Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0003857

Physical Location & Seq

Genomic Coordinates Forward (+)

11426260 .. 11437133

Gene Structure 10874 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g13030.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3537 bp

ATGGCTTGTTCATCAGAAAGATGGATTGATCGACTCCAATTCTCCTCATTGTTTGGGCCTCCCCCTCAAGATGCTCCACGACGAAAGGCTCAAATCACGGCCTATGTGGAGTACTTCGGTCAGTTTACATCAGAACAATTTCCAGAGGATATTTCTGAGCTGATCCGTAACCGCTACCCTTCCGAGGTGAAGCGTCTCTTTGATGATGTGTTAGCTATGTTTGTCCTTCATCATCCTGAGCATGGGCATGCTGTTGTCCTTCCCATTATTTCATGCATCATTGATGGCACTCTGCCCTATGAAAGGACTAGTCCACCATTTGCTTCTTTCATATCATTAGTCTGCCCCAGTAGCGAGAAGGAGTACTCTGAGCAGTGGGCTCTGGCATGTGGGGAGATTTTACGAATCTTAACTCATTACAATCGCCCAATATACAAGGTTGAACAACAGAATAGTGAGACAGAGAGAAGCAGTAGTGGCAGCCATGCTACAACAAGTGATTCTGTTGATGGTGAATCCAGTCATGTACCATCAGTACAGCAAGAGAGGAAACCTATACGACCTTTGTCTCCCTGGATTACTGATATATTGCTTGCTGCACCTCTGGGTATTAGAAGTGATTATTTCCGCTGGTGCAGTGGAGTTATGGGAAAATATGCTGCGGGAGAACTGAAGCCTCCGTCAACTGCTTCTTCTCGTGGATCTGGAAAACATCCTCAACTCATGCCATCCACTCCAAGGTGGGCTGTTGCAAATGGTGCTGGAGTTATATTAAGTGTTTGTGATGAAGAAGTTTCTCGTTATGAAACTGCTACATTAACAGCAGTAGCTGTCCCTGCACTTCTACTTCCTCCTCCAACAACAGCTTTAGATGAGCATCTAGTGGCTGGGCTACCAGCTCTTGAGCCATATGCACGTTTATTTCACAGGTATTATGCTATTGCTACTCCAAGTGCTACCCAAAGACTTCTTCTTGGACTTCTAGAAGCACCGCCATCATGGGCACCCGATGCTCTTGATGCAGCTGTACAGCTTGTGGAGCTTCTTCGCGCTGCTGAAGATTATGCATCTGGAATACGGCTTCCACGGAACTGGATGCATTTGCATTTCTTGCGAGCAATTGGGACTGCAATGTCCATGAGAGCCGGTATAGCAGCTGATGCTGCAGCAGCTTTACTTTTCCGGATACTCTCTCAACCTGCATTGCTTTTTCCTCCACTAAGACAAGTTGAGGGAGTTGAAGTTCAACATGAGCCTATGGGTAGCCGTGTCTCAAGCTACAGGAAGCAGATAGAAGTTCCTGCGGCTGAAGCAACAATTGAAGCTACTGCCCAAGGGATTGCTTCTATGCTTTGTGCCCATGGACCTGAGGTTGAATGGAGAATCTGTACTATATGGGAAGCTGCCTATGGTCTAATTCCTTTAAGTTCCTCAGCAGTTGACCTTCCTGAGATCATTGTTGCAACTCCATTGCAGCCTCCAATATTATCCTGGAATCTGTATATACCCCTACTTAAGGTCTTGGAATACCTTCCTCGTGGAAGTCCTTCTGAAGCATGTCTTATGAAGATATTTGTTGCCACAGTTGAAGCGATTCTTCAAAGGACATTTCCACCTGAGTCCTCAAGAGAGCAGAACAGAAAAACAAGATACCTTTTTGGCATAGGGTCTGCCTCAAAAAACCTGGCTGTGGCAGAGCTTCGGACAATGGTTCATTCACTGTTCTTAGAATCATGTGCATCTGTAGAGCTTGCTTCACGTCTATTGTTTGTTGTGTTAACTGTATGCGTTAGTCATGAAGCTCAGTCCAGTGGGAGTAAGAAAGCACGAGTTGAAGAAAGCTACCCACTTGAGGAATGTGTTGAGGAATCACGAGAAATGTCTGGAAAACAGGGAGACAGAAAAAAAACCAAAAAACAAGGACCTGTAGCAGCATTTGACTCTTATGTTCTAGCCGCTGTTTGTGCTCTTGCCTGTGAGCTTCAGTTGTTCCCTTTGGTTTCAAGGGGGAGCAACCAATCACACTCAAAAGATGCTAAAAATATTGCAAAGCCTGCAAAACCAATTGGGTCTGCCAATTCTTACAAACAAATAAATGGATCTTCTAATGAGTTTCAAAGTAGCGTGGACTCAGCAATTTGCCACACGCGCAGAATATTGGTCATTTTGGAGGCATTGTTTTTGCTGAAGCCATCTTCTGTTGGCACCTCCTGGAGTTACAGTTCAAATGAGATTGTTGCCGCAGCTATGGTTGCCGCTCATGTATCTGAATTATTTAGATGGTCAAAGGCTTGCATGCATGCACTCTGTGTTTTAATGCGCTGCAAGTGGGATAATGAAATTTCATCTAGAGCATCATCACTGTATAACCTCATTGATATTCACAGCAAGGCTGTTGCATCGATTGTTAACAAGGCTGAACCACTGGAAGCACACTTGATGCAAGTGCCGATTTGGAGGGATTCTTTAGTGTGTTCTGAAGGTAGAAAGCTAAGTCGATGTGAAAAGAGTAAATGCATTAATGTTGGACAGTCATCTGTCTCGCAATATGAGGGTTCAGCGTATTCAGAAACTAGAGTCAAATCTGTGACGCCGTCACATTCTAATGGTGGTTCCGGAACATTTGGTAAAGGTCTTGCAAACTTACCATTAGATGCCTCGGAATTGGCCAACTTCCTTACTATGGACAGGCATATAGGATTTAGTTGCAGCGCACAGGTTCTTCTAAGAACGGTACTGACAGAGAAACAAGAGCTATGTTTTTCAGTTGTCTCACTGTTGTGGCACAAGTTAATTGCGTCTCCTGAAACCCAACCTACTGCAGAAAGCACTTCTGCTCAACAAGGGTGGCGGCAGGTTGTTGATGCATTATGCAACGTTGTATCTGCAACACCAACTAAAGCAGCCACAGCAGTTGTTCTTCAGGCGGAGAGGGAATTGCAGCCTTGGATTGCCAAAGATGATGATCAAGGTCAGAAGATGTGGAGAATCAACCAGAGGATTGTGAAATTGATTGTAGAGTTGATGAGAATTCATGATAGCCCAGAATCATTGGTAATTTTGTCTAGTGCGTCAGATCTACTTCTGCGTGCCACTGATGGGATGCTTGTTGATGGAGAAGCTTGCACTTTACCGCAGCTGGAGCTACTGGAAGCAACTGCGAGAGCAGTTAAGCCTGTGCTGGAGTGGGGAGAATCTGGGCTTGCAGTTGCAGATGGCCTTTCAAACCTGTTAAAGTGTCGTCTGTCAGCTACTATCCGATGCCTTTCTCATCCTAGTGCTCATGTTCGCGCTTTGAGCGTATCAGTTCTTCGTGATATTTTGCAAACCAGTTCAGTTAGACCTAACCCTAATCCAGTGCAAATAAATGGTATCCATGGTCCTTCCTATAAGTATTTTAACTTAGATGTTATTGATTGGCAAGCTGATATTGAAAAGTGCCTGACATGGGAAGCTCACAGCCGACTTGCAACTGGAATGCCTATTAAATTTCTTGATACTGCTGCCAAGGAATTGGGTTGTACTATTTCTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006355 GO:0006950 GO:0006979 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009636 GO:0009637 GO:0009639 GO:0009791 GO:0009889 GO:0009908 GO:0010035 GO:0010218 GO:0010378 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042542 GO:0042752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046677 GO:0048367 GO:0048511 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0080167 GO:0090567 GO:1901700 GO:1903506 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1179

Amino Acids

129.05

Weight (kDa)

6.46

Isoelectric Point (pI)

53.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22770
fragaria_vesca	FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030
malus_domestica	MD05G1033400.v1.1 MD10G1034200.v1.1
prunus_persica	Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1
pyrus_communis	pycom05g02420 pycom10g02270
rosa_chinensis	RchiOBHm_Chr6g0274251
rosa_laevigata	RLG00000013569
rosa_multiflora	Rmu_sc0005132.1_g000012 Rmu_sc0007258.1_g000001 Rmu_sc0041613.1_g000001 Rmu_sc0041918.1_g000001
rosa_roxburghii	Rroxscaffold_7G00194400
rosa_rugosa	Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080300 Rorug06G0080400
rosa_samantha	Rh6AG195200 Rh6BG199600 Rh6CG199700 Rh6DG191100
rosa_wichuraiana	Rw6G017080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1132
Acc36I	ACCTGC	2 cut(s)	1207, 2845
AccB1I	GGYRCC	2 cut(s)	1003, 2204
AccBSI	CCGCTC	1 cut(s)	2258
AccII	CGCG	3 cut(s)	1050, 2149, 3291
AccIII	TCCGGA	2 cut(s)	1182, 2615
AclI	AACGTT	1 cut(s)	2877
AclWI	GGATC	3 cut(s)	157, 709, 2107
AcoI	YGGCCR	1 cut(s)	2667
AcsI	RAATTY	3 cut(s)	2340, 3030, 3488
AcuI	CTGAAG	8 cut(s)	692, 1077, 1329, 1572, 1967, 2207, 2499, 2906
AcyI	GRCGYC	1 cut(s)	2591
AdeI	CACNNNGTG	1 cut(s)	2309
AfaI	GTAC	8 cut(s)	113, 365, 528, 537, 1029, 1390, 2736, 3523
AflII	CTTAAG	1 cut(s)	1514
AhlI	ACTAGT	1 cut(s)	308
AjiI	CACGTC	1 cut(s)	1760
AjnI	CCWGG	4 cut(s)	572, 1490, 1683, 2210
AjuI	GAANNNNNNNTTGG	2 cut(s)	954, 986
AleI	CACNNNNGTG	1 cut(s)	2779
AloI	GAACNNNNNNTCC	4 cut(s)	1227, 1259, 2206, 2238
Alw21I	GWGCWC	2 cut(s)	1969, 3283
Alw26I	GTCTC	8 cut(s)	200, 452, 573, 1276, 1890, 2545, 2776, 2805
AlwI	GGATC	3 cut(s)	157, 709, 2107
AlwNI	CAGNNNCTG	1 cut(s)	830
Aor13HI	TCCGGA	2 cut(s)	1182, 2615
AoxI	GGCC	4 cut(s)	56, 99, 2667, 3217
ApoI	RAATTY	3 cut(s)	2340, 3030, 3488
AseI	ATTAAT	1 cut(s)	2520
Asp700I	GAANNNNTTC	4 cut(s)	138, 1530, 1546, 1593
AspLEI	GCGC	5 cut(s)	1052, 2151, 2322, 2714, 3293
AspS9I	GGNCC	4 cut(s)	56, 1364, 1922, 3380
AsuHPI	GGTGA	2 cut(s)	199, 524
AvaII	GGWCC	3 cut(s)	1364, 1922, 3380
AxyI	CCTNAGG	1 cut(s)	1368
BaeGI	GKGCMC	2 cut(s)	1006, 1360
BalI	TGGCCA	1 cut(s)	2669
BanI	GGYRCC	2 cut(s)	1003, 2204
BanII	GRGCYC	1 cut(s)	382
BarI	GAAGNNNNNNTAC	2 cut(s)	3294, 3326
BauI	CACGAG	4 cut(s)	696, 1536, 1827, 1872
Bbv12I	GWGCWC	2 cut(s)	1969, 3283
BbvCI	CCTCAGC	1 cut(s)	1432
BceAI	ACGGC	4 cut(s)	114, 1094, 1251, 2578
BciT130I	CCWGG	4 cut(s)	574, 1492, 1685, 2212
BciVI	GTATCC	2 cut(s)	1179, 3383
BclI	TGATCA	1 cut(s)	2965
BcoDI	GTCTC	8 cut(s)	200, 452, 573, 1276, 1890, 2545, 2776, 2805
BcuI	ACTAGT	1 cut(s)	308
BfaI	CTAG	8 cut(s)	309, 881, 983, 1952, 2349, 2574, 3066, 3276
BfmI	CTRYAG	5 cut(s)	1164, 1279, 1743, 1926, 2820
BfrI	CTTAAG	1 cut(s)	1514
BfuAI	ACCTGC	2 cut(s)	1207, 2845
BfuI	GTATCC	2 cut(s)	1179, 3383
BglII	AGATCT	1 cut(s)	3076
BmcAI	AGTACT	2 cut(s)	113, 365
Bme1390I	CCNGG	4 cut(s)	574, 1492, 1685, 2212
Bme18I	GGWCC	3 cut(s)	1364, 1922, 3380
BmgBI	CACGTC	1 cut(s)	1760
BmgT120I	GGNCC	4 cut(s)	56, 1364, 1922, 3380
BmiI	GGNNCC	3 cut(s)	1005, 2206, 2614
BmrFI	CCNGG	4 cut(s)	574, 1492, 1685, 2212
BmrI	ACTGGG	1 cut(s)	342
BmuI	ACTGGG	1 cut(s)	342
BoxI	GACNNNNGTC	1 cut(s)	565
BpmI	CTGGAG	4 cut(s)	783, 2233, 3161, 3203
Bpu10I	CCTNAGC	2 cut(s)	237, 1432
BpuEI	CTTGAG	5 cut(s)	51, 923, 1258, 1609, 1871
Bsa29I	ATCGAT	1 cut(s)	2402
BsaBI	GATNNNNATC	2 cut(s)	876, 2964
BsaHI	GRCGYC	1 cut(s)	2591
BsaWI	WCCGGW	2 cut(s)	1182, 2615
BsaXI	ACNNNNNCTCC	8 cut(s)	1227, 1257, 1372, 1402, 2162, 2192, 2206, 2236
Bse118I	RCCGGY	1 cut(s)	1145
Bse1I	ACTGG	9 cut(s)	348, 519, 1097, 1809, 2430, 3153, 3330, 3356, 3478
Bse21I	CCTNAGG	1 cut(s)	1368
Bse3DI	GCAATG	3 cut(s)	1137, 1202, 1469
Bse8I	GATNNNNATC	2 cut(s)	876, 2964
BseAI	TCCGGA	2 cut(s)	1182, 2615
BseBI	CCWGG	4 cut(s)	574, 1492, 1685, 2212
BseCI	ATCGAT	1 cut(s)	2402
BseGI	GGATG	6 cut(s)	232, 712, 728, 1101, 3108, 3271
BseJI	GATNNNNATC	2 cut(s)	876, 2964
BseMI	GCAATG	3 cut(s)	1137, 1202, 1469
BseMII	CTCAG	9 cut(s)	147, 228, 360, 1359, 1440, 1446, 1608, 1817, 2145
BseNI	ACTGG	9 cut(s)	348, 519, 1097, 1809, 2430, 3153, 3330, 3356, 3478
BseRI	GAGGAG	2 cut(s)	34, 843
BseSI	GKGCMC	2 cut(s)	1006, 1360
BseYI	CCCAGC	1 cut(s)	887
BsgI	GTGCAG	3 cut(s)	582, 655, 822
Bsh1236I	CGCG	3 cut(s)	1050, 2149, 3291
BshFI	GGCC	4 cut(s)	58, 101, 2669, 3219
BshNI	GGYRCC	2 cut(s)	1003, 2204
BshVI	ATCGAT	1 cut(s)	2402
BsiHKAI	GWGCWC	2 cut(s)	1969, 3283
BsiSI	CCGG	3 cut(s)	1146, 1183, 2616
BslFI	GGGAC	2 cut(s)	818, 1138
BsmAI	GTCTC	8 cut(s)	200, 452, 573, 1276, 1890, 2545, 2776, 2805
BsmBI	CGTCTC	2 cut(s)	200, 2805
BsmFI	GGGAC	2 cut(s)	818, 1138
BsmI	GAATGC	1 cut(s)	3483
BsnI	GGCC	4 cut(s)	58, 101, 2669, 3219
Bsp1286I	GDGCHC	5 cut(s)	382, 1006, 1360, 1969, 3283
Bsp13I	TCCGGA	2 cut(s)	1182, 2615
Bsp1407I	TGTACA	1 cut(s)	1027
Bsp143I	GATC	7 cut(s)	28, 162, 701, 1452, 2099, 2965, 3076
Bsp19I	CCATGG	2 cut(s)	1360, 3376
BspANI	GGCC	4 cut(s)	58, 101, 2669, 3219
BspCNI	CTCAG	9 cut(s)	148, 229, 361, 1360, 1441, 1445, 1609, 1816, 2144
BspDI	ATCGAT	1 cut(s)	2402
BspEI	TCCGGA	2 cut(s)	1182, 2615
BspFNI	CGCG	3 cut(s)	1050, 2149, 3291
BspHI	TCATGA	2 cut(s)	1795, 3034
BspLI	GGNNCC	3 cut(s)	1005, 2206, 2614
BspMAI	CTGCAG	2 cut(s)	1168, 2824
BspMI	ACCTGC	2 cut(s)	1207, 2845
BspPI	GGATC	3 cut(s)	157, 709, 2107
BspT107I	GGYRCC	2 cut(s)	1003, 2204
BspTI	CTTAAG	1 cut(s)	1514
BsrBI	CCGCTC	1 cut(s)	2258
BsrDI	GCAATG	3 cut(s)	1137, 1202, 1469
BsrFI	RCCGGY	1 cut(s)	1145
BsrGI	TGTACA	1 cut(s)	1027
BsrI	ACTGG	9 cut(s)	348, 519, 1097, 1809, 2430, 3153, 3330, 3356, 3478
BssAI	RCCGGY	1 cut(s)	1145
BssMI	GATC	7 cut(s)	28, 162, 701, 1452, 2099, 2965, 3076
BssNI	GRCGYC	1 cut(s)	2591
BssSI	CACGAG	4 cut(s)	696, 1536, 1827, 1872
BssT1I	CCWWGG	6 cut(s)	737, 1333, 1360, 2945, 3376, 3507
Bst2BI	CACGAG	4 cut(s)	696, 1536, 1827, 1872
Bst2UI	CCWGG	4 cut(s)	574, 1492, 1685, 2212
Bst4CI	ACNGT	8 cut(s)	1585, 1722, 1783, 2222, 2364, 2532, 2734, 2778
BstACI	GRCGYC	1 cut(s)	2591
BstAFI	CTTAAG	1 cut(s)	1514
BstAPI	GCANNNNNTGC	5 cut(s)	758, 1010, 1111, 1160, 2054
BstAUI	TGTACA	1 cut(s)	1027
BstDSI	CCRYGG	3 cut(s)	1085, 1360, 3376
BstENI	CCTNNNNNAGG	2 cut(s)	301, 1514
BstF5I	GGATG	6 cut(s)	232, 712, 728, 1101, 3108, 3271
BstFNI	CGCG	3 cut(s)	1050, 2149, 3291
BstHHI	GCGC	5 cut(s)	1052, 2151, 2322, 2714, 3293
BstKTI	GATC	7 cut(s)	31, 165, 704, 1455, 2102, 2968, 3079
BstMAI	GTCTC	8 cut(s)	200, 452, 573, 1276, 1890, 2545, 2776, 2805
BstMBI	GATC	7 cut(s)	28, 162, 701, 1452, 2099, 2965, 3076
BstNI	CCWGG	4 cut(s)	574, 1492, 1685, 2212
BstNSI	RCATGY	5 cut(s)	251, 390, 1560, 2299, 2303
BstPAI	GACNNNNGTC	1 cut(s)	565
BstSCI	CCNGG	4 cut(s)	572, 1490, 1683, 2210
BstSFI	CTRYAG	5 cut(s)	1164, 1279, 1743, 1926, 2820
BstSLI	GKGCMC	2 cut(s)	1006, 1360
BstUI	CGCG	3 cut(s)	1050, 2149, 3291
BstX2I	RGATCY	3 cut(s)	701, 2099, 3076
BstXI	CCANNNNNNTGG	2 cut(s)	1092, 3514
BstYI	RGATCY	3 cut(s)	701, 2099, 3076
Bsu15I	ATCGAT	1 cut(s)	2402
Bsu36I	CCTNAGG	1 cut(s)	1368
BsuI	GTATCC	2 cut(s)	1179, 3383
BsuRI	GGCC	4 cut(s)	58, 101, 2669, 3219
BsuTUI	ATCGAT	1 cut(s)	2402
BtgI	CCRYGG	3 cut(s)	1085, 1360, 3376
BtrI	CACGTC	1 cut(s)	1760
BtsCI	GGATG	6 cut(s)	232, 712, 728, 1101, 3108, 3271
BtsI	GCAGTG	2 cut(s)	380, 643
BtsIMutI	CAGTG	9 cut(s)	380, 643, 1718, 1816, 2360, 2423, 2774, 3093, 3363
BveI	ACCTGC	2 cut(s)	1207, 2845
CaiI	CAGNNNCTG	1 cut(s)	830
CciI	TCATGA	2 cut(s)	1795, 3034
CfoI	GCGC	5 cut(s)	1052, 2151, 2322, 2714, 3293
Cfr10I	RCCGGY	1 cut(s)	1145
Cfr13I	GGNCC	4 cut(s)	56, 1364, 1922, 3380
ClaI	ATCGAT	1 cut(s)	2402
CseI	GACGC	4 cut(s)	182, 2599, 2787, 3060
Csp6I	GTAC	8 cut(s)	112, 364, 527, 536, 1028, 1389, 2735, 3522
CspCI	CAANNNNNGTGG	4 cut(s)	2828, 2863, 2896, 2931
CviQI	GTAC	8 cut(s)	112, 364, 527, 536, 1028, 1389, 2735, 3522
DpnI	GATC	7 cut(s)	30, 164, 703, 1454, 2101, 2967, 3078
DpnII	GATC	7 cut(s)	28, 162, 701, 1452, 2099, 2965, 3076
DraIII	CACNNNGTG	1 cut(s)	2309
DrdI	GACNNNNNNGTC	1 cut(s)	1132
DseDI	GACNNNNNNGTC	1 cut(s)	1132
EaeI	YGGCCR	1 cut(s)	2667
EciI	GGCGGA	1 cut(s)	2942
Eco130I	CCWWGG	6 cut(s)	737, 1333, 1360, 2945, 3376, 3507
Eco24I	GRGCYC	1 cut(s)	382
Eco47I	GGWCC	3 cut(s)	1364, 1922, 3380
Eco57I	CTGAAG	8 cut(s)	692, 1077, 1329, 1572, 1967, 2207, 2499, 2906
Eco81I	CCTNAGG	1 cut(s)	1368
EcoNI	CCTNNNNNAGG	2 cut(s)	301, 1514
EcoO109I	RGGNCCY	1 cut(s)	1922
EcoRI	GAATTC	1 cut(s)	3030
EcoRII	CCWGG	4 cut(s)	572, 1490, 1683, 2210
EcoT14I	CCWWGG	6 cut(s)	737, 1333, 1360, 2945, 3376, 3507
EcoT22I	ATGCAT	6 cut(s)	278, 1069, 1101, 2301, 2519, 2869
EcoT38I	GRGCYC	1 cut(s)	382
ErhI	CCWWGG	6 cut(s)	737, 1333, 1360, 2945, 3376, 3507
Esp3I	CGTCTC	2 cut(s)	200, 2805
FalI	AAGNNNNNCTT	6 cut(s)	182, 214, 1545, 1577, 1581, 1613
FaqI	GGGAC	2 cut(s)	818, 1138
FauI	CCCGC	1 cut(s)	655
FauNDI	CATATG	1 cut(s)	910
FbaI	TGATCA	1 cut(s)	2965
FokI	GGATG	6 cut(s)	219, 699, 715, 1108, 3115, 3258
FriOI	GRGCYC	1 cut(s)	382
FspBI	CTAG	8 cut(s)	309, 881, 983, 1952, 2349, 2574, 3066, 3276
GlaI	GCGC	5 cut(s)	1051, 2150, 2321, 2713, 3292
GsaI	CCCAGC	1 cut(s)	891
GsuI	CTGGAG	4 cut(s)	783, 2233, 3161, 3203
HaeIII	GGCC	4 cut(s)	58, 101, 2669, 3219
HapII	CCGG	3 cut(s)	1146, 1183, 2616
HgaI	GACGC	4 cut(s)	182, 2599, 2787, 3060
HhaI	GCGC	5 cut(s)	1052, 2151, 2322, 2714, 3293
Hin1I	GRCGYC	1 cut(s)	2591
Hin6I	GCGC	5 cut(s)	1050, 2149, 2320, 2712, 3291
HinP1I	GCGC	5 cut(s)	1050, 2149, 2320, 2712, 3291
HincII	GTYRAC	4 cut(s)	684, 1441, 1779, 2410
HindII	GTYRAC	4 cut(s)	684, 1441, 1779, 2410
HindIII	AAGCTT	1 cut(s)	3120
HpaI	GTTAAC	2 cut(s)	1779, 2410
HpaII	CCGG	3 cut(s)	1146, 1183, 2616
HphI	GGTGA	2 cut(s)	199, 524
Hpy166II	GTNNAC	7 cut(s)	126, 314, 684, 1441, 1779, 2128, 2410
Hpy8I	GTNNAC	7 cut(s)	126, 314, 684, 1441, 1779, 2128, 2410
Hpy99I	CGWCG	1 cut(s)	84
HpyAV	CCTTC	9 cut(s)	189, 236, 269, 352, 1454, 1541, 1557, 2474, 3393
HpyCH4III	ACNGT	8 cut(s)	1585, 1722, 1783, 2222, 2364, 2532, 2734, 2778
HpyCH4IV	ACGT	3 cut(s)	916, 1759, 2877
HpySE526I	ACGT	3 cut(s)	916, 1759, 2877
Hsp92I	GRCGYC	1 cut(s)	2591
HspAI	GCGC	5 cut(s)	1050, 2149, 2320, 2712, 3291
Kpn2I	TCCGGA	2 cut(s)	1182, 2615
Ksp22I	TGATCA	1 cut(s)	2965
KspAI	GTTAAC	2 cut(s)	1779, 2410
Kzo9I	GATC	7 cut(s)	28, 162, 701, 1452, 2099, 2965, 3076
LmnI	GCTCC	4 cut(s)	79, 1039, 2010, 3142
MaeI	CTAG	8 cut(s)	309, 881, 983, 1952, 2349, 2574, 3066, 3276
MaeII	ACGT	3 cut(s)	916, 1759, 2877
MaeIII	GTNAC	4 cut(s)	167, 2216, 2587, 2595
MalI	GATC	7 cut(s)	30, 164, 703, 1454, 2101, 2967, 3078
MbiI	CCGCTC	1 cut(s)	2258
MboI	GATC	7 cut(s)	28, 162, 701, 1452, 2099, 2965, 3076
MfeI	CAATTG	3 cut(s)	1119, 1317, 2064
MflI	RGATCY	3 cut(s)	701, 2099, 3076
MhlI	GDGCHC	5 cut(s)	382, 1006, 1360, 1969, 3283
MlsI	TGGCCA	1 cut(s)	2669
MluNI	TGGCCA	1 cut(s)	2669
MlyI	GAGTC	5 cut(s)	27, 1628, 1934, 2123, 2586
MmeI	TCCRAC	2 cut(s)	881, 2506
Mox20I	TGGCCA	1 cut(s)	2669
Mph1103I	ATGCAT	6 cut(s)	278, 1069, 1101, 2301, 2519, 2869
MroI	TCCGGA	2 cut(s)	1182, 2615
MroXI	GAANNNNTTC	4 cut(s)	138, 1530, 1546, 1593
MscI	TGGCCA	1 cut(s)	2669
MslI	CAYNNNNRTG	4 cut(s)	246, 2604, 2779, 3276
Msp20I	TGGCCA	1 cut(s)	2669
MspA1I	CMGCKG	5 cut(s)	630, 1025, 1157, 1958, 3139
MspCI	CTTAAG	1 cut(s)	1514
MspI	CCGG	3 cut(s)	1146, 1183, 2616
MspR9I	CCNGG	4 cut(s)	574, 1492, 1685, 2212
MunI	CAATTG	3 cut(s)	1119, 1317, 2064
Mva1269I	GAATGC	1 cut(s)	3483
MvaI	CCWGG	4 cut(s)	574, 1492, 1685, 2212
MvnI	CGCG	3 cut(s)	1050, 2149, 3291
NcoI	CCATGG	2 cut(s)	1360, 3376
NdeI	CATATG	1 cut(s)	910
NdeII	GATC	7 cut(s)	28, 162, 701, 1452, 2099, 2965, 3076
NlaIV	GGNNCC	3 cut(s)	1005, 2206, 2614
NmuCI	GTSAC	2 cut(s)	2587, 2595
NsiI	ATGCAT	6 cut(s)	278, 1069, 1101, 2301, 2519, 2869
NspI	RCATGY	5 cut(s)	251, 390, 1560, 2299, 2303
OliI	CACNNNNGTG	1 cut(s)	2779
PaeI	GCATGC	3 cut(s)	251, 2299, 2303
PagI	TCATGA	2 cut(s)	1795, 3034
PctI	GAATGC	1 cut(s)	3483
PdmI	GAANNNNTTC	4 cut(s)	138, 1530, 1546, 1593
PflFI	GACNNNGTC	1 cut(s)	2593
PfoI	TCCNGGA	2 cut(s)	1490, 2210
PleI	GAGTC	5 cut(s)	27, 1627, 1934, 2123, 2585
PpsI	GAGTC	5 cut(s)	27, 1627, 1934, 2123, 2585
PpuMI	RGGWCCY	1 cut(s)	1922
PshAI	GACNNNNGTC	1 cut(s)	565
PshBI	ATTAAT	1 cut(s)	2520
Psp1406I	AACGTT	1 cut(s)	2877
Psp5II	RGGWCCY	1 cut(s)	1922
Psp6I	CCWGG	4 cut(s)	572, 1490, 1683, 2210
PspFI	CCCAGC	1 cut(s)	887
PspGI	CCWGG	4 cut(s)	572, 1490, 1683, 2210
PspN4I	GGNNCC	3 cut(s)	1005, 2206, 2614
PspPI	GGNCC	4 cut(s)	56, 1364, 1922, 3380
PspPPI	RGGWCCY	1 cut(s)	1922
PstI	CTGCAG	2 cut(s)	1168, 2824
PstNI	CAGNNNCTG	1 cut(s)	830
PsuI	RGATCY	3 cut(s)	701, 2099, 3076
PsyI	GACNNNGTC	1 cut(s)	2593
PvuII	CAGCTG	3 cut(s)	1025, 1157, 3139
RsaI	GTAC	8 cut(s)	113, 365, 528, 537, 1029, 1390, 2736, 3523
RsaNI	GTAC	8 cut(s)	112, 364, 527, 536, 1028, 1389, 2735, 3522
RseI	CAYNNNNRTG	4 cut(s)	246, 2604, 2779, 3276
Sau3AI	GATC	7 cut(s)	28, 162, 701, 1452, 2099, 2965, 3076
Sau96I	GGNCC	4 cut(s)	56, 1364, 1922, 3380
ScaI	AGTACT	2 cut(s)	113, 365
SchI	GAGTC	5 cut(s)	27, 1628, 1934, 2123, 2586
ScrFI	CCNGG	4 cut(s)	574, 1492, 1685, 2212
SduI	GDGCHC	5 cut(s)	382, 1006, 1360, 1969, 3283
SfcI	CTRYAG	5 cut(s)	1164, 1279, 1743, 1926, 2820
SinI	GGWCC	3 cut(s)	1364, 1922, 3380
SmiMI	CAYNNNNRTG	4 cut(s)	246, 2604, 2779, 3276
SmlI	CTYRAG	6 cut(s)	66, 902, 1273, 1514, 1624, 1850
SmoI	CTYRAG	6 cut(s)	66, 902, 1273, 1514, 1624, 1850
SpeI	ACTAGT	1 cut(s)	308
SphI	GCATGC	3 cut(s)	251, 2299, 2303
SspI	AATATT	3 cut(s)	1485, 2044, 2157
SspMI	CTAG	8 cut(s)	309, 881, 983, 1952, 2349, 2574, 3066, 3276
StyD4I	CCNGG	4 cut(s)	572, 1490, 1683, 2210
StyI	CCWWGG	6 cut(s)	737, 1333, 1360, 2945, 3376, 3507
TaaI	ACNGT	8 cut(s)	1585, 1722, 1783, 2222, 2364, 2532, 2734, 2778
TaiI	ACGT	3 cut(s)	919, 1762, 2880
TaqI	TCGA	3 cut(s)	31, 2402, 2497
TaqII	GACCGA	1 cut(s)	107
TatI	WGTACW	6 cut(s)	111, 363, 535, 1027, 1388, 3521
TauI	GCSGC	5 cut(s)	1307, 1958, 2243, 2258, 2854
TscAI	CASTG	9 cut(s)	380, 643, 1725, 1816, 2367, 2430, 2781, 3100, 3363
TseFI	GTSAC	2 cut(s)	2587, 2595
Tsp45I	GTSAC	2 cut(s)	2587, 2595
TspGWI	ACGGA	3 cut(s)	155, 669, 1102
TspRI	CASTG	9 cut(s)	380, 643, 1725, 1816, 2367, 2430, 2781, 3100, 3363
Tth111I	GACNNNGTC	1 cut(s)	2593
Vha464I	CTTAAG	1 cut(s)	1514
VpaK11BI	GGWCC	3 cut(s)	1364, 1922, 3380
VspI	ATTAAT	1 cut(s)	2520
XagI	CCTNNNNNAGG	2 cut(s)	301, 1514
XapI	RAATTY	3 cut(s)	2340, 3030, 3488
XbaI	TCTAGA	2 cut(s)	982, 2348
XceI	RCATGY	5 cut(s)	251, 390, 1560, 2299, 2303
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1488
XmnI	GAANNNNTTC	4 cut(s)	138, 1530, 1546, 1593
XspI	CTAG	8 cut(s)	309, 881, 983, 1952, 2349, 2574, 3066, 3276
ZrmI	AGTACT	2 cut(s)	113, 365
Zsp2I	ATGCAT	6 cut(s)	278, 1069, 1101, 2301, 2519, 2869

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.