Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005132.1

Orthogroup ID

OG0003857

Physical Location & Seq

Genomic Coordinates Forward (+)

32840 .. 40316

Gene Structure 7477 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005132.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

atggcgtgttcatccgaaagatggattgatcggttgcagttctcctcattgtttgcgcctcccccgcaagacgctccaagacgaaaggctcaagtcacggcctatgtggagtactttggtcagtttacatcagaacagtttccggaggatatttctgagctgatccgtaaccgctacccatctgaggtgaagcgtctctttgacgatgtgttagctatgtttgtgctccatcatcccgagcacgggcatgctgttgtccttcccatcatttcatgtatcattgatggcactctgccctatgaaaggactagtccaccatttgcttctttcatatccttagtctgcccaagcagtgagaatgagtattccgagcagtgggccctggcatgtggggagattttacgaatcttaactcattacaatcgcccaatatacaaggcagaacaacagagttgtgaaacagaaagaagcagtagtggcagccatgctacaacaagcgactctgttgatagtgaatccagccatatacccttagtacagcaagagaggaaacctataagacctttgtctccctggatcactgatatattgcttgctgcacctctgggtatcagaagtgattacttccgctggtgcagtggagttatggggaaatatgctgccggagaactgaagccaccatcaactgcaatttgccacacccgcagaatattggccattttggaggcactgtttttgctgaaaccatcttctgttggcacctcctggagttacagttcaaatgagatagttgcagcagctatggttgcggctcatgtatctgaattatttagatggtcaaaggcttgtatgcatgcactctctgtcttgatgcgctgcaagtgggataatgaaatttcctccagagcatcatcactgtacaacctcatagatattcacagcaaggctgttgcatctattgttaacaaggctgaaccactggaagcacacttgatgcaagtgccaatttggagggattctgctgtgtgttctgaaggtagaaagagaagtcattgtgaaaagagtaaatgcattaatatagggcagtcctctggctcgcaatttgaaaattcagtgcattcagaaactagaatcaaatctgagagtgcgtcacattctaatgggggttctggaaatacatttggtaaaggtgttgcaaattttccattagatgcttcggaattggccaacttccttactatggacaggcatataggatttagttgcagtgcacaggttcttctaagatcggtactgacagagaaacaagagctatgtttctcagttgtctcactgttgtggcacaagttacttgcgtctcctgaaacccaacctaccgcagaaagcacttctgctcaacaaggatggcggcaggtcgttgatgcattatgcaacgttgtatcagcaacaccaacgaaagcagccacagcagttgttctacaggcggagagggaattgcagccttggattgccaaagatgatgatcaaggtcagaagatgtggagaatcaaccagaggattgtgaaattgattgtagagttgatgagaattcatgatagcccagaatcattggtaattttgtctagcgcctcagatctacttctgcgtgccactgatgggatgcttgttgatggagaagcttgcactttaccccagctggagctactggaagcaactgctagagcagttaagcctgtgctggagtggggagaatctgggcttgcagtcgcagatggcctttcgaacctgctaaagtgtcgtctgtcagctaccatccgatgcctttctcatcctagtgcacacgttcgagctttgagcgtatcagttcttcgtgatattttgcaagccagttcaattagacctaaccctaatccagtgcaaataaatggtatccatggtccttcctataagtattttaacctagatgttattgattggcaagctgatattgaaaagtgcttgacatgggaagctcatagccgacttgcgaccggaatgcctattaaatttctggatactgctgccaaggaattggtgccctctgtgctggagtggggagaatctgggcttgcagtcgcagatggcctttcgaacctgctaaagtgtcgtctgtcagctaccatccgatgcctttctcatcctagtgcacacgttcgagctttgagcgtatcagttcttcgtgatattttgcaagccagttcaattagacctaaccctaatccagtgcaaataaatggtatccatggtccttcctataagtattttaacctagatgttattgattggcaagctgatattgaaaagtgcttgacatgggaagctcatagccgacttgcgaccggaatgcctattaaatttctggatactgctgccaaggaattgggttgtactatttctgtataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006355 GO:0006950 GO:0006979 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009636 GO:0009637 GO:0009639 GO:0009791 GO:0009889 GO:0009908 GO:0010035 GO:0010218 GO:0010378 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042542 GO:0042752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046677 GO:0048367 GO:0048511 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0080167 GO:0090567 GO:1901700 GO:1903506 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

No domains found.

Protein Analysis

813

Amino Acids

89.72

Weight (kDa)

6.37

Isoelectric Point (pI)

52.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22770
fragaria_vesca	FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030
malus_domestica	MD05G1033400.v1.1 MD10G1034200.v1.1
prunus_persica	Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1
pyrus_communis	pycom05g02420 pycom10g02270
rosa_chinensis	RchiOBHm_Chr6g0274251
rosa_laevigata	RLG00000013569
rosa_multiflora	Rmu_sc0005132.1_g000012 Rmu_sc0007258.1_g000001 Rmu_sc0041613.1_g000001 Rmu_sc0041918.1_g000001
rosa_roxburghii	Rroxscaffold_7G00194400
rosa_rugosa	Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080300 Rorug06G0080400
rosa_samantha	Rh6AG195200 Rh6BG199600 Rh6CG199700 Rh6DG191100
rosa_wichuraiana	Rw6G017080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	1402, 1794, 2142
AccB1I	GGYRCC	2 cut(s)	758, 2074
AccIII	TCCGGA	1 cut(s)	142
AciI	CCGC	8 cut(s)	65, 172, 628, 703, 809, 1377, 1408, 1484
AclI	AACGTT	1 cut(s)	1434
AclWI	GGATC	2 cut(s)	157, 584
AcoI	YGGCCR	2 cut(s)	714, 1224
AcsI	RAATTY	6 cut(s)	894, 1108, 1198, 1587, 2045, 2393
AcuI	CTGAAG	2 cut(s)	692, 1053
AfaI	GTAC	5 cut(s)	113, 537, 920, 1293, 2428
AfiI	CCNNNNNNNGG	8 cut(s)	21, 184, 242, 243, 303, 375, 1240, 1656
AflIII	ACRYGT	2 cut(s)	1840, 2188
AgsI	TTSAA	6 cut(s)	780, 1106, 1893, 1991, 2241, 2339
AhlI	ACTAGT	1 cut(s)	308
AjnI	CCWGG	3 cut(s)	381, 572, 764
AleI	CACNNNNGTG	1 cut(s)	1336
AloI	GAACNNNNNNTCC	2 cut(s)	760, 792
Alw21I	GWGCWC	5 cut(s)	228, 243, 1273, 1840, 2188
Alw26I	GTCTC	4 cut(s)	200, 573, 1333, 1362
Alw44I	GTGCAC	3 cut(s)	1269, 1836, 2184
AlwI	GGATC	2 cut(s)	157, 584
Ama87I	CYCGRG	1 cut(s)	236
Aor13HI	TCCGGA	1 cut(s)	142
AoxI	GGCC	6 cut(s)	99, 378, 714, 1224, 1774, 2122
ApaI	GGGCCC	1 cut(s)	382
ApaLI	GTGCAC	3 cut(s)	1269, 1836, 2184
ApoI	RAATTY	6 cut(s)	894, 1108, 1198, 1587, 2045, 2393
AseI	ATTAAT	1 cut(s)	1074
Asp700I	GAANNNNTTC	1 cut(s)	138
AspLEI	GCGC	3 cut(s)	58, 876, 1628
AspS9I	GGNCC	4 cut(s)	378, 379, 1937, 2285
AsuHPI	GGTGA	1 cut(s)	199
AsuII	TTCGAA	2 cut(s)	1781, 2129
AvaI	CYCGRG	1 cut(s)	236
AvaII	GGWCC	2 cut(s)	1937, 2285
BaeGI	GKGCMC	5 cut(s)	382, 1273, 1840, 2079, 2188
BalI	TGGCCA	2 cut(s)	716, 1226
BanI	GGYRCC	2 cut(s)	758, 2074
BanII	GRGCYC	1 cut(s)	382
BarI	GAAGNNNNNNTAC	4 cut(s)	1851, 1883, 2199, 2231
Bbv12I	GWGCWC	5 cut(s)	228, 243, 1273, 1840, 2188
BceAI	ACGGC	1 cut(s)	114
BcgI	CGANNNNNNTGC	4 cut(s)	2017, 2051, 2365, 2399
BciT130I	CCWGG	3 cut(s)	383, 574, 766
BciVI	GTATCC	4 cut(s)	1940, 2047, 2288, 2395
BclI	TGATCA	1 cut(s)	1522
BcoDI	GTCTC	4 cut(s)	200, 573, 1333, 1362
BcuI	ACTAGT	1 cut(s)	308
BfaI	CTAG	8 cut(s)	309, 1128, 1623, 1719, 1833, 1961, 2181, 2309
BfmI	CTRYAG	1 cut(s)	1478
BfoI	RGCGCY	1 cut(s)	1629
BfuAI	ACCTGC	3 cut(s)	1402, 1794, 2142
BfuI	GTATCC	4 cut(s)	1940, 2047, 2288, 2395
BglII	AGATCT	1 cut(s)	1633
BmcAI	AGTACT	1 cut(s)	113
Bme1390I	CCNGG	3 cut(s)	383, 574, 766
Bme18I	GGWCC	2 cut(s)	1937, 2285
BmeT110I	CYCGRG	1 cut(s)	236
BmgT120I	GGNCC	4 cut(s)	378, 379, 1937, 2285
BmiI	GGNNCC	3 cut(s)	380, 760, 2076
BmrFI	CCNGG	3 cut(s)	383, 574, 766
BmsI	GCATC	9 cut(s)	861, 917, 962, 984, 1201, 1411, 1650, 1808, 2156
BoxI	GACNNNNGTC	1 cut(s)	565
BpmI	CTGGAG	5 cut(s)	787, 886, 1718, 1760, 2108
Bpu14I	TTCGAA	2 cut(s)	1781, 2129
BpuEI	CTTGAG	1 cut(s)	75
BsaBI	GATNNNNATC	1 cut(s)	1521
BsaJI	CCNNGG	7 cut(s)	381, 572, 1502, 1933, 2064, 2281, 2412
BsaWI	WCCGGW	3 cut(s)	142, 2030, 2378
BsaXI	ACNNNNNCTCC	4 cut(s)	716, 746, 760, 790
Bsc4I	CCNNNNNNNGG	8 cut(s)	21, 184, 242, 243, 303, 375, 1240, 1656
Bse1I	ACTGG	6 cut(s)	984, 1710, 1887, 1913, 2235, 2261
Bse8I	GATNNNNATC	1 cut(s)	1521
BseAI	TCCGGA	1 cut(s)	142
BseBI	CCWGG	3 cut(s)	383, 574, 766
BseDI	CCNNGG	7 cut(s)	381, 572, 1502, 1933, 2064, 2281, 2412
BseGI	GGATG	8 cut(s)	11, 232, 1409, 1665, 1812, 1828, 2160, 2176
BseJI	GATNNNNATC	1 cut(s)	1521
BseLI	CCNNNNNNNGG	8 cut(s)	21, 184, 242, 243, 303, 375, 1240, 1656
BseMII	CTCAG	5 cut(s)	147, 174, 1131, 1335, 1644
BseNI	ACTGG	6 cut(s)	984, 1710, 1887, 1913, 2235, 2261
BseRI	GAGGAG	1 cut(s)	34
BseSI	GKGCMC	5 cut(s)	382, 1273, 1840, 2079, 2188
BseYI	CCCAGC	1 cut(s)	1692
BsgI	GTGCAG	2 cut(s)	582, 655
Bsh1285I	CGRYCG	2 cut(s)	2031, 2379
BshFI	GGCC	6 cut(s)	101, 380, 716, 1226, 1776, 2124
BshNI	GGYRCC	2 cut(s)	758, 2074
BsiEI	CGRYCG	2 cut(s)	2031, 2379
BsiHKAI	GWGCWC	5 cut(s)	228, 243, 1273, 1840, 2188
BsiHKCI	CYCGRG	1 cut(s)	236
BsiSI	CCGG	4 cut(s)	143, 663, 2031, 2379
BslI	CCNNNNNNNGG	8 cut(s)	21, 184, 242, 243, 303, 375, 1240, 1656
BsmAI	GTCTC	4 cut(s)	200, 573, 1333, 1362
BsmBI	CGTCTC	2 cut(s)	200, 1362
BsmI	GAATGC	3 cut(s)	1117, 2040, 2388
BsnI	GGCC	6 cut(s)	101, 380, 716, 1226, 1776, 2124
BsoBI	CYCGRG	1 cut(s)	236
Bsp119I	TTCGAA	2 cut(s)	1781, 2129
Bsp120I	GGGCCC	1 cut(s)	378
Bsp1286I	GDGCHC	7 cut(s)	228, 243, 382, 1273, 1840, 2079, 2188
Bsp13I	TCCGGA	1 cut(s)	142
Bsp1407I	TGTACA	1 cut(s)	918
Bsp143I	GATC	6 cut(s)	28, 162, 576, 1286, 1522, 1633
Bsp19I	CCATGG	2 cut(s)	1933, 2281
BspACI	CCGC	8 cut(s)	65, 172, 628, 703, 809, 1377, 1408, 1484
BspANI	GGCC	6 cut(s)	101, 380, 716, 1226, 1776, 2124
BspCNI	CTCAG	5 cut(s)	148, 175, 1132, 1334, 1643
BspEI	TCCGGA	1 cut(s)	142
BspHI	TCATGA	1 cut(s)	1591
BspLI	GGNNCC	3 cut(s)	380, 760, 2076
BspMI	ACCTGC	3 cut(s)	1402, 1794, 2142
BspPI	GGATC	2 cut(s)	157, 584
BspT104I	TTCGAA	2 cut(s)	1781, 2129
BspT107I	GGYRCC	2 cut(s)	758, 2074
BsrGI	TGTACA	1 cut(s)	918
BsrI	ACTGG	6 cut(s)	984, 1710, 1887, 1913, 2235, 2261
BssECI	CCNNGG	7 cut(s)	381, 572, 1502, 1933, 2064, 2281, 2412
BssMI	GATC	6 cut(s)	28, 162, 576, 1286, 1522, 1633
BssT1I	CCWWGG	5 cut(s)	1502, 1933, 2064, 2281, 2412
Bst2UI	CCWGG	3 cut(s)	383, 574, 766
Bst4CI	ACNGT	5 cut(s)	138, 732, 776, 918, 1335
BstAUI	TGTACA	1 cut(s)	918
BstBI	TTCGAA	2 cut(s)	1781, 2129
BstDEI	CTNAG	8 cut(s)	156, 183, 337, 532, 1140, 1283, 1321, 1630
BstDSI	CCRYGG	2 cut(s)	1933, 2281
BstENI	CCTNNNNNAGG	1 cut(s)	301
BstF5I	GGATG	8 cut(s)	11, 232, 1409, 1665, 1812, 1828, 2160, 2176
BstH2I	RGCGCY	1 cut(s)	1629
BstHHI	GCGC	3 cut(s)	58, 876, 1628
BstKTI	GATC	6 cut(s)	31, 165, 579, 1289, 1525, 1636
BstMAI	GTCTC	4 cut(s)	200, 573, 1333, 1362
BstMBI	GATC	6 cut(s)	28, 162, 576, 1286, 1522, 1633
BstMCI	CGRYCG	2 cut(s)	2031, 2379
BstMWI	GCNNNNNNNGC	6 cut(s)	64, 477, 702, 806, 1466, 2083
BstNI	CCWGG	3 cut(s)	383, 574, 766
BstNSI	RCATGY	3 cut(s)	251, 390, 857
BstPAI	GACNNNNGTC	1 cut(s)	565
BstSCI	CCNGG	3 cut(s)	381, 572, 764
BstSFI	CTRYAG	1 cut(s)	1478
BstSLI	GKGCMC	5 cut(s)	382, 1273, 1840, 2079, 2188
BstX2I	RGATCY	1 cut(s)	1633
BstXI	CCANNNNNNTGG	2 cut(s)	2071, 2419
BstYI	RGATCY	1 cut(s)	1633
BsuI	GTATCC	4 cut(s)	1940, 2047, 2288, 2395
BsuRI	GGCC	6 cut(s)	101, 380, 716, 1226, 1776, 2124
BtgI	CCRYGG	2 cut(s)	1933, 2281
BtsCI	GGATG	8 cut(s)	11, 232, 1409, 1665, 1812, 1828, 2160, 2176
BtsI	GCAGTG	4 cut(s)	358, 380, 643, 1273
BveI	ACCTGC	3 cut(s)	1402, 1794, 2142
CciI	TCATGA	1 cut(s)	1591
CfoI	GCGC	3 cut(s)	58, 876, 1628
Cfr13I	GGNCC	4 cut(s)	378, 379, 1937, 2285
CseI	GACGC	4 cut(s)	80, 182, 1137, 1344
Csp6I	GTAC	5 cut(s)	112, 536, 919, 1292, 2427
CspCI	CAANNNNNGTGG	2 cut(s)	1453, 1488
CviQI	GTAC	5 cut(s)	112, 536, 919, 1292, 2427
DdeI	CTNAG	8 cut(s)	156, 183, 337, 532, 1140, 1283, 1321, 1630
DpnI	GATC	6 cut(s)	30, 164, 578, 1288, 1524, 1635
DpnII	GATC	6 cut(s)	28, 162, 576, 1286, 1522, 1633
EaeI	YGGCCR	2 cut(s)	714, 1224
EciI	GGCGGA	1 cut(s)	1499
Eco130I	CCWWGG	5 cut(s)	1502, 1933, 2064, 2281, 2412
Eco24I	GRGCYC	1 cut(s)	382
Eco47I	GGWCC	2 cut(s)	1937, 2285
Eco57I	CTGAAG	2 cut(s)	692, 1053
Eco88I	CYCGRG	1 cut(s)	236
EcoNI	CCTNNNNNAGG	1 cut(s)	301
EcoO109I	RGGNCCY	1 cut(s)	379
EcoRI	GAATTC	1 cut(s)	1587
EcoRII	CCWGG	3 cut(s)	381, 572, 764
EcoT14I	CCWWGG	5 cut(s)	1502, 1933, 2064, 2281, 2412
EcoT22I	ATGCAT	3 cut(s)	855, 1073, 1426
EcoT38I	GRGCYC	1 cut(s)	382
ErhI	CCWWGG	5 cut(s)	1502, 1933, 2064, 2281, 2412
Esp3I	CGTCTC	2 cut(s)	200, 1362
FalI	AAGNNNNNCTT	2 cut(s)	182, 214
FauI	CCCGC	2 cut(s)	72, 710
FbaI	TGATCA	1 cut(s)	1522
FokI	GGATG	7 cut(s)	219, 1416, 1672, 1799, 1815, 2147, 2163
FriOI	GRGCYC	1 cut(s)	382
FspBI	CTAG	8 cut(s)	309, 1128, 1623, 1719, 1833, 1961, 2181, 2309
GlaI	GCGC	3 cut(s)	57, 875, 1627
GsaI	CCCAGC	1 cut(s)	1696
GsuI	CTGGAG	5 cut(s)	787, 886, 1718, 1760, 2108
HaeII	RGCGCY	1 cut(s)	1629
HaeIII	GGCC	6 cut(s)	101, 380, 716, 1226, 1776, 2124
HapII	CCGG	4 cut(s)	143, 663, 2031, 2379
HgaI	GACGC	4 cut(s)	80, 182, 1137, 1344
HhaI	GCGC	3 cut(s)	58, 876, 1628
Hin6I	GCGC	3 cut(s)	56, 874, 1626
HinP1I	GCGC	3 cut(s)	56, 874, 1626
HincII	GTYRAC	1 cut(s)	964
HindII	GTYRAC	1 cut(s)	964
HindIII	AAGCTT	1 cut(s)	1677
HinfI	GANTC	9 cut(s)	405, 500, 515, 1016, 1131, 1545, 1604, 1751, 2099
HpaI	GTTAAC	1 cut(s)	964
HpaII	CCGG	4 cut(s)	143, 663, 2031, 2379
HphI	GGTGA	1 cut(s)	199
Hpy166II	GTNNAC	6 cut(s)	126, 314, 964, 1271, 1838, 2186
Hpy8I	GTNNAC	6 cut(s)	126, 314, 964, 1271, 1838, 2186
HpyAV	CCTTC	4 cut(s)	269, 1028, 1950, 2298
HpyCH4III	ACNGT	5 cut(s)	138, 732, 776, 918, 1335
HpyCH4IV	ACGT	3 cut(s)	1434, 1842, 2190
HpyF10VI	GCNNNNNNNGC	6 cut(s)	64, 477, 702, 806, 1466, 2083
HpyF3I	CTNAG	8 cut(s)	156, 183, 337, 532, 1140, 1283, 1321, 1630
HpySE526I	ACGT	3 cut(s)	1434, 1842, 2190
HspAI	GCGC	3 cut(s)	56, 874, 1626
Kpn2I	TCCGGA	1 cut(s)	142
Ksp22I	TGATCA	1 cut(s)	1522
KspAI	GTTAAC	1 cut(s)	964
Kzo9I	GATC	6 cut(s)	28, 162, 576, 1286, 1522, 1633
LmnI	GCTCC	3 cut(s)	79, 231, 1699
LweI	GCATC	9 cut(s)	861, 917, 962, 984, 1201, 1411, 1650, 1808, 2156
MaeI	CTAG	8 cut(s)	309, 1128, 1623, 1719, 1833, 1961, 2181, 2309
MaeII	ACGT	3 cut(s)	1434, 1842, 2190
MaeIII	GTNAC	5 cut(s)	94, 167, 770, 1149, 1347
MalI	GATC	6 cut(s)	30, 164, 578, 1288, 1524, 1635
MboI	GATC	6 cut(s)	28, 162, 576, 1286, 1522, 1633
MboII	GAAGA	5 cut(s)	741, 1271, 1546, 1859, 2207
MflI	RGATCY	1 cut(s)	1633
MhlI	GDGCHC	7 cut(s)	228, 243, 382, 1273, 1840, 2079, 2188
MlsI	TGGCCA	2 cut(s)	716, 1226
MluNI	TGGCCA	2 cut(s)	716, 1226
MlyI	GAGTC	1 cut(s)	494
Mox20I	TGGCCA	2 cut(s)	716, 1226
Mph1103I	ATGCAT	3 cut(s)	855, 1073, 1426
MroI	TCCGGA	1 cut(s)	142
MroXI	GAANNNNTTC	1 cut(s)	138
MscI	TGGCCA	2 cut(s)	716, 1226
MseI	TTAA	8 cut(s)	410, 963, 1074, 1728, 1956, 2043, 2304, 2391
MslI	CAYNNNNRTG	5 cut(s)	246, 1158, 1336, 1833, 2181
Msp20I	TGGCCA	2 cut(s)	716, 1226
MspA1I	CMGCKG	2 cut(s)	630, 1696
MspI	CCGG	4 cut(s)	143, 663, 2031, 2379
MspR9I	CCNGG	3 cut(s)	383, 574, 766
Mva1269I	GAATGC	3 cut(s)	1117, 2040, 2388
MvaI	CCWGG	3 cut(s)	383, 574, 766
MwoI	GCNNNNNNNGC	6 cut(s)	64, 477, 702, 806, 1466, 2083
NcoI	CCATGG	2 cut(s)	1933, 2281
NdeII	GATC	6 cut(s)	28, 162, 576, 1286, 1522, 1633
NlaIV	GGNNCC	3 cut(s)	380, 760, 2076
NmuCI	GTSAC	2 cut(s)	94, 1149
NsiI	ATGCAT	3 cut(s)	855, 1073, 1426
NspI	RCATGY	3 cut(s)	251, 390, 857
NspV	TTCGAA	2 cut(s)	1781, 2129
OliI	CACNNNNGTG	1 cut(s)	1336
PaeI	GCATGC	2 cut(s)	251, 857
PagI	TCATGA	1 cut(s)	1591
PctI	GAATGC	3 cut(s)	1117, 2040, 2388
PdmI	GAANNNNTTC	1 cut(s)	138
PfeI	GAWTC	8 cut(s)	405, 515, 1016, 1131, 1545, 1604, 1751, 2099
PfoI	TCCNGGA	1 cut(s)	764
PleI	GAGTC	1 cut(s)	494
PpsI	GAGTC	1 cut(s)	494
PshAI	GACNNNNGTC	1 cut(s)	565
PshBI	ATTAAT	1 cut(s)	1074
Psp1406I	AACGTT	1 cut(s)	1434
Psp6I	CCWGG	3 cut(s)	381, 572, 764
PspFI	CCCAGC	1 cut(s)	1692
PspGI	CCWGG	3 cut(s)	381, 572, 764
PspN4I	GGNNCC	3 cut(s)	380, 760, 2076
PspOMI	GGGCCC	1 cut(s)	378
PspPI	GGNCC	4 cut(s)	378, 379, 1937, 2285
PsuI	RGATCY	1 cut(s)	1633
PvuII	CAGCTG	1 cut(s)	1696
RsaI	GTAC	5 cut(s)	113, 537, 920, 1293, 2428
RsaNI	GTAC	5 cut(s)	112, 536, 919, 1292, 2427
RseI	CAYNNNNRTG	5 cut(s)	246, 1158, 1336, 1833, 2181
SaqAI	TTAA	8 cut(s)	410, 963, 1074, 1728, 1956, 2043, 2304, 2391
Sau3AI	GATC	6 cut(s)	28, 162, 576, 1286, 1522, 1633
Sau96I	GGNCC	4 cut(s)	378, 379, 1937, 2285
ScaI	AGTACT	1 cut(s)	113
SchI	GAGTC	1 cut(s)	494
ScrFI	CCNGG	3 cut(s)	383, 574, 766
SduI	GDGCHC	7 cut(s)	228, 243, 382, 1273, 1840, 2079, 2188
SfaNI	GCATC	9 cut(s)	861, 917, 962, 984, 1201, 1411, 1650, 1808, 2156
SfcI	CTRYAG	1 cut(s)	1478
SfuI	TTCGAA	2 cut(s)	1781, 2129
SinI	GGWCC	2 cut(s)	1937, 2285
SmiMI	CAYNNNNRTG	5 cut(s)	246, 1158, 1336, 1833, 2181
SmlI	CTYRAG	1 cut(s)	90
SmoI	CTYRAG	1 cut(s)	90
SpeI	ACTAGT	1 cut(s)	308
SphI	GCATGC	2 cut(s)	251, 857
SsiI	CCGC	8 cut(s)	65, 172, 628, 703, 809, 1377, 1408, 1484
SspI	AATATT	1 cut(s)	711
SspMI	CTAG	8 cut(s)	309, 1128, 1623, 1719, 1833, 1961, 2181, 2309
StyD4I	CCNGG	3 cut(s)	381, 572, 764
StyI	CCWWGG	5 cut(s)	1502, 1933, 2064, 2281, 2412
TaaI	ACNGT	5 cut(s)	138, 732, 776, 918, 1335
TaiI	ACGT	3 cut(s)	1437, 1845, 2193
TaqI	TCGA	4 cut(s)	1781, 1846, 2129, 2194
TatI	WGTACW	4 cut(s)	111, 535, 918, 2426
TauI	GCSGC	2 cut(s)	812, 1411
TfiI	GAWTC	8 cut(s)	405, 515, 1016, 1131, 1545, 1604, 1751, 2099
Tru1I	TTAA	8 cut(s)	410, 963, 1074, 1728, 1956, 2043, 2304, 2391
Tru9I	TTAA	8 cut(s)	410, 963, 1074, 1728, 1956, 2043, 2304, 2391
TseFI	GTSAC	2 cut(s)	94, 1149
Tsp45I	GTSAC	2 cut(s)	94, 1149
TspDTI	ATGAA	5 cut(s)	261, 315, 319, 906, 1580
TspGWI	ACGGA	1 cut(s)	155
VneI	GTGCAC	3 cut(s)	1269, 1836, 2184
VpaK11BI	GGWCC	2 cut(s)	1937, 2285
VspI	ATTAAT	1 cut(s)	1074
XagI	CCTNNNNNAGG	1 cut(s)	301
XapI	RAATTY	6 cut(s)	894, 1108, 1198, 1587, 2045, 2393
XceI	RCATGY	3 cut(s)	251, 390, 857
XmnI	GAANNNNTTC	1 cut(s)	138
XspI	CTAG	8 cut(s)	309, 1128, 1623, 1719, 1833, 1961, 2181, 2309
ZrmI	AGTACT	1 cut(s)	113
Zsp2I	ATGCAT	3 cut(s)	855, 1073, 1426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.