Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003857

Physical Location & Seq

Genomic Coordinates Reverse (-)

10748012 .. 10749495

Gene Structure 1484 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0080300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGCTGCCACAAAGAACCCCAATAATTCAGATAAAAAGCCAACATGGCAAAACCAGAAAAAGGAAGATCATGATGACCAAAAGGCCATGGCTGTGGACACAGTATTAAGCCGGCCTCAGTTACCTGACCACATTATCCACCAAATCATCCAACTCCTTCCTACCAAATCTGCTGTCCGCATGAGCTCTCTTTCCAAGCAATTTGAAGCTGCATGGTACACCCAACCTGTACTAGACTTCGATGAGGGCAAGCCACGCGATGATACAACTGACAGCAACCTTCAGCACATAAAGTTCATCAACATCTTGGATAGGTACTTGGACTACTTCCGTAATGATGAGAAAATCAAGCAGCAACTCTTAGATAAATTCAGGCTTCGCATCACTACTAACTTCTCAGTTAGTGAGTCTACTATGGTAGATGAGTTATTGAGTCTTGCAGTTCGAAGAAGCGTCAAAGAGTTGGACATTAGCATTGGAGGTAAACATGCAGCCTTATACTGTTTAACCCCGAAAAAGCCCCTAAATTTGGCGAAGTCTATAACTACCTTGAGTTTGGAGCATGTGACAATTAATGAAGATGAATCTAATCCTCATCTAAGCTTCCCGTCCTTGAAAACAATGTCGTTAAAAACTCTGCGATTCAGTCACTCCTTGATATCTAGGTGCCCTTCCCTCGAGACTTTGTCAGTATCAACCAGTTCTATGTGTGATGGCTCGTCAACATTCGTAGTTTCAAATTCCAATCTCAAATCCTTGGACATCACAAACTGCGATTTTTTTCAATTAGAAGTGAGAACTACGAATCTAGAATCTTTTACCTTTGTTTCGGAGGATTACATTAGGCTCATCAGTTTGTCCAAGTGCAGAAACTTGAAATCTTTAAACATCCTCGCACAAAAACTGCACTACCTTTATATATCTGGATGCGGACATTCTGTGAAGGCCACAATCGATAGTTCCAGTCTAGAGTATGTTCAGTTTACTGGTTTTTTGAAGTACAAGCTTTCCATAAAAGCTCTAAATTTGTCAAGGGCAAGAATTACTCTTTGTCACGAAGAGCAGAGCTTCAACGAGCCATGGGAACATTTTTCTTCACTGAGAGATTTTCTTGAAAGTTTTGCTTCCTGCTACCAAGAAATAATCCTACGTGTTGATCATGCTGAGATGGCGCAGGCTCTCATCTTTCCAGAAAATTTCAGGAAGACCGTCTCTCCACCATTGCCTATTCTTAAGCATTTTCGGGTTCGCATCACTTCTCCGATGTTGGCGCGAAATTCTGACTTGATGGACTCATTGACTTGGATAGCACCTTCTGCAGAGATTCAAAGAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006355 GO:0006950 GO:0006979 GO:0007275 GO:0007623 GO:0008150 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009636 GO:0009637 GO:0009639 GO:0009791 GO:0009889 GO:0009908 GO:0010035 GO:0010218 GO:0010378 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0042542 GO:0042752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046677 GO:0048367 GO:0048511 GO:0048518 GO:0048578 GO:0048580 GO:0048582 GO:0048583 GO:0048584 GO:0048586 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051239 GO:0051240 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0080090 GO:0080167 GO:0090567 GO:1901700 GO:1903506 GO:2000026 GO:2000028 GO:2000112 GO:2000241 GO:2000243 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

No domains found.

Protein Analysis

445

Amino Acids

50.85

Weight (kDa)

8.04

Isoelectric Point (pI)

41.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	40 - 75	5.8e-06	F-box domain
LRR_At5g56370	PF24758	140 - 309	2.4e-10	FBD-associated F-box protein At5g56370, LRR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003857)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22770
fragaria_vesca	FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030 FvH4_2g13030
malus_domestica	MD05G1033400.v1.1 MD10G1034200.v1.1
prunus_persica	Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1 Prupe.8G040600_v2.0.a1
pyrus_communis	pycom05g02420 pycom10g02270
rosa_chinensis	RchiOBHm_Chr6g0274251
rosa_laevigata	RLG00000013569
rosa_multiflora	Rmu_sc0005132.1_g000012 Rmu_sc0007258.1_g000001 Rmu_sc0041613.1_g000001 Rmu_sc0041918.1_g000001
rosa_roxburghii	Rroxscaffold_7G00194400
rosa_rugosa	Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080200 Rorug06G0080300 Rorug06G0080400
rosa_samantha	Rh6AG195200 Rh6BG199600 Rh6CG199700 Rh6DG191100
rosa_wichuraiana	Rw6G017080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	666
AccI	GTMKAC	1 cut(s)	410
AccII	CGCG	2 cut(s)	258, 1273
AciI	CCGC	2 cut(s)	178, 930
AcsI	RAATTY	6 cut(s)	368, 526, 739, 1024, 1195, 1276
AcuI	CTGAAG	1 cut(s)	266
AfaI	GTAC	4 cut(s)	218, 231, 317, 1001
AfiI	CCNNNNNNNGG	2 cut(s)	61, 529
AflII	CTTAAG	1 cut(s)	1232
AflIII	ACRYGT	1 cut(s)	1150
AgsI	TTSAA	9 cut(s)	206, 616, 738, 785, 877, 997, 1072, 1115, 1328
AluBI	AGCT	6 cut(s)	186, 209, 603, 1006, 1019, 1068
AluI	AGCT	6 cut(s)	186, 209, 603, 1006, 1019, 1068
Alw21I	GWGCWC	1 cut(s)	188
Alw26I	GTCTC	2 cut(s)	674, 1216
Ama87I	CYCGRG	1 cut(s)	677
AoxI	GGCC	3 cut(s)	84, 113, 945
ApeKI	GCWGC	4 cut(s)	5, 209, 352, 491
ApoI	RAATTY	6 cut(s)	368, 526, 739, 1024, 1195, 1276
ArsI	GACNNNNNNTTYG	2 cut(s)	159, 191
AseI	ATTAAT	1 cut(s)	573
AspLEI	GCGC	2 cut(s)	1174, 1273
AsuII	TTCGAA	1 cut(s)	445
AvaI	CYCGRG	1 cut(s)	677
BaeGI	GKGCMC	1 cut(s)	671
BanI	GGYRCC	1 cut(s)	666
BanII	GRGCYC	1 cut(s)	188
BbsI	GAAGAC	1 cut(s)	1211
Bbv12I	GWGCWC	1 cut(s)	188
BbvI	GCAGC	3 cut(s)	196, 364, 503
BccI	CCATC	3 cut(s)	707, 1162, 1282
BclI	TGATCA	1 cut(s)	1156
BcoDI	GTCTC	2 cut(s)	674, 1216
BfaI	CTAG	4 cut(s)	233, 663, 809, 968
BfmI	CTRYAG	1 cut(s)	1317
BfrI	CTTAAG	1 cut(s)	1232
BglI	GCCNNNNNGGC	1 cut(s)	46
BisI	GCNGC	4 cut(s)	6, 210, 353, 492
BlsI	GCNGC	4 cut(s)	7, 211, 354, 493
BmeT110I	CYCGRG	1 cut(s)	677
BmiI	GGNNCC	1 cut(s)	668
BmsI	GCATC	3 cut(s)	390, 917, 1260
BpiI	GAAGAC	1 cut(s)	1211
Bpu14I	TTCGAA	1 cut(s)	445
BpuEI	CTTGAG	1 cut(s)	571
Bsa29I	ATCGAT	1 cut(s)	954
BsaAI	YACGTR	1 cut(s)	1151
BsaJI	CCNNGG	3 cut(s)	87, 756, 1079
BsaXI	ACNNNNNCTCC	2 cut(s)	1198, 1228
Bsc4I	CCNNNNNNNGG	2 cut(s)	61, 529
Bse118I	RCCGGY	1 cut(s)	111
Bse1I	ACTGG	3 cut(s)	699, 963, 991
Bse3DI	GCAATG	1 cut(s)	1220
BseCI	ATCGAT	1 cut(s)	954
BseDI	CCNNGG	3 cut(s)	87, 756, 1079
BseGI	GGATG	3 cut(s)	147, 888, 932
BseLI	CCNNNNNNNGG	2 cut(s)	61, 529
BseMI	GCAATG	1 cut(s)	1220
BseMII	CTCAG	4 cut(s)	131, 411, 1091, 1155
BseNI	ACTGG	3 cut(s)	699, 963, 991
BseSI	GKGCMC	1 cut(s)	671
BseXI	GCAGC	3 cut(s)	196, 364, 503
BsgI	GTGCAG	2 cut(s)	886, 890
Bsh1236I	CGCG	2 cut(s)	258, 1273
BshFI	GGCC	3 cut(s)	86, 115, 947
BshNI	GGYRCC	1 cut(s)	666
BshVI	ATCGAT	1 cut(s)	954
BsiHKAI	GWGCWC	1 cut(s)	188
BsiHKCI	CYCGRG	1 cut(s)	677
BsiSI	CCGG	1 cut(s)	112
BslI	CCNNNNNNNGG	2 cut(s)	61, 529
BsmAI	GTCTC	2 cut(s)	674, 1216
BsmBI	CGTCTC	1 cut(s)	1216
BsnI	GGCC	3 cut(s)	86, 115, 947
BsoBI	CYCGRG	1 cut(s)	677
Bsp119I	TTCGAA	1 cut(s)	445
Bsp1286I	GDGCHC	2 cut(s)	188, 671
Bsp143I	GATC	2 cut(s)	67, 1156
Bsp19I	CCATGG	2 cut(s)	87, 1079
BspACI	CCGC	2 cut(s)	178, 930
BspANI	GGCC	3 cut(s)	86, 115, 947
BspCNI	CTCAG	4 cut(s)	130, 410, 1092, 1156
BspDI	ATCGAT	1 cut(s)	954
BspFNI	CGCG	2 cut(s)	258, 1273
BspHI	TCATGA	1 cut(s)	70
BspLI	GGNNCC	1 cut(s)	668
BspMAI	CTGCAG	1 cut(s)	1321
BspQI	GCTCTTC	1 cut(s)	1053
BspT104I	TTCGAA	1 cut(s)	445
BspT107I	GGYRCC	1 cut(s)	666
BspTI	CTTAAG	1 cut(s)	1232
BsrDI	GCAATG	1 cut(s)	1220
BsrFI	RCCGGY	1 cut(s)	111
BsrI	ACTGG	3 cut(s)	699, 963, 991
BssAI	RCCGGY	1 cut(s)	111
BssECI	CCNNGG	3 cut(s)	87, 756, 1079
BssMI	GATC	2 cut(s)	67, 1156
BssT1I	CCWWGG	3 cut(s)	87, 756, 1079
Bst4CI	ACNGT	3 cut(s)	103, 503, 1210
Bst6I	CTCTTC	1 cut(s)	1053
BstAFI	CTTAAG	1 cut(s)	1232
BstAPI	GCANNNNNTGC	1 cut(s)	1316
BstBAI	YACGTR	1 cut(s)	1151
BstBI	TTCGAA	1 cut(s)	445
BstC8I	GCNNGC	3 cut(s)	113, 251, 1176
BstDEI	CTNAG	6 cut(s)	117, 361, 397, 599, 1100, 1164
BstDSI	CCRYGG	2 cut(s)	87, 1079
BstF5I	GGATG	3 cut(s)	147, 888, 932
BstFNI	CGCG	2 cut(s)	258, 1273
BstHHI	GCGC	2 cut(s)	1174, 1273
BstKTI	GATC	2 cut(s)	70, 1159
BstMAI	GTCTC	2 cut(s)	674, 1216
BstMBI	GATC	2 cut(s)	67, 1156
BstMWI	GCNNNNNNNGC	4 cut(s)	46, 255, 1169, 1316
BstNSI	RCATGY	2 cut(s)	491, 566
BstSFI	CTRYAG	1 cut(s)	1317
BstSLI	GKGCMC	1 cut(s)	671
BstUI	CGCG	2 cut(s)	258, 1273
BstV1I	GCAGC	3 cut(s)	196, 364, 503
BstV2I	GAAGAC	1 cut(s)	1211
BstXI	CCANNNNNNTGG	1 cut(s)	94
Bsu15I	ATCGAT	1 cut(s)	954
BsuRI	GGCC	3 cut(s)	86, 115, 947
BsuTUI	ATCGAT	1 cut(s)	954
BtgI	CCRYGG	2 cut(s)	87, 1079
BtgZI	GCGATG	1 cut(s)	273
BtsCI	GGATG	3 cut(s)	147, 888, 932
BtsIMutI	CAGTG	1 cut(s)	1097
Cac8I	GCNNGC	3 cut(s)	113, 251, 1176
CciI	TCATGA	1 cut(s)	70
CfoI	GCGC	2 cut(s)	1174, 1273
Cfr10I	RCCGGY	1 cut(s)	111
ClaI	ATCGAT	1 cut(s)	954
CseI	GACGC	1 cut(s)	442
Csp6I	GTAC	4 cut(s)	217, 230, 316, 1000
CviAII	CATG	9 cut(s)	45, 71, 88, 181, 213, 488, 563, 1080, 1160
CviQI	GTAC	4 cut(s)	217, 230, 316, 1000
DdeI	CTNAG	6 cut(s)	117, 361, 397, 599, 1100, 1164
DpnI	GATC	2 cut(s)	69, 1158
DpnII	GATC	2 cut(s)	67, 1156
DraI	TTTAAA	1 cut(s)	885
Eam1104I	CTCTTC	1 cut(s)	1053
EarI	CTCTTC	1 cut(s)	1053
Ecl136II	GAGCTC	1 cut(s)	186
Eco130I	CCWWGG	3 cut(s)	87, 756, 1079
Eco24I	GRGCYC	1 cut(s)	188
Eco32I	GATATC	1 cut(s)	660
Eco53kI	GAGCTC	1 cut(s)	186
Eco57I	CTGAAG	1 cut(s)	266
Eco88I	CYCGRG	1 cut(s)	677
EcoICRI	GAGCTC	1 cut(s)	186
EcoRV	GATATC	1 cut(s)	660
EcoT14I	CCWWGG	3 cut(s)	87, 756, 1079
EcoT38I	GRGCYC	1 cut(s)	188
ErhI	CCWWGG	3 cut(s)	87, 756, 1079
Esp3I	CGTCTC	1 cut(s)	1216
FaeI	CATG	9 cut(s)	48, 74, 91, 184, 216, 491, 566, 1083, 1163
FalI	AAGNNNNNCTT	2 cut(s)	1108, 1140
FatI	CATG	9 cut(s)	44, 70, 87, 180, 212, 487, 562, 1079, 1159
FbaI	TGATCA	1 cut(s)	1156
FblI	GTMKAC	1 cut(s)	410
Fnu4HI	GCNGC	4 cut(s)	6, 210, 353, 492
FokI	GGATG	3 cut(s)	134, 875, 939
FriOI	GRGCYC	1 cut(s)	188
Fsp4HI	GCNGC	4 cut(s)	6, 210, 353, 492
FspBI	CTAG	4 cut(s)	233, 663, 809, 968
GlaI	GCGC	2 cut(s)	1173, 1272
GluI	GCNGC	4 cut(s)	6, 210, 353, 492
HaeIII	GGCC	3 cut(s)	86, 115, 947
HapII	CCGG	1 cut(s)	112
HgaI	GACGC	1 cut(s)	442
HhaI	GCGC	2 cut(s)	1174, 1273
Hin1II	CATG	9 cut(s)	48, 74, 91, 184, 216, 491, 566, 1083, 1163
Hin6I	GCGC	2 cut(s)	1172, 1271
HinP1I	GCGC	2 cut(s)	1172, 1271
HincII	GTYRAC	1 cut(s)	723
HindII	GTYRAC	1 cut(s)	723
HindIII	AAGCTT	2 cut(s)	601, 1004
HinfI	GANTC	8 cut(s)	407, 433, 584, 642, 805, 812, 1292, 1324
HpaII	CCGG	1 cut(s)	112
Hpy166II	GTNNAC	6 cut(s)	97, 219, 411, 485, 723, 984
Hpy188I	TCNGA	4 cut(s)	31, 832, 1263, 1282
Hpy188III	TCNNGA	9 cut(s)	71, 679, 809, 924, 968, 1055, 1112, 1190, 1201
Hpy8I	GTNNAC	6 cut(s)	97, 219, 411, 485, 723, 984
HpyAV	CCTTC	5 cut(s)	167, 290, 681, 937, 1323
HpyCH4III	ACNGT	3 cut(s)	103, 503, 1210
HpyCH4IV	ACGT	1 cut(s)	1150
HpyCH4V	TGCA	6 cut(s)	212, 440, 491, 867, 907, 1319
HpyF10VI	GCNNNNNNNGC	4 cut(s)	46, 255, 1169, 1316
HpyF3I	CTNAG	6 cut(s)	117, 361, 397, 599, 1100, 1164
HpySE526I	ACGT	1 cut(s)	1150
Hsp92II	CATG	9 cut(s)	48, 74, 91, 184, 216, 491, 566, 1083, 1163
HspAI	GCGC	2 cut(s)	1172, 1271
KroI	GCCGGC	1 cut(s)	111
KroNI	GCCGGC	1 cut(s)	113
Ksp22I	TGATCA	1 cut(s)	1156
Kzo9I	GATC	2 cut(s)	67, 1156
LguI	GCTCTTC	1 cut(s)	1053
LmnI	GCTCC	1 cut(s)	559
Lsp1109I	GCAGC	3 cut(s)	196, 364, 503
LweI	GCATC	3 cut(s)	390, 917, 1260
MaeI	CTAG	4 cut(s)	233, 663, 809, 968
MaeII	ACGT	1 cut(s)	1150
MaeIII	GTNAC	4 cut(s)	120, 565, 647, 1052
MalI	GATC	2 cut(s)	69, 1158
MboI	GATC	2 cut(s)	67, 1156
MboII	GAAGA	6 cut(s)	77, 459, 590, 1070, 1086, 1216
MhlI	GDGCHC	2 cut(s)	188, 671
MlyI	GAGTC	3 cut(s)	416, 442, 1286
MmeI	TCCRAC	2 cut(s)	175, 444
MnlI	CCTC	7 cut(s)	126, 238, 473, 603, 686, 826, 902
MroNI	GCCGGC	1 cut(s)	111
MseI	TTAA	6 cut(s)	107, 506, 573, 629, 884, 1233
MslI	CAYNNNNRTG	1 cut(s)	92
MspCI	CTTAAG	1 cut(s)	1232
MspI	CCGG	1 cut(s)	112
MvnI	CGCG	2 cut(s)	258, 1273
MwoI	GCNNNNNNNGC	4 cut(s)	46, 255, 1169, 1316
NaeI	GCCGGC	1 cut(s)	113
NcoI	CCATGG	2 cut(s)	87, 1079
NdeII	GATC	2 cut(s)	67, 1156
NgoMIV	GCCGGC	1 cut(s)	111
NlaIII	CATG	9 cut(s)	48, 74, 91, 184, 216, 491, 566, 1083, 1163
NlaIV	GGNNCC	1 cut(s)	668
NmuCI	GTSAC	3 cut(s)	565, 647, 1052
NspI	RCATGY	2 cut(s)	491, 566
NspV	TTCGAA	1 cut(s)	445
PaeR7I	CTCGAG	1 cut(s)	677
PagI	TCATGA	1 cut(s)	70
PciSI	GCTCTTC	1 cut(s)	1053
PdiI	GCCGGC	1 cut(s)	113
PfeI	GAWTC	5 cut(s)	584, 642, 805, 812, 1324
PflFI	GACNNNGTC	1 cut(s)	685
PkrI	GCNGC	4 cut(s)	7, 211, 354, 493
PleI	GAGTC	3 cut(s)	415, 441, 1286
PpsI	GAGTC	3 cut(s)	415, 441, 1286
Ppu21I	YACGTR	1 cut(s)	1151
PshBI	ATTAAT	1 cut(s)	573
Psp124BI	GAGCTC	1 cut(s)	188
PspN4I	GGNNCC	1 cut(s)	668
PstI	CTGCAG	1 cut(s)	1321
PsyI	GACNNNGTC	1 cut(s)	685
RsaI	GTAC	4 cut(s)	218, 231, 317, 1001
RsaNI	GTAC	4 cut(s)	217, 230, 316, 1000
RseI	CAYNNNNRTG	1 cut(s)	92
SacI	GAGCTC	1 cut(s)	188
SapI	GCTCTTC	1 cut(s)	1053
SaqAI	TTAA	6 cut(s)	107, 506, 573, 629, 884, 1233
SatI	GCNGC	4 cut(s)	6, 210, 353, 492
Sau3AI	GATC	2 cut(s)	67, 1156
SchI	GAGTC	3 cut(s)	416, 442, 1286
SduI	GDGCHC	2 cut(s)	188, 671
SfaNI	GCATC	3 cut(s)	390, 917, 1260
SfcI	CTRYAG	1 cut(s)	1317
Sfr274I	CTCGAG	1 cut(s)	677
SfuI	TTCGAA	1 cut(s)	445
SlaI	CTCGAG	1 cut(s)	677
SmiMI	CAYNNNNRTG	1 cut(s)	92
SmlI	CTYRAG	3 cut(s)	550, 677, 1232
SmoI	CTYRAG	3 cut(s)	550, 677, 1232
SsiI	CCGC	2 cut(s)	178, 930
SspMI	CTAG	4 cut(s)	233, 663, 809, 968
SstI	GAGCTC	1 cut(s)	188
StyI	CCWWGG	3 cut(s)	87, 756, 1079
TaaI	ACNGT	3 cut(s)	103, 503, 1210
TaiI	ACGT	1 cut(s)	1153
TaqI	TCGA	4 cut(s)	240, 445, 678, 954
TatI	WGTACW	2 cut(s)	229, 999
TfiI	GAWTC	5 cut(s)	584, 642, 805, 812, 1324
Tru1I	TTAA	6 cut(s)	107, 506, 573, 629, 884, 1233
Tru9I	TTAA	6 cut(s)	107, 506, 573, 629, 884, 1233
TscAI	CASTG	1 cut(s)	1104
TseFI	GTSAC	3 cut(s)	565, 647, 1052
TseI	GCWGC	4 cut(s)	5, 209, 352, 491
Tsp45I	GTSAC	3 cut(s)	565, 647, 1052
TspDTI	ATGAA	3 cut(s)	286, 591, 597
TspGWI	ACGGA	1 cut(s)	320
TspRI	CASTG	1 cut(s)	1104
Tth111I	GACNNNGTC	1 cut(s)	685
Vha464I	CTTAAG	1 cut(s)	1232
VspI	ATTAAT	1 cut(s)	573
XapI	RAATTY	6 cut(s)	368, 526, 739, 1024, 1195, 1276
XbaI	TCTAGA	2 cut(s)	808, 967
XceI	RCATGY	2 cut(s)	491, 566
XhoI	CTCGAG	1 cut(s)	677
XmiI	GTMKAC	1 cut(s)	410
XspI	CTAG	4 cut(s)	233, 663, 809, 968

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.