Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0002203

Physical Location & Seq

Genomic Coordinates Forward (+)

46009907 .. 46016053

Gene Structure 6147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0286600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2427 bp

ATGGCTGCAAATTCACTTCCAATACTATATGCTCTTGTTCTCGCACTGAGCCTGTTCGCGTTTCAATCCGAGTCGGCGCCTCAAGCTTTCCGGAGAGATCCAGGTCACCCTCAGTGGCACCACGGCGCCTTCCACGACGTCCGTGACACCATTCGCTCCGATGTCCGCCGCATGCTCCATTCTCGCGCCGAGGTGCCGTTCCAGGTTCCACTGGAAGTGAATGTGGTGCTTGTTGGTTTCAATGGTGATGGAGGCTATAGGTACTCGGTGGACGCGCACAAATTGGAGGAGTTGCTCAAGATCAGCTTCCCGACGCACCGTCCGGCGTGTCTTGAGACCGGGGAGGCTCTTGATATCGAGCATCAAATTGTCTACAATGCCTTCCCTGCTGGGCAGCCGGAGCTTATAGCTCTCGAGAAGGCTTTGAAAGAGGCGATGGTTCCTGCAGGAAATGCGAGAGAGACTGAATTTGGAAGGGAAGTGCCTCTATTTGAGGTGGATGCAACTGTAGTGGAGCCGGTATTTCAGAGGTTGTATTCCTATATATTCGACACAGACAATTCGGCTGTTTCTGCTATGGAGTTGGATCGCCAAGTGCCAAGTGCAATATTTGTGGTCAATTTTGATAAGGTCAGAATGGATCCTAGGAATAAGGAAATTGATCTTGACAACTTGATGTATGGAAAAATTACACAACTAACTGAGGATGATATGCAAAAACAAGAGGGAGACTATATTTATCGCTATCGGTACAATGGAGGAGGTGCCTCTCAAGTTTGGCTGGGCTATGGCAGATATGTAGTGATCGATCTCTCGGCCGGCCCGTGTACTTATGGAAAGATCGAAACTGAAGAGGGAACTGTCAGTTCTCGGACCCTGCCACGACTACGGAATATTATGTTTCCAAGAGGAATGGGTGCAGCTAGTGATCACTCTACACATGATGTATTTGTTGGACAACTTGCCTCTCTAGTATCCACCACGATTGAGCATGTTATAGCTCCAGATGTTAGATTTGAAACTGTTGATCTGACAACGAGGCTGCTTTTACCAATAATTGTGCTGCAAAATCATAATCGGTACAATATTATAGAGAAGGGCCACAACTACAGTATAAATATTGAAGCAATTGAGGCACAGGTGAAGAAAATGATTCATGATGGGCAAGAAGTTGTGATTGTTGGGGGTTCACATTCATTACATCGCCATGAGAAGTTGGCAATTGCCGTTTCAAAAGCTATGCGAGGCCATTCCCTTCAAGAAACTAGGAATGATGGACGCTTTCATGTTCATACCAAGACATATCTGGATGGTGCTCTTCTTAAAGAAGAGATGGAACGTTCTGCTGATGTGCTTGCTGCTGGTTTGCTTGAGGTGGCTGACCCATCTCTTTCGAGTAAATTTTTCCTCCGCCAGCATTGGAATGATGAATCTATTGGTGCAAGTGATTCTATACTCAAACATAAACCTCTTTGGTCTACTTATGACAAAAAAGTTGGCAAGAAGAAAAAGAAAAAAGAAAGGAAACAGGGAGATCTGTACCGAACTTATGGAACAAGAGTAATTCCTGTCTTTGTGCTATCATTGGCTGATGTGGACCCACACCTTATGATGGAAGACGAAAGTCTTGTATGGACAAGCAAAGATGTCGTGATTGTACTTGAGCATCAAAATCAGCAGATACCTCTTAGTTATGTGTCAGAAACACAGAGAAGGCATGCCGAACCATCTCAGGTACAGCGCCATATATTGGCAGGGCTTGCTTCTGCTGTGGCAGGGTTGAGTGCACCATATGAGAAGGCTTCTCATGTACATGAAAGGCCAGTCGTGAATTGGCTATGGGCAGCTGGGTGTCATCCATTTGGACCATTCTCTAATACTTCTAAAGTCAGCCAAATGCTTCAAGATGTTGCATTGAGGAACTCAATATATGCGCGTGTAGATTCTGCACTCCACAAAATCCGTGATACGTCAGAGGCTGTACAAACATTTGCTGCCGAGTATCTTAAAACTCCGCTTGGTGAGCCAGTGAAGGGCAAGAAGAACAAAACCACCACTGAGCTATGGGTGGAGAAGTTTTACAAGAAGACCACTAACTTGCCTGAACCTTTCCCACATGAATTAGTTGATAGATTGGAGAACTTCTTAAATAACCTTGAGGAACAGCTAGTAGATTTGTCTTCGTCGTTGTATGGTCACCGGCTACAAGATGCACATTTCAACAGTTCTGAGATTCTCCAGAGTTCCATATTTACCCAGCAGTACGTAGATCATGTTTTGTCAAACGAGAGGGAAAAGATGAAATGCTGCAACATTGAGTACAAATATCCTGTGCAGTCATCTCAAACTTATGTCTATGGGGGGATTCTTCTTGCTGGATTCGTTGTATATTTTATTGTCATTTTCTTTTCAAACCCTGTACGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0008150 GO:0010035 GO:0010038 GO:0016020 GO:0019220 GO:0019222 GO:0031323 GO:0042221 GO:0042325 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050789 GO:0050794 GO:0050896 GO:0051174 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04113 ko04114 ko04151 ko04152 ko04261 ko04350 ko04390 ko04391 ko04530 ko04728 ko04730 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04113 map04114 map04151 map04152 map04261 map04350 map04390 map04391 map04530 map04728 map04730 map05142 map05160 map05165

Pfam Domains

Protein Families

HEAT HEAT_2

Protein Analysis

808

Amino Acids

91.4

Weight (kDa)

6.24

Isoelectric Point (pI)

43.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7906	PF25483	69 - 335	2.2e-57	Domain of unknown function (DUF7906)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13320 AT1G13320 AT1G13320 AT1G25490 AT3G25800 AT3G25800 AT3G25800
fragaria_vesca	FvH4_4g27700 FvH4_4g27700 FvH4_5g12331 FvH4_5g12331
malus_domestica	MD06G1214700.v1.1 MD13G1044500.v1.1 MD14G1225600.v1.1 MD16G1045400.v1.1
prunus_persica	Prupe.1G307900_v2.0.a1 Prupe.1G307900_v2.0.a1 Prupe.5G220100_v2.0.a1
pyrus_communis	pycom06g19130 pycom13g03910 pycom14g18680 pycom16g03990
rosa_chinensis	RchiOBHm_Chr4g0435561 RchiOBHm_Chr7g0185211
rosa_laevigata	RLG00000006582
rosa_multiflora	Rmu_sc0001940.1_g000038
rosa_roxburghii	Rroxscaffold_3G00269150 Rroxscaffold_5G00376790
rosa_rugosa	Rorug04G0286500 Rorug04G0286500 Rorug04G0286600 Rorug06G0466800 Rorug06G0466900
rosa_samantha	Rh4AG342000 Rh4BG350200 Rh4CG364900 Rh4DG344500 Rh7AG076000 Rh7BG071300 Rh7CG072600 Rh7DG072000
rosa_wichuraiana	Rw4G029830 Rw7G005990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	141
AccB1I	GGYRCC	5 cut(s)	76, 117, 125, 193, 764
AccB7I	CCANNNNNTGG	1 cut(s)	1750
AccI	GTMKAC	2 cut(s)	372, 1478
AccII	CGCG	4 cut(s)	59, 186, 275, 1936
AccIII	TCCGGA	1 cut(s)	90
AciI	CCGC	4 cut(s)	166, 169, 1411, 2015
AclI	AACGTT	1 cut(s)	1339
AclWI	GGATC	4 cut(s)	92, 594, 635, 648
AcoI	YGGCCR	1 cut(s)	816
AcsI	RAATTY	3 cut(s)	10, 467, 1400
AcuI	CTGAAG	1 cut(s)	870
AcyI	GRCGYC	3 cut(s)	77, 126, 138
AfiI	CCNNNNNNNGG	3 cut(s)	1612, 1750, 2033
AhdI	GACNNNNNGTC	1 cut(s)	318
AjnI	CCWGG	2 cut(s)	100, 201
Alw21I	GWGCWC	2 cut(s)	1318, 1789
Alw26I	GTCTC	3 cut(s)	329, 455, 723
Alw44I	GTGCAC	1 cut(s)	1785
AlwI	GGATC	4 cut(s)	92, 594, 635, 648
AlwNI	CAGNNNCTG	1 cut(s)	1979
Ama87I	CYCGRG	1 cut(s)	413
Aor13HI	TCCGGA	1 cut(s)	90
AoxI	GGCC	5 cut(s)	816, 820, 1099, 1246, 1820
ApaLI	GTGCAC	1 cut(s)	1785
ApeKI	GCWGC	9 cut(s)	5, 394, 920, 1042, 1063, 1358, 1844, 1994, 2307
ApoI	RAATTY	3 cut(s)	10, 467, 1400
AspA2I	CCTAGG	1 cut(s)	644
AspLEI	GCGC	6 cut(s)	79, 128, 188, 277, 1743, 1936
AspS9I	GGNCC	5 cut(s)	821, 873, 1099, 1597, 1865
AsuC2I	CCSGG	1 cut(s)	340
AsuHPI	GGTGA	5 cut(s)	98, 257, 1153, 2033, 2189
AvaI	CYCGRG	1 cut(s)	413
AvaII	GGWCC	3 cut(s)	873, 1597, 1865
AvrII	CCTAGG	1 cut(s)	644
BaeGI	GKGCMC	1 cut(s)	1789
BamHI	GGATCC	1 cut(s)	640
BanI	GGYRCC	5 cut(s)	76, 117, 125, 193, 764
BbsI	GAAGAC	3 cut(s)	1623, 2093, 2172
Bbv12I	GWGCWC	2 cut(s)	1318, 1789
BbvI	GCAGC	8 cut(s)	406, 932, 1029, 1050, 1345, 1856, 1981, 2294
BccI	CCATC	9 cut(s)	242, 430, 1154, 1268, 1304, 1327, 1393, 1606, 1735
BceAI	ACGGC	3 cut(s)	139, 181, 1211
BcgI	CGANNNNNNTGC	2 cut(s)	1630, 1664
BciT130I	CCWGG	2 cut(s)	102, 203
BciVI	GTATCC	1 cut(s)	985
BclI	TGATCA	1 cut(s)	928
BcnI	CCSGG	1 cut(s)	340
BcoDI	GTCTC	3 cut(s)	329, 455, 723
BfaI	CTAG	5 cut(s)	645, 924, 971, 1266, 2168
BfmI	CTRYAG	4 cut(s)	256, 444, 507, 1108
BfoI	RGCGCY	3 cut(s)	80, 129, 1744
BfuI	GTATCC	1 cut(s)	985
BglII	AGATCT	1 cut(s)	1534
BlnI	CCTAGG	1 cut(s)	644
Bme1390I	CCNGG	3 cut(s)	102, 203, 340
Bme18I	GGWCC	3 cut(s)	873, 1597, 1865
BmeRI	GACNNNNNGTC	1 cut(s)	318
BmeT110I	CYCGRG	1 cut(s)	413
BmgT120I	GGNCC	5 cut(s)	821, 873, 1099, 1597, 1865
BmrFI	CCNGG	3 cut(s)	102, 203, 340
BmsI	GCATC	4 cut(s)	370, 490, 1675, 2200
BoxI	GACNNNNGTC	1 cut(s)	1623
BpiI	GAAGAC	3 cut(s)	1623, 2093, 2172
BpmI	CTGGAG	2 cut(s)	987, 2222
BpuEI	CTTGAG	7 cut(s)	66, 281, 353, 756, 1391, 1682, 2177
BpuMI	CCSGG	1 cut(s)	340
Bsa29I	ATCGAT	1 cut(s)	807
BsaAI	YACGTR	1 cut(s)	2266
BsaHI	GRCGYC	3 cut(s)	77, 126, 138
BsaI	GGTCTC	1 cut(s)	329
BsaJI	CCNNGG	4 cut(s)	121, 189, 339, 644
BsaWI	WCCGGW	1 cut(s)	90
Bsc4I	CCNNNNNNNGG	3 cut(s)	1612, 1750, 2033
Bse118I	RCCGGY	3 cut(s)	517, 818, 2199
Bse1I	ACTGG	3 cut(s)	216, 1823, 2027
BseAI	TCCGGA	1 cut(s)	90
BseBI	CCWGG	2 cut(s)	102, 203
BseCI	ATCGAT	1 cut(s)	807
BseDI	CCNNGG	4 cut(s)	121, 189, 339, 644
BseGI	GGATG	4 cut(s)	505, 712, 1315, 1855
BseLI	CCNNNNNNNGG	3 cut(s)	1612, 1750, 2033
BseMII	CTCAG	6 cut(s)	38, 125, 693, 1745, 2049, 2220
BseNI	ACTGG	3 cut(s)	216, 1823, 2027
BseRI	GAGGAG	2 cut(s)	302, 774
BseSI	GKGCMC	1 cut(s)	1789
BseX3I	CGGCCG	1 cut(s)	816
BseXI	GCAGC	8 cut(s)	406, 932, 1029, 1050, 1345, 1856, 1981, 2294
BseYI	CCCAGC	4 cut(s)	389, 781, 1847, 2256
BsgI	GTGCAG	3 cut(s)	939, 1932, 2354
Bsh1236I	CGCG	4 cut(s)	59, 186, 275, 1936
Bsh1285I	CGRYCG	1 cut(s)	819
BshFI	GGCC	5 cut(s)	818, 822, 1101, 1248, 1822
BshNI	GGYRCC	5 cut(s)	76, 117, 125, 193, 764
BshVI	ATCGAT	1 cut(s)	807
BsiEI	CGRYCG	1 cut(s)	819
BsiHKAI	GWGCWC	2 cut(s)	1318, 1789
BsiHKCI	CYCGRG	1 cut(s)	413
BsiSI	CCGG	7 cut(s)	91, 323, 339, 398, 518, 819, 2200
BslI	CCNNNNNNNGG	3 cut(s)	1612, 1750, 2033
BsmAI	GTCTC	3 cut(s)	329, 455, 723
BsnI	GGCC	5 cut(s)	818, 822, 1101, 1248, 1822
Bso31I	GGTCTC	1 cut(s)	329
BsoBI	CYCGRG	1 cut(s)	413
Bsp1286I	GDGCHC	2 cut(s)	1318, 1789
Bsp13I	TCCGGA	1 cut(s)	90
Bsp1407I	TGTACA	2 cut(s)	1810, 1981
BspACI	CCGC	4 cut(s)	166, 169, 1411, 2015
BspANI	GGCC	5 cut(s)	818, 822, 1101, 1248, 1822
BspCNI	CTCAG	6 cut(s)	39, 124, 694, 1744, 2050, 2221
BspDI	ATCGAT	1 cut(s)	807
BspEI	TCCGGA	1 cut(s)	90
BspFNI	CGCG	4 cut(s)	59, 186, 275, 1936
BspHI	TCATGA	1 cut(s)	1156
BspMAI	CTGCAG	1 cut(s)	448
BspPI	GGATC	4 cut(s)	92, 594, 635, 648
BspQI	GCTCTTC	1 cut(s)	1323
BspT107I	GGYRCC	5 cut(s)	76, 117, 125, 193, 764
BspTNI	GGTCTC	1 cut(s)	329
BsrFI	RCCGGY	3 cut(s)	517, 818, 2199
BsrGI	TGTACA	2 cut(s)	1810, 1981
BsrI	ACTGG	3 cut(s)	216, 1823, 2027
BssAI	RCCGGY	3 cut(s)	517, 818, 2199
BssECI	CCNNGG	4 cut(s)	121, 189, 339, 644
BssNI	GRCGYC	3 cut(s)	77, 126, 138
BssT1I	CCWWGG	1 cut(s)	644
Bst2UI	CCWGG	2 cut(s)	102, 203
Bst4CI	ACNGT	6 cut(s)	320, 508, 862, 1024, 1112, 2225
Bst6I	CTCTTC	3 cut(s)	846, 1323, 1323
BstACI	GRCGYC	3 cut(s)	77, 126, 138
BstAPI	GCANNNNNTGC	2 cut(s)	452, 1760
BstAUI	TGTACA	2 cut(s)	1810, 1981
BstBAI	YACGTR	1 cut(s)	2266
BstC8I	GCNNGC	6 cut(s)	173, 820, 1356, 1415, 1719, 1761
BstDEI	CTNAG	7 cut(s)	47, 111, 702, 1688, 1731, 2058, 2229
BstDSI	CCRYGG	1 cut(s)	121
BstEII	GGTNACC	2 cut(s)	104, 2195
BstF5I	GGATG	4 cut(s)	505, 712, 1315, 1855
BstFNI	CGCG	4 cut(s)	59, 186, 275, 1936
BstH2I	RGCGCY	3 cut(s)	80, 129, 1744
BstHHI	GCGC	6 cut(s)	79, 128, 188, 277, 1743, 1936
BstMAI	GTCTC	3 cut(s)	329, 455, 723
BstMCI	CGRYCG	1 cut(s)	819
BstMWI	GCNNNNNNNGC	8 cut(s)	83, 386, 400, 452, 572, 1133, 1760, 2023
BstNI	CCWGG	2 cut(s)	102, 203
BstNSI	RCATGY	3 cut(s)	175, 995, 1721
BstPAI	GACNNNNGTC	1 cut(s)	1623
BstPI	GGTNACC	2 cut(s)	104, 2195
BstSCI	CCNGG	3 cut(s)	100, 201, 338
BstSFI	CTRYAG	4 cut(s)	256, 444, 507, 1108
BstSLI	GKGCMC	1 cut(s)	1789
BstSNI	TACGTA	1 cut(s)	2266
BstUI	CGCG	4 cut(s)	59, 186, 275, 1936
BstV1I	GCAGC	8 cut(s)	406, 932, 1029, 1050, 1345, 1856, 1981, 2294
BstV2I	GAAGAC	3 cut(s)	1623, 2093, 2172
BstX2I	RGATCY	3 cut(s)	97, 640, 1534
BstYI	RGATCY	3 cut(s)	97, 640, 1534
BstZI	CGGCCG	1 cut(s)	816
Bsu15I	ATCGAT	1 cut(s)	807
BsuI	GTATCC	1 cut(s)	985
BsuRI	GGCC	5 cut(s)	818, 822, 1101, 1248, 1822
BsuTUI	ATCGAT	1 cut(s)	807
BtgI	CCRYGG	1 cut(s)	121
BtgZI	GCGATG	2 cut(s)	449, 1187
BtsCI	GGATG	4 cut(s)	505, 712, 1315, 1855
BtsIMutI	CAGTG	5 cut(s)	44, 119, 209, 2034, 2055
Cac8I	GCNNGC	6 cut(s)	173, 820, 1356, 1415, 1719, 1761
CaiI	CAGNNNCTG	1 cut(s)	1979
CciI	TCATGA	1 cut(s)	1156
CfoI	GCGC	6 cut(s)	79, 128, 188, 277, 1743, 1936
Cfr10I	RCCGGY	3 cut(s)	517, 818, 2199
Cfr13I	GGNCC	5 cut(s)	821, 873, 1099, 1597, 1865
ClaI	ATCGAT	1 cut(s)	807
CseI	GACGC	3 cut(s)	281, 322, 1287
CspCI	CAANNNNNGTGG	6 cut(s)	492, 527, 594, 629, 967, 1002
DdeI	CTNAG	7 cut(s)	47, 111, 702, 1688, 1731, 2058, 2229
DinI	GGCGCC	2 cut(s)	78, 127
DriI	GACNNNNNGTC	1 cut(s)	318
EaeI	YGGCCR	1 cut(s)	816
EagI	CGGCCG	1 cut(s)	816
Eam1104I	CTCTTC	3 cut(s)	846, 1323, 1323
Eam1105I	GACNNNNNGTC	1 cut(s)	318
EarI	CTCTTC	3 cut(s)	846, 1323, 1323
EciI	GGCGGA	2 cut(s)	155, 1400
EclXI	CGGCCG	1 cut(s)	816
Eco105I	TACGTA	1 cut(s)	2266
Eco130I	CCWWGG	1 cut(s)	644
Eco31I	GGTCTC	1 cut(s)	329
Eco32I	GATATC	1 cut(s)	355
Eco47I	GGWCC	3 cut(s)	873, 1597, 1865
Eco52I	CGGCCG	1 cut(s)	816
Eco57I	CTGAAG	1 cut(s)	870
Eco88I	CYCGRG	1 cut(s)	413
Eco91I	GGTNACC	2 cut(s)	104, 2195
EcoO65I	GGTNACC	2 cut(s)	104, 2195
EcoRII	CCWGG	2 cut(s)	100, 201
EcoRV	GATATC	1 cut(s)	355
EcoT14I	CCWWGG	1 cut(s)	644
EgeI	GGCGCC	2 cut(s)	78, 127
EheI	GGCGCC	2 cut(s)	78, 127
ErhI	CCWWGG	1 cut(s)	644
FalI	AAGNNNNNCTT	2 cut(s)	290, 322
FauNDI	CATATG	1 cut(s)	1792
FbaI	TGATCA	1 cut(s)	928
FblI	GTMKAC	2 cut(s)	372, 1478
FokI	GGATG	4 cut(s)	512, 719, 1322, 1842
FseI	GGCCGGCC	1 cut(s)	822
FspBI	CTAG	5 cut(s)	645, 924, 971, 1266, 2168
GlaI	GCGC	6 cut(s)	78, 127, 187, 276, 1742, 1935
GsaI	CCCAGC	4 cut(s)	393, 785, 1851, 2260
GsuI	CTGGAG	2 cut(s)	987, 2222
HaeII	RGCGCY	3 cut(s)	80, 129, 1744
HaeIII	GGCC	5 cut(s)	818, 822, 1101, 1248, 1822
HapII	CCGG	7 cut(s)	91, 323, 339, 398, 518, 819, 2200
HgaI	GACGC	3 cut(s)	281, 322, 1287
HhaI	GCGC	6 cut(s)	79, 128, 188, 277, 1743, 1936
Hin1I	GRCGYC	3 cut(s)	77, 126, 138
Hin6I	GCGC	6 cut(s)	77, 126, 186, 275, 1741, 1934
HinP1I	GCGC	6 cut(s)	77, 126, 186, 275, 1741, 1934
HindIII	AAGCTT	1 cut(s)	84
HinfI	GANTC	8 cut(s)	71, 1153, 1430, 1448, 1943, 2233, 2365, 2379
HpaII	CCGG	7 cut(s)	91, 323, 339, 398, 518, 819, 2200
HphI	GGTGA	5 cut(s)	98, 257, 1153, 2033, 2189
Hpy166II	GTNNAC	7 cut(s)	271, 373, 828, 1190, 1479, 1597, 1787
Hpy188I	TCNGA	9 cut(s)	70, 160, 528, 635, 873, 1032, 1702, 1975, 2230
Hpy8I	GTNNAC	7 cut(s)	271, 373, 828, 1190, 1479, 1597, 1787
Hpy99I	CGWCG	3 cut(s)	140, 316, 2188
HpyAV	CCTTC	9 cut(s)	139, 391, 412, 468, 1090, 1265, 1707, 1792, 2026
HpyCH4III	ACNGT	6 cut(s)	320, 508, 862, 1024, 1112, 2225
HpyCH4IV	ACGT	4 cut(s)	138, 1339, 1970, 2265
HpyF10VI	GCNNNNNNNGC	8 cut(s)	83, 386, 400, 452, 572, 1133, 1760, 2023
HpyF3I	CTNAG	7 cut(s)	47, 111, 702, 1688, 1731, 2058, 2229
HpySE526I	ACGT	4 cut(s)	138, 1339, 1970, 2265
Hsp92I	GRCGYC	3 cut(s)	77, 126, 138
HspAI	GCGC	6 cut(s)	77, 126, 186, 275, 1741, 1934
KasI	GGCGCC	2 cut(s)	76, 125
Kpn2I	TCCGGA	1 cut(s)	90
KroI	GCCGGC	1 cut(s)	818
KroNI	GCCGGC	1 cut(s)	820
Ksp22I	TGATCA	1 cut(s)	928
LguI	GCTCTTC	1 cut(s)	1323
LmnI	GCTCC	5 cut(s)	161, 180, 400, 514, 1006
Lsp1109I	GCAGC	8 cut(s)	406, 932, 1029, 1050, 1345, 1856, 1981, 2294
LweI	GCATC	4 cut(s)	370, 490, 1675, 2200
MaeI	CTAG	5 cut(s)	645, 924, 971, 1266, 2168
MaeII	ACGT	4 cut(s)	138, 1339, 1970, 2265
MaeIII	GTNAC	3 cut(s)	104, 143, 2195
MfeI	CAATTG	2 cut(s)	1128, 1221
MflI	RGATCY	3 cut(s)	97, 640, 1534
MhlI	GDGCHC	2 cut(s)	1318, 1789
Mly113I	GGCGCC	2 cut(s)	77, 126
MlyI	GAGTC	1 cut(s)	80
MmeI	TCCRAC	2 cut(s)	564, 934
MroI	TCCGGA	1 cut(s)	90
MroNI	GCCGGC	1 cut(s)	818
MseI	TTAA	3 cut(s)	1323, 2007, 2147
MslI	CAYNNNNRTG	3 cut(s)	1206, 1422, 1812
MspA1I	CMGCKG	1 cut(s)	1847
MspI	CCGG	7 cut(s)	91, 323, 339, 398, 518, 819, 2200
MspR9I	CCNGG	3 cut(s)	102, 203, 340
MunI	CAATTG	2 cut(s)	1128, 1221
MvaI	CCWGG	2 cut(s)	102, 203
MvnI	CGCG	4 cut(s)	59, 186, 275, 1936
MwoI	GCNNNNNNNGC	8 cut(s)	83, 386, 400, 452, 572, 1133, 1760, 2023
NaeI	GCCGGC	1 cut(s)	820
NarI	GGCGCC	2 cut(s)	77, 126
NciI	CCSGG	1 cut(s)	340
NdeI	CATATG	1 cut(s)	1792
NgoMIV	GCCGGC	1 cut(s)	818
NmeAIII	GCCGAG	3 cut(s)	214, 794, 2023
NmuCI	GTSAC	3 cut(s)	104, 143, 2195
NspI	RCATGY	3 cut(s)	175, 995, 1721
PaeI	GCATGC	2 cut(s)	175, 1721
PaeR7I	CTCGAG	1 cut(s)	413
PagI	TCATGA	1 cut(s)	1156
PciSI	GCTCTTC	1 cut(s)	1323
PcsI	WCGNNNNNNNCGW	1 cut(s)	821
PdiI	GCCGGC	1 cut(s)	820
PfeI	GAWTC	7 cut(s)	1153, 1430, 1448, 1943, 2233, 2365, 2379
PflMI	CCANNNNNTGG	1 cut(s)	1750
PleI	GAGTC	1 cut(s)	79
PluTI	GGCGCC	2 cut(s)	80, 129
PpsI	GAGTC	1 cut(s)	79
Ppu21I	YACGTR	1 cut(s)	2266
PshAI	GACNNNNGTC	1 cut(s)	1623
Psp1406I	AACGTT	1 cut(s)	1339
Psp6I	CCWGG	2 cut(s)	100, 201
PspEI	GGTNACC	2 cut(s)	104, 2195
PspFI	CCCAGC	4 cut(s)	389, 781, 1847, 2256
PspGI	CCWGG	2 cut(s)	100, 201
PspPI	GGNCC	5 cut(s)	821, 873, 1099, 1597, 1865
PstI	CTGCAG	1 cut(s)	448
PstNI	CAGNNNCTG	1 cut(s)	1979
PsuI	RGATCY	3 cut(s)	97, 640, 1534
PvuII	CAGCTG	1 cut(s)	1847
RigI	GGCCGGCC	1 cut(s)	822
RseI	CAYNNNNRTG	3 cut(s)	1206, 1422, 1812
SapI	GCTCTTC	1 cut(s)	1323
SaqAI	TTAA	3 cut(s)	1323, 2007, 2147
Sau96I	GGNCC	5 cut(s)	821, 873, 1099, 1597, 1865
SbfI	CCTGCAGG	1 cut(s)	448
SchI	GAGTC	1 cut(s)	80
ScrFI	CCNGG	3 cut(s)	102, 203, 340
SdaI	CCTGCAGG	1 cut(s)	448
SduI	GDGCHC	2 cut(s)	1318, 1789
SfaNI	GCATC	4 cut(s)	370, 490, 1675, 2200
SfcI	CTRYAG	4 cut(s)	256, 444, 507, 1108
SfoI	GGCGCC	2 cut(s)	78, 127
Sfr274I	CTCGAG	1 cut(s)	413
SinI	GGWCC	3 cut(s)	873, 1597, 1865
SlaI	CTCGAG	1 cut(s)	413
SmiMI	CAYNNNNRTG	3 cut(s)	1206, 1422, 1812
SmlI	CTYRAG	8 cut(s)	81, 296, 332, 413, 771, 1370, 1661, 2156
SmoI	CTYRAG	8 cut(s)	81, 296, 332, 413, 771, 1370, 1661, 2156
SnaBI	TACGTA	1 cut(s)	2266
SphI	GCATGC	2 cut(s)	175, 1721
Sse8387I	CCTGCAGG	1 cut(s)	448
SsiI	CCGC	4 cut(s)	166, 169, 1411, 2015
SspDI	GGCGCC	2 cut(s)	76, 125
SspI	AATATT	4 cut(s)	609, 895, 1087, 1120
SspMI	CTAG	5 cut(s)	645, 924, 971, 1266, 2168
StyD4I	CCNGG	3 cut(s)	100, 201, 338
StyI	CCWWGG	1 cut(s)	644
TaaI	ACNGT	6 cut(s)	320, 508, 862, 1024, 1112, 2225
TaiI	ACGT	4 cut(s)	141, 1342, 1973, 2268
TaqI	TCGA	6 cut(s)	357, 414, 549, 807, 843, 1394
TatI	WGTACW	5 cut(s)	827, 1657, 1810, 1981, 2319
TauI	GCSGC	1 cut(s)	171
TfiI	GAWTC	7 cut(s)	1153, 1430, 1448, 1943, 2233, 2365, 2379
Tru1I	TTAA	3 cut(s)	1323, 2007, 2147
Tru9I	TTAA	3 cut(s)	1323, 2007, 2147
TscAI	CASTG	5 cut(s)	51, 119, 216, 2034, 2062
TseFI	GTSAC	3 cut(s)	104, 143, 2195
TseI	GCWGC	9 cut(s)	5, 394, 920, 1042, 1063, 1358, 1844, 1994, 2307
Tsp45I	GTSAC	3 cut(s)	104, 143, 2195
TspDTI	ATGAA	8 cut(s)	1145, 1185, 1274, 1280, 1443, 1830, 2133, 2315
TspGWI	ACGGA	3 cut(s)	131, 904, 1952
TspRI	CASTG	5 cut(s)	51, 119, 216, 2034, 2062
Van91I	CCANNNNNTGG	1 cut(s)	1750
VneI	GTGCAC	1 cut(s)	1785
VpaK11BI	GGWCC	3 cut(s)	873, 1597, 1865
XapI	RAATTY	3 cut(s)	10, 467, 1400
XceI	RCATGY	3 cut(s)	175, 995, 1721
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1303, 1830
XhoI	CTCGAG	1 cut(s)	413
XmaJI	CCTAGG	1 cut(s)	644
XmiI	GTMKAC	2 cut(s)	372, 1478
XspI	CTAG	5 cut(s)	645, 924, 971, 1266, 2168
ZraI	GACGTC	1 cut(s)	139

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.