Rmu_sc0001940.1_g000038

Serine threonine-protein phosphatase 2A 65 kDa regulatory subunit A

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001940.1
Physical Location & Seq
Forward (+)
145989 .. 151175
5187 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001940.1_g000038.1.cds

Sequence Viewer

Length: 1587 bp
atggttgatgaaccgctatatccgatagccgttctcatagacgagctgaaaaatgacgacatccagttacggctgaactcaatccgcaggctatcaacaattgcccgtgctcttggggaagatcgaacgcggaaggagttgatcccatttctgagcgaaaacaatgatgatgatgatgaggtacttcttgcaatggcagaagagttgggggtcttcattccatatgttgggggtgtggaacatgcacatgttttgcttccacccttggaaaccctttgcactgttgaggagacctgcgtgagggacaaggctgtggagtcattatgtaggattgggtctcagatgagggagggtgatttagtcagctggtttattcctcttgtgaagaggttggcggctggtgagtggtttacagcccgagtctctgcatgtgggctttttcatatagcctacccaagcgcatcagagacattaaagacagagctccggtcgatatacagtcagttgtgtcaagatgacatgcctatggttaggaggtctgctgcaacgaatctggggaaatttgcagcaactgtcgaaccagctcatctgaagactgatatcatgtctatatttgaggatcttacacaagatgatcaagattctgttcgactattggctgttgaaggctgtgctgctcttggcaagttattggagccccaagattgtgttcagcatatcctccctgttattgtcaatttctcgcaggacaaatcttggcgtgtgcgatatatggttgcaaatcaactatatgagctttgtgaagctgtggggcctgaccctacaagaacggacttggttccagcatacgtgcgattgcttcgagataatgaggctgaagatgctacaattgagcaacttcttcccatttttctttcacttctgaaggatgaatttcctgatgtgcgcctcaatatcattagcaagcttgatcaagtgaatcaggttattggaatcgatttgctatctcaatccttgttaccagccatagttgagctcgcggaggatagacattggagggttcgacttgcaattatagagtacatacctttgttggcaagtcagctgggtgtagggttctttgatgataagctcggttccctttgcatgcagtggttgcaggataaggtttactcgattcgtgatgctgctgctaataatttgaagcgccttgctgaagaatttggtccagaatgggcaatgcagcacattgttccacaggttctggagatgattgacaatccccactatttatatcgaatgacaattctgcgtgcaatctgcctccttgcccccgttatgggttcagaaatcacatgttcaaaactgctgccagtggttgtcactgcatcaaaggacagagtacccaacattaagttcaatgtggcaaaggtgctgcagtcccttatccccatagttgatcattcggtggtggagaagacaattcgtcccactttggttgagctcagtgaggatccagatgttgatgtccgattttttgctacccaggcacttcaagcaattgatcatgttatgatgtcaagctag
Functional Annotation

Protein Analysis

528

Amino Acids

59.37

Weight (kDa)

4.78

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 302
AccB7I CCANNNNNTGG 1 cut(s) 227
AccII CGCG 2 cut(s) 130, 1040
AciI CCGC 5 cut(s) 14, 85, 130, 395, 1040
AclWI GGATC 4 cut(s) 136, 627, 1508, 1521
AcsI RAATTY 3 cut(s) 560, 932, 1220
AcuI CTGAAG 4 cut(s) 611, 897, 944, 1236
AfaI GTAC 3 cut(s) 183, 1082, 1404
AfiI CCNNNNNNNGG 4 cut(s) 227, 300, 1339, 1340
AflIII ACRYGT 2 cut(s) 247, 1355
AgsI TTSAA 5 cut(s) 665, 1204, 1362, 1420, 1556
AhdI GACNNNNNGTC 1 cut(s) 1485
AjnI CCWGG 1 cut(s) 1545
AjuI GAANNNNNNNTTGG 4 cut(s) 693, 725, 1400, 1432
Alw21I GWGCWC 4 cut(s) 112, 486, 1038, 1506
Alw26I GTCTC 4 cut(s) 284, 342, 427, 461
AlwI GGATC 4 cut(s) 136, 627, 1508, 1521
AlwNI CAGNNNCTG 2 cut(s) 572, 1264
Ama87I CYCGRG 1 cut(s) 417
AoxI GGCC 1 cut(s) 812
ApeKI GCWGC 8 cut(s) 542, 566, 674, 1187, 1190, 1243, 1369, 1435
ApoI RAATTY 3 cut(s) 560, 932, 1220
AspLEI GCGC 3 cut(s) 461, 948, 1209
AspS9I GGNCC 2 cut(s) 812, 1226
AsuHPI GGTGA 2 cut(s) 365, 413
AvaI CYCGRG 1 cut(s) 417
AvaII GGWCC 1 cut(s) 1226
BamHI GGATCC 1 cut(s) 1513
BanII GRGCYC 4 cut(s) 486, 699, 1038, 1506
BbsI GAAGAC 3 cut(s) 205, 599, 1484
Bbv12I GWGCWC 4 cut(s) 112, 486, 1038, 1506
BbvI GCAGC 8 cut(s) 529, 578, 661, 1174, 1177, 1255, 1356, 1422
BceAI ACGGC 2 cut(s) 14, 86
BciT130I CCWGG 1 cut(s) 1547
BclI TGATCA 4 cut(s) 634, 970, 1459, 1564
BcoDI GTCTC 4 cut(s) 284, 342, 427, 461
BfaI CTAG 1 cut(s) 1585
BfmI CTRYAG 1 cut(s) 1436
BfoI RGCGCY 1 cut(s) 1210
BfuAI ACCTGC 1 cut(s) 302
BisI GCNGC 9 cut(s) 396, 543, 567, 675, 1188, 1191, 1244, 1370, 1436
BlsI GCNGC 9 cut(s) 397, 544, 568, 676, 1189, 1192, 1245, 1371, 1437
Bme1390I CCNGG 1 cut(s) 1547
Bme18I GGWCC 1 cut(s) 1226
BmeRI GACNNNNNGTC 1 cut(s) 1485
BmeT110I CYCGRG 1 cut(s) 417
BmgT120I GGNCC 2 cut(s) 812, 1226
BmiI GGNNCC 5 cut(s) 696, 813, 840, 1138, 1515
BmrFI CCNGG 1 cut(s) 1547
BmsI GCATC 4 cut(s) 470, 871, 1174, 1397
BpiI GAAGAC 3 cut(s) 205, 599, 1484
BpmI CTGGAG 1 cut(s) 1286
Bsa29I ATCGAT 1 cut(s) 996
BsaAI YACGTR 1 cut(s) 850
BsaI GGTCTC 2 cut(s) 284, 342
BsaJI CCNNGG 2 cut(s) 264, 1545
BsaWI WCCGGW 1 cut(s) 486
Bsc4I CCNNNNNNNGG 4 cut(s) 227, 300, 1339, 1340
Bse1I ACTGG 2 cut(s) 64, 1373
Bse3DI GCAATG 2 cut(s) 198, 1245
BseBI CCWGG 1 cut(s) 1547
BseCI ATCGAT 1 cut(s) 996
BseDI CCNNGG 2 cut(s) 264, 1545
BseGI GGATG 2 cut(s) 60, 934
BseLI CCNNNNNNNGG 4 cut(s) 227, 300, 1339, 1340
BseMI GCAATG 2 cut(s) 198, 1245
BseMII CTCAG 3 cut(s) 143, 353, 1519
BseNI ACTGG 2 cut(s) 64, 1373
BseRI GAGGAG 1 cut(s) 302
BseXI GCAGC 8 cut(s) 529, 578, 661, 1174, 1177, 1255, 1356, 1422
BseYI CCCAGC 1 cut(s) 1105
Bsh1236I CGCG 2 cut(s) 130, 1040
Bsh1285I CGRYCG 1 cut(s) 491
BshFI GGCC 1 cut(s) 814
BshVI ATCGAT 1 cut(s) 996
BsiEI CGRYCG 1 cut(s) 491
BsiHKAI GWGCWC 4 cut(s) 112, 486, 1038, 1506
BsiHKCI CYCGRG 1 cut(s) 417
BsiSI CCGG 1 cut(s) 487
BslFI GGGAC 3 cut(s) 317, 1426, 1473
BslI CCNNNNNNNGG 4 cut(s) 227, 300, 1339, 1340
BsmAI GTCTC 4 cut(s) 284, 342, 427, 461
BsmFI GGGAC 3 cut(s) 317, 1426, 1473
BsnI GGCC 1 cut(s) 814
Bso31I GGTCTC 2 cut(s) 284, 342
BsoBI CYCGRG 1 cut(s) 417
Bsp1286I GDGCHC 5 cut(s) 112, 486, 699, 1038, 1506
Bsp143I GATC 8 cut(s) 121, 141, 619, 634, 970, 1459, 1513, 1564
BspACI CCGC 5 cut(s) 14, 85, 130, 395, 1040
BspANI GGCC 1 cut(s) 814
BspCNI CTCAG 3 cut(s) 144, 352, 1518
BspDI ATCGAT 1 cut(s) 996
BspFNI CGCG 2 cut(s) 130, 1040
BspLI GGNNCC 5 cut(s) 696, 813, 840, 1138, 1515
BspMAI CTGCAG 1 cut(s) 1440
BspMI ACCTGC 1 cut(s) 302
BspPI GGATC 4 cut(s) 136, 627, 1508, 1521
BspTNI GGTCTC 2 cut(s) 284, 342
BsrDI GCAATG 2 cut(s) 198, 1245
BsrI ACTGG 2 cut(s) 64, 1373
BssECI CCNNGG 2 cut(s) 264, 1545
BssMI GATC 8 cut(s) 121, 141, 619, 634, 970, 1459, 1513, 1564
BssT1I CCWWGG 1 cut(s) 264
Bst2UI CCWGG 1 cut(s) 1547
Bst4CI ACNGT 3 cut(s) 283, 500, 574
Bst6I CTCTTC 2 cut(s) 195, 380
BstAPI GCANNNNNTGC 1 cut(s) 1156
BstBAI YACGTR 1 cut(s) 850
BstC8I GCNNGC 5 cut(s) 89, 965, 1038, 1148, 1314
BstDEI CTNAG 3 cut(s) 152, 339, 1505
BstENI CCTNNNNNAGG 1 cut(s) 298
BstF5I GGATG 2 cut(s) 60, 934
BstFNI CGCG 2 cut(s) 130, 1040
BstH2I RGCGCY 1 cut(s) 1210
BstHHI GCGC 3 cut(s) 461, 948, 1209
BstKTI GATC 8 cut(s) 124, 144, 622, 637, 973, 1462, 1516, 1567
BstMAI GTCTC 4 cut(s) 284, 342, 427, 461
BstMBI GATC 8 cut(s) 121, 141, 619, 634, 970, 1459, 1513, 1564
BstMCI CGRYCG 1 cut(s) 491
BstMWI GCNNNNNNNGC 4 cut(s) 881, 1156, 1547, 1556
BstNI CCWGG 1 cut(s) 1547
BstNSI RCATGY 6 cut(s) 245, 251, 432, 523, 1150, 1359
BstSCI CCNGG 1 cut(s) 1545
BstSFI CTRYAG 1 cut(s) 1436
BstUI CGCG 2 cut(s) 130, 1040
BstV1I GCAGC 8 cut(s) 529, 578, 661, 1174, 1177, 1255, 1356, 1422
BstV2I GAAGAC 3 cut(s) 205, 599, 1484
BstX2I RGATCY 2 cut(s) 619, 1513
BstYI RGATCY 2 cut(s) 619, 1513
Bsu15I ATCGAT 1 cut(s) 996
BsuRI GGCC 1 cut(s) 814
BsuTUI ATCGAT 1 cut(s) 996
BtsCI GGATG 2 cut(s) 60, 934
BtsI GCAGTG 2 cut(s) 1157, 1383
BtsIMutI CAGTG 5 cut(s) 279, 1157, 1380, 1383, 1513
BveI ACCTGC 1 cut(s) 302
Cac8I GCNNGC 5 cut(s) 89, 965, 1038, 1148, 1314
CaiI CAGNNNCTG 2 cut(s) 572, 1264
CfoI GCGC 3 cut(s) 461, 948, 1209
Cfr13I GGNCC 2 cut(s) 812, 1226
ClaI ATCGAT 1 cut(s) 996
Csp6I GTAC 3 cut(s) 182, 1081, 1403
CspCI CAANNNNNGTGG 2 cut(s) 1480, 1515
CviAII CATG 8 cut(s) 242, 248, 429, 520, 604, 1147, 1356, 1568
CviQI GTAC 3 cut(s) 182, 1081, 1403
DdeI CTNAG 3 cut(s) 152, 339, 1505
DpnI GATC 8 cut(s) 123, 143, 621, 636, 972, 1461, 1515, 1566
DpnII GATC 8 cut(s) 121, 141, 619, 634, 970, 1459, 1513, 1564
DriI GACNNNNNGTC 1 cut(s) 1485
Eam1104I CTCTTC 2 cut(s) 195, 380
Eam1105I GACNNNNNGTC 1 cut(s) 1485
EarI CTCTTC 2 cut(s) 195, 380
Ecl136II GAGCTC 3 cut(s) 484, 1036, 1504
Eco130I CCWWGG 1 cut(s) 264
Eco24I GRGCYC 4 cut(s) 486, 699, 1038, 1506
Eco31I GGTCTC 2 cut(s) 284, 342
Eco32I GATATC 1 cut(s) 601
Eco47I GGWCC 1 cut(s) 1226
Eco53kI GAGCTC 3 cut(s) 484, 1036, 1504
Eco57I CTGAAG 4 cut(s) 611, 897, 944, 1236
Eco88I CYCGRG 1 cut(s) 417
EcoICRI GAGCTC 3 cut(s) 484, 1036, 1504
EcoNI CCTNNNNNAGG 1 cut(s) 298
EcoO109I RGGNCCY 1 cut(s) 812
EcoRII CCWGG 1 cut(s) 1545
EcoRV GATATC 1 cut(s) 601
EcoT14I CCWWGG 1 cut(s) 264
EcoT38I GRGCYC 4 cut(s) 486, 699, 1038, 1506
ErhI CCWWGG 1 cut(s) 264
FaeI CATG 8 cut(s) 245, 251, 432, 523, 607, 1150, 1359, 1571
FaqI GGGAC 3 cut(s) 317, 1426, 1473
FatI CATG 8 cut(s) 241, 247, 428, 519, 603, 1146, 1355, 1567
FauNDI CATATG 1 cut(s) 223
FbaI TGATCA 4 cut(s) 634, 970, 1459, 1564
Fnu4HI GCNGC 9 cut(s) 396, 543, 567, 675, 1188, 1191, 1244, 1370, 1436
FokI GGATG 2 cut(s) 47, 941
FriOI GRGCYC 4 cut(s) 486, 699, 1038, 1506
Fsp4HI GCNGC 9 cut(s) 396, 543, 567, 675, 1188, 1191, 1244, 1370, 1436
FspBI CTAG 1 cut(s) 1585
GlaI GCGC 3 cut(s) 460, 947, 1208
GluI GCNGC 9 cut(s) 396, 543, 567, 675, 1188, 1191, 1244, 1370, 1436
GsaI CCCAGC 1 cut(s) 1109
GsuI CTGGAG 1 cut(s) 1286
HaeII RGCGCY 1 cut(s) 1210
HaeIII GGCC 1 cut(s) 814
HapII CCGG 1 cut(s) 487
HhaI GCGC 3 cut(s) 461, 948, 1209
Hin1II CATG 8 cut(s) 245, 251, 432, 523, 607, 1150, 1359, 1571
Hin6I GCGC 3 cut(s) 459, 946, 1207
HinP1I GCGC 3 cut(s) 459, 946, 1207
HindIII AAGCTT 1 cut(s) 965
HinfI GANTC 7 cut(s) 317, 420, 550, 641, 979, 993, 1177
HpaII CCGG 1 cut(s) 487
HphI GGTGA 2 cut(s) 365, 413
Hpy166II GTNNAC 2 cut(s) 411, 1171
Hpy188I TCNGA 8 cut(s) 24, 153, 342, 466, 591, 924, 1348, 1532
Hpy188III TCNNGA 8 cut(s) 512, 638, 863, 938, 1181, 1229, 1265, 1517
Hpy8I GTNNAC 2 cut(s) 411, 1171
HpyAV CCTTC 3 cut(s) 127, 659, 919
HpyCH4III ACNGT 3 cut(s) 283, 500, 574
HpyCH4IV ACGT 1 cut(s) 849
HpyF10VI GCNNNNNNNGC 4 cut(s) 881, 1156, 1547, 1556
HpyF3I CTNAG 3 cut(s) 152, 339, 1505
HpySE526I ACGT 1 cut(s) 849
Hsp92II CATG 8 cut(s) 245, 251, 432, 523, 607, 1150, 1359, 1571
HspAI GCGC 3 cut(s) 459, 946, 1207
Ksp22I TGATCA 4 cut(s) 634, 970, 1459, 1564
Kzo9I GATC 8 cut(s) 121, 141, 619, 634, 970, 1459, 1513, 1564
LmnI GCTCC 2 cut(s) 489, 694
Lsp1109I GCAGC 8 cut(s) 529, 578, 661, 1174, 1177, 1255, 1356, 1422
LweI GCATC 4 cut(s) 470, 871, 1174, 1397
MaeI CTAG 1 cut(s) 1585
MaeII ACGT 1 cut(s) 849
MaeIII GTNAC 3 cut(s) 66, 1017, 1381
MalI GATC 8 cut(s) 123, 143, 621, 636, 972, 1461, 1515, 1566
MboI GATC 8 cut(s) 121, 141, 619, 634, 970, 1459, 1513, 1564
MboII GAAGA 9 cut(s) 131, 205, 212, 397, 604, 890, 893, 1229, 1489
MfeI CAATTG 3 cut(s) 99, 888, 1560
MflI RGATCY 2 cut(s) 619, 1513
MhlI GDGCHC 5 cut(s) 112, 486, 699, 1038, 1506
MlyI GAGTC 2 cut(s) 326, 429
MseI TTAA 2 cut(s) 473, 1413
MslI CAYNNNNRTG 2 cut(s) 246, 524
MspA1I CMGCKG 2 cut(s) 366, 1105
MspI CCGG 1 cut(s) 487
MspR9I CCNGG 1 cut(s) 1547
MunI CAATTG 3 cut(s) 99, 888, 1560
MvaI CCWGG 1 cut(s) 1547
MvnI CGCG 2 cut(s) 130, 1040
MwoI GCNNNNNNNGC 4 cut(s) 881, 1156, 1547, 1556
NdeI CATATG 1 cut(s) 223
NdeII GATC 8 cut(s) 121, 141, 619, 634, 970, 1459, 1513, 1564
NlaIII CATG 8 cut(s) 245, 251, 432, 523, 607, 1150, 1359, 1571
NlaIV GGNNCC 5 cut(s) 696, 813, 840, 1138, 1515
NmuCI GTSAC 1 cut(s) 1381
NspI RCATGY 6 cut(s) 245, 251, 432, 523, 1150, 1359
PaeI GCATGC 1 cut(s) 1150
PciI ACATGT 2 cut(s) 247, 1355
PfeI GAWTC 5 cut(s) 550, 641, 979, 993, 1177
PflMI CCANNNNNTGG 1 cut(s) 227
PkrI GCNGC 9 cut(s) 397, 544, 568, 676, 1189, 1192, 1245, 1371, 1437
PleI GAGTC 2 cut(s) 325, 428
PpsI GAGTC 2 cut(s) 325, 428
Ppu21I YACGTR 1 cut(s) 850
PscI ACATGT 2 cut(s) 247, 1355
Psp124BI GAGCTC 3 cut(s) 486, 1038, 1506
Psp6I CCWGG 1 cut(s) 1545
PspFI CCCAGC 1 cut(s) 1105
PspGI CCWGG 1 cut(s) 1545
PspN4I GGNNCC 5 cut(s) 696, 813, 840, 1138, 1515
PspPI GGNCC 2 cut(s) 812, 1226
PstI CTGCAG 1 cut(s) 1440
PstNI CAGNNNCTG 2 cut(s) 572, 1264
PsuI RGATCY 2 cut(s) 619, 1513
PvuII CAGCTG 2 cut(s) 366, 1105
RsaI GTAC 3 cut(s) 183, 1082, 1404
RsaNI GTAC 3 cut(s) 182, 1081, 1403
RseI CAYNNNNRTG 2 cut(s) 246, 524
SacI GAGCTC 3 cut(s) 486, 1038, 1506
SaqAI TTAA 2 cut(s) 473, 1413
SatI GCNGC 9 cut(s) 396, 543, 567, 675, 1188, 1191, 1244, 1370, 1436
Sau3AI GATC 8 cut(s) 121, 141, 619, 634, 970, 1459, 1513, 1564
Sau96I GGNCC 2 cut(s) 812, 1226
SchI GAGTC 2 cut(s) 326, 429
ScrFI CCNGG 1 cut(s) 1547
SduI GDGCHC 5 cut(s) 112, 486, 699, 1038, 1506
SfaNI GCATC 4 cut(s) 470, 871, 1174, 1397
SfcI CTRYAG 1 cut(s) 1436
SinI GGWCC 1 cut(s) 1226
SmiMI CAYNNNNRTG 2 cut(s) 246, 524
SphI GCATGC 1 cut(s) 1150
SsiI CCGC 5 cut(s) 14, 85, 130, 395, 1040
SspMI CTAG 1 cut(s) 1585
SstI GAGCTC 3 cut(s) 486, 1038, 1506
StyD4I CCNGG 1 cut(s) 1545
StyI CCWWGG 1 cut(s) 264
TaaI ACNGT 3 cut(s) 283, 500, 574
TaiI ACGT 1 cut(s) 852
TaqI TCGA 9 cut(s) 124, 491, 576, 649, 862, 996, 1063, 1175, 1297
TatI WGTACW 1 cut(s) 1080
TauI GCSGC 1 cut(s) 398
TfiI GAWTC 5 cut(s) 550, 641, 979, 993, 1177
Tru1I TTAA 2 cut(s) 473, 1413
Tru9I TTAA 2 cut(s) 473, 1413
TscAI CASTG 5 cut(s) 286, 1157, 1380, 1390, 1513
TseFI GTSAC 1 cut(s) 1381
TseI GCWGC 8 cut(s) 542, 566, 674, 1187, 1190, 1243, 1369, 1435
Tsp45I GTSAC 1 cut(s) 1381
TspDTI ATGAA 4 cut(s) 24, 205, 431, 945
TspGWI ACGGA 1 cut(s) 845
TspRI CASTG 5 cut(s) 286, 1157, 1380, 1390, 1513
Van91I CCANNNNNTGG 1 cut(s) 227
VpaK11BI GGWCC 1 cut(s) 1226
XagI CCTNNNNNAGG 1 cut(s) 298
XapI RAATTY 3 cut(s) 560, 932, 1220
XceI RCATGY 6 cut(s) 245, 251, 432, 523, 1150, 1359
XspI CTAG 1 cut(s) 1585
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.