Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0003857

Physical Location & Seq

Genomic Coordinates Forward (+)

8061751 .. 8067790

Gene Structure 6040 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G22770.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3522 bp

ATGGCTAGTTCATCTTCATCTGAGAGATGGATCGATGGTCTTCAGTTCTCTTCCTTGTTATGGCCTCCGCCACGAGATCCTCAACAACATAAGGATCAAGTCGTTGCTTATGTTGAATATTTTGGTCAATTTACATCAGAGCAATTCCCAGATGACATTGCTGAGTTGGTCCGGCATCAGTATCCATCAACTGAGAAGCGACTTTTAGACGATGTGCTGGCGATGTTTGTCCTTCATCATCCGGAGCATGGTCATGCAGTCATTCTTCCAATCATTTCATGTCTTATTGATGGCTCGTTGGTGTACAGCAAGGAAGCTCATCCGTTTGCCTCTTTCATATCTTTAGTTTGCCCAAGTAGTGAGAATGACTATTCGGAGCAATGGGCTTTGGCATGTGGAGAAATCCTTCGCATTTTGACTCATTACAACCGTCCCATTTATAAAACTGAGCAGCAAAATGGAGATACAGAGAGAAATTGTCTGAGCAAAGCTACAACTAGTGGTTCTCCGACTTCAGAGCCTAAGGCTGGATCACCAACACAGCATGAAAGGAAACCTTTAAGGCCTTTGTCTCCATGGATCAGTGATATACTACTTGCTGCTCCTCTTGGTATAAGAAGTGACTATTTCCGATGGTGTAGTGGTGTAATGGGTAAATATGCTGCTGGAGAGCTCAAGCCGCCAACCATTGCTTCTCGAGGATCTGGTAAACATCCTCAACTGATGCCTTCAACCCCAAGATGGGCTGTTGCTAATGGAGCTGGTGTCATACTGAGTGTTTGTGATGATGAAGTTGCTCGATATGAGACTGCTACGCTGACAGCGGTCGCTGTCCCTGCACTTCTTCTTCCTCCGCCAACGACATCCTTAGATGAGCATCTAGTTGCTGGCCTTCCAGCTCTTGAACCATATGCACGTTTGTTTCATAGATACTATGCCATTGCAACTCCAAGTGCTACGCAGAGACTTCTTCTTGGACTCTTAGAAGCACCACCGTCGTGGGCTCCAGATGCACTTGATGCTGCTGTACAGCTTGTGGAACTCCTTCGAGCTGCTGAAGATTATGCATCTGGTGTAAGGCTACCCAGGAACTGGATGCATTTGCACTTCTTGCGGGCTATAGGAATTGCTATGTCTATGAGGGCAGGTGTTGCTGCTGATGCTGCAGCCGCTTTGCTTTTCCGCATACTCTCACAGCCGGCACTGCTTTTTCCTCCGCTAAGTCAAGTTGAGGGAGTAGAAATTCAGCACGCGCCTATTGGTGGCTACAGTTCAAATTACAGAAAACAGATAGAAGTTCCTGCAGCAGAAGCAACCATTGAAGCCACTGCCCAAGGAATTGCCTCAATGCTTTGTGCTCATGGTCCTGAAGTTGAGTGGAGAATTTGCACTATATGGGAAGCTGCTTATGGTTTGATCCCTTTAAATTCTTCGGCGGTTGATCTTCCCGAAATCATAGTTGCTACCCCACTGCAACCTCCTATCTTGTCATGGAATTTATACATTCCACTCCTCAAAGTACTTGAATATCTTCCACGGGGGAGTCCTTCGGAAGCATGCTTGATGAAAATATTTGTTGCCACTGTGGAAACAATACTCAGTAGAACTTTTCCGCCTGAATCTTCCAGGGAACTAACCAGAAAAGCTAGATCGAGTTTTACCACAAGATCAGCGACCAAAAATCTTGCTATGTCTGAGCTTCGTGCTATGGTCCATGCTCTCTTTTTAGAATCATGCGCTGGTGTGGAATTAGCTTCACGCCTACTTTTTGTTGTGTTGACTGTATGTGTTAGCCATGAAGCACAGTCTAGTGGTAGCAAGAGACCGAGAAGTGAATATGCTAGTACTACTGAAAATATTGAGGCGAATCAACCTGTATCTAACAATCAAACTGCTAACCGTAAAAGTAGGAATGTCAAGGGACAGGGACCTGTGGCAGCATTTGATTCATACGTTCTTGCTGCTGTTTGTGCTCTTGCCTGTGAGGTTCAGCTGTATCCTATGATCTCTGGTGGGGGGAACTTTTCCAATTCTGCCGTGGCTGGAACTATTACAAAGCCTGTAAAGATAAATGGGTCATCTAAAGAGTATGGAGCTGGGATTGACTCGGCAATTAGTCATACGCGCCGAATTTTGGCAATCCTAGAGGCACTCTTTTCATTAAAACCATCTTCTGTGGGGACTCCATGGAGTTACAGTTCTAGTGAGATAGTTGCTGCGGCCATGGTTGCAGCTCATATTTCCGAACTGTTCAGACGTTCAAAGGCCTTGACGCATGCATTGTCTGGGTTGATGAGATGTAAGTGGGATAAGGAAATTCATAAAAGAGCATCATCATTATATAACCTCATAGATGTTCACAGCAAAGTTGTTGCCTCCATTGTTGACAAAGCTGAACCCTTGGAAGCCTACCTTAAGAATACACCGGTTCAGAAGGATTCTGTGACCTGTTTAAACTGGAAACAAGAGAACACATGTGCAAGCACCACATGCTTTGATACAGCGGTGACATCCGCCTCAAGGACTGAAATGAATCCAAGAGGAAACCATAAGTATGCTAGACATTCAGATGAAGGCTCAGGGAGACCCTCAGAGAAGGGTATCAAAGATTTCCTCTTGGATGCTTCTGATCTTGCGAATTTCCTCACAGCTGATAGACTCGCAGGGTTCTATTGTGGTACACAAAAGCTTTTGAGGTCAGTGCTTGCAGAGAAACCGGAGCTGTCTTTCTCCGTTGTTTCACTGTTATGGCACAAACTGATTGCTGCTCCTGAAATCCAGCCCACCGCAGAAAGCACCTCTGCGCAACAAGGATGGAGACAGGTTGTTGATGCGCTATGCAATGTCGTATCTGCAACGCCAGCGAAAGCAGCAGCAGCAGTTGTCCTTCAGGCTGAAAGGGAGTTGCAGCCTTGGATCGCCAAAGATGATGAAGAAGGCCAAAAAATGTGGAAAATCAACCAACGGATAGTCAAAGTGTTGGTGGAACTCATGCGCAATCATGACAGGCCTGAGTCACTGGTGATTCTCGCAAGTGCATCAGATCTTCTTCTGCGGGCAACTGATGGAATGCTTGTTGATGGAGAAGCTTGTACATTACCTCAACTTGAGCTACTTGAAGCCACGGCAAGAGCAATACAGCCGGTGCTAGCTTGGGGGCCATCTGGACTAGCAGTGGTCGACGGTTTATCCAATCTATTGAAGTGTCGTCTACCAGCAACAATACGGTGCCTTTCACACCCAAGTGCACACGTACGTGCCTTAAGCACGTCAGTACTACGTGATATCATGAACCAAAGCTCCATACCCATCAAAGTAACTCCAAAACTGCCAACAACAGAGAAGAACGGAATGAATAGTCCGTCCTATCGATTCTTCAACGCCGCCTCAATAGACTGGAAAGCCGATATCCAAAACTGTTTAAACTGGGAAGCTCACAGCTTGCTCTCCACAACTATGCCTACTCAGTTTCTCGACACTGCGGCTCGGGAACTCGGCTGTACTATATCCTTGTCCCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006355 GO:0006950 GO:0006979 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009636 GO:0009637 GO:0009639 GO:0009791 GO:0009889 GO:0009908 GO:0010035 GO:0010218 GO:0010378 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042542 GO:0042752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046677 GO:0048367 GO:0048511 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0080167 GO:0090567 GO:1901700 GO:1903506 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1173

Amino Acids

127.87

Weight (kDa)

6.6

Isoelectric Point (pI)

48.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22770
fragaria_vesca	FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030
malus_domestica	MD05G1033400.v1.1 MD10G1034200.v1.1
prunus_persica	Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1
pyrus_communis	pycom05g02420 pycom10g02270
rosa_chinensis	RchiOBHm_Chr6g0274251
rosa_laevigata	RLG00000013569
rosa_multiflora	Rmu_sc0005132.1_g000012 Rmu_sc0007258.1_g000001 Rmu_sc0041613.1_g000001 Rmu_sc0041918.1_g000001
rosa_roxburghii	Rroxscaffold_7G00194400
rosa_rugosa	Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080300 Rorug06G0080400
rosa_samantha	Rh6AG195200 Rh6BG199600 Rh6CG199700 Rh6DG191100
rosa_wichuraiana	Rw6G017080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	441
AarI	CACCTGC	1 cut(s)	1136
Acc16I	TGCGCA	2 cut(s)	2805, 2996
Acc36I	ACCTGC	1 cut(s)	1136
AccB1I	GGYRCC	1 cut(s)	3228
AccB7I	CCANNNNNTGG	1 cut(s)	1092
AccI	GTMKAC	2 cut(s)	3180, 3211
AccII	CGCG	2 cut(s)	1253, 2125
AccIII	TCCGGA	1 cut(s)	241
AclWI	GGATC	8 cut(s)	38, 71, 102, 538, 587, 709, 1411, 2924
AcoI	YGGCCR	1 cut(s)	2220
AcsI	RAATTY	7 cut(s)	1242, 1383, 1426, 1495, 2130, 2316, 2638
AcuI	CTGAAG	5 cut(s)	26, 498, 1077, 1389, 2873
AfaI	GTAC	9 cut(s)	305, 1029, 1521, 1846, 2680, 3094, 3255, 3276, 3502
AfiI	CCNNNNNNNGG	9 cut(s)	60, 248, 527, 741, 742, 1092, 1262, 2134, 2520
AflII	CTTAAG	2 cut(s)	2414, 3262
AflIII	ACRYGT	2 cut(s)	2474, 3250
AgeI	ACCGGT	1 cut(s)	2425
AhlI	ACTAGT	1 cut(s)	497
AjiI	CACGTC	1 cut(s)	3270
AjnI	CCWGG	2 cut(s)	1085, 1625
AjuI	GAANNNNNNNTTGG	2 cut(s)	676, 708
AleI	CACNNNNGTG	3 cut(s)	997, 3243, 3255
AloI	GAACNNNNNNTCC	4 cut(s)	2182, 2214, 3284, 3316
Alw21I	GWGCWC	4 cut(s)	675, 1360, 1975, 3250
Alw26I	GTCTC	6 cut(s)	576, 800, 958, 1816, 2578, 2812
Alw44I	GTGCAC	1 cut(s)	3246
AlwI	GGATC	8 cut(s)	38, 71, 102, 538, 587, 709, 1411, 2924
AlwNI	CAGNNNCTG	1 cut(s)	1092
Ama87I	CYCGRG	2 cut(s)	696, 3486
Aor13HI	TCCGGA	1 cut(s)	241
AoxI	GGCC	8 cut(s)	62, 563, 889, 2220, 2265, 2938, 3008, 3158
ApaLI	GTGCAC	1 cut(s)	3246
ApoI	RAATTY	7 cut(s)	1242, 1383, 1426, 1495, 2130, 2316, 2638
AsiGI	ACCGGT	1 cut(s)	2425
Asp700I	GAANNNNTTC	3 cut(s)	405, 1044, 1530
AspLEI	GCGC	6 cut(s)	1255, 1739, 2127, 2806, 2836, 2997
AspS9I	GGNCC	5 cut(s)	169, 1364, 1711, 1928, 3158
AsuHPI	GGTGA	3 cut(s)	525, 2518, 3034
AsuNHI	GCTAGC	1 cut(s)	3148
AvaI	CYCGRG	2 cut(s)	696, 3486
AvaII	GGWCC	4 cut(s)	169, 1364, 1711, 1928
AxyI	CCTNAGG	1 cut(s)	522
BaeGI	GKGCMC	1 cut(s)	3250
BaeI	ACNNNNGTAYC	2 cut(s)	2490, 2523
BanI	GGYRCC	1 cut(s)	3228
BanII	GRGCYC	2 cut(s)	675, 1006
BauI	CACGAG	1 cut(s)	72
BbsI	GAAGAC	1 cut(s)	32
Bbv12I	GWGCWC	4 cut(s)	675, 1360, 1975, 3250
BceAI	ACGGC	2 cut(s)	2021, 3141
BcgI	CGANNNNNNTGC	2 cut(s)	978, 1012
BciT130I	CCWGG	2 cut(s)	1087, 1627
BciVI	GTATCC	2 cut(s)	192, 2007
BcoDI	GTCTC	6 cut(s)	576, 800, 958, 1816, 2578, 2812
BcuI	ACTAGT	1 cut(s)	497
BfmI	CTRYAG	4 cut(s)	1119, 1164, 1267, 1302
BfrI	CTTAAG	2 cut(s)	2414, 3262
BfuAI	ACCTGC	1 cut(s)	1136
BfuI	GTATCC	2 cut(s)	192, 2007
BglII	AGATCT	1 cut(s)	3043
BmcAI	AGTACT	3 cut(s)	1521, 1846, 3276
Bme1390I	CCNGG	2 cut(s)	1087, 1627
Bme18I	GGWCC	4 cut(s)	169, 1364, 1711, 1928
BmeT110I	CYCGRG	2 cut(s)	696, 3486
BmgBI	CACGTC	1 cut(s)	3270
BmgT120I	GGNCC	5 cut(s)	169, 1364, 1711, 1928, 3158
BmiI	GGNNCC	4 cut(s)	1005, 1929, 3159, 3230
BmrFI	CCNGG	2 cut(s)	1087, 1627
BmrI	ACTGGG	1 cut(s)	3436
BmtI	GCTAGC	1 cut(s)	3152
BmuI	ACTGGG	1 cut(s)	3436
BoxI	GACNNNNGTC	1 cut(s)	824
BpiI	GAAGAC	1 cut(s)	32
BpmI	CTGGAG	2 cut(s)	687, 990
Bpu10I	CCTNAGC	1 cut(s)	2578
BpuEI	CTTGAG	3 cut(s)	659, 2503, 3128
Bsa29I	ATCGAT	2 cut(s)	33, 3370
BsaAI	YACGTR	3 cut(s)	3253, 3257, 3281
BsaBI	GATNNNNATC	1 cut(s)	876
BsaI	GGTCTC	2 cut(s)	1816, 2578
BsaWI	WCCGGW	3 cut(s)	241, 2425, 2716
BsaXI	ACNNNNNCTCC	6 cut(s)	750, 780, 2182, 2212, 3284, 3314
Bsc4I	CCNNNNNNNGG	9 cut(s)	60, 248, 527, 741, 742, 1092, 1262, 2134, 2520
Bse118I	RCCGGY	3 cut(s)	1198, 2425, 3142
Bse1I	ACTGG	5 cut(s)	1097, 2462, 3024, 3401, 3431
Bse21I	CCTNAGG	1 cut(s)	522
Bse3DI	GCAATG	5 cut(s)	156, 386, 687, 939, 2848
Bse8I	GATNNNNATC	1 cut(s)	876
BseAI	TCCGGA	1 cut(s)	241
BseBI	CCWGG	2 cut(s)	1087, 1627
BseCI	ATCGAT	2 cut(s)	33, 3370
BseGI	GGATG	8 cut(s)	238, 319, 712, 863, 1101, 2510, 2626, 2819
BseJI	GATNNNNATC	1 cut(s)	876
BseLI	CCNNNNNNNGG	9 cut(s)	60, 248, 527, 741, 742, 1092, 1262, 2134, 2520
BseMI	GCAATG	5 cut(s)	156, 386, 687, 939, 2848
BseNI	ACTGG	5 cut(s)	1097, 2462, 3024, 3401, 3431
BseRI	GAGGAG	2 cut(s)	594, 1502
BseSI	GKGCMC	1 cut(s)	3250
BseYI	CCCAGC	1 cut(s)	2096
BsgI	GTGCAG	1 cut(s)	822
Bsh1236I	CGCG	2 cut(s)	1253, 2125
Bsh1285I	CGRYCG	1 cut(s)	828
BshFI	GGCC	8 cut(s)	64, 565, 891, 2222, 2267, 2940, 3010, 3160
BshNI	GGYRCC	1 cut(s)	3228
BshTI	ACCGGT	1 cut(s)	2425
BshVI	ATCGAT	2 cut(s)	33, 3370
BsiEI	CGRYCG	1 cut(s)	828
BsiHKAI	GWGCWC	4 cut(s)	675, 1360, 1975, 3250
BsiHKCI	CYCGRG	2 cut(s)	696, 3486
BsiSI	CCGG	6 cut(s)	172, 242, 1199, 2426, 2717, 3143
BsiWI	CGTACG	1 cut(s)	3253
BslFI	GGGAC	6 cut(s)	417, 818, 1935, 1941, 2194, 3499
BslI	CCNNNNNNNGG	9 cut(s)	60, 248, 527, 741, 742, 1092, 1262, 2134, 2520
BsmAI	GTCTC	6 cut(s)	576, 800, 958, 1816, 2578, 2812
BsmFI	GGGAC	6 cut(s)	417, 818, 1935, 1941, 2194, 3499
BsmI	GAATGC	1 cut(s)	3075
BsnI	GGCC	8 cut(s)	64, 565, 891, 2222, 2267, 2940, 3010, 3160
Bso31I	GGTCTC	2 cut(s)	1816, 2578
BsoBI	CYCGRG	2 cut(s)	696, 3486
Bsp1286I	GDGCHC	5 cut(s)	675, 1006, 1360, 1975, 3250
Bsp13I	TCCGGA	1 cut(s)	241
Bsp1407I	TGTACA	3 cut(s)	303, 1027, 3092
Bsp19I	CCATGG	3 cut(s)	575, 2186, 2223
BspANI	GGCC	8 cut(s)	64, 565, 891, 2222, 2267, 2940, 3010, 3160
BspDI	ATCGAT	2 cut(s)	33, 3370
BspEI	TCCGGA	1 cut(s)	241
BspFNI	CGCG	2 cut(s)	1253, 2125
BspHI	TCATGA	2 cut(s)	3001, 3288
BspLI	GGNNCC	4 cut(s)	1005, 1929, 3159, 3230
BspMAI	CTGCAG	2 cut(s)	1168, 1306
BspMI	ACCTGC	1 cut(s)	1136
BspOI	GCTAGC	1 cut(s)	3152
BspPI	GGATC	8 cut(s)	38, 71, 102, 538, 587, 709, 1411, 2924
BspT107I	GGYRCC	1 cut(s)	3228
BspTI	CTTAAG	2 cut(s)	2414, 3262
BspTNI	GGTCTC	2 cut(s)	1816, 2578
BsrDI	GCAATG	5 cut(s)	156, 386, 687, 939, 2848
BsrFI	RCCGGY	3 cut(s)	1198, 2425, 3142
BsrGI	TGTACA	3 cut(s)	303, 1027, 3092
BsrI	ACTGG	5 cut(s)	1097, 2462, 3024, 3401, 3431
BssAI	RCCGGY	3 cut(s)	1198, 2425, 3142
BssSI	CACGAG	1 cut(s)	72
BssT1I	CCWWGG	6 cut(s)	575, 1333, 2186, 2223, 2400, 2912
Bst2BI	CACGAG	1 cut(s)	72
Bst2UI	CCWGG	2 cut(s)	1087, 1627
Bst6I	CTCTTC	1 cut(s)	55
BstAFI	CTTAAG	2 cut(s)	2414, 3262
BstAPI	GCANNNNNTGC	4 cut(s)	1019, 1111, 1151, 2490
BstAUI	TGTACA	3 cut(s)	303, 1027, 3092
BstBAI	YACGTR	3 cut(s)	3253, 3257, 3281
BstDSI	CCRYGG	6 cut(s)	575, 1535, 2037, 2186, 2223, 3123
BstF5I	GGATG	8 cut(s)	238, 319, 712, 863, 1101, 2510, 2626, 2819
BstFNI	CGCG	2 cut(s)	1253, 2125
BstHHI	GCGC	6 cut(s)	1255, 1739, 2127, 2806, 2836, 2997
BstMAI	GTCTC	6 cut(s)	576, 800, 958, 1816, 2578, 2812
BstMCI	CGRYCG	1 cut(s)	828
BstNI	CCWGG	2 cut(s)	1087, 1627
BstNSI	RCATGY	5 cut(s)	396, 1560, 2279, 2478, 2493
BstPAI	GACNNNNGTC	1 cut(s)	824
BstSCI	CCNGG	2 cut(s)	1085, 1625
BstSFI	CTRYAG	4 cut(s)	1119, 1164, 1267, 1302
BstSLI	GKGCMC	1 cut(s)	3250
BstUI	CGCG	2 cut(s)	1253, 2125
BstV2I	GAAGAC	1 cut(s)	32
BstX2I	RGATCY	3 cut(s)	76, 701, 3043
BstXI	CCANNNNNNTGG	1 cut(s)	999
BstYI	RGATCY	3 cut(s)	76, 701, 3043
Bsu15I	ATCGAT	2 cut(s)	33, 3370
Bsu36I	CCTNAGG	1 cut(s)	522
BsuI	GTATCC	2 cut(s)	192, 2007
BsuRI	GGCC	8 cut(s)	64, 565, 891, 2222, 2267, 2940, 3010, 3160
BsuTUI	ATCGAT	2 cut(s)	33, 3370
BtgI	CCRYGG	6 cut(s)	575, 1535, 2037, 2186, 2223, 3123
BtgZI	GCGATG	1 cut(s)	236
BtrI	CACGTC	1 cut(s)	3270
BtsCI	GGATG	8 cut(s)	238, 319, 712, 863, 1101, 2510, 2626, 2819
BtsI	GCAGTG	5 cut(s)	1202, 1326, 1469, 3180, 3477
BveI	ACCTGC	1 cut(s)	1136
CaiI	CAGNNNCTG	1 cut(s)	1092
CciI	TCATGA	2 cut(s)	3001, 3288
CfoI	GCGC	6 cut(s)	1255, 1739, 2127, 2806, 2836, 2997
Cfr10I	RCCGGY	3 cut(s)	1198, 2425, 3142
Cfr13I	GGNCC	5 cut(s)	169, 1364, 1711, 1928, 3158
ClaI	ATCGAT	2 cut(s)	33, 3370
CseI	GACGC	1 cut(s)	2281
Csp6I	GTAC	9 cut(s)	304, 1028, 1520, 1845, 2679, 3093, 3254, 3275, 3501
CspAI	ACCGGT	1 cut(s)	2425
CspCI	CAANNNNNGTGG	4 cut(s)	2476, 2511, 2930, 2965
CviQI	GTAC	9 cut(s)	304, 1028, 1520, 1845, 2679, 3093, 3254, 3275, 3501
DraI	TTTAAA	3 cut(s)	1425, 2454, 3423
EaeI	YGGCCR	1 cut(s)	2220
Eam1104I	CTCTTC	1 cut(s)	55
EarI	CTCTTC	1 cut(s)	55
EciI	GGCGGA	4 cut(s)	57, 843, 1602, 2503
Ecl136II	GAGCTC	1 cut(s)	673
Eco130I	CCWWGG	6 cut(s)	575, 1333, 2186, 2223, 2400, 2912
Eco147I	AGGCCT	3 cut(s)	565, 2267, 3010
Eco24I	GRGCYC	2 cut(s)	675, 1006
Eco31I	GGTCTC	2 cut(s)	1816, 2578
Eco32I	GATATC	2 cut(s)	3286, 3409
Eco47I	GGWCC	4 cut(s)	169, 1364, 1711, 1928
Eco53kI	GAGCTC	1 cut(s)	673
Eco57I	CTGAAG	5 cut(s)	26, 498, 1077, 1389, 2873
Eco81I	CCTNAGG	1 cut(s)	522
Eco88I	CYCGRG	2 cut(s)	696, 3486
EcoICRI	GAGCTC	1 cut(s)	673
EcoO109I	RGGNCCY	1 cut(s)	1928
EcoRII	CCWGG	2 cut(s)	1085, 1625
EcoRV	GATATC	2 cut(s)	3286, 3409
EcoT14I	CCWWGG	6 cut(s)	575, 1333, 2186, 2223, 2400, 2912
EcoT22I	ATGCAT	3 cut(s)	1069, 1101, 2281
EcoT38I	GRGCYC	2 cut(s)	675, 1006
ErhI	CCWWGG	6 cut(s)	575, 1333, 2186, 2223, 2400, 2912
FalI	AAGNNNNNCTT	4 cut(s)	541, 573, 2397, 2429
FaqI	GGGAC	6 cut(s)	417, 818, 1935, 1941, 2194, 3499
FauI	CCCGC	2 cut(s)	1107, 3048
FauNDI	CATATG	1 cut(s)	910
FblI	GTMKAC	2 cut(s)	3180, 3211
FokI	GGATG	8 cut(s)	225, 306, 699, 850, 1108, 2497, 2633, 2826
FriOI	GRGCYC	2 cut(s)	675, 1006
FspI	TGCGCA	2 cut(s)	2805, 2996
GlaI	GCGC	6 cut(s)	1254, 1738, 2126, 2805, 2835, 2996
GsaI	CCCAGC	1 cut(s)	2100
GsuI	CTGGAG	2 cut(s)	687, 990
HaeIII	GGCC	8 cut(s)	64, 565, 891, 2222, 2267, 2940, 3010, 3160
HapII	CCGG	6 cut(s)	172, 242, 1199, 2426, 2717, 3143
HgaI	GACGC	1 cut(s)	2281
HhaI	GCGC	6 cut(s)	1255, 1739, 2127, 2806, 2836, 2997
Hin6I	GCGC	6 cut(s)	1253, 1737, 2125, 2804, 2834, 2995
HinP1I	GCGC	6 cut(s)	1253, 1737, 2125, 2804, 2834, 2995
HincII	GTYRAC	3 cut(s)	1779, 2386, 3181
HindII	GTYRAC	3 cut(s)	1779, 2386, 3181
HindIII	AAGCTT	2 cut(s)	2687, 3087
HpaII	CCGG	6 cut(s)	172, 242, 1199, 2426, 2717, 3143
HphI	GGTGA	3 cut(s)	525, 2518, 3034
Hpy166II	GTNNAC	9 cut(s)	304, 710, 1779, 2359, 2386, 2681, 3181, 3212, 3248
Hpy8I	GTNNAC	9 cut(s)	304, 710, 1779, 2359, 2386, 2681, 3181, 3212, 3248
Hpy99I	CGWCG	2 cut(s)	1000, 3185
HpyCH4IV	ACGT	7 cut(s)	916, 1953, 2257, 3252, 3256, 3269, 3280
HpySE526I	ACGT	7 cut(s)	916, 1953, 2257, 3252, 3256, 3269, 3280
HspAI	GCGC	6 cut(s)	1253, 1737, 2125, 2804, 2834, 2995
Kpn2I	TCCGGA	1 cut(s)	241
KroI	GCCGGC	1 cut(s)	1198
KroNI	GCCGGC	1 cut(s)	1200
LmnI	GCTCC	9 cut(s)	244, 376, 607, 758, 1009, 2093, 2719, 2773, 3305
MaeII	ACGT	7 cut(s)	916, 1953, 2257, 3252, 3256, 3269, 3280
MaeIII	GTNAC	6 cut(s)	620, 2192, 2443, 2506, 3015, 3316
MflI	RGATCY	3 cut(s)	76, 701, 3043
MhlI	GDGCHC	5 cut(s)	675, 1006, 1360, 1975, 3250
MlyI	GAGTC	7 cut(s)	412, 972, 1552, 2099, 2176, 2652, 3023
MmeI	TCCRAC	1 cut(s)	533
Mph1103I	ATGCAT	3 cut(s)	1069, 1101, 2281
MroI	TCCGGA	1 cut(s)	241
MroNI	GCCGGC	1 cut(s)	1198
MroXI	GAANNNNTTC	3 cut(s)	405, 1044, 1530
MseI	TTAA	7 cut(s)	560, 1424, 2162, 2415, 2453, 3263, 3422
MslI	CAYNNNNRTG	8 cut(s)	252, 997, 2553, 2568, 2746, 3243, 3255, 3455
MspA1I	CMGCKG	4 cut(s)	824, 1993, 2504, 2651
MspCI	CTTAAG	2 cut(s)	2414, 3262
MspI	CCGG	6 cut(s)	172, 242, 1199, 2426, 2717, 3143
MspR9I	CCNGG	2 cut(s)	1087, 1627
MssI	GTTTAAAC	2 cut(s)	2454, 3423
Mva1269I	GAATGC	1 cut(s)	3075
MvaI	CCWGG	2 cut(s)	1087, 1627
MvnI	CGCG	2 cut(s)	1253, 2125
NaeI	GCCGGC	1 cut(s)	1200
NcoI	CCATGG	3 cut(s)	575, 2186, 2223
NdeI	CATATG	1 cut(s)	910
NgoMIV	GCCGGC	1 cut(s)	1198
NheI	GCTAGC	1 cut(s)	3148
NlaIV	GGNNCC	4 cut(s)	1005, 1929, 3159, 3230
NmeAIII	GCCGAG	2 cut(s)	2087, 3474
NmuCI	GTSAC	4 cut(s)	620, 2443, 2506, 3015
NsbI	TGCGCA	2 cut(s)	2805, 2996
NsiI	ATGCAT	3 cut(s)	1069, 1101, 2281
NspI	RCATGY	5 cut(s)	396, 1560, 2279, 2478, 2493
OliI	CACNNNNGTG	3 cut(s)	997, 3243, 3255
PaeI	GCATGC	2 cut(s)	1560, 2279
PaeR7I	CTCGAG	1 cut(s)	696
PagI	TCATGA	2 cut(s)	3001, 3288
PaqCI	CACCTGC	1 cut(s)	1136
PceI	AGGCCT	3 cut(s)	565, 2267, 3010
PciI	ACATGT	1 cut(s)	2474
PctI	GAATGC	1 cut(s)	3075
PdiI	GCCGGC	1 cut(s)	1200
PdmI	GAANNNNTTC	3 cut(s)	405, 1044, 1530
PfeI	GAWTC	8 cut(s)	1619, 1730, 1867, 1946, 2438, 2533, 3025, 3372
Pfl23II	CGTACG	1 cut(s)	3253
PflMI	CCANNNNNTGG	1 cut(s)	1092
PinAI	ACCGGT	1 cut(s)	2425
PleI	GAGTC	7 cut(s)	412, 972, 1551, 2099, 2176, 2652, 3022
PmeI	GTTTAAAC	2 cut(s)	2454, 3423
PpsI	GAGTC	7 cut(s)	412, 972, 1551, 2099, 2176, 2652, 3022
Ppu21I	YACGTR	3 cut(s)	3253, 3257, 3281
PpuMI	RGGWCCY	1 cut(s)	1928
PscI	ACATGT	1 cut(s)	2474
PshAI	GACNNNNGTC	1 cut(s)	824
PsiI	TTATAA	1 cut(s)	441
Psp124BI	GAGCTC	1 cut(s)	675
Psp5II	RGGWCCY	1 cut(s)	1928
Psp6I	CCWGG	2 cut(s)	1085, 1625
PspFI	CCCAGC	1 cut(s)	2096
PspGI	CCWGG	2 cut(s)	1085, 1625
PspLI	CGTACG	1 cut(s)	3253
PspN4I	GGNNCC	4 cut(s)	1005, 1929, 3159, 3230
PspPI	GGNCC	5 cut(s)	169, 1364, 1711, 1928, 3158
PspPPI	RGGWCCY	1 cut(s)	1928
PstI	CTGCAG	2 cut(s)	1168, 1306
PstNI	CAGNNNCTG	1 cut(s)	1092
PsuI	RGATCY	3 cut(s)	76, 701, 3043
PvuII	CAGCTG	2 cut(s)	1993, 2651
RsaI	GTAC	9 cut(s)	305, 1029, 1521, 1846, 2680, 3094, 3255, 3276, 3502
RsaNI	GTAC	9 cut(s)	304, 1028, 1520, 1845, 2679, 3093, 3254, 3275, 3501
RseI	CAYNNNNRTG	8 cut(s)	252, 997, 2553, 2568, 2746, 3243, 3255, 3455
SacI	GAGCTC	1 cut(s)	675
SalI	GTCGAC	1 cut(s)	3179
SaqAI	TTAA	7 cut(s)	560, 1424, 2162, 2415, 2453, 3263, 3422
Sau96I	GGNCC	5 cut(s)	169, 1364, 1711, 1928, 3158
ScaI	AGTACT	3 cut(s)	1521, 1846, 3276
SchI	GAGTC	7 cut(s)	412, 972, 1552, 2099, 2176, 2652, 3023
ScrFI	CCNGG	2 cut(s)	1087, 1627
SduI	GDGCHC	5 cut(s)	675, 1006, 1360, 1975, 3250
SfcI	CTRYAG	4 cut(s)	1119, 1164, 1267, 1302
Sfr274I	CTCGAG	1 cut(s)	696
SinI	GGWCC	4 cut(s)	169, 1364, 1711, 1928
SlaI	CTCGAG	1 cut(s)	696
SmiMI	CAYNNNNRTG	8 cut(s)	252, 997, 2553, 2568, 2746, 3243, 3255, 3455
SmlI	CTYRAG	6 cut(s)	674, 696, 2414, 2518, 3107, 3262
SmoI	CTYRAG	6 cut(s)	674, 696, 2414, 2518, 3107, 3262
SpeI	ACTAGT	1 cut(s)	497
SphI	GCATGC	2 cut(s)	1560, 2279
SseBI	AGGCCT	3 cut(s)	565, 2267, 3010
SspI	AATATT	3 cut(s)	119, 1572, 1858
SstI	GAGCTC	1 cut(s)	675
StuI	AGGCCT	3 cut(s)	565, 2267, 3010
StyD4I	CCNGG	2 cut(s)	1085, 1625
StyI	CCWWGG	6 cut(s)	575, 1333, 2186, 2223, 2400, 2912
TaiI	ACGT	7 cut(s)	919, 1956, 2260, 3255, 3259, 3272, 3283
TaqI	TCGA	8 cut(s)	33, 697, 799, 1048, 1652, 3180, 3370, 3474
TaqII	GACCGA	1 cut(s)	1840
TatI	WGTACW	7 cut(s)	303, 1027, 1519, 1844, 3092, 3274, 3500
TauI	GCSGC	5 cut(s)	682, 1172, 2222, 3386, 3485
TfiI	GAWTC	8 cut(s)	1619, 1730, 1867, 1946, 2438, 2533, 3025, 3372
Tru1I	TTAA	7 cut(s)	560, 1424, 2162, 2415, 2453, 3263, 3422
Tru9I	TTAA	7 cut(s)	560, 1424, 2162, 2415, 2453, 3263, 3422
TseFI	GTSAC	4 cut(s)	620, 2443, 2506, 3015
Tsp45I	GTSAC	4 cut(s)	620, 2443, 2506, 3015
TspGWI	ACGGA	5 cut(s)	312, 2722, 2980, 3351, 3363
Van91I	CCANNNNNTGG	1 cut(s)	1092
Vha464I	CTTAAG	2 cut(s)	2414, 3262
VneI	GTGCAC	1 cut(s)	3246
VpaK11BI	GGWCC	4 cut(s)	169, 1364, 1711, 1928
XapI	RAATTY	7 cut(s)	1242, 1383, 1426, 1495, 2130, 2316, 2638
XceI	RCATGY	5 cut(s)	396, 1560, 2279, 2478, 2493
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2035
XhoI	CTCGAG	1 cut(s)	696
XmiI	GTMKAC	2 cut(s)	3180, 3211
XmnI	GAANNNNTTC	3 cut(s)	405, 1044, 1530
ZrmI	AGTACT	3 cut(s)	1521, 1846, 3276
Zsp2I	ATGCAT	3 cut(s)	1069, 1101, 2281

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.