Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0002203

Physical Location & Seq

Genomic Coordinates Reverse (-)

34730048 .. 34734593

Gene Structure 4546 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1214700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGCTATGGTTGATGAAACCTTGTACCCGATCGCGGTTTTAATCGATGAGCTGAAGAACGAAGACATTAAGCTCCGTTTGAACTCAATCCGGAGGATTTCCACGATTGCCCGTGCACTCGGGGAAGAGAGGACCAGGAAGGAACTGATTCCTTTCCTCAGCGAGAACAACGATGACGATGATGAAGTGCTGCTGGCAATGGCGGAAGAGTTGGGGGTGTTTATCCCCTATGTGGGTGGTGTGGATCATGCCAACGTTCTGCTCCCGCCTTTGGAAACGCTCTGCACAGTTGAGGAAACATGTGTGAGGGACAAGGCGGTGGATTCGTTGTGTAAAATTGGCGGGCAGATGAGAGAAAAGGACTTGGTTGAATATTTCATTCCTTTGGTTAAGAGACTTGCTGCCGGAGAATGGTTTACAGCCCGAGTTTCATCCTGCGGTTTGTTTCATATTGCTTATCCTAGTGCCCCAGAAACTTTAAAAACGGAACTACGGACGACATACAGTCAACTGTGCCAAGATGACATGCCCATGGTTAGGAGATCTGCTGCAACTAACCTGGGAAAATTTGCTGGGACTGTAGAAGACGTGCACCTCAAGGCTGACATAATGTCTATATTTGAGGATTTGACACAGGATGATCAGGATTCTGTTCGGTTATTGGCTGTTGAGGGTTGTGCAGCTCTTGGGAAGTTGTTGGAACCTCAAGAATGTGTGGCCCATATTCTTCCTGTCATTGTTAACTTTTCACAGGATAAGTCTTGGCGTGTTCGGTACATGGTTGCGAATCAATTATATGAGCTGTGTGAAGCTGTTGGTCCAGAAGCTACAAGGTCGGACCTGGTGCCTGCATATGTTCGGCTTCTTCGGGATAATGAGGCTGAAGTACGAATAGCTGCTGCAGGAAAAGTAACTAAGTTTTGCCGAATTTTGAATCCAGAACTTGCCATTCAGCAGATCCTTCCTTTTGTAAAGGACTTGTCAACAGATTCTTCCCAGCACGTTCGTTCTGCATTGGCATCAGTAATAATGGGAATGGCACCAGTTTTAGGAAAGGATGCAACCATAGAGCAGCTGCTGCCTATTTTTCTCTCTCTTCTAAAAGACGAGTTCCCTGATGTGCGATTGAATATTATCAGCAAGCTTGATCAAGTCAACCAGGTAATTGGGATTGATCTGCTGTCCCAGTCTTTGTTGCCGGCAATTGTTGAACTTGCAGAGGATAGACATTGGAGGGTTCGGCTTGCGATAATAGAATATATTCCTTTATTGGCAAGTCAGTTGGGTGTTGGGTTTTTTGATGATAAGCTTGGGTCTCTTTGCATGCAGTGGTTAAATGATAAGGTTTACTCAATACGTGATGCAGCTGCTAATAATGTGAAGCGCCTTGCGGAAGAATTTGGCCCTGAATGGGCAATGCAGCATATAGTCCCACAGGTTTTGGAAATGATTAGCAACCCCCACTATTTGTATCGGATGACGATTCTCCATGCAATTTCCCTACTTGCCCCTGTTTTGGGATCAGAAATCACTTGTTCCAAGCTTCTACCGGTGGTAGTCACTGCATCAAAAGATAGGGTACCAAACATCAAGTTCAATGTGGCTAAGGTGTTGCAGTCAATTATTCCGATAGTTGATCAGTCGGTGGTGGAGAAAACTATTCGTCCTTGTTTGGTTGAGCTTAGCGAGGATCCTGACGTTGATGTAAGGTCCTTTGCTAGCCAAGCCCTTCAGTCAAGTGAGCAGGTCATGATGACTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04113 ko04114 ko04151 ko04152 ko04261 ko04350 ko04390 ko04391 ko04530 ko04728 ko04730 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04113 map04114 map04151 map04152 map04261 map04350 map04390 map04391 map04530 map04728 map04730 map05142 map05160 map05165

Pfam Domains

Protein Families

HEAT HEAT_2

Protein Analysis

588

Amino Acids

65.43

Weight (kDa)

4.91

Isoelectric Point (pI)

46.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS15-like_hel	PF22956	199 - 309	6.1e-08	VPS15-like, helical domain
PPP2R1A-like_HEAT	PF22646	274 - 351	2.5e-29	PPP2R1A-like HEAT repeat
TPR_DNAAF5	PF25757	275 - 458	9.4e-06	Dynein axonemal assembly factor 5-like, TPR repeats
VPS15-like_hel	PF22956	358 - 519	3.4e-07	VPS15-like, helical domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13320 AT1G13320 AT1G13320 AT1G25490 AT3G25800 AT3G25800 AT3G25800
fragaria_vesca	FvH4_4g27700 FvH4_4g27700 FvH4_5g12331 FvH4_5g12331
malus_domestica	MD06G1214700.v1.1 MD13G1044500.v1.1 MD14G1225600.v1.1 MD16G1045400.v1.1
prunus_persica	Prupe.1G307900_v2.0.a1 Prupe.1G307900_v2.0.a1 Prupe.5G220100_v2.0.a1
pyrus_communis	pycom06g19130 pycom13g03910 pycom14g18680 pycom16g03990
rosa_chinensis	RchiOBHm_Chr4g0435561 RchiOBHm_Chr7g0185211
rosa_laevigata	RLG00000006582
rosa_multiflora	Rmu_sc0001940.1_g000038
rosa_roxburghii	Rroxscaffold_3G00269150 Rroxscaffold_5G00376790
rosa_rugosa	Rorug04G0286500 Rorug04G0286500 Rorug04G0286600 Rorug06G0466800 Rorug06G0466900
rosa_samantha	Rh4AG342000 Rh4BG350200 Rh4CG364900 Rh4DG344500 Rh7AG076000 Rh7BG071300 Rh7CG072600 Rh7DG072000
rosa_wichuraiana	Rw4G029830 Rw7G005990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1735
Acc65I	GGTACC	1 cut(s)	1579
AccB1I	GGYRCC	3 cut(s)	844, 1039, 1579
AccII	CGCG	1 cut(s)	35
AccIII	TCCGGA	1 cut(s)	90
AciI	CCGC	7 cut(s)	35, 203, 266, 317, 342, 438, 1391
AclI	AACGTT	1 cut(s)	255
AclWI	GGATC	5 cut(s)	252, 952, 1528, 1685, 1698
AcsI	RAATTY	3 cut(s)	566, 927, 1397
AcuI	CTGAAG	3 cut(s)	74, 903, 1715
AfaI	GTAC	4 cut(s)	26, 776, 888, 1581
AflIII	ACRYGT	1 cut(s)	299
AgeI	ACCGGT	1 cut(s)	1549
AgsI	TTSAA	6 cut(s)	82, 371, 934, 1129, 1211, 1597
AhdI	GACNNNNNGTC	2 cut(s)	504, 610
AjiI	CACGTC	1 cut(s)	589
AjnI	CCWGG	4 cut(s)	134, 558, 840, 1158
Alw21I	GWGCWC	2 cut(s)	118, 594
Alw26I	GTCTC	2 cut(s)	388, 1320
Alw44I	GTGCAC	2 cut(s)	114, 590
AlwI	GGATC	5 cut(s)	252, 952, 1528, 1685, 1698
AlwNI	CAGNNNCTG	1 cut(s)	1078
Ama87I	CYCGRG	2 cut(s)	119, 423
Aor13HI	TCCGGA	1 cut(s)	90
AoxI	GGCC	2 cut(s)	717, 1402
ApaLI	GTGCAC	2 cut(s)	114, 590
ApoI	RAATTY	3 cut(s)	566, 927, 1397
AsiGI	ACCGGT	1 cut(s)	1549
Asp700I	GAANNNNTTC	2 cut(s)	147, 1260
Asp718I	GGTACC	1 cut(s)	1579
AspLEI	GCGC	1 cut(s)	1386
AspS9I	GGNCC	6 cut(s)	132, 718, 818, 838, 1403, 1710
AsuNHI	GCTAGC	1 cut(s)	1718
AvaI	CYCGRG	2 cut(s)	119, 423
AvaII	GGWCC	4 cut(s)	132, 818, 838, 1710
BaeGI	GKGCMC	3 cut(s)	118, 469, 594
BamHI	GGATCC	1 cut(s)	1690
BanI	GGYRCC	3 cut(s)	844, 1039, 1579
BbsI	GAAGAC	2 cut(s)	69, 591
Bbv12I	GWGCWC	2 cut(s)	118, 594
BbvCI	CCTCAGC	1 cut(s)	158
BciT130I	CCWGG	4 cut(s)	136, 560, 842, 1160
BclI	TGATCA	3 cut(s)	640, 1147, 1636
BcoDI	GTCTC	2 cut(s)	388, 1320
BfaI	CTAG	4 cut(s)	462, 1719, 1758, 1762
BfmI	CTRYAG	2 cut(s)	579, 900
BfoI	RGCGCY	1 cut(s)	1387
BfuAI	ACCTGC	1 cut(s)	1735
BglII	AGATCT	1 cut(s)	542
BlpI	GCTNAGC	1 cut(s)	1682
Bme1390I	CCNGG	4 cut(s)	136, 560, 842, 1160
Bme18I	GGWCC	4 cut(s)	132, 818, 838, 1710
BmeRI	GACNNNNNGTC	2 cut(s)	504, 610
BmeT110I	CYCGRG	2 cut(s)	119, 423
BmgBI	CACGTC	1 cut(s)	589
BmgT120I	GGNCC	6 cut(s)	132, 718, 818, 838, 1403, 1710
BmiI	GGNNCC	5 cut(s)	702, 846, 1041, 1581, 1692
BmrFI	CCNGG	4 cut(s)	136, 560, 842, 1160
BmrI	ACTGGG	1 cut(s)	1180
BmsI	GCATC	4 cut(s)	1028, 1048, 1351, 1574
BmtI	GCTAGC	1 cut(s)	1722
BmuI	ACTGGG	1 cut(s)	1180
BpiI	GAAGAC	2 cut(s)	69, 591
Bpu10I	CCTNAGC	2 cut(s)	158, 1605
Bpu1102I	GCTNAGC	1 cut(s)	1682
BpuEI	CTTGAG	2 cut(s)	581, 690
Bsa29I	ATCGAT	1 cut(s)	45
BsaAI	YACGTR	1 cut(s)	1358
BsaI	GGTCTC	1 cut(s)	1320
BsaJI	CCNNGG	2 cut(s)	531, 559
BsaWI	WCCGGW	2 cut(s)	90, 1549
Bse118I	RCCGGY	2 cut(s)	1198, 1549
Bse1I	ACTGG	2 cut(s)	1043, 1186
Bse3DI	GCAATG	2 cut(s)	204, 1422
BseAI	TCCGGA	1 cut(s)	90
BseBI	CCWGG	4 cut(s)	136, 560, 842, 1160
BseCI	ATCGAT	1 cut(s)	45
BseDI	CCNNGG	2 cut(s)	531, 559
BseGI	GGATG	4 cut(s)	431, 643, 1063, 1482
BseMI	GCAATG	2 cut(s)	204, 1422
BseMII	CTCAG	1 cut(s)	172
BseNI	ACTGG	2 cut(s)	1043, 1186
BseSI	GKGCMC	3 cut(s)	118, 469, 594
BseYI	CCCAGC	2 cut(s)	572, 996
BsgI	GTGCAG	2 cut(s)	268, 699
Bsh1236I	CGCG	1 cut(s)	35
Bsh1285I	CGRYCG	1 cut(s)	33
BshFI	GGCC	2 cut(s)	719, 1404
BshNI	GGYRCC	3 cut(s)	844, 1039, 1579
BshTI	ACCGGT	1 cut(s)	1549
BshVI	ATCGAT	1 cut(s)	45
BsiEI	CGRYCG	1 cut(s)	33
BsiHKAI	GWGCWC	2 cut(s)	118, 594
BsiHKCI	CYCGRG	2 cut(s)	119, 423
BsiSI	CCGG	4 cut(s)	91, 405, 1199, 1550
BslFI	GGGAC	4 cut(s)	323, 589, 1168, 1415
BsmAI	GTCTC	2 cut(s)	388, 1320
BsmFI	GGGAC	4 cut(s)	323, 589, 1168, 1415
BsnI	GGCC	2 cut(s)	719, 1404
Bso31I	GGTCTC	1 cut(s)	1320
BsoBI	CYCGRG	2 cut(s)	119, 423
Bsp1286I	GDGCHC	3 cut(s)	118, 469, 594
Bsp13I	TCCGGA	1 cut(s)	90
Bsp1720I	GCTNAGC	1 cut(s)	1682
Bsp19I	CCATGG	1 cut(s)	531
BspACI	CCGC	7 cut(s)	35, 203, 266, 317, 342, 438, 1391
BspANI	GGCC	2 cut(s)	719, 1404
BspCNI	CTCAG	1 cut(s)	171
BspDI	ATCGAT	1 cut(s)	45
BspEI	TCCGGA	1 cut(s)	90
BspFNI	CGCG	1 cut(s)	35
BspHI	TCATGA	1 cut(s)	1749
BspLI	GGNNCC	5 cut(s)	702, 846, 1041, 1581, 1692
BspMAI	CTGCAG	1 cut(s)	904
BspMI	ACCTGC	1 cut(s)	1735
BspOI	GCTAGC	1 cut(s)	1722
BspPI	GGATC	5 cut(s)	252, 952, 1528, 1685, 1698
BspT107I	GGYRCC	3 cut(s)	844, 1039, 1579
BspTNI	GGTCTC	1 cut(s)	1320
BsrDI	GCAATG	2 cut(s)	204, 1422
BsrFI	RCCGGY	2 cut(s)	1198, 1549
BsrI	ACTGG	2 cut(s)	1043, 1186
BssAI	RCCGGY	2 cut(s)	1198, 1549
BssECI	CCNNGG	2 cut(s)	531, 559
BssT1I	CCWWGG	1 cut(s)	531
Bst2UI	CCWGG	4 cut(s)	136, 560, 842, 1160
Bst4CI	ACNGT	4 cut(s)	289, 506, 513, 580
Bst6I	CTCTTC	3 cut(s)	120, 201, 1101
BstAPI	GCANNNNNTGC	1 cut(s)	1078
BstBAI	YACGTR	1 cut(s)	1358
BstC8I	GCNNGC	8 cut(s)	195, 344, 849, 1142, 1200, 1245, 1325, 1720
BstDEI	CTNAG	4 cut(s)	158, 915, 1605, 1682
BstDSI	CCRYGG	1 cut(s)	531
BstF5I	GGATG	4 cut(s)	431, 643, 1063, 1482
BstFNI	CGCG	1 cut(s)	35
BstH2I	RGCGCY	1 cut(s)	1387
BstHHI	GCGC	1 cut(s)	1386
BstMAI	GTCTC	2 cut(s)	388, 1320
BstMCI	CGRYCG	1 cut(s)	33
BstMWI	GCNNNNNNNGC	2 cut(s)	1078, 1724
BstNI	CCWGG	4 cut(s)	136, 560, 842, 1160
BstNSI	RCATGY	3 cut(s)	303, 529, 1327
BstSCI	CCNGG	4 cut(s)	134, 558, 840, 1158
BstSFI	CTRYAG	2 cut(s)	579, 900
BstSLI	GKGCMC	3 cut(s)	118, 469, 594
BstUI	CGCG	1 cut(s)	35
BstV2I	GAAGAC	2 cut(s)	69, 591
BstX2I	RGATCY	3 cut(s)	542, 957, 1690
BstXI	CCANNNNNNTGG	1 cut(s)	1166
BstYI	RGATCY	3 cut(s)	542, 957, 1690
Bsu15I	ATCGAT	1 cut(s)	45
BsuRI	GGCC	2 cut(s)	719, 1404
BsuTUI	ATCGAT	1 cut(s)	45
BtgI	CCRYGG	1 cut(s)	531
BtrI	CACGTC	1 cut(s)	589
BtsCI	GGATG	4 cut(s)	431, 643, 1063, 1482
BtsI	GCAGTG	2 cut(s)	1334, 1560
BtsIMutI	CAGTG	2 cut(s)	1334, 1560
BveI	ACCTGC	1 cut(s)	1735
Cac8I	GCNNGC	8 cut(s)	195, 344, 849, 1142, 1200, 1245, 1325, 1720
CaiI	CAGNNNCTG	1 cut(s)	1078
CciI	TCATGA	1 cut(s)	1749
CfoI	GCGC	1 cut(s)	1386
Cfr10I	RCCGGY	2 cut(s)	1198, 1549
Cfr13I	GGNCC	6 cut(s)	132, 718, 818, 838, 1403, 1710
ClaI	ATCGAT	1 cut(s)	45
CsiI	ACCWGGT	2 cut(s)	840, 1158
Csp6I	GTAC	4 cut(s)	25, 775, 887, 1580
CspAI	ACCGGT	1 cut(s)	1549
CspCI	CAANNNNNGTGG	2 cut(s)	1422, 1457
CviAII	CATG	8 cut(s)	248, 300, 526, 532, 778, 1324, 1490, 1750
CviQI	GTAC	4 cut(s)	25, 775, 887, 1580
DdeI	CTNAG	4 cut(s)	158, 915, 1605, 1682
DraI	TTTAAA	1 cut(s)	480
DriI	GACNNNNNGTC	2 cut(s)	504, 610
Eam1104I	CTCTTC	3 cut(s)	120, 201, 1101
Eam1105I	GACNNNNNGTC	2 cut(s)	504, 610
EarI	CTCTTC	3 cut(s)	120, 201, 1101
EciI	GGCGGA	1 cut(s)	218
Eco130I	CCWWGG	1 cut(s)	531
Eco31I	GGTCTC	1 cut(s)	1320
Eco47I	GGWCC	4 cut(s)	132, 818, 838, 1710
Eco57I	CTGAAG	3 cut(s)	74, 903, 1715
Eco88I	CYCGRG	2 cut(s)	119, 423
EcoO109I	RGGNCCY	1 cut(s)	1710
EcoRII	CCWGG	4 cut(s)	134, 558, 840, 1158
EcoT14I	CCWWGG	1 cut(s)	531
ErhI	CCWWGG	1 cut(s)	531
FaeI	CATG	8 cut(s)	251, 303, 529, 535, 781, 1327, 1493, 1753
FaqI	GGGAC	4 cut(s)	323, 589, 1168, 1415
FatI	CATG	8 cut(s)	247, 299, 525, 531, 777, 1323, 1489, 1749
FauI	CCCGC	2 cut(s)	273, 335
FauNDI	CATATG	1 cut(s)	853
FbaI	TGATCA	3 cut(s)	640, 1147, 1636
FokI	GGATG	4 cut(s)	418, 650, 1070, 1489
FspBI	CTAG	4 cut(s)	462, 1719, 1758, 1762
GlaI	GCGC	1 cut(s)	1385
GsaI	CCCAGC	2 cut(s)	576, 1000
HaeII	RGCGCY	1 cut(s)	1387
HaeIII	GGCC	2 cut(s)	719, 1404
HapII	CCGG	4 cut(s)	91, 405, 1199, 1550
HhaI	GCGC	1 cut(s)	1386
Hin1II	CATG	8 cut(s)	251, 303, 529, 535, 781, 1327, 1493, 1753
Hin6I	GCGC	1 cut(s)	1384
HinP1I	GCGC	1 cut(s)	1384
HincII	GTYRAC	4 cut(s)	509, 742, 984, 1156
HindII	GTYRAC	4 cut(s)	509, 742, 984, 1156
HindIII	AAGCTT	3 cut(s)	1142, 1307, 1541
HinfI	GANTC	7 cut(s)	148, 323, 647, 787, 934, 989, 1483
HpaI	GTTAAC	1 cut(s)	742
HpaII	CCGG	4 cut(s)	91, 405, 1199, 1550
Hpy166II	GTNNAC	8 cut(s)	116, 417, 509, 592, 742, 984, 1156, 1348
Hpy188I	TCNGA	4 cut(s)	838, 1476, 1525, 1629
Hpy188III	TCNNGA	8 cut(s)	91, 644, 707, 821, 869, 938, 1694, 1750
Hpy8I	GTNNAC	8 cut(s)	116, 417, 509, 592, 742, 984, 1156, 1348
HpyAV	CCTTC	3 cut(s)	133, 971, 1739
HpyCH4III	ACNGT	4 cut(s)	289, 506, 513, 580
HpyCH4IV	ACGT	5 cut(s)	255, 588, 1002, 1357, 1698
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1078, 1724
HpyF3I	CTNAG	4 cut(s)	158, 915, 1605, 1682
HpySE526I	ACGT	5 cut(s)	255, 588, 1002, 1357, 1698
Hsp92II	CATG	8 cut(s)	251, 303, 529, 535, 781, 1327, 1493, 1753
HspAI	GCGC	1 cut(s)	1384
Kpn2I	TCCGGA	1 cut(s)	90
KpnI	GGTACC	1 cut(s)	1583
KroI	GCCGGC	1 cut(s)	1198
KroNI	GCCGGC	1 cut(s)	1200
Ksp22I	TGATCA	3 cut(s)	640, 1147, 1636
KspAI	GTTAAC	1 cut(s)	742
LmnI	GCTCC	2 cut(s)	78, 267
LweI	GCATC	4 cut(s)	1028, 1048, 1351, 1574
MabI	ACCWGGT	2 cut(s)	840, 1158
MaeI	CTAG	4 cut(s)	462, 1719, 1758, 1762
MaeII	ACGT	5 cut(s)	255, 588, 1002, 1357, 1698
MaeIII	GTNAC	2 cut(s)	910, 1558
MfeI	CAATTG	1 cut(s)	1203
MflI	RGATCY	3 cut(s)	542, 957, 1690
MhlI	GDGCHC	3 cut(s)	118, 469, 594
MluCI	AATT	9 cut(s)	336, 566, 791, 927, 1164, 1203, 1397, 1494, 1620
MmeI	TCCRAC	2 cut(s)	678, 816
MroI	TCCGGA	1 cut(s)	90
MroNI	GCCGGC	1 cut(s)	1198
MroXI	GAANNNNTTC	2 cut(s)	147, 1260
MseI	TTAA	6 cut(s)	41, 69, 390, 479, 741, 1334
MslI	CAYNNNNRTG	1 cut(s)	530
MspA1I	CMGCKG	2 cut(s)	1075, 1367
MspI	CCGG	4 cut(s)	91, 405, 1199, 1550
MspR9I	CCNGG	4 cut(s)	136, 560, 842, 1160
MunI	CAATTG	1 cut(s)	1203
MvaI	CCWGG	4 cut(s)	136, 560, 842, 1160
MvnI	CGCG	1 cut(s)	35
MwoI	GCNNNNNNNGC	2 cut(s)	1078, 1724
NaeI	GCCGGC	1 cut(s)	1200
NcoI	CCATGG	1 cut(s)	531
NdeI	CATATG	1 cut(s)	853
NgoMIV	GCCGGC	1 cut(s)	1198
NheI	GCTAGC	1 cut(s)	1718
NlaIII	CATG	8 cut(s)	251, 303, 529, 535, 781, 1327, 1493, 1753
NlaIV	GGNNCC	5 cut(s)	702, 846, 1041, 1581, 1692
NmuCI	GTSAC	1 cut(s)	1558
NspI	RCATGY	3 cut(s)	303, 529, 1327
PaeI	GCATGC	1 cut(s)	1327
PagI	TCATGA	1 cut(s)	1749
PciI	ACATGT	1 cut(s)	299
PdiI	GCCGGC	1 cut(s)	1200
PdmI	GAANNNNTTC	2 cut(s)	147, 1260
PfeI	GAWTC	7 cut(s)	148, 323, 647, 787, 934, 989, 1483
PinAI	ACCGGT	1 cut(s)	1549
Ple19I	CGATCG	1 cut(s)	33
Ppu21I	YACGTR	1 cut(s)	1358
PpuMI	RGGWCCY	1 cut(s)	1710
PscI	ACATGT	1 cut(s)	299
Psp1406I	AACGTT	1 cut(s)	255
Psp5II	RGGWCCY	1 cut(s)	1710
Psp6I	CCWGG	4 cut(s)	134, 558, 840, 1158
PspFI	CCCAGC	2 cut(s)	572, 996
PspGI	CCWGG	4 cut(s)	134, 558, 840, 1158
PspN4I	GGNNCC	5 cut(s)	702, 846, 1041, 1581, 1692
PspPI	GGNCC	6 cut(s)	132, 718, 818, 838, 1403, 1710
PspPPI	RGGWCCY	1 cut(s)	1710
PstI	CTGCAG	1 cut(s)	904
PstNI	CAGNNNCTG	1 cut(s)	1078
PsuI	RGATCY	3 cut(s)	542, 957, 1690
PvuI	CGATCG	1 cut(s)	33
PvuII	CAGCTG	2 cut(s)	1075, 1367
RsaI	GTAC	4 cut(s)	26, 776, 888, 1581
RsaNI	GTAC	4 cut(s)	25, 775, 887, 1580
RseI	CAYNNNNRTG	1 cut(s)	530
SaqAI	TTAA	6 cut(s)	41, 69, 390, 479, 741, 1334
Sau96I	GGNCC	6 cut(s)	132, 718, 818, 838, 1403, 1710
ScrFI	CCNGG	4 cut(s)	136, 560, 842, 1160
SduI	GDGCHC	3 cut(s)	118, 469, 594
SexAI	ACCWGGT	2 cut(s)	840, 1158
SfaNI	GCATC	4 cut(s)	1028, 1048, 1351, 1574
SfcI	CTRYAG	2 cut(s)	579, 900
SinI	GGWCC	4 cut(s)	132, 818, 838, 1710
SmiMI	CAYNNNNRTG	1 cut(s)	530
SmlI	CTYRAG	2 cut(s)	596, 705
SmoI	CTYRAG	2 cut(s)	596, 705
SphI	GCATGC	1 cut(s)	1327
Sse9I	AATT	9 cut(s)	336, 566, 791, 927, 1164, 1203, 1397, 1494, 1620
SsiI	CCGC	7 cut(s)	35, 203, 266, 317, 342, 438, 1391
SspI	AATATT	2 cut(s)	374, 1132
SspMI	CTAG	4 cut(s)	462, 1719, 1758, 1762
StyD4I	CCNGG	4 cut(s)	134, 558, 840, 1158
StyI	CCWWGG	1 cut(s)	531
TaaI	ACNGT	4 cut(s)	289, 506, 513, 580
TaiI	ACGT	5 cut(s)	258, 591, 1005, 1360, 1701
TaqI	TCGA	1 cut(s)	45
TasI	AATT	9 cut(s)	336, 566, 791, 927, 1164, 1203, 1397, 1494, 1620
TfiI	GAWTC	7 cut(s)	148, 323, 647, 787, 934, 989, 1483
Tru1I	TTAA	6 cut(s)	41, 69, 390, 479, 741, 1334
Tru9I	TTAA	6 cut(s)	41, 69, 390, 479, 741, 1334
TscAI	CASTG	2 cut(s)	1334, 1567
TseFI	GTSAC	1 cut(s)	1558
Tsp45I	GTSAC	1 cut(s)	1558
TspDTI	ATGAA	5 cut(s)	30, 198, 367, 420, 437
TspGWI	ACGGA	3 cut(s)	65, 500, 508
TspRI	CASTG	2 cut(s)	1334, 1567
VneI	GTGCAC	2 cut(s)	114, 590
VpaK11BI	GGWCC	4 cut(s)	132, 818, 838, 1710
XapI	RAATTY	3 cut(s)	566, 927, 1397
XceI	RCATGY	3 cut(s)	303, 529, 1327
XmnI	GAANNNNTTC	2 cut(s)	147, 1260
XspI	CTAG	4 cut(s)	462, 1719, 1758, 1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.