Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002203

Physical Location & Seq

Genomic Coordinates Forward (+)

8951162 .. 8955160

Gene Structure 3999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G25490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGCTATGGTAGATGAACCGTTGTATCCCATTGCTGTGCTTATAGATGAGCTTAAGAATGATGATATTCAGCTTCGTTTGAACTCGATCCGTCGCTTATCTACTATAGCTCGTGCTCTTGGAGAGGAGCGTACAAGGAAGGAGTTAATCCCTTTTTTGAGTGAGAATAGTGACGATGACGATGAGGTGCTTCTTGCAATGGCTGAGGAGTTAGGAGTTTTTATTCCGTTTGTTGGAGGAATTGAGTTTGCGCATGTTCTTCTTCCTCCTTTGGAATCTCTATGTACTGTTGAAGAGACTTGTGTGAGAGAAAAAGCTGTGGAATCGCTTTGTAAGATTGGATCTCAGATGAAAGAGAATGATCTTGTTGAATCTTTTGTTCCTCTTGTGAAGAGGTTAGCGGGTGGTGAATGGTTTGCAGCAAGAGTTTCTGCATGTGGTATATTTCATGTTGCATACCAAGGTTGCACTGATGTGTTGAAGACTGAGTTACGGGCTACTTATAGCCAGTTGTGCAAAGATGATATGCCAATGGTGCGAAGAGCTGCTGCATCTAACCTGGGGAAATTTGCTACAACTGTCGAGTCTACCTTTTTGATTGCTGAGATCATGACTATGTTCGATGATCTTACTAAAGATGACCAAGATTCTGTGAGACTATTGGCTGTTGAAGGGTGTGCAGCTCTTGGAAAGTTGTTGGAACCTCAGGATTGTGTTGCACGCATTTTACCTGTTATTGTTAATTTCTCTCAGGATAAATCTTGGAGGGTGCGCTACATGGTTGCTAATCAGCTATATGAACTTTGTGAGGCAGTGGGTCCTGATTGCACGAGGACGGATTTGGTTCCAGCATATGTGAGATTGCTAAGGGACAATGAGGCTGAAGTGCGAATAGCAGCAGCGGGAAAAGTGACCAAGTTCTGTCGGCTTTTGAATCCAGAGCTTGCGATTCAGCACATCCTTCCTTGTGTGAAGGAATTATCATCGGATTCTTCTCAACATGTCCGCTCTGCTCTAGCTTCAGTAATAATGGGGATGGCTCCTATCCTTGGGAAGGACTCAACCATTGAGCATCTGTTACCAATTTTTCTTTCCCTTTTGAAAGATGAATTTCCTGATGTGCGCCTTAACATCATAAGCAAGTTAGATCAAGTCAACCAGGTTATTGGAATTGATCTACTATCTCAATCCTTGTTACCGGCCATTGTAGAACTTGCTGAGGATCGGCACTGGAGAGTCCGACTTGCAATAATAGAGTATGTTCCACTGTTGGCCAGCCAGTTAGGTATAGGATTTTTCGATGACAAGCTCGGAGCCCTTTGCATGCAATGGCTGCAAGACAAGGTCTACTCTATCCGCGAAGCTGCAGCAAACAACCTAAAGCGCCTCGCAGAGGAGTTTGGTCCTGAATGGGCAATGCAGCACTTAGTTCCCCAGGTATTGGACATGGTCAACAATCCGCACTACCTACACAGGATGATGGTTCTACGCGCAATATCTCTCATGGCGCCTGTAATGGGATCAGAAATCACATGCTCTAAGTTTCTTCCTGTGGTTGTTGAAGCATCAAAAGACAGAGTTCCAAACATCAAGTTCAACGTTGCCAAACTTCTGCAATCCCTCATCCCCATAGTCGACCAATCAGTGGTGGACAAAACAATCCGTCAGTGTTTGGTGGACCTGAGCGAAGACCCTGATGTTGATGTTCGTTATTTTGCAAATCAAGCACTTAATTCCATCGATGGTTCCACAGCAGCACAATCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000159 GO:0001101 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006810 GO:0007154 GO:0007165 GO:0008150 GO:0008287 GO:0009719 GO:0009723 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009787 GO:0009789 GO:0009914 GO:0009926 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010119 GO:0010646 GO:0010647 GO:0010817 GO:0016020 GO:0019220 GO:0019222 GO:0023051 GO:0023052 GO:0023056 GO:0030312 GO:0031323 GO:0031399 GO:0032268 GO:0032870 GO:0032991 GO:0033993 GO:0035303 GO:0035304 GO:0042221 GO:0042325 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051174 GO:0051179 GO:0051234 GO:0051246 GO:0051716 GO:0060255 GO:0060918 GO:0065007 GO:0065008 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071944 GO:0080090 GO:0097305 GO:0097306 GO:1901419 GO:1901421 GO:1901700 GO:1901701 GO:1902494 GO:1903293 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04113 ko04114 ko04151 ko04152 ko04261 ko04350 ko04390 ko04391 ko04530 ko04728 ko04730 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04113 map04114 map04151 map04152 map04261 map04350 map04390 map04391 map04530 map04728 map04730 map05142 map05160 map05165

Pfam Domains

Protein Families

HEAT HEAT_2

Protein Analysis

588

Amino Acids

65.49

Weight (kDa)

4.94

Isoelectric Point (pI)

42.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS15-like_hel	PF22956	201 - 309	3e-07	VPS15-like, helical domain
PPP2R1A-like_HEAT	PF22646	274 - 351	1.8e-31	PPP2R1A-like HEAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13320 AT1G13320 AT1G13320 AT1G25490 AT3G25800 AT3G25800 AT3G25800
fragaria_vesca	FvH4_4g27700 FvH4_4g27700 FvH4_5g12331 FvH4_5g12331
malus_domestica	MD06G1214700.v1.1 MD13G1044500.v1.1 MD14G1225600.v1.1 MD16G1045400.v1.1
prunus_persica	Prupe.1G307900_v2.0.a1 Prupe.1G307900_v2.0.a1 Prupe.5G220100_v2.0.a1
pyrus_communis	pycom06g19130 pycom13g03910 pycom14g18680 pycom16g03990
rosa_chinensis	RchiOBHm_Chr4g0435561 RchiOBHm_Chr7g0185211
rosa_laevigata	RLG00000006582
rosa_multiflora	Rmu_sc0001940.1_g000038
rosa_roxburghii	Rroxscaffold_3G00269150 Rroxscaffold_5G00376790
rosa_rugosa	Rorug04G0286500 Rorug04G0286500 Rorug04G0286600 Rorug06G0466800 Rorug06G0466900
rosa_samantha	Rh4AG342000 Rh4BG350200 Rh4CG364900 Rh4DG344500 Rh7AG076000 Rh7BG071300 Rh7CG072600 Rh7DG072000
rosa_wichuraiana	Rw4G029830 Rw7G005990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	252
AccB1I	GGYRCC	1 cut(s)	1507
AccB7I	CCANNNNNTGG	2 cut(s)	1441, 1645
AccBSI	CCGCTC	1 cut(s)	1008
AccI	GTMKAC	3 cut(s)	587, 1347, 1635
AccII	CGCG	2 cut(s)	1359, 1491
AciI	CCGC	5 cut(s)	401, 902, 1006, 1357, 1460
AclI	AACGTT	1 cut(s)	1599
AclWI	GGATC	4 cut(s)	82, 349, 1230, 1528
AcoI	YGGCCR	2 cut(s)	1200, 1272
AcsI	RAATTY	2 cut(s)	566, 1109
AcuI	CTGAAG	2 cut(s)	903, 1005
AcyI	GRCGYC	1 cut(s)	1508
AfaI	GTAC	2 cut(s)	133, 286
AfiI	CCNNNNNNNGG	7 cut(s)	233, 1049, 1054, 1393, 1441, 1517, 1645
AflII	CTTAAG	1 cut(s)	53
AflIII	ACRYGT	1 cut(s)	1000
AgsI	TTSAA	9 cut(s)	82, 293, 371, 481, 671, 934, 1102, 1562, 1597
AjnI	CCWGG	3 cut(s)	558, 1158, 1434
AjuI	GAANNNNNNNTTGG	2 cut(s)	1075, 1107
AleI	CACNNNNGTG	1 cut(s)	473
Alw21I	GWGCWC	1 cut(s)	118
Alw26I	GTCTC	2 cut(s)	290, 649
AlwI	GGATC	4 cut(s)	82, 349, 1230, 1528
AoxI	GGCC	2 cut(s)	1200, 1272
ApoI	RAATTY	2 cut(s)	566, 1109
AspLEI	GCGC	6 cut(s)	253, 774, 1125, 1386, 1493, 1510
AspS9I	GGNCC	3 cut(s)	818, 1403, 1678
AsuHPI	GGTGA	1 cut(s)	419
AvaII	GGWCC	3 cut(s)	818, 1403, 1678
AxyI	CCTNAGG	1 cut(s)	705
BaeI	ACNNNNGTAYC	2 cut(s)	8, 41
BalI	TGGCCA	1 cut(s)	1274
BanI	GGYRCC	1 cut(s)	1507
BanII	GRGCYC	1 cut(s)	1318
BauI	CACGAG	2 cut(s)	111, 829
BbsI	GAAGAC	2 cut(s)	488, 1695
Bbv12I	GWGCWC	1 cut(s)	118
BbvCI	CCTCAGC	2 cut(s)	204, 1218
BccI	CCATC	4 cut(s)	1030, 1474, 1736, 1745
BciT130I	CCWGG	3 cut(s)	560, 1160, 1436
BciVI	GTATCC	1 cut(s)	36
BcoDI	GTCTC	2 cut(s)	290, 649
BfaI	CTAG	1 cut(s)	1016
BfmI	CTRYAG	2 cut(s)	105, 1365
BfoI	RGCGCY	2 cut(s)	1387, 1511
BfrI	CTTAAG	1 cut(s)	53
BfuI	GTATCC	1 cut(s)	36
Bme1390I	CCNGG	3 cut(s)	560, 1160, 1436
Bme18I	GGWCC	3 cut(s)	818, 1403, 1678
BmgT120I	GGNCC	3 cut(s)	818, 1403, 1678
BmiI	GGNNCC	7 cut(s)	702, 819, 846, 1041, 1315, 1509, 1747
BmrFI	CCNGG	3 cut(s)	560, 1160, 1436
BmsI	GCATC	3 cut(s)	560, 1081, 1574
BpiI	GAAGAC	2 cut(s)	488, 1695
BpmI	CTGGAG	1 cut(s)	1252
Bpu10I	CCTNAGC	4 cut(s)	204, 866, 1218, 1682
Bsa29I	ATCGAT	1 cut(s)	1740
BsaHI	GRCGYC	1 cut(s)	1508
BsaJI	CCNNGG	4 cut(s)	460, 559, 1048, 1434
Bsc4I	CCNNNNNNNGG	7 cut(s)	233, 1049, 1054, 1393, 1441, 1517, 1645
Bse118I	RCCGGY	1 cut(s)	1198
Bse1I	ACTGG	3 cut(s)	508, 1235, 1279
Bse21I	CCTNAGG	1 cut(s)	705
Bse3DI	GCAATG	4 cut(s)	30, 204, 1334, 1422
BseBI	CCWGG	3 cut(s)	560, 1160, 1436
BseCI	ATCGAT	1 cut(s)	1740
BseDI	CCNNGG	4 cut(s)	460, 559, 1048, 1434
BseGI	GGATG	4 cut(s)	957, 1041, 1482, 1623
BseLI	CCNNNNNNNGG	7 cut(s)	233, 1049, 1054, 1393, 1441, 1517, 1645
BseMI	GCAATG	4 cut(s)	30, 204, 1334, 1422
BseMII	CTCAG	8 cut(s)	195, 359, 477, 594, 719, 764, 1209, 1673
BseNI	ACTGG	3 cut(s)	508, 1235, 1279
BseRI	GAGGAG	3 cut(s)	140, 221, 1409
BsgI	GTGCAG	1 cut(s)	699
Bsh1236I	CGCG	2 cut(s)	1359, 1491
BshFI	GGCC	2 cut(s)	1202, 1274
BshNI	GGYRCC	1 cut(s)	1507
BshVI	ATCGAT	1 cut(s)	1740
BsiHKAI	GWGCWC	1 cut(s)	118
BsiSI	CCGG	1 cut(s)	1199
BslFI	GGGAC	1 cut(s)	884
BslI	CCNNNNNNNGG	7 cut(s)	233, 1049, 1054, 1393, 1441, 1517, 1645
BsmAI	GTCTC	2 cut(s)	290, 649
BsmFI	GGGAC	1 cut(s)	884
BsnI	GGCC	2 cut(s)	1202, 1274
Bsp1286I	GDGCHC	2 cut(s)	118, 1318
Bsp143I	GATC	9 cut(s)	87, 341, 361, 606, 625, 1147, 1174, 1222, 1520
BspACI	CCGC	5 cut(s)	401, 902, 1006, 1357, 1460
BspANI	GGCC	2 cut(s)	1202, 1274
BspCNI	CTCAG	8 cut(s)	196, 358, 478, 595, 718, 763, 1210, 1674
BspDI	ATCGAT	1 cut(s)	1740
BspFNI	CGCG	2 cut(s)	1359, 1491
BspHI	TCATGA	1 cut(s)	609
BspLI	GGNNCC	7 cut(s)	702, 819, 846, 1041, 1315, 1509, 1747
BspMAI	CTGCAG	1 cut(s)	1369
BspPI	GGATC	4 cut(s)	82, 349, 1230, 1528
BspQI	GCTCTTC	1 cut(s)	535
BspT107I	GGYRCC	1 cut(s)	1507
BspTI	CTTAAG	1 cut(s)	53
BsrBI	CCGCTC	1 cut(s)	1008
BsrDI	GCAATG	4 cut(s)	30, 204, 1334, 1422
BsrFI	RCCGGY	1 cut(s)	1198
BsrI	ACTGG	3 cut(s)	508, 1235, 1279
BssAI	RCCGGY	1 cut(s)	1198
BssECI	CCNNGG	4 cut(s)	460, 559, 1048, 1434
BssMI	GATC	9 cut(s)	87, 341, 361, 606, 625, 1147, 1174, 1222, 1520
BssNI	GRCGYC	1 cut(s)	1508
BssSI	CACGAG	2 cut(s)	111, 829
BssT1I	CCWWGG	2 cut(s)	460, 1048
Bst2BI	CACGAG	2 cut(s)	111, 829
Bst2UI	CCWGG	3 cut(s)	560, 1160, 1436
Bst4CI	ACNGT	4 cut(s)	21, 289, 580, 1269
Bst6I	CTCTTC	3 cut(s)	288, 386, 535
BstACI	GRCGYC	1 cut(s)	1508
BstAFI	CTTAAG	1 cut(s)	53
BstAPI	GCANNNNNTGC	1 cut(s)	1333
BstC8I	GCNNGC	4 cut(s)	721, 945, 1276, 1325
BstENI	CCTNNNNNAGG	2 cut(s)	1052, 1391
BstF5I	GGATG	4 cut(s)	957, 1041, 1482, 1623
BstFNI	CGCG	2 cut(s)	1359, 1491
BstH2I	RGCGCY	2 cut(s)	1387, 1511
BstHHI	GCGC	6 cut(s)	253, 774, 1125, 1386, 1493, 1510
BstKTI	GATC	9 cut(s)	90, 344, 364, 609, 628, 1150, 1177, 1225, 1523
BstMAI	GTCTC	2 cut(s)	290, 649
BstMBI	GATC	9 cut(s)	87, 341, 361, 606, 625, 1147, 1174, 1222, 1520
BstMWI	GCNNNNNNNGC	4 cut(s)	513, 535, 1333, 1724
BstNI	CCWGG	3 cut(s)	560, 1160, 1436
BstNSI	RCATGY	5 cut(s)	257, 438, 1004, 1327, 1536
BstSCI	CCNGG	3 cut(s)	558, 1158, 1434
BstSFI	CTRYAG	2 cut(s)	105, 1365
BstUI	CGCG	2 cut(s)	1359, 1491
BstV2I	GAAGAC	2 cut(s)	488, 1695
BstX2I	RGATCY	1 cut(s)	341
BstXI	CCANNNNNNTGG	1 cut(s)	1166
BstYI	RGATCY	1 cut(s)	341
Bsu15I	ATCGAT	1 cut(s)	1740
Bsu36I	CCTNAGG	1 cut(s)	705
BsuI	GTATCC	1 cut(s)	36
BsuRI	GGCC	2 cut(s)	1202, 1274
BsuTUI	ATCGAT	1 cut(s)	1740
BtsCI	GGATG	4 cut(s)	957, 1041, 1482, 1623
BtsI	GCAGTG	1 cut(s)	819
BtsIMutI	CAGTG	6 cut(s)	468, 819, 1228, 1265, 1650, 1673
Cac8I	GCNNGC	4 cut(s)	721, 945, 1276, 1325
CciI	TCATGA	1 cut(s)	609
CfoI	GCGC	6 cut(s)	253, 774, 1125, 1386, 1493, 1510
Cfr10I	RCCGGY	1 cut(s)	1198
Cfr13I	GGNCC	3 cut(s)	818, 1403, 1678
ClaI	ATCGAT	1 cut(s)	1740
CsiI	ACCWGGT	1 cut(s)	1158
Csp6I	GTAC	2 cut(s)	132, 285
CviQI	GTAC	2 cut(s)	132, 285
DinI	GGCGCC	1 cut(s)	1509
DpnI	GATC	9 cut(s)	89, 343, 363, 608, 627, 1149, 1176, 1224, 1522
DpnII	GATC	9 cut(s)	87, 341, 361, 606, 625, 1147, 1174, 1222, 1520
EaeI	YGGCCR	2 cut(s)	1200, 1272
Eam1104I	CTCTTC	3 cut(s)	288, 386, 535
EarI	CTCTTC	3 cut(s)	288, 386, 535
Eco130I	CCWWGG	2 cut(s)	460, 1048
Eco24I	GRGCYC	1 cut(s)	1318
Eco47I	GGWCC	3 cut(s)	818, 1403, 1678
Eco57I	CTGAAG	2 cut(s)	903, 1005
Eco81I	CCTNAGG	1 cut(s)	705
EcoNI	CCTNNNNNAGG	2 cut(s)	1052, 1391
EcoO109I	RGGNCCY	1 cut(s)	818
EcoRII	CCWGG	3 cut(s)	558, 1158, 1434
EcoT14I	CCWWGG	2 cut(s)	460, 1048
EcoT38I	GRGCYC	1 cut(s)	1318
EgeI	GGCGCC	1 cut(s)	1509
EheI	GGCGCC	1 cut(s)	1509
ErhI	CCWWGG	2 cut(s)	460, 1048
FaqI	GGGAC	1 cut(s)	884
FauI	CCCGC	2 cut(s)	394, 895
FauNDI	CATATG	1 cut(s)	853
FblI	GTMKAC	3 cut(s)	587, 1347, 1635
FokI	GGATG	4 cut(s)	944, 1048, 1489, 1610
FriOI	GRGCYC	1 cut(s)	1318
FspBI	CTAG	1 cut(s)	1016
FspI	TGCGCA	1 cut(s)	252
GlaI	GCGC	6 cut(s)	252, 773, 1124, 1385, 1492, 1509
GsuI	CTGGAG	1 cut(s)	1252
HaeII	RGCGCY	2 cut(s)	1387, 1511
HaeIII	GGCC	2 cut(s)	1202, 1274
HapII	CCGG	1 cut(s)	1199
HhaI	GCGC	6 cut(s)	253, 774, 1125, 1386, 1493, 1510
Hin1I	GRCGYC	1 cut(s)	1508
Hin6I	GCGC	6 cut(s)	251, 772, 1123, 1384, 1491, 1508
HinP1I	GCGC	6 cut(s)	251, 772, 1123, 1384, 1491, 1508
HincII	GTYRAC	3 cut(s)	1156, 1453, 1636
HindII	GTYRAC	3 cut(s)	1156, 1453, 1636
HpaII	CCGG	1 cut(s)	1199
HphI	GGTGA	1 cut(s)	419
Hpy166II	GTNNAC	7 cut(s)	588, 1156, 1348, 1453, 1636, 1651, 1678
Hpy188I	TCNGA	5 cut(s)	348, 988, 1241, 1313, 1525
Hpy188III	TCNNGA	8 cut(s)	610, 707, 752, 821, 938, 1115, 1406, 1764
Hpy8I	GTNNAC	7 cut(s)	588, 1156, 1348, 1453, 1636, 1651, 1678
Hpy99I	CGWCG	1 cut(s)	96
HpyAV	CCTTC	5 cut(s)	133, 665, 967, 971, 1048
HpyCH4III	ACNGT	4 cut(s)	21, 289, 580, 1269
HpyCH4IV	ACGT	1 cut(s)	1599
HpyF10VI	GCNNNNNNNGC	4 cut(s)	513, 535, 1333, 1724
HpySE526I	ACGT	1 cut(s)	1599
Hsp92I	GRCGYC	1 cut(s)	1508
HspAI	GCGC	6 cut(s)	251, 772, 1123, 1384, 1491, 1508
KasI	GGCGCC	1 cut(s)	1507
Kzo9I	GATC	9 cut(s)	87, 341, 361, 606, 625, 1147, 1174, 1222, 1520
LguI	GCTCTTC	1 cut(s)	535
LmnI	GCTCC	3 cut(s)	127, 1045, 1313
LweI	GCATC	3 cut(s)	560, 1081, 1574
MabI	ACCWGGT	1 cut(s)	1158
MaeI	CTAG	1 cut(s)	1016
MaeII	ACGT	1 cut(s)	1599
MaeIII	GTNAC	5 cut(s)	170, 489, 910, 1077, 1194
MalI	GATC	9 cut(s)	89, 343, 363, 608, 627, 1149, 1176, 1224, 1522
MbiI	CCGCTC	1 cut(s)	1008
MboI	GATC	9 cut(s)	87, 341, 361, 606, 625, 1147, 1174, 1222, 1520
MboII	GAAGA	9 cut(s)	251, 254, 305, 403, 493, 552, 984, 1538, 1700
MflI	RGATCY	1 cut(s)	341
MhlI	GDGCHC	2 cut(s)	118, 1318
MlsI	TGGCCA	1 cut(s)	1274
MluCI	AATT	8 cut(s)	240, 566, 742, 977, 1083, 1109, 1170, 1732
MluNI	TGGCCA	1 cut(s)	1274
Mly113I	GGCGCC	1 cut(s)	1508
MlyI	GAGTC	3 cut(s)	593, 1052, 1245
MmeI	TCCRAC	3 cut(s)	214, 678, 1264
Mox20I	TGGCCA	1 cut(s)	1274
MscI	TGGCCA	1 cut(s)	1274
MseI	TTAA	5 cut(s)	54, 146, 741, 1128, 1731
MslI	CAYNNNNRTG	3 cut(s)	35, 473, 614
Msp20I	TGGCCA	1 cut(s)	1274
MspA1I	CMGCKG	1 cut(s)	902
MspCI	CTTAAG	1 cut(s)	53
MspI	CCGG	1 cut(s)	1199
MspR9I	CCNGG	3 cut(s)	560, 1160, 1436
MvaI	CCWGG	3 cut(s)	560, 1160, 1436
MvnI	CGCG	2 cut(s)	1359, 1491
MwoI	GCNNNNNNNGC	4 cut(s)	513, 535, 1333, 1724
NarI	GGCGCC	1 cut(s)	1508
NdeI	CATATG	1 cut(s)	853
NdeII	GATC	9 cut(s)	87, 341, 361, 606, 625, 1147, 1174, 1222, 1520
NlaIV	GGNNCC	7 cut(s)	702, 819, 846, 1041, 1315, 1509, 1747
NmuCI	GTSAC	2 cut(s)	170, 910
NsbI	TGCGCA	1 cut(s)	252
NspI	RCATGY	5 cut(s)	257, 438, 1004, 1327, 1536
OliI	CACNNNNGTG	1 cut(s)	473
PaeI	GCATGC	1 cut(s)	1327
PagI	TCATGA	1 cut(s)	609
PciI	ACATGT	1 cut(s)	1000
PciSI	GCTCTTC	1 cut(s)	535
PfeI	GAWTC	7 cut(s)	275, 323, 371, 647, 934, 949, 989
PflFI	GACNNNGTC	2 cut(s)	1343, 1448
PflMI	CCANNNNNTGG	2 cut(s)	1441, 1645
PleI	GAGTC	3 cut(s)	592, 1052, 1244
PluTI	GGCGCC	1 cut(s)	1511
PpsI	GAGTC	3 cut(s)	592, 1052, 1244
PpuMI	RGGWCCY	1 cut(s)	818
PscI	ACATGT	1 cut(s)	1000
Psp1406I	AACGTT	1 cut(s)	1599
Psp5II	RGGWCCY	1 cut(s)	818
Psp6I	CCWGG	3 cut(s)	558, 1158, 1434
PspGI	CCWGG	3 cut(s)	558, 1158, 1434
PspN4I	GGNNCC	7 cut(s)	702, 819, 846, 1041, 1315, 1509, 1747
PspPI	GGNCC	3 cut(s)	818, 1403, 1678
PspPPI	RGGWCCY	1 cut(s)	818
PstI	CTGCAG	1 cut(s)	1369
PsuI	RGATCY	1 cut(s)	341
PsyI	GACNNNGTC	2 cut(s)	1343, 1448
RsaI	GTAC	2 cut(s)	133, 286
RsaNI	GTAC	2 cut(s)	132, 285
RseI	CAYNNNNRTG	3 cut(s)	35, 473, 614
SalI	GTCGAC	1 cut(s)	1634
SapI	GCTCTTC	1 cut(s)	535
SaqAI	TTAA	5 cut(s)	54, 146, 741, 1128, 1731
Sau3AI	GATC	9 cut(s)	87, 341, 361, 606, 625, 1147, 1174, 1222, 1520
Sau96I	GGNCC	3 cut(s)	818, 1403, 1678
SchI	GAGTC	3 cut(s)	593, 1052, 1245
ScrFI	CCNGG	3 cut(s)	560, 1160, 1436
SduI	GDGCHC	2 cut(s)	118, 1318
SexAI	ACCWGGT	1 cut(s)	1158
SfaNI	GCATC	3 cut(s)	560, 1081, 1574
SfcI	CTRYAG	2 cut(s)	105, 1365
SfoI	GGCGCC	1 cut(s)	1509
SinI	GGWCC	3 cut(s)	818, 1403, 1678
SmiMI	CAYNNNNRTG	3 cut(s)	35, 473, 614
SmlI	CTYRAG	1 cut(s)	53
SmoI	CTYRAG	1 cut(s)	53
SphI	GCATGC	1 cut(s)	1327
Sse9I	AATT	8 cut(s)	240, 566, 742, 977, 1083, 1109, 1170, 1732
SsiI	CCGC	5 cut(s)	401, 902, 1006, 1357, 1460
SspDI	GGCGCC	1 cut(s)	1507
SspMI	CTAG	1 cut(s)	1016
StyD4I	CCNGG	3 cut(s)	558, 1158, 1434
StyI	CCWWGG	2 cut(s)	460, 1048
TaaI	ACNGT	4 cut(s)	21, 289, 580, 1269
TaiI	ACGT	1 cut(s)	1602
TaqI	TCGA	6 cut(s)	86, 582, 621, 1299, 1635, 1740
TasI	AATT	8 cut(s)	240, 566, 742, 977, 1083, 1109, 1170, 1732
TatI	WGTACW	1 cut(s)	284
TfiI	GAWTC	7 cut(s)	275, 323, 371, 647, 934, 949, 989
Tru1I	TTAA	5 cut(s)	54, 146, 741, 1128, 1731
Tru9I	TTAA	5 cut(s)	54, 146, 741, 1128, 1731
TscAI	CASTG	6 cut(s)	475, 819, 1235, 1272, 1650, 1673
TseFI	GTSAC	2 cut(s)	170, 910
Tsp45I	GTSAC	2 cut(s)	170, 910
TspDTI	ATGAA	5 cut(s)	30, 365, 437, 813, 1122
TspGWI	ACGGA	4 cut(s)	80, 216, 851, 1652
TspRI	CASTG	6 cut(s)	475, 819, 1235, 1272, 1650, 1673
Tth111I	GACNNNGTC	2 cut(s)	1343, 1448
Van91I	CCANNNNNTGG	2 cut(s)	1441, 1645
Vha464I	CTTAAG	1 cut(s)	53
VpaK11BI	GGWCC	3 cut(s)	818, 1403, 1678
XagI	CCTNNNNNAGG	2 cut(s)	1052, 1391
XapI	RAATTY	2 cut(s)	566, 1109
XceI	RCATGY	5 cut(s)	257, 438, 1004, 1327, 1536
XmiI	GTMKAC	3 cut(s)	587, 1347, 1635
XspI	CTAG	1 cut(s)	1016

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.