Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0011725

Physical Location & Seq

Genomic Coordinates Reverse (-)

30805826 .. 30808019

Gene Structure 2194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g31900.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1332 bp

ATGGTAGTCAATAGATCCGGTTCAATCTTTCTCGTCTTACTTTTGTTGTCGAGCGTCGCGGCAATCGTCAGCGGCCAAAATGATACTGTGGAATTAGAAGACGAGTACTGGAAACAAAGAGCAGCCGACGCCATGAGAATTGCCAATGCTTCTGTTCATCCCGATCCCGAGAACGTTACAGAGGAGTTCAATGCCAAAGTACACGAGCATATCATGGGGCAAAATAGGACGAGAAGGACCTTGAGAGGCTTCAAGAGATATGAAGGCCCCTGCAGGGCCACCAACCCAATCGACGCATGCTGGCGGTGCGACCCTGAATGGGCCGACAACCGCCAGAAACTCGTCGATTGCTCTATGGGTTTCGGAAAAAAGACTACCGGTGGCAAGGGTGGGCCGATTTACGTCGTCACTGATGGCTCAGATGACGATATCGTAAACCCTAAAGAAGGGACCCTCCGCTACGCGGTGACACGGAAACGTCCTCTCTGGATAATCTTTGCCCATAGCATGGTGATTAGGCTGCAACAGGAGCTAATGGTGACATGTGACAAGACCATCGATGGTAGAGGAGCCAACATTGTGATTGCCTATGGTGGTGGCATAACTCTCCAATATGTGAATAATGTCATCATTACCAACATTAAAGTTAAGGACATTCAGTCCTTACCAGGTGGTATGCTCAGGGACGCCGAAGACCATGTTGGTCTGAGGACCAGGAGCGATGGTGATGGCATCTCCCTCTTCAGCGCTTCCAACATCTGGATCGACCACGTTTCCATGGCGAGGACCGCCGACGGACTCATCGACTGCATCATGGGTTCTACCGCTGTGACCATCTCCAATGGCCACTTCACTGACCACAACGAGGCGATGTTGTTCGGGGCAAAAAATACCCACACCCAAGACAAGAACATGCAAATAACGCTCGCCTTCAACCACTTCGGGCAGGGATTGGTTCAGAGAATGCCAAGGTGCAGATTTGGATTCTTCCATGTTGTGAACAATGACTACACACAGTGGATAATGTATGCTATTGGTGGTAACATGAACCCTACCATCATCAGCCAGGGTAACAGGTTCATTGCTCCTGAAAGCCATGTCGCAAAAGAGGTGACCAAGAGGGAGTACACAGACGAATCGGAATGGAAGAACTGGAACTGGAGATCCGAGGGAGACGTGATGGAGAATGGAGCATTCTTCGTTGAGTCTGGCAACCCTAACTGTGCGAAATCAACGAACATAGAAATGATGCCGTTTAAGCCCGGGAAGTTGGCGCCGCAACTGACCAGCTTTGCCGGCGCTCTAGAGTGCTTTGTTGGCCGACCATGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0009664 GO:0009987 GO:0016043 GO:0016829 GO:0016835 GO:0016837 GO:0030570 GO:0045229 GO:0071554 GO:0071555 GO:0071669 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko00040 ko02024 map00040 map02024

Pfam Domains

Protein Families

Pec_lyase_C Pec_lyase_N

Protein Analysis

444

Amino Acids

49.37

Weight (kDa)

6.47

Isoelectric Point (pI)

31.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pec_lyase_N	PF04431	34 - 81	5.3e-15	Pectate lyase, N terminus
Pectate_lyase_4	PF00544	177 - 384	3.9e-21	Pectate lyase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011725)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14420 AT2G02720
fragaria_vesca	FvH4_4g31900
malus_domestica	MD13G1078400.v1.1 MD16G1078000.v1.1 MD16G1078100.v1.1
prunus_persica	Prupe.1G268500_v2.0.a1 Prupe.1G268700_v2.0.a1
pyrus_communis	pycom13g06810 pycom16g06740 pycom16g06760
rosa_chinensis	RchiOBHm_Chr4g0440551
rosa_rugosa	Rorug04G0326600
rosa_samantha	Rh4AG378300 Rh4BG391000 Rh4CG405700 Rh4DG384700
rosa_wichuraiana	Rw4G032390 Rw4G032490

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1273
AccB7I	CCANNNNNTGG	2 cut(s)	508, 759
AccII	CGCG	2 cut(s)	59, 464
AciI	CCGC	9 cut(s)	59, 72, 304, 331, 457, 464, 789, 825, 1277
AclI	AACGTT	1 cut(s)	174
AclWI	GGATC	4 cut(s)	9, 158, 770, 1158
AcoI	YGGCCR	3 cut(s)	73, 844, 1318
AcuI	CTGAAG	1 cut(s)	727
AcyI	GRCGYC	3 cut(s)	129, 687, 1274
AdeI	CACNNNGTG	1 cut(s)	1017
AfaI	GTAC	3 cut(s)	107, 201, 1127
AfeI	AGCGCT	1 cut(s)	748
AfiI	CCNNNNNNNGG	8 cut(s)	274, 319, 446, 463, 508, 759, 783, 865
AflIII	ACRYGT	1 cut(s)	542
AgeI	ACCGGT	1 cut(s)	377
AgsI	TTSAA	4 cut(s)	24, 190, 253, 934
AhdI	GACNNNNNGTC	1 cut(s)	658
AjiI	CACGTC	1 cut(s)	1177
AjnI	CCWGG	3 cut(s)	667, 713, 1065
AjuI	GAANNNNNNNTTGG	4 cut(s)	684, 716, 833, 865
AloI	GAACNNNNNNTCC	2 cut(s)	1148, 1180
AluBI	AGCT	2 cut(s)	532, 1290
AluI	AGCT	2 cut(s)	532, 1290
Alw26I	GTCTC	1 cut(s)	1167
AlwI	GGATC	4 cut(s)	9, 158, 770, 1158
Ama87I	CYCGRG	2 cut(s)	167, 1262
Aor51HI	AGCGCT	1 cut(s)	748
AoxI	GGCC	7 cut(s)	73, 265, 276, 321, 392, 844, 1318
ApeKI	GCWGC	2 cut(s)	122, 520
AsiGI	ACCGGT	1 cut(s)	377
AspLEI	GCGC	3 cut(s)	749, 1276, 1301
AspS9I	GGNCC	8 cut(s)	237, 266, 276, 321, 392, 450, 711, 786
AsuC2I	CCSGG	2 cut(s)	1263, 1264
AsuHPI	GGTGA	5 cut(s)	478, 523, 550, 737, 1123
AvaI	CYCGRG	2 cut(s)	167, 1262
AvaII	GGWCC	4 cut(s)	237, 450, 711, 786
BalI	TGGCCA	1 cut(s)	846
BanI	GGYRCC	1 cut(s)	1273
BauI	CACGAG	1 cut(s)	203
BbsI	GAAGAC	2 cut(s)	105, 699
BbvI	GCAGC	2 cut(s)	134, 507
BccI	CCATC	8 cut(s)	407, 554, 563, 716, 722, 842, 1064, 1174
BceAI	ACGGC	1 cut(s)	1237
BciT130I	CCWGG	3 cut(s)	669, 715, 1067
BcnI	CCSGG	2 cut(s)	1263, 1264
BcoDI	GTCTC	1 cut(s)	1167
BfaI	CTAG	2 cut(s)	1304, 1330
BfmI	CTRYAG	1 cut(s)	271
BfoI	RGCGCY	3 cut(s)	750, 1277, 1302
BisI	GCNGC	5 cut(s)	60, 73, 123, 521, 1277
BlsI	GCNGC	5 cut(s)	61, 74, 124, 522, 1278
BmcAI	AGTACT	1 cut(s)	107
Bme1390I	CCNGG	5 cut(s)	669, 715, 1067, 1263, 1264
Bme18I	GGWCC	4 cut(s)	237, 450, 711, 786
BmeRI	GACNNNNNGTC	1 cut(s)	658
BmeT110I	CYCGRG	2 cut(s)	167, 1262
BmgBI	CACGTC	1 cut(s)	1177
BmgT120I	GGNCC	8 cut(s)	237, 266, 276, 321, 392, 450, 711, 786
BmiI	GGNNCC	5 cut(s)	268, 451, 452, 571, 1275
BmrFI	CCNGG	5 cut(s)	669, 715, 1067, 1263, 1264
BmsI	GCATC	3 cut(s)	741, 819, 1239
BpiI	GAAGAC	2 cut(s)	105, 699
BpmI	CTGGAG	1 cut(s)	1180
Bpu10I	CCTNAGC	1 cut(s)	680
BpuEI	CTTGAG	1 cut(s)	262
BpuMI	CCSGG	2 cut(s)	1263, 1264
Bsa29I	ATCGAT	1 cut(s)	558
BsaHI	GRCGYC	3 cut(s)	129, 687, 1274
BsaJI	CCNNGG	5 cut(s)	777, 968, 1066, 1167, 1262
BsaWI	WCCGGW	2 cut(s)	17, 377
BsaXI	ACNNNNNCTCC	2 cut(s)	709, 739
Bsc4I	CCNNNNNNNGG	8 cut(s)	274, 319, 446, 463, 508, 759, 783, 865
Bse118I	RCCGGY	2 cut(s)	377, 1295
Bse1I	ACTGG	3 cut(s)	113, 1157, 1163
Bse3DI	GCAATG	1 cut(s)	1080
BseBI	CCWGG	3 cut(s)	669, 715, 1067
BseCI	ATCGAT	1 cut(s)	558
BseDI	CCNNGG	5 cut(s)	777, 968, 1066, 1167, 1262
BseGI	GGATG	1 cut(s)	157
BseLI	CCNNNNNNNGG	8 cut(s)	274, 319, 446, 463, 508, 759, 783, 865
BseMI	GCAATG	1 cut(s)	1080
BseMII	CTCAG	3 cut(s)	432, 694, 698
BseNI	ACTGG	3 cut(s)	113, 1157, 1163
BseRI	GAGGAG	2 cut(s)	197, 582
BseXI	GCAGC	2 cut(s)	134, 507
BsgI	GTGCAG	1 cut(s)	994
Bsh1236I	CGCG	2 cut(s)	59, 464
BshFI	GGCC	7 cut(s)	75, 267, 278, 323, 394, 846, 1320
BshNI	GGYRCC	1 cut(s)	1273
BshTI	ACCGGT	1 cut(s)	377
BshVI	ATCGAT	1 cut(s)	558
BsiHKCI	CYCGRG	2 cut(s)	167, 1262
BsiSI	CCGG	4 cut(s)	18, 378, 1263, 1296
BslFI	GGGAC	2 cut(s)	463, 698
BslI	CCNNNNNNNGG	8 cut(s)	274, 319, 446, 463, 508, 759, 783, 865
BsmAI	GTCTC	1 cut(s)	1167
BsmBI	CGTCTC	1 cut(s)	1167
BsmFI	GGGAC	2 cut(s)	463, 698
BsmI	GAATGC	2 cut(s)	969, 1193
BsnI	GGCC	7 cut(s)	75, 267, 278, 323, 394, 846, 1320
BsoBI	CYCGRG	2 cut(s)	167, 1262
Bsp143I	GATC	4 cut(s)	14, 163, 762, 1163
Bsp19I	CCATGG	1 cut(s)	777
BspACI	CCGC	9 cut(s)	59, 72, 304, 331, 457, 464, 789, 825, 1277
BspANI	GGCC	7 cut(s)	75, 267, 278, 323, 394, 846, 1320
BspCNI	CTCAG	3 cut(s)	431, 693, 699
BspDI	ATCGAT	1 cut(s)	558
BspFNI	CGCG	2 cut(s)	59, 464
BspLI	GGNNCC	5 cut(s)	268, 451, 452, 571, 1275
BspMAI	CTGCAG	1 cut(s)	275
BspPI	GGATC	4 cut(s)	9, 158, 770, 1158
BspT107I	GGYRCC	1 cut(s)	1273
BsrDI	GCAATG	1 cut(s)	1080
BsrFI	RCCGGY	2 cut(s)	377, 1295
BsrI	ACTGG	3 cut(s)	113, 1157, 1163
BssAI	RCCGGY	2 cut(s)	377, 1295
BssECI	CCNNGG	5 cut(s)	777, 968, 1066, 1167, 1262
BssMI	GATC	4 cut(s)	14, 163, 762, 1163
BssNI	GRCGYC	3 cut(s)	129, 687, 1274
BssSI	CACGAG	1 cut(s)	203
BssT1I	CCWWGG	2 cut(s)	777, 968
Bst2BI	CACGAG	1 cut(s)	203
Bst2UI	CCWGG	3 cut(s)	669, 715, 1067
Bst4CI	ACNGT	3 cut(s)	88, 1017, 1223
Bst6I	CTCTTC	1 cut(s)	746
BstACI	GRCGYC	3 cut(s)	129, 687, 1274
BstC8I	GCNNGC	4 cut(s)	298, 302, 927, 1297
BstDEI	CTNAG	3 cut(s)	418, 680, 707
BstDSI	CCRYGG	1 cut(s)	777
BstEII	GGTNACC	1 cut(s)	1111
BstENI	CCTNNNNNAGG	1 cut(s)	444
BstF5I	GGATG	1 cut(s)	157
BstFNI	CGCG	2 cut(s)	59, 464
BstH2I	RGCGCY	3 cut(s)	750, 1277, 1302
BstHHI	GCGC	3 cut(s)	749, 1276, 1301
BstKTI	GATC	4 cut(s)	17, 166, 765, 1166
BstMAI	GTCTC	1 cut(s)	1167
BstMBI	GATC	4 cut(s)	14, 163, 762, 1163
BstMWI	GCNNNNNNNGC	9 cut(s)	128, 306, 529, 788, 922, 1258, 1296, 1317, 1326
BstNI	CCWGG	3 cut(s)	669, 715, 1067
BstNSI	RCATGY	3 cut(s)	300, 546, 916
BstPI	GGTNACC	1 cut(s)	1111
BstSCI	CCNGG	5 cut(s)	667, 713, 1065, 1261, 1262
BstSFI	CTRYAG	1 cut(s)	271
BstUI	CGCG	2 cut(s)	59, 464
BstV1I	GCAGC	2 cut(s)	134, 507
BstV2I	GAAGAC	2 cut(s)	105, 699
BstX2I	RGATCY	2 cut(s)	14, 1163
BstYI	RGATCY	2 cut(s)	14, 1163
Bsu15I	ATCGAT	1 cut(s)	558
BsuRI	GGCC	7 cut(s)	75, 267, 278, 323, 394, 846, 1320
BsuTUI	ATCGAT	1 cut(s)	558
BtgI	CCRYGG	1 cut(s)	777
BtgZI	GCGATG	2 cut(s)	735, 884
BtrI	CACGTC	1 cut(s)	1177
BtsCI	GGATG	1 cut(s)	157
BtsIMutI	CAGTG	3 cut(s)	408, 852, 1022
Cac8I	GCNNGC	4 cut(s)	298, 302, 927, 1297
CfoI	GCGC	3 cut(s)	749, 1276, 1301
Cfr10I	RCCGGY	2 cut(s)	377, 1295
Cfr13I	GGNCC	8 cut(s)	237, 266, 276, 321, 392, 450, 711, 786
Cfr9I	CCCGGG	1 cut(s)	1262
ClaI	ATCGAT	1 cut(s)	558
CseI	GACGC	4 cut(s)	43, 137, 302, 695
CsiI	ACCWGGT	1 cut(s)	667
Csp6I	GTAC	3 cut(s)	106, 200, 1126
CspAI	ACCGGT	1 cut(s)	377
CviQI	GTAC	3 cut(s)	106, 200, 1126
DdeI	CTNAG	3 cut(s)	418, 680, 707
DinI	GGCGCC	1 cut(s)	1275
DpnI	GATC	4 cut(s)	16, 165, 764, 1165
DpnII	GATC	4 cut(s)	14, 163, 762, 1163
DraIII	CACNNNGTG	1 cut(s)	1017
DriI	GACNNNNNGTC	1 cut(s)	658
EaeI	YGGCCR	3 cut(s)	73, 844, 1318
Eam1104I	CTCTTC	1 cut(s)	746
Eam1105I	GACNNNNNGTC	1 cut(s)	658
EarI	CTCTTC	1 cut(s)	746
Eco130I	CCWWGG	2 cut(s)	777, 968
Eco32I	GATATC	1 cut(s)	430
Eco47I	GGWCC	4 cut(s)	237, 450, 711, 786
Eco47III	AGCGCT	1 cut(s)	748
Eco57I	CTGAAG	1 cut(s)	727
Eco88I	CYCGRG	2 cut(s)	167, 1262
Eco91I	GGTNACC	1 cut(s)	1111
EcoNI	CCTNNNNNAGG	1 cut(s)	444
EcoO109I	RGGNCCY	3 cut(s)	237, 266, 450
EcoO65I	GGTNACC	1 cut(s)	1111
EcoRII	CCWGG	3 cut(s)	667, 713, 1065
EcoRV	GATATC	1 cut(s)	430
EcoT14I	CCWWGG	2 cut(s)	777, 968
EgeI	GGCGCC	1 cut(s)	1275
EheI	GGCGCC	1 cut(s)	1275
ErhI	CCWWGG	2 cut(s)	777, 968
Esp3I	CGTCTC	1 cut(s)	1167
FaqI	GGGAC	2 cut(s)	463, 698
Fnu4HI	GCNGC	5 cut(s)	60, 73, 123, 521, 1277
FokI	GGATG	1 cut(s)	144
Fsp4HI	GCNGC	5 cut(s)	60, 73, 123, 521, 1277
FspBI	CTAG	2 cut(s)	1304, 1330
GlaI	GCGC	3 cut(s)	748, 1275, 1300
GluI	GCNGC	5 cut(s)	60, 73, 123, 521, 1277
GsuI	CTGGAG	1 cut(s)	1180
HaeII	RGCGCY	3 cut(s)	750, 1277, 1302
HaeIII	GGCC	7 cut(s)	75, 267, 278, 323, 394, 846, 1320
HapII	CCGG	4 cut(s)	18, 378, 1263, 1296
HgaI	GACGC	4 cut(s)	43, 137, 302, 695
HhaI	GCGC	3 cut(s)	749, 1276, 1301
Hin1I	GRCGYC	3 cut(s)	129, 687, 1274
Hin6I	GCGC	3 cut(s)	747, 1274, 1299
HinP1I	GCGC	3 cut(s)	747, 1274, 1299
HinfI	GANTC	4 cut(s)	798, 984, 1136, 1205
HpaII	CCGG	4 cut(s)	18, 378, 1263, 1296
HphI	GGTGA	5 cut(s)	478, 523, 550, 737, 1123
Hpy166II	GTNNAC	4 cut(s)	202, 436, 1000, 1128
Hpy188I	TCNGA	6 cut(s)	365, 421, 708, 960, 1141, 1168
Hpy188III	TCNNGA	7 cut(s)	161, 167, 253, 487, 760, 1088, 1304
Hpy8I	GTNNAC	4 cut(s)	202, 436, 1000, 1128
Hpy99I	CGWCG	6 cut(s)	59, 131, 296, 347, 407, 797
HpyAV	CCTTC	4 cut(s)	228, 257, 440, 940
HpyCH4III	ACNGT	3 cut(s)	88, 1017, 1223
HpyCH4IV	ACGT	5 cut(s)	174, 402, 478, 771, 1176
HpyCH4V	TGCA	5 cut(s)	273, 523, 810, 916, 975
HpyF10VI	GCNNNNNNNGC	9 cut(s)	128, 306, 529, 788, 922, 1258, 1296, 1317, 1326
HpyF3I	CTNAG	3 cut(s)	418, 680, 707
HpySE526I	ACGT	5 cut(s)	174, 402, 478, 771, 1176
Hsp92I	GRCGYC	3 cut(s)	129, 687, 1274
HspAI	GCGC	3 cut(s)	747, 1274, 1299
KasI	GGCGCC	1 cut(s)	1273
KflI	GGGWCCC	1 cut(s)	450
KroI	GCCGGC	1 cut(s)	1295
KroNI	GCCGGC	1 cut(s)	1297
Kzo9I	GATC	4 cut(s)	14, 163, 762, 1163
LmnI	GCTCC	5 cut(s)	529, 569, 717, 1090, 1190
Lsp1109I	GCAGC	2 cut(s)	134, 507
LweI	GCATC	3 cut(s)	741, 819, 1239
MabI	ACCWGGT	1 cut(s)	667
MaeI	CTAG	2 cut(s)	1304, 1330
MaeII	ACGT	5 cut(s)	174, 402, 478, 771, 1176
MaeIII	GTNAC	9 cut(s)	175, 406, 466, 538, 545, 829, 1040, 1070, 1111
MalI	GATC	4 cut(s)	16, 165, 764, 1165
MboI	GATC	4 cut(s)	14, 163, 762, 1163
MboII	GAAGA	6 cut(s)	110, 704, 733, 979, 1159, 1189
MflI	RGATCY	2 cut(s)	14, 1163
MlsI	TGGCCA	1 cut(s)	846
MluCI	AATT	2 cut(s)	92, 138
MluNI	TGGCCA	1 cut(s)	846
Mly113I	GGCGCC	1 cut(s)	1274
MlyI	GAGTC	2 cut(s)	792, 1214
MmeI	TCCRAC	1 cut(s)	777
Mox20I	TGGCCA	1 cut(s)	846
MroNI	GCCGGC	1 cut(s)	1295
MscI	TGGCCA	1 cut(s)	846
MseI	TTAA	3 cut(s)	642, 648, 1257
MslI	CAYNNNNRTG	1 cut(s)	1244
Msp20I	TGGCCA	1 cut(s)	846
MspA1I	CMGCKG	2 cut(s)	72, 827
MspI	CCGG	4 cut(s)	18, 378, 1263, 1296
MspR9I	CCNGG	5 cut(s)	669, 715, 1067, 1263, 1264
Mva1269I	GAATGC	2 cut(s)	969, 1193
MvaI	CCWGG	3 cut(s)	669, 715, 1067
MvnI	CGCG	2 cut(s)	59, 464
MwoI	GCNNNNNNNGC	9 cut(s)	128, 306, 529, 788, 922, 1258, 1296, 1317, 1326
NaeI	GCCGGC	1 cut(s)	1297
NarI	GGCGCC	1 cut(s)	1274
NciI	CCSGG	2 cut(s)	1263, 1264
NcoI	CCATGG	1 cut(s)	777
NdeII	GATC	4 cut(s)	14, 163, 762, 1163
NgoMIV	GCCGGC	1 cut(s)	1295
NlaIV	GGNNCC	5 cut(s)	268, 451, 452, 571, 1275
NmuCI	GTSAC	6 cut(s)	406, 466, 538, 545, 829, 1111
NspI	RCATGY	3 cut(s)	300, 546, 916
PaeI	GCATGC	1 cut(s)	300
PciI	ACATGT	1 cut(s)	542
PcsI	WCGNNNNNNNCGW	2 cut(s)	63, 801
PctI	GAATGC	2 cut(s)	969, 1193
PdiI	GCCGGC	1 cut(s)	1297
PfeI	GAWTC	2 cut(s)	984, 1136
PflMI	CCANNNNNTGG	2 cut(s)	508, 759
PinAI	ACCGGT	1 cut(s)	377
PkrI	GCNGC	5 cut(s)	61, 74, 124, 522, 1278
PleI	GAGTC	2 cut(s)	792, 1213
PluTI	GGCGCC	1 cut(s)	1277
PpsI	GAGTC	2 cut(s)	792, 1213
PpuMI	RGGWCCY	2 cut(s)	237, 450
PscI	ACATGT	1 cut(s)	542
Psp1406I	AACGTT	1 cut(s)	174
Psp5II	RGGWCCY	2 cut(s)	237, 450
Psp6I	CCWGG	3 cut(s)	667, 713, 1065
PspEI	GGTNACC	1 cut(s)	1111
PspGI	CCWGG	3 cut(s)	667, 713, 1065
PspN4I	GGNNCC	5 cut(s)	268, 451, 452, 571, 1275
PspPI	GGNCC	8 cut(s)	237, 266, 276, 321, 392, 450, 711, 786
PspPPI	RGGWCCY	2 cut(s)	237, 450
PsrI	GAACNNNNNNTAC	2 cut(s)	992, 1024
PstI	CTGCAG	1 cut(s)	275
PsuI	RGATCY	2 cut(s)	14, 1163
RsaI	GTAC	3 cut(s)	107, 201, 1127
RsaNI	GTAC	3 cut(s)	106, 200, 1126
RseI	CAYNNNNRTG	1 cut(s)	1244
SaqAI	TTAA	3 cut(s)	642, 648, 1257
SatI	GCNGC	5 cut(s)	60, 73, 123, 521, 1277
Sau3AI	GATC	4 cut(s)	14, 163, 762, 1163
Sau96I	GGNCC	8 cut(s)	237, 266, 276, 321, 392, 450, 711, 786
SbfI	CCTGCAGG	1 cut(s)	275
ScaI	AGTACT	1 cut(s)	107
SchI	GAGTC	2 cut(s)	792, 1214
ScrFI	CCNGG	5 cut(s)	669, 715, 1067, 1263, 1264
SdaI	CCTGCAGG	1 cut(s)	275
SexAI	ACCWGGT	1 cut(s)	667
SfaNI	GCATC	3 cut(s)	741, 819, 1239
SfcI	CTRYAG	1 cut(s)	271
SfoI	GGCGCC	1 cut(s)	1275
SinI	GGWCC	4 cut(s)	237, 450, 711, 786
SmaI	CCCGGG	1 cut(s)	1264
SmiMI	CAYNNNNRTG	1 cut(s)	1244
SmlI	CTYRAG	1 cut(s)	241
SmoI	CTYRAG	1 cut(s)	241
SphI	GCATGC	1 cut(s)	300
Sse8387I	CCTGCAGG	1 cut(s)	275
Sse9I	AATT	2 cut(s)	92, 138
SsiI	CCGC	9 cut(s)	59, 72, 304, 331, 457, 464, 789, 825, 1277
SspDI	GGCGCC	1 cut(s)	1273
SspMI	CTAG	2 cut(s)	1304, 1330
StyD4I	CCNGG	5 cut(s)	667, 713, 1065, 1261, 1262
StyI	CCWWGG	2 cut(s)	777, 968
TaaI	ACNGT	3 cut(s)	88, 1017, 1223
TaiI	ACGT	5 cut(s)	177, 405, 481, 774, 1179
TaqI	TCGA	6 cut(s)	50, 291, 345, 558, 765, 804
TasI	AATT	2 cut(s)	92, 138
TatI	WGTACW	3 cut(s)	105, 199, 1125
TauI	GCSGC	3 cut(s)	62, 75, 1279
TfiI	GAWTC	2 cut(s)	984, 1136
Tru1I	TTAA	3 cut(s)	642, 648, 1257
Tru9I	TTAA	3 cut(s)	642, 648, 1257
TscAI	CASTG	3 cut(s)	415, 859, 1022
TseFI	GTSAC	6 cut(s)	406, 466, 538, 545, 829, 1111
TseI	GCWGC	2 cut(s)	122, 520
Tsp45I	GTSAC	6 cut(s)	406, 466, 538, 545, 829, 1111
TspDTI	ATGAA	4 cut(s)	146, 276, 1061, 1069
TspGWI	ACGGA	2 cut(s)	487, 810
TspMI	CCCGGG	1 cut(s)	1262
TspRI	CASTG	3 cut(s)	415, 859, 1022
Van91I	CCANNNNNTGG	2 cut(s)	508, 759
VpaK11BI	GGWCC	4 cut(s)	237, 450, 711, 786
XagI	CCTNNNNNAGG	1 cut(s)	444
XbaI	TCTAGA	1 cut(s)	1303
XceI	RCATGY	3 cut(s)	300, 546, 916
XmaI	CCCGGG	1 cut(s)	1262
XspI	CTAG	2 cut(s)	1304, 1330
ZrmI	AGTACT	1 cut(s)	107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.