsI GACNNNNNNTTYG 2 cut(s) 193, 225
BanII GRGCYC 1 cut(s) 61
Bbv12I GWGCWC 1 cut(s) 61
BciT130I CCWGG 1 cut(s) 54
BfmI CTRYAG 1 cut(s) 62
Bme1390I CCNGG 1 cut(s) 54
BmrFI CCNGG 1 cut(s) 54
BpmI CTGGAG 1 cut(s) 75
BseBI CCWGG 1 cut(s) 54
BshFI GGCC 1 cut(s) 102
BsiHKAI GWGCWC 1 cut(s) 61
BslFI GGGAC 1 cut(s) 189
BsmFI GGGAC 1 cut(s) 189
BsnI GGCC 1 cut(s) 102
Bsp1286I GDGCHC 1 cut(s) 61
Bsp143I GATC 1 cut(s) 135
BspANI GGCC 1 cut(s) 102
BspMAI CTGCAG 1 cut(s) 66
BssMI GATC 1 cut(s) 135
Bst2UI CCWGG 1 cut(s) 54
Bst4CI ACNGT 3 cut(s) 199, 205, 218
BstKTI GATC 1 cut(s) 138
BstMBI GATC 1 cut(s) 135
BstNI CCWGG 1 cut(s) 54
BstSCI CCNGG 1 cut(s) 52
BstSFI CTRYAG 1 cut(s) 62
BsuRI GGCC 1 cut(s) 102
BtsIMutI CAGTG 1 cut(s) 223
CaiI CAGNNNCTG 1 cut(s) 197
Csp6I GTAC 1 cut(s) 152
CviJI RGCY 2 cut(s) 59, 102
CviKI_1 RGCY 2 cut(s) 59, 102
CviQI GTAC 1 cut(s) 152
DpnI GATC 1 cut(s) 137
DpnII GATC 1 cut(s) 135
DraIII CACNNNGTG 1 cut(s) 98
EaeI YGGCCR 1 cut(s) 100
Ecl136II GAGCTC 1 cut(s) 59
Eco24I GRGCYC 1 cut(s) 61
Eco53kI GAGCTC 1 cut(s) 59
EcoICRI GAGCTC 1 cut(s) 59
EcoRII CCWGG 1 cut(s) 52
EcoT38I GRGCYC 1 cut(s) 61
FaiI YATR 3 cut(s) 115, 131, 172
FaqI GGGAC 1 cut(s) 189
FriOI GRGCYC 1 cut(s) 61
GsuI CTGGAG 1 cut(s) 75
HaeIII GGCC 1 cut(s) 102
Hpy188I TCNGA 2 cut(s) 85, 121
HpyAV CCTTC 1 cut(s) 215
HpyCH4III ACNGT 3 cut(s) 199, 205, 218
HpyCH4V TGCA 4 cut(s) 21, 64, 92, 191
Kzo9I GATC 1 cut(s) 135
LmnI GCTCC 1 cut(s) 56
LpnPI CCDG 2 cut(s) 39, 66
MaeIII GTNAC 2 cut(s) 160, 199
MalI GATC 1 cut(s) 137
MboI GATC 1 cut(s) 135
MhlI GDGCHC 1 cut(s) 61
MluCI AATT 1 cut(s) 186
MnlI CCTC 1 cut(s) 221
MseI TTAA 3 cut(s) 45, 75, 180
MspR9I CCNGG 1 cut(s) 54
MvaI CCWGG 1 cut(s) 54
NdeII GATC 1 cut(s) 135
NmuCI GTSAC 1 cut(s) 199
PcsI WCGNNNNNNNCGW 1 cut(s) 100
Psp124BI GAGCTC 1 cut(s) 61
Psp6I CCWGG 1 cut(s) 52
PspGI CCWGG 1 cut(s) 52
PstI CTGCAG 1 cut(s) 66
PstNI CAGNNNCTG 1 cut(s) 197
RsaI GTAC 1 cut(s) 153
RsaNI GTAC 1 cut(s) 152
SacI GAGCTC 1 cut(s) 61
SaqAI TTAA 3 cut(s) 45, 75, 180
Sau3AI GATC 1 cut(s) 135
ScrFI CCNGG 1 cut(s) 54
SduI GDGCHC 1 cut(s) 61
SetI ASST 3 cut(s) 18, 61, 226
SfcI CTRYAG 1 cut(s) 62
SgeI CNNG 7 cut(s) 65, 66, 105, 107, 138, 157, 167
Sse9I AATT 1 cut(s) 186
SstI GAGCTC 1 cut(s) 61
StyD4I CCNGG 1 cut(s) 52
TaaI ACNGT 3 cut(s) 199, 205, 218
TasI AATT 1 cut(s) 186
TatI WGTACW 1 cut(s) 151
Tru1I TTAA 3 cut(s) 45, 75, 180
Tru9I TTAA 3 cut(s) 45, 75, 180
TscAI CASTG 1 cut(s) 223
TseFI GTSAC 1 cut(s) 199
Tsp45I GTSAC 1 cut(s) 199
TspRI CASTG 1 cut(s) 223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.