Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0003857

Physical Location & Seq

Genomic Coordinates Reverse (-)

2851280 .. 2859513

Gene Structure 8234 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g02420.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3027 bp

ATGGCTGCTACATCTGAAAGATGGTTTGATCGGCTTCAGTTCTCCTCATTGTTTGGGCCGCCCCCGCAGGACACCCTACCACGGAAGGCACAAATTACTGCATATGTGGACTACTTTGGTCAGTTTACATCAGAACAGTTTCCTGAGGATATTGCCGAACTGATCCGCAACCGTTATCCATCAGAGGTGAAGCGTCTCTTTGATGATGTTCTAGCTATGTTTGTTCTTCATCACCCTGAGCATGGACATGCTGTTATCCTTCCAATTATTTCATGCATCATTGATGGTACCCTGGCCTATAAGAGCAGTAGCCCTCCATTTGCTTCGTTCATATCATTGGTCTGCCCAAGCAGTGAGGAGTATTCTGAGCAGTGGGCTTTGGCATGTGGGGAGATTTTGCGAATTTTAACTCATTACAATCGCCCCATATACAAGGCCGAACAACAGAATAATGAAACAGAAAGAAGCAGCAGTGGAAGCCATGCCACAACAAGTGACTCTGGAGATGGTGAATCCAGCCATTTACCTTTGGTACAACAAGAGAAGAAACCCATAAGGCCGTTGTCTCCTTGGATTACTGATATATTGCTTGCTGCACCTCTAGGCATCAGAAGTGATTACTTCCGCTGGTGCAGCGGGGTTATGGGAAAATATGCTGCAGGAGAACTCAAGCCACCATCAACTGCTTCTTCTCGCGGATCTGGAAAACATCCACAGCTCATGCCTTCAACTCCAAGGTGGGCTGTTGCAAACGGTGCTGGAGTTATATTAAGTGTTTGCGATGAGGAAGTTGCTCACTATGAGACTGCTACTTTGACAGCAGTCGCTGTCCCTGCACTTCTTCTTCCTCCTCCAACTACAGCTTTGGATGAACACCTAGTGGCGGGGCTACCAGCTCTTGAGCCTTATGCACGTTTATTTCATAGGTATTATGCCATTGCTACTCCAAGTGCCACCCAAAGACTTCTTCTTGGACTTCTAGAAGCACCACCATCCTGGGCTCCTGATGCACTTGATGCAGCTGTACAGCTTGTGGAACTACTTCGTGCTGCTGAGGATTATGCATCTGGCATAAGGCTTCCTAGGAACTGGATGCATTTACATTTCTTGCGGGCAATTGGGACTGCAATGTCCATGAGAGCAGGTATAGCAGCTGATGCTGCGGCAGCTTTACTTTTCCGAATACTCTCACAGCCTGCATTGCTTTTCCCTCCACTAAGACAAGTTGATGGAGTTGAAGTTCAGCATGAGCCTTTGGGTGGTTACATCTCAAGCTACAAGAAACAGATCGAACTTCCTGCCGCGGAAGCTACAATTGAAGCTACTGCCCAAGGGATTGCTTCTATGCTCTGTGCCCATGGGCCTGAGGTTGAATGGAGAATTTGTACCATATGGGAAGCTGCCTATGGCCTCATTCCTTTAAGTTCCTCTGCAGTTGACCTTCCTGAGATTATTGTTGCCACTCCATTACAACCTCCGATTTTATCGTGGAATCTGTATATACCCCTCCTCAAGGTCTTGGAGTATCTTCCTCGTGGAAGTCCTTCTGAGGCATGTCTTATGAAGATATTTGTTGCCACTGTTGAAGCGATTCTTCAGAGAACATTTCCGTCTGAGTCCTCTAGAGAGCAAAACCGGAAAACAAGGTACCTTTTTGGTATGGGGCCGGCCTCAAAAAACCTGGCTGTTGCAGAGCTGCGTACAATGGTTCATTCACTATTCTTAGAATCATGTGCCTCAGTAGAGCTTGCTTCACGTCTACTTTTTGTTGTGTTAACTGTATGTGTCAGTCATGAAGCGCAGTCCAATGGTAGCAAGAAAGCAAGAGTTGATGAAAGCTTCCCACCAAATCAGAGCATTGAAGAATCAGATAAGATGTCTGATATGCAGAGAGACAGAACTAAAACTACCAAAAAACAAGGGCCAGTAGCAGCATTTGATTCTTATGTTCTGGCTGCTGTTTGTGCTCTTGCATGTGAGCTTCAGTTATTCCCTTTGATTTCAAAGGGGATTAATCACAGTCACTCTAAAAATGCAAAAAATGTAGCAAAGCCTGCGAAAGTAAATGTATGCACTACTGAGTTTCGAAGTAGTGTAGACTCGGCAGTTTGTCACACACGCAGAATATTATCAATCTTGGAAGCACTTTTTTTGCTGAAGCCATCTACAATTGGCACTTCGTGGAGTTACAGTTCAAATGAGATAGTTGCAGCAGCTATGGTTGCCGCTCATGTTTCTGAGTTATTTAGATGGTCGAAAGCTTGCATGCATGCGCTGTCTGTCTTGATGCGCTGTAAGTGGGACACTGAAATTTGCTCCAGGGCATCATCACTATACAACCTTATTGATTTCCACAGCAAGGCTGTTGCATCTATTGTTAACAAGGCTGAACCATTGGAAGCACGCTTAATGCAAGTTCCAATTTGGAGGGATTCCTTTGTGTGTTTTGAAGGCAGAAAACTCAGTCAAGGTGGAAACAGTAGATGCTCCATTGTCGGGCAGCCATCTGCCTTGCATTGTGAGGATTCTTCACATTCAGAATCTAAACGAAAATCTGTTGGTGCATCACGTTCAAATGAGGGGTCCGGAAATACCTTTGGTAAAGGTGTTGCAAGTTTCCCATTAGATGCTTCGGATTTGGCCAACTTTCTTACCATGGACAGGCATATAGGATTTAATTGCAGTGCTCAGGTTCTTCTAAGATCAGTACTCGCAGAGAAACAAGAGCTCTGTTTCTCCGTTGTCTCGCTGTTGTGGTACAAGTTAATTGCAGCTCCTGAAACCCAACCTTCTGCAGAAAGCACTTCTGCTCAACAAGGATGGCGGCAGGTCGTTGATGCATTATGCAATGTTGTGTCAGCAACACCCAAAAAAGCAGCCACAGCAATCGTTCTTCAGATACTGAAAACTAGATCTTTTATTGCAAAAGTTGTTCTTGGCTGGTGTCAAAACATTCTGGGGTCAGAAGATGTGGCGAATCAACCAGCGGATTGTGAAATTGATTGTGGAGTTGATGAGAATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006355 GO:0006950 GO:0006979 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009636 GO:0009637 GO:0009639 GO:0009791 GO:0009889 GO:0009908 GO:0010035 GO:0010218 GO:0010378 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042542 GO:0042752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046677 GO:0048367 GO:0048511 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0080167 GO:0090567 GO:1901700 GO:1903506 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1009

Amino Acids

110.14

Weight (kDa)

6.32

Isoelectric Point (pI)

55.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22770
fragaria_vesca	FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030
malus_domestica	MD05G1033400.v1.1 MD10G1034200.v1.1
prunus_persica	Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1
pyrus_communis	pycom05g02420 pycom10g02270
rosa_chinensis	RchiOBHm_Chr6g0274251
rosa_laevigata	RLG00000013569
rosa_multiflora	Rmu_sc0005132.1_g000012 Rmu_sc0007258.1_g000001 Rmu_sc0041613.1_g000001 Rmu_sc0041918.1_g000001
rosa_roxburghii	Rroxscaffold_7G00194400
rosa_rugosa	Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080300 Rorug06G0080400
rosa_samantha	Rh6AG195200 Rh6BG199600 Rh6CG199700 Rh6DG191100
rosa_wichuraiana	Rw6G017080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1129
Acc36I	ACCTGC	2 cut(s)	1133, 2818
Acc65I	GGTACC	2 cut(s)	287, 1647
AccB1I	GGYRCC	2 cut(s)	287, 1647
AccBSI	CCGCTC	1 cut(s)	2228
AccI	GTMKAC	2 cut(s)	1759, 2097
AccII	CGCG	2 cut(s)	696, 1304
AccIII	TCCGGA	1 cut(s)	2585
AclWI	GGATC	2 cut(s)	157, 706
AcoI	YGGCCR	1 cut(s)	2640
AcsI	RAATTY	4 cut(s)	402, 1380, 2310, 3019
AcuI	CTGAAG	5 cut(s)	20, 1580, 1967, 2177, 2879
AdeI	CACNNNGTG	2 cut(s)	880, 2181
AfaI	GTAC	8 cut(s)	289, 534, 1026, 1387, 1649, 1702, 2709, 2759
AfiI	CCNNNNNNNGG	8 cut(s)	81, 242, 883, 1259, 1513, 2359, 2496, 2661
AjiI	CACGTC	1 cut(s)	1757
AjnI	CCWGG	4 cut(s)	291, 995, 1680, 2318
AjuI	GAANNNNNNNTTGG	2 cut(s)	951, 983
AloI	GAACNNNNNNTCC	4 cut(s)	1224, 1256, 2176, 2208
Alw21I	GWGCWC	3 cut(s)	1969, 2689, 2730
Alw26I	GTCTC	5 cut(s)	200, 570, 797, 1887, 2749
AlwI	GGATC	2 cut(s)	157, 706
AlwNI	CAGNNNCTG	3 cut(s)	827, 2777, 2902
Aor13HI	TCCGGA	1 cut(s)	2585
ApoI	RAATTY	4 cut(s)	402, 1380, 2310, 3019
ArsI	GACNNNNNNTTYG	4 cut(s)	796, 828, 2567, 2599
AseI	ATTAAT	1 cut(s)	2013
Asp700I	GAANNNNTTC	4 cut(s)	138, 1041, 1543, 1590
Asp718I	GGTACC	2 cut(s)	287, 1647
AspA2I	CCTAGG	1 cut(s)	1082
AspLEI	GCGC	3 cut(s)	1801, 2275, 2292
AspS9I	GGNCC	5 cut(s)	56, 1361, 1664, 1922, 2583
AsuHPI	GGTGA	3 cut(s)	199, 224, 521
AsuII	TTCGAA	1 cut(s)	2086
AvaII	GGWCC	1 cut(s)	2583
AvrII	CCTAGG	1 cut(s)	1082
AxyI	CCTNAGG	2 cut(s)	144, 1365
BaeGI	GKGCMC	1 cut(s)	1357
BalI	TGGCCA	1 cut(s)	2642
BanI	GGYRCC	2 cut(s)	287, 1647
BanII	GRGCYC	2 cut(s)	1003, 2730
BauI	CACGAG	1 cut(s)	1533
Bbv12I	GWGCWC	3 cut(s)	1969, 2689, 2730
BbvCI	CCTCAGC	1 cut(s)	1053
BceAI	ACGGC	1 cut(s)	544
BcgI	CGANNNNNNTGC	2 cut(s)	1280, 1314
BciT130I	CCWGG	4 cut(s)	293, 997, 1682, 2320
BcoDI	GTCTC	5 cut(s)	200, 570, 797, 1887, 2749
BfaI	CTAG	7 cut(s)	212, 602, 878, 980, 1083, 1623, 2910
BfmI	CTRYAG	4 cut(s)	657, 858, 1431, 2793
BfuAI	ACCTGC	2 cut(s)	1133, 2818
BglII	AGATCT	1 cut(s)	2912
BlnI	CCTAGG	1 cut(s)	1082
BmcAI	AGTACT	1 cut(s)	2709
Bme1390I	CCNGG	4 cut(s)	293, 997, 1682, 2320
Bme18I	GGWCC	1 cut(s)	2583
BmgBI	CACGTC	1 cut(s)	1757
BmgT120I	GGNCC	5 cut(s)	56, 1361, 1664, 1922, 2583
BmiI	GGNNCC	5 cut(s)	289, 1002, 1649, 1665, 2584
BmrFI	CCNGG	4 cut(s)	293, 997, 1682, 2320
BoxI	GACNNNNGTC	1 cut(s)	821
BpmI	CTGGAG	3 cut(s)	522, 780, 2302
Bpu10I	CCTNAGC	3 cut(s)	237, 1053, 2688
Bpu14I	TTCGAA	1 cut(s)	2086
BpuEI	CTTGAG	4 cut(s)	653, 920, 1255, 1496
BsaWI	WCCGGW	2 cut(s)	1635, 2585
BsaXI	ACNNNNNCTCC	6 cut(s)	1224, 1254, 1369, 1399, 2176, 2206
Bsc4I	CCNNNNNNNGG	8 cut(s)	81, 242, 883, 1259, 1513, 2359, 2496, 2661
Bse118I	RCCGGY	1 cut(s)	1666
Bse1I	ACTGG	2 cut(s)	1094, 1925
Bse21I	CCTNAGG	2 cut(s)	144, 1365
Bse3DI	GCAATG	4 cut(s)	936, 1134, 1199, 2854
BseAI	TCCGGA	1 cut(s)	2585
BseBI	CCWGG	4 cut(s)	293, 997, 1682, 2320
BseGI	GGATG	5 cut(s)	709, 874, 992, 1098, 2825
BseLI	CCNNNNNNNGG	8 cut(s)	81, 242, 883, 1259, 1513, 2359, 2496, 2661
BseMI	GCAATG	4 cut(s)	936, 1134, 1199, 2854
BseNI	ACTGG	2 cut(s)	1094, 1925
BseRI	GAGGAG	4 cut(s)	34, 371, 840, 1499
BseSI	GKGCMC	1 cut(s)	1357
BsgI	GTGCAG	3 cut(s)	579, 652, 819
Bsh1236I	CGCG	2 cut(s)	696, 1304
BshNI	GGYRCC	2 cut(s)	287, 1647
BsiHKAI	GWGCWC	3 cut(s)	1969, 2689, 2730
BsiSI	CCGG	3 cut(s)	1636, 1667, 2586
BslFI	GGGAC	3 cut(s)	815, 1135, 2315
BslI	CCNNNNNNNGG	8 cut(s)	81, 242, 883, 1259, 1513, 2359, 2496, 2661
BsmAI	GTCTC	5 cut(s)	200, 570, 797, 1887, 2749
BsmBI	CGTCTC	1 cut(s)	200
BsmFI	GGGAC	3 cut(s)	815, 1135, 2315
Bsp119I	TTCGAA	1 cut(s)	2086
Bsp1286I	GDGCHC	5 cut(s)	1003, 1357, 1969, 2689, 2730
Bsp13I	TCCGGA	1 cut(s)	2585
Bsp1407I	TGTACA	1 cut(s)	1024
Bsp143I	GATC	6 cut(s)	28, 162, 698, 1287, 2702, 2912
Bsp19I	CCATGG	2 cut(s)	1357, 2655
BspEI	TCCGGA	1 cut(s)	2585
BspFNI	CGCG	2 cut(s)	696, 1304
BspHI	TCATGA	2 cut(s)	1792, 3023
BspLI	GGNNCC	5 cut(s)	289, 1002, 1649, 1665, 2584
BspMAI	CTGCAG	3 cut(s)	661, 1435, 2797
BspMI	ACCTGC	2 cut(s)	1133, 2818
BspPI	GGATC	2 cut(s)	157, 706
BspT104I	TTCGAA	1 cut(s)	2086
BspT107I	GGYRCC	2 cut(s)	287, 1647
BsrBI	CCGCTC	1 cut(s)	2228
BsrDI	GCAATG	4 cut(s)	936, 1134, 1199, 2854
BsrFI	RCCGGY	1 cut(s)	1666
BsrGI	TGTACA	1 cut(s)	1024
BsrI	ACTGG	2 cut(s)	1094, 1925
BssAI	RCCGGY	1 cut(s)	1666
BssMI	GATC	6 cut(s)	28, 162, 698, 1287, 2702, 2912
BssSI	CACGAG	1 cut(s)	1533
BssT1I	CCWWGG	6 cut(s)	569, 734, 1082, 1330, 1357, 2655
Bst2BI	CACGAG	1 cut(s)	1533
Bst2UI	CCWGG	4 cut(s)	293, 997, 1682, 2320
Bst4CI	ACNGT	8 cut(s)	138, 173, 755, 1582, 1780, 2021, 2192, 2480
BstAPI	GCANNNNNTGC	4 cut(s)	755, 1016, 1157, 2054
BstAUI	TGTACA	1 cut(s)	1024
BstBI	TTCGAA	1 cut(s)	2086
BstDSI	CCRYGG	4 cut(s)	80, 1302, 1357, 2655
BstENI	CCTNNNNNAGG	1 cut(s)	1511
BstF5I	GGATG	5 cut(s)	709, 874, 992, 1098, 2825
BstFNI	CGCG	2 cut(s)	696, 1304
BstHHI	GCGC	3 cut(s)	1801, 2275, 2292
BstKTI	GATC	6 cut(s)	31, 165, 701, 1290, 2705, 2915
BstMAI	GTCTC	5 cut(s)	200, 570, 797, 1887, 2749
BstMBI	GATC	6 cut(s)	28, 162, 698, 1287, 2702, 2912
BstNI	CCWGG	4 cut(s)	293, 997, 1682, 2320
BstNSI	RCATGY	6 cut(s)	251, 387, 1557, 1977, 2269, 2273
BstPAI	GACNNNNGTC	1 cut(s)	821
BstSCI	CCNGG	4 cut(s)	291, 995, 1680, 2318
BstSFI	CTRYAG	4 cut(s)	657, 858, 1431, 2793
BstSLI	GKGCMC	1 cut(s)	1357
BstUI	CGCG	2 cut(s)	696, 1304
BstX2I	RGATCY	2 cut(s)	698, 2912
BstXI	CCANNNNNNTGG	1 cut(s)	996
BstYI	RGATCY	2 cut(s)	698, 2912
Bsu36I	CCTNAGG	2 cut(s)	144, 1365
BtgI	CCRYGG	4 cut(s)	80, 1302, 1357, 2655
BtgZI	GCGATG	1 cut(s)	795
BtrI	CACGTC	1 cut(s)	1757
BtsCI	GGATG	5 cut(s)	709, 874, 992, 1098, 2825
BtsI	GCAGTG	4 cut(s)	358, 377, 478, 2689
BtsIMutI	CAGTG	6 cut(s)	358, 377, 478, 1578, 2304, 2689
BveI	ACCTGC	2 cut(s)	1133, 2818
CaiI	CAGNNNCTG	3 cut(s)	827, 2777, 2902
CciI	TCATGA	2 cut(s)	1792, 3023
CfoI	GCGC	3 cut(s)	1801, 2275, 2292
Cfr10I	RCCGGY	1 cut(s)	1666
Cfr13I	GGNCC	5 cut(s)	56, 1361, 1664, 1922, 2583
Cfr42I	CCGCGG	1 cut(s)	1305
CseI	GACGC	1 cut(s)	182
Csp6I	GTAC	8 cut(s)	288, 533, 1025, 1386, 1648, 1701, 2708, 2758
CviQI	GTAC	8 cut(s)	288, 533, 1025, 1386, 1648, 1701, 2708, 2758
DpnI	GATC	6 cut(s)	30, 164, 700, 1289, 2704, 2914
DpnII	GATC	6 cut(s)	28, 162, 698, 1287, 2702, 2912
DraIII	CACNNNGTG	2 cut(s)	880, 2181
DrdI	GACNNNNNNGTC	1 cut(s)	1129
DseDI	GACNNNNNNGTC	1 cut(s)	1129
EaeI	YGGCCR	1 cut(s)	2640
Ecl136II	GAGCTC	1 cut(s)	2728
Eco130I	CCWWGG	6 cut(s)	569, 734, 1082, 1330, 1357, 2655
Eco24I	GRGCYC	2 cut(s)	1003, 2730
Eco47I	GGWCC	1 cut(s)	2583
Eco53kI	GAGCTC	1 cut(s)	2728
Eco57I	CTGAAG	5 cut(s)	20, 1580, 1967, 2177, 2879
Eco81I	CCTNAGG	2 cut(s)	144, 1365
EcoICRI	GAGCTC	1 cut(s)	2728
EcoNI	CCTNNNNNAGG	1 cut(s)	1511
EcoRI	GAATTC	1 cut(s)	3019
EcoRII	CCWGG	4 cut(s)	291, 995, 1680, 2318
EcoT14I	CCWWGG	6 cut(s)	569, 734, 1082, 1330, 1357, 2655
EcoT22I	ATGCAT	5 cut(s)	278, 1066, 1098, 2271, 2842
EcoT38I	GRGCYC	2 cut(s)	1003, 2730
ErhI	CCWWGG	6 cut(s)	569, 734, 1082, 1330, 1357, 2655
Esp3I	CGTCTC	1 cut(s)	200
FalI	AAGNNNNNCTT	6 cut(s)	182, 214, 1578, 1610, 2919, 2951
FaqI	GGGAC	3 cut(s)	815, 1135, 2315
FauI	CCCGC	4 cut(s)	72, 629, 877, 1104
FauNDI	CATATG	2 cut(s)	103, 1391
FblI	GTMKAC	2 cut(s)	1759, 2097
FokI	GGATG	5 cut(s)	696, 881, 979, 1105, 2832
FriOI	GRGCYC	2 cut(s)	1003, 2730
FseI	GGCCGGCC	1 cut(s)	1670
FspBI	CTAG	7 cut(s)	212, 602, 878, 980, 1083, 1623, 2910
GlaI	GCGC	3 cut(s)	1800, 2274, 2291
GsuI	CTGGAG	3 cut(s)	522, 780, 2302
HapII	CCGG	3 cut(s)	1636, 1667, 2586
HgaI	GACGC	1 cut(s)	182
HhaI	GCGC	3 cut(s)	1801, 2275, 2292
Hin6I	GCGC	3 cut(s)	1799, 2273, 2290
HinP1I	GCGC	3 cut(s)	1799, 2273, 2290
HincII	GTYRAC	3 cut(s)	1438, 1776, 2380
HindII	GTYRAC	3 cut(s)	1438, 1776, 2380
HindIII	AAGCTT	2 cut(s)	1837, 2259
HpaI	GTTAAC	2 cut(s)	1776, 2380
HpaII	CCGG	3 cut(s)	1636, 1667, 2586
HphI	GGTGA	3 cut(s)	199, 224, 521
Hpy166II	GTNNAC	7 cut(s)	109, 126, 1438, 1760, 1776, 2098, 2380
Hpy8I	GTNNAC	7 cut(s)	109, 126, 1438, 1760, 1776, 2098, 2380
HpyAV	CCTTC	7 cut(s)	79, 269, 735, 1451, 1554, 2444, 2799
HpyCH4III	ACNGT	8 cut(s)	138, 173, 755, 1582, 1780, 2021, 2192, 2480
HpyCH4IV	ACGT	3 cut(s)	913, 1756, 2569
HpySE526I	ACGT	3 cut(s)	913, 1756, 2569
HspAI	GCGC	3 cut(s)	1799, 2273, 2290
Kpn2I	TCCGGA	1 cut(s)	2585
KpnI	GGTACC	2 cut(s)	291, 1651
KroI	GCCGGC	1 cut(s)	1666
KroNI	GCCGGC	1 cut(s)	1668
KspAI	GTTAAC	2 cut(s)	1776, 2380
KspI	CCGCGG	1 cut(s)	1305
Kzo9I	GATC	6 cut(s)	28, 162, 698, 1287, 2702, 2912
LmnI	GCTCC	4 cut(s)	1006, 2321, 2492, 2779
MaeI	CTAG	7 cut(s)	212, 602, 878, 980, 1083, 1623, 2910
MaeII	ACGT	3 cut(s)	913, 1756, 2569
MaeIII	GTNAC	5 cut(s)	494, 1262, 2021, 2111, 2186
MalI	GATC	6 cut(s)	30, 164, 700, 1289, 2704, 2914
MbiI	CCGCTC	1 cut(s)	2228
MboI	GATC	6 cut(s)	28, 162, 698, 1287, 2702, 2912
MfeI	CAATTG	3 cut(s)	1116, 1314, 2169
MflI	RGATCY	2 cut(s)	698, 2912
MhlI	GDGCHC	5 cut(s)	1003, 1357, 1969, 2689, 2730
MlsI	TGGCCA	1 cut(s)	2642
MluNI	TGGCCA	1 cut(s)	2642
MlyI	GAGTC	3 cut(s)	491, 1625, 2093
MmeI	TCCRAC	1 cut(s)	878
Mox20I	TGGCCA	1 cut(s)	2642
Mph1103I	ATGCAT	5 cut(s)	278, 1066, 1098, 2271, 2842
MroI	TCCGGA	1 cut(s)	2585
MroNI	GCCGGC	1 cut(s)	1666
MroXI	GAANNNNTTC	4 cut(s)	138, 1041, 1543, 1590
MscI	TGGCCA	1 cut(s)	2642
MseI	TTAA	9 cut(s)	407, 770, 1421, 1775, 2013, 2379, 2408, 2676, 2765
MslI	CAYNNNNRTG	1 cut(s)	246
Msp20I	TGGCCA	1 cut(s)	2642
MspA1I	CMGCKG	6 cut(s)	627, 636, 1022, 1154, 1304, 2987
MspI	CCGG	3 cut(s)	1636, 1667, 2586
MspR9I	CCNGG	4 cut(s)	293, 997, 1682, 2320
MunI	CAATTG	3 cut(s)	1116, 1314, 2169
MvaI	CCWGG	4 cut(s)	293, 997, 1682, 2320
MvnI	CGCG	2 cut(s)	696, 1304
NaeI	GCCGGC	1 cut(s)	1668
NcoI	CCATGG	2 cut(s)	1357, 2655
NdeI	CATATG	2 cut(s)	103, 1391
NdeII	GATC	6 cut(s)	28, 162, 698, 1287, 2702, 2912
NgoMIV	GCCGGC	1 cut(s)	1666
NlaIV	GGNNCC	5 cut(s)	289, 1002, 1649, 1665, 2584
NmeAIII	GCCGAG	1 cut(s)	2081
NmuCI	GTSAC	3 cut(s)	494, 2021, 2111
NsiI	ATGCAT	5 cut(s)	278, 1066, 1098, 2271, 2842
NspI	RCATGY	6 cut(s)	251, 387, 1557, 1977, 2269, 2273
NspV	TTCGAA	1 cut(s)	2086
PaeI	GCATGC	2 cut(s)	2269, 2273
PagI	TCATGA	2 cut(s)	1792, 3023
PdiI	GCCGGC	1 cut(s)	1668
PdmI	GAANNNNTTC	4 cut(s)	138, 1041, 1543, 1590
PleI	GAGTC	3 cut(s)	491, 1624, 2093
PpsI	GAGTC	3 cut(s)	491, 1624, 2093
PshAI	GACNNNNGTC	1 cut(s)	821
PshBI	ATTAAT	1 cut(s)	2013
Psp124BI	GAGCTC	1 cut(s)	2730
Psp6I	CCWGG	4 cut(s)	291, 995, 1680, 2318
PspGI	CCWGG	4 cut(s)	291, 995, 1680, 2318
PspN4I	GGNNCC	5 cut(s)	289, 1002, 1649, 1665, 2584
PspPI	GGNCC	5 cut(s)	56, 1361, 1664, 1922, 2583
PsrI	GAACNNNNNNTAC	2 cut(s)	1891, 1923
PstI	CTGCAG	3 cut(s)	661, 1435, 2797
PstNI	CAGNNNCTG	3 cut(s)	827, 2777, 2902
PsuI	RGATCY	2 cut(s)	698, 2912
PvuII	CAGCTG	2 cut(s)	1022, 1154
RigI	GGCCGGCC	1 cut(s)	1670
RsaI	GTAC	8 cut(s)	289, 534, 1026, 1387, 1649, 1702, 2709, 2759
RsaNI	GTAC	8 cut(s)	288, 533, 1025, 1386, 1648, 1701, 2708, 2758
RseI	CAYNNNNRTG	1 cut(s)	246
SacI	GAGCTC	1 cut(s)	2730
SacII	CCGCGG	1 cut(s)	1305
SaqAI	TTAA	9 cut(s)	407, 770, 1421, 1775, 2013, 2379, 2408, 2676, 2765
Sau3AI	GATC	6 cut(s)	28, 162, 698, 1287, 2702, 2912
Sau96I	GGNCC	5 cut(s)	56, 1361, 1664, 1922, 2583
ScaI	AGTACT	1 cut(s)	2709
SchI	GAGTC	3 cut(s)	491, 1625, 2093
ScrFI	CCNGG	4 cut(s)	293, 997, 1682, 2320
SduI	GDGCHC	5 cut(s)	1003, 1357, 1969, 2689, 2730
SfcI	CTRYAG	4 cut(s)	657, 858, 1431, 2793
Sfr303I	CCGCGG	1 cut(s)	1305
SfuI	TTCGAA	1 cut(s)	2086
SgrBI	CCGCGG	1 cut(s)	1305
SinI	GGWCC	1 cut(s)	2583
SmiMI	CAYNNNNRTG	1 cut(s)	246
SmlI	CTYRAG	4 cut(s)	668, 899, 1270, 1511
SmoI	CTYRAG	4 cut(s)	668, 899, 1270, 1511
SphI	GCATGC	2 cut(s)	2269, 2273
SspI	AATATT	1 cut(s)	2127
SspMI	CTAG	7 cut(s)	212, 602, 878, 980, 1083, 1623, 2910
SstI	GAGCTC	1 cut(s)	2730
StyD4I	CCNGG	4 cut(s)	291, 995, 1680, 2318
StyI	CCWWGG	6 cut(s)	569, 734, 1082, 1330, 1357, 2655
TaaI	ACNGT	8 cut(s)	138, 173, 755, 1582, 1780, 2021, 2192, 2480
TaiI	ACGT	3 cut(s)	916, 1759, 2572
TaqI	TCGA	3 cut(s)	1290, 2086, 2255
TatI	WGTACW	2 cut(s)	1024, 2707
TauI	GCSGC	5 cut(s)	61, 1166, 1304, 2228, 2827
Tru1I	TTAA	9 cut(s)	407, 770, 1421, 1775, 2013, 2379, 2408, 2676, 2765
Tru9I	TTAA	9 cut(s)	407, 770, 1421, 1775, 2013, 2379, 2408, 2676, 2765
TscAI	CASTG	6 cut(s)	358, 377, 478, 1585, 2311, 2689
TseFI	GTSAC	3 cut(s)	494, 2021, 2111
Tsp45I	GTSAC	3 cut(s)	494, 2021, 2111
TspGWI	ACGGA	3 cut(s)	97, 1599, 2728
TspRI	CASTG	6 cut(s)	358, 377, 478, 1585, 2311, 2689
VpaK11BI	GGWCC	1 cut(s)	2583
VspI	ATTAAT	1 cut(s)	2013
XagI	CCTNNNNNAGG	1 cut(s)	1511
XapI	RAATTY	4 cut(s)	402, 1380, 2310, 3019
XbaI	TCTAGA	2 cut(s)	979, 1622
XceI	RCATGY	6 cut(s)	251, 387, 1557, 1977, 2269, 2273
XmaJI	CCTAGG	1 cut(s)	1082
XmiI	GTMKAC	2 cut(s)	1759, 2097
XmnI	GAANNNNTTC	4 cut(s)	138, 1041, 1543, 1590
XspI	CTAG	7 cut(s)	212, 602, 878, 980, 1083, 1623, 2910
ZrmI	AGTACT	1 cut(s)	2709
Zsp2I	ATGCAT	5 cut(s)	278, 1066, 1098, 2271, 2842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.