Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0002203

Physical Location & Seq

Genomic Coordinates Forward (+)

56507059 .. 56513123

Gene Structure 6065 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G029830.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGTCTATGGTTGATGAACCGCTATATCCGATAGCCGTTCTCATAGACGAGCTGAAAAATGACGACATCCAGTTACGGCTGAACTCAATCCGCAGGCTATCAACAATTGCCCGTGCTCTTGGGGAAGATCGAACGCGGAAGGAGTTGATCCCATTTCTGAGCGAAAACAATGATGATGATGATGAGGTACTTCTTGCAATGGCAGAAGAGTTGGGGGTCTTCATTCCATATGTTGGGGGTGTGGAACATGCACATGTTTTGCTCCCACCCTTGGAAACCCTTTGCACTGTTGAGGAGACCTGCGTGAGGGACAAGGCTGTGGAGTCATTATGTAGGATTGGGTCTCAGATGAGGGAGGGTGATTTAGTCAGCTGGTTTATTCCTCTTGTGAAGAGGTTGGCGGCTGGTGAGTGGTTTACAGCCCGAGTCTCTGCATGTGGGCTTTTTCATATAGCCTACCCAAGCGCATCAGAGACATTAAAGACAGAGCTCCGGTCGATATACAGTCAGTTGTGTCAAGATGACATGCCTATGGTTAGGAGGTCTGCTGCAACGAATCTGGGGAAATTTGCAGCAACTGTCGAACCAGCTCATCTGAAGACTGATATCATGTCTATATTTGAGGATCTTACACAAGATGATCAAGATTCTGTTCGACTATTGGCTGTTGAAGGCTGTGCTGCTCTTGGCAAGTTATTGGACCCCCAAGATTGTGTTCAGCATATCCTCCCTGTTATTGTCAACTTCTCGCAGGACAAATCTTGGCGTGTGCGATATATGGTCGCAAATCAACTATATGAGCTTTGTGAAGCTGTGGGGCCTGACCCTACAAGAACGGACTTGGTTCCAGCATACGTGCGATTGCTTCGAGATAATGAGGCTGAAGTACGTATAGCAGCTGCTGGAAAAGTTACTAAGTTTTGTCGGATTTTAAATCCCGAACTTGCCATTCAGCATATTCTTCCCTGTGTGAAGGAACTGTCATCAGATTCTTCCCAACATGTCCGATCTGCTTTGGCTTCAGTTATCATGGGAATGGCTCTTGTATTAGGAAAGGATGCTACAATTGAGCAGCTTCTTCCCATTTTTCTTTCACTTCTGAAGGATGAATTTCCTGATGTGCGCCTCAATATCATTAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATCGATTTGCTATCTCAATCCTTGTTACCAGCCATAGTTGAGCTCGCGGAGGATAGACATTGGAGGGTTCGACTTGCAATTATAGAGTACATACCTTTGTTGGCAAGTCAGCTGGGTGTAGGGTTCTTTGATGATAAGCTCGGTTCCCTTTGCATGCAGTGGTTGCAGGATAAGGTTTACTCGATTCGTGATGCTGCTGCTAATAATTTGAAGCGCCTTGCTGAAGAATTTGGTCCAGAATGGGCAATGCAGCACATTGTTCCACAGGTTCTGGAGATGATTGACAATCCCCACTATTTATATCGAATGACAATTCTGCGTGCAATCTGCCTCCTTGCCCCCGTTATGGGTTCAGAAATCACATGTTCAAAACTGCTGCCAGTGGTTGTCACTGCATCAAAGGACAGAGTACCCAACATTAAGTTCAATGTGGCAAAGGTGCTGCAGTCCCTTATCCCCATAGTTGATCATTCGGTGGTGGAGAAGACAATTCGTCCCACTTTGGTTGAGCTCAGTGAGGATCCAGATGTTGATGTCCGATTTTTTGCTACCCAGGCACTTCAAGCAATTGATCATGTTATGATGTCAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0008150 GO:0010035 GO:0010038 GO:0016020 GO:0019220 GO:0019222 GO:0031323 GO:0042221 GO:0042325 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050789 GO:0050794 GO:0050896 GO:0051174 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04113 ko04114 ko04151 ko04152 ko04261 ko04350 ko04390 ko04391 ko04530 ko04728 ko04730 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04113 map04114 map04151 map04152 map04261 map04350 map04390 map04391 map04530 map04728 map04730 map05142 map05160 map05165

Pfam Domains

Protein Families

HEAT HEAT_2

Protein Analysis

587

Amino Acids

65.62

Weight (kDa)

4.99

Isoelectric Point (pI)

44.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS15-like_hel	PF22956	197 - 309	9.8e-08	VPS15-like, helical domain
PPP2R1A-like_HEAT	PF22646	277 - 351	9.8e-29	PPP2R1A-like HEAT repeat
TPR_DNAAF5	PF25757	281 - 456	8.7e-06	Dynein axonemal assembly factor 5-like, TPR repeats
VPS15-like_hel	PF22956	358 - 519	1e-06	VPS15-like, helical domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13320 AT1G13320 AT1G13320 AT1G25490 AT3G25800 AT3G25800 AT3G25800
fragaria_vesca	FvH4_4g27700 FvH4_4g27700 FvH4_5g12331 FvH4_5g12331
malus_domestica	MD06G1214700.v1.1 MD13G1044500.v1.1 MD14G1225600.v1.1 MD16G1045400.v1.1
prunus_persica	Prupe.1G307900_v2.0.a1 Prupe.1G307900_v2.0.a1 Prupe.5G220100_v2.0.a1
pyrus_communis	pycom06g19130 pycom13g03910 pycom14g18680 pycom16g03990
rosa_chinensis	RchiOBHm_Chr4g0435561 RchiOBHm_Chr7g0185211
rosa_laevigata	RLG00000006582
rosa_multiflora	Rmu_sc0001940.1_g000038
rosa_roxburghii	Rroxscaffold_3G00269150 Rroxscaffold_5G00376790
rosa_rugosa	Rorug04G0286500 Rorug04G0286500 Rorug04G0286600 Rorug06G0466800 Rorug06G0466900
rosa_samantha	Rh4AG342000 Rh4BG350200 Rh4CG364900 Rh4DG344500 Rh7AG076000 Rh7BG071300 Rh7CG072600 Rh7DG072000
rosa_wichuraiana	Rw4G029830 Rw7G005990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	308
AccB7I	CCANNNNNTGG	1 cut(s)	233
AccII	CGCG	2 cut(s)	136, 1217
AciI	CCGC	5 cut(s)	20, 91, 136, 401, 1217
AclWI	GGATC	4 cut(s)	142, 633, 1685, 1698
AcsI	RAATTY	3 cut(s)	566, 1109, 1397
AcuI	CTGAAG	5 cut(s)	617, 903, 1005, 1121, 1413
AfaI	GTAC	4 cut(s)	189, 888, 1259, 1581
AfiI	CCNNNNNNNGG	5 cut(s)	233, 271, 306, 1516, 1517
AflIII	ACRYGT	3 cut(s)	253, 1000, 1532
AgsI	TTSAA	5 cut(s)	671, 1381, 1539, 1597, 1733
AhdI	GACNNNNNGTC	1 cut(s)	1662
AjnI	CCWGG	1 cut(s)	1722
AjuI	GAANNNNNNNTTGG	4 cut(s)	699, 731, 1577, 1609
Alw21I	GWGCWC	4 cut(s)	118, 492, 1215, 1683
Alw26I	GTCTC	4 cut(s)	290, 348, 433, 467
AlwI	GGATC	4 cut(s)	142, 633, 1685, 1698
AlwNI	CAGNNNCTG	3 cut(s)	578, 902, 1441
Ama87I	CYCGRG	1 cut(s)	423
AoxI	GGCC	1 cut(s)	818
ApoI	RAATTY	3 cut(s)	566, 1109, 1397
AspLEI	GCGC	3 cut(s)	467, 1125, 1386
AspS9I	GGNCC	3 cut(s)	700, 818, 1403
AsuHPI	GGTGA	2 cut(s)	371, 419
AvaI	CYCGRG	1 cut(s)	423
AvaII	GGWCC	2 cut(s)	700, 1403
BamHI	GGATCC	1 cut(s)	1690
BanII	GRGCYC	3 cut(s)	492, 1215, 1683
BbsI	GAAGAC	3 cut(s)	211, 605, 1661
Bbv12I	GWGCWC	4 cut(s)	118, 492, 1215, 1683
BceAI	ACGGC	2 cut(s)	20, 92
BciT130I	CCWGG	1 cut(s)	1724
BclI	TGATCA	4 cut(s)	640, 1147, 1636, 1741
BcoDI	GTCTC	4 cut(s)	290, 348, 433, 467
BfaI	CTAG	1 cut(s)	1762
BfmI	CTRYAG	1 cut(s)	1613
BfoI	RGCGCY	1 cut(s)	1387
BfuAI	ACCTGC	1 cut(s)	308
Bme1390I	CCNGG	1 cut(s)	1724
Bme18I	GGWCC	2 cut(s)	700, 1403
BmeRI	GACNNNNNGTC	1 cut(s)	1662
BmeT110I	CYCGRG	1 cut(s)	423
BmgT120I	GGNCC	3 cut(s)	700, 818, 1403
BmiI	GGNNCC	5 cut(s)	702, 819, 846, 1315, 1692
BmrFI	CCNGG	1 cut(s)	1724
BmsI	GCATC	4 cut(s)	476, 1048, 1351, 1574
BpiI	GAAGAC	3 cut(s)	211, 605, 1661
BpmI	CTGGAG	1 cut(s)	1463
Bsa29I	ATCGAT	1 cut(s)	1173
BsaAI	YACGTR	2 cut(s)	856, 890
BsaI	GGTCTC	2 cut(s)	290, 348
BsaJI	CCNNGG	2 cut(s)	270, 1722
BsaWI	WCCGGW	1 cut(s)	492
Bsc4I	CCNNNNNNNGG	5 cut(s)	233, 271, 306, 1516, 1517
Bse1I	ACTGG	2 cut(s)	70, 1550
Bse3DI	GCAATG	2 cut(s)	204, 1422
BseBI	CCWGG	1 cut(s)	1724
BseCI	ATCGAT	1 cut(s)	1173
BseDI	CCNNGG	2 cut(s)	270, 1722
BseGI	GGATG	3 cut(s)	66, 1063, 1111
BseLI	CCNNNNNNNGG	5 cut(s)	233, 271, 306, 1516, 1517
BseMI	GCAATG	2 cut(s)	204, 1422
BseMII	CTCAG	3 cut(s)	149, 359, 1696
BseNI	ACTGG	2 cut(s)	70, 1550
BseRI	GAGGAG	1 cut(s)	308
BseYI	CCCAGC	1 cut(s)	1282
Bsh1236I	CGCG	2 cut(s)	136, 1217
Bsh1285I	CGRYCG	1 cut(s)	497
BshFI	GGCC	1 cut(s)	820
BshVI	ATCGAT	1 cut(s)	1173
BsiEI	CGRYCG	1 cut(s)	497
BsiHKAI	GWGCWC	4 cut(s)	118, 492, 1215, 1683
BsiHKCI	CYCGRG	1 cut(s)	423
BsiSI	CCGG	1 cut(s)	493
BslFI	GGGAC	3 cut(s)	323, 1603, 1650
BslI	CCNNNNNNNGG	5 cut(s)	233, 271, 306, 1516, 1517
BsmAI	GTCTC	4 cut(s)	290, 348, 433, 467
BsmFI	GGGAC	3 cut(s)	323, 1603, 1650
BsnI	GGCC	1 cut(s)	820
Bso31I	GGTCTC	2 cut(s)	290, 348
BsoBI	CYCGRG	1 cut(s)	423
Bsp1286I	GDGCHC	4 cut(s)	118, 492, 1215, 1683
Bsp143I	GATC	9 cut(s)	127, 147, 625, 640, 1007, 1147, 1636, 1690, 1741
BspACI	CCGC	5 cut(s)	20, 91, 136, 401, 1217
BspANI	GGCC	1 cut(s)	820
BspCNI	CTCAG	3 cut(s)	150, 358, 1695
BspDI	ATCGAT	1 cut(s)	1173
BspFNI	CGCG	2 cut(s)	136, 1217
BspLI	GGNNCC	5 cut(s)	702, 819, 846, 1315, 1692
BspMAI	CTGCAG	1 cut(s)	1617
BspMI	ACCTGC	1 cut(s)	308
BspPI	GGATC	4 cut(s)	142, 633, 1685, 1698
BspTNI	GGTCTC	2 cut(s)	290, 348
BsrDI	GCAATG	2 cut(s)	204, 1422
BsrI	ACTGG	2 cut(s)	70, 1550
BssECI	CCNNGG	2 cut(s)	270, 1722
BssMI	GATC	9 cut(s)	127, 147, 625, 640, 1007, 1147, 1636, 1690, 1741
BssT1I	CCWWGG	1 cut(s)	270
Bst2UI	CCWGG	1 cut(s)	1724
Bst4CI	ACNGT	4 cut(s)	289, 506, 580, 981
Bst6I	CTCTTC	2 cut(s)	201, 386
BstAPI	GCANNNNNTGC	1 cut(s)	1333
BstBAI	YACGTR	2 cut(s)	856, 890
BstC8I	GCNNGC	5 cut(s)	95, 1142, 1215, 1325, 1491
BstDEI	CTNAG	4 cut(s)	158, 345, 915, 1682
BstENI	CCTNNNNNAGG	1 cut(s)	304
BstF5I	GGATG	3 cut(s)	66, 1063, 1111
BstFNI	CGCG	2 cut(s)	136, 1217
BstH2I	RGCGCY	1 cut(s)	1387
BstHHI	GCGC	3 cut(s)	467, 1125, 1386
BstKTI	GATC	9 cut(s)	130, 150, 628, 643, 1010, 1150, 1639, 1693, 1744
BstMAI	GTCTC	4 cut(s)	290, 348, 433, 467
BstMBI	GATC	9 cut(s)	127, 147, 625, 640, 1007, 1147, 1636, 1690, 1741
BstMCI	CGRYCG	1 cut(s)	497
BstMWI	GCNNNNNNNGC	3 cut(s)	1333, 1724, 1733
BstNI	CCWGG	1 cut(s)	1724
BstNSI	RCATGY	7 cut(s)	251, 257, 438, 529, 1004, 1327, 1536
BstSCI	CCNGG	1 cut(s)	1722
BstSFI	CTRYAG	1 cut(s)	1613
BstSNI	TACGTA	1 cut(s)	890
BstUI	CGCG	2 cut(s)	136, 1217
BstV2I	GAAGAC	3 cut(s)	211, 605, 1661
BstX2I	RGATCY	2 cut(s)	625, 1690
BstYI	RGATCY	2 cut(s)	625, 1690
Bsu15I	ATCGAT	1 cut(s)	1173
BsuRI	GGCC	1 cut(s)	820
BsuTUI	ATCGAT	1 cut(s)	1173
BtsCI	GGATG	3 cut(s)	66, 1063, 1111
BtsI	GCAGTG	2 cut(s)	1334, 1560
BtsIMutI	CAGTG	5 cut(s)	285, 1334, 1557, 1560, 1690
BveI	ACCTGC	1 cut(s)	308
Cac8I	GCNNGC	5 cut(s)	95, 1142, 1215, 1325, 1491
CaiI	CAGNNNCTG	3 cut(s)	578, 902, 1441
CfoI	GCGC	3 cut(s)	467, 1125, 1386
Cfr13I	GGNCC	3 cut(s)	700, 818, 1403
ClaI	ATCGAT	1 cut(s)	1173
Csp6I	GTAC	4 cut(s)	188, 887, 1258, 1580
CspCI	CAANNNNNGTGG	2 cut(s)	1657, 1692
CviQI	GTAC	4 cut(s)	188, 887, 1258, 1580
DdeI	CTNAG	4 cut(s)	158, 345, 915, 1682
DpnI	GATC	9 cut(s)	129, 149, 627, 642, 1009, 1149, 1638, 1692, 1743
DpnII	GATC	9 cut(s)	127, 147, 625, 640, 1007, 1147, 1636, 1690, 1741
DraI	TTTAAA	1 cut(s)	933
DriI	GACNNNNNGTC	1 cut(s)	1662
Eam1104I	CTCTTC	2 cut(s)	201, 386
Eam1105I	GACNNNNNGTC	1 cut(s)	1662
EarI	CTCTTC	2 cut(s)	201, 386
Ecl136II	GAGCTC	3 cut(s)	490, 1213, 1681
Eco105I	TACGTA	1 cut(s)	890
Eco130I	CCWWGG	1 cut(s)	270
Eco24I	GRGCYC	3 cut(s)	492, 1215, 1683
Eco31I	GGTCTC	2 cut(s)	290, 348
Eco32I	GATATC	1 cut(s)	607
Eco47I	GGWCC	2 cut(s)	700, 1403
Eco53kI	GAGCTC	3 cut(s)	490, 1213, 1681
Eco57I	CTGAAG	5 cut(s)	617, 903, 1005, 1121, 1413
Eco88I	CYCGRG	1 cut(s)	423
EcoICRI	GAGCTC	3 cut(s)	490, 1213, 1681
EcoNI	CCTNNNNNAGG	1 cut(s)	304
EcoO109I	RGGNCCY	1 cut(s)	818
EcoRII	CCWGG	1 cut(s)	1722
EcoRV	GATATC	1 cut(s)	607
EcoT14I	CCWWGG	1 cut(s)	270
EcoT38I	GRGCYC	3 cut(s)	492, 1215, 1683
ErhI	CCWWGG	1 cut(s)	270
FaqI	GGGAC	3 cut(s)	323, 1603, 1650
FauNDI	CATATG	1 cut(s)	229
FbaI	TGATCA	4 cut(s)	640, 1147, 1636, 1741
FokI	GGATG	3 cut(s)	53, 1070, 1118
FriOI	GRGCYC	3 cut(s)	492, 1215, 1683
FspBI	CTAG	1 cut(s)	1762
GlaI	GCGC	3 cut(s)	466, 1124, 1385
GsaI	CCCAGC	1 cut(s)	1286
GsuI	CTGGAG	1 cut(s)	1463
HaeII	RGCGCY	1 cut(s)	1387
HaeIII	GGCC	1 cut(s)	820
HapII	CCGG	1 cut(s)	493
HhaI	GCGC	3 cut(s)	467, 1125, 1386
Hin6I	GCGC	3 cut(s)	465, 1123, 1384
HinP1I	GCGC	3 cut(s)	465, 1123, 1384
HincII	GTYRAC	1 cut(s)	742
HindII	GTYRAC	1 cut(s)	742
HindIII	AAGCTT	1 cut(s)	1142
HinfI	GANTC	8 cut(s)	323, 426, 556, 647, 989, 1156, 1170, 1354
HpaII	CCGG	1 cut(s)	493
HphI	GGTGA	2 cut(s)	371, 419
Hpy166II	GTNNAC	3 cut(s)	417, 742, 1348
Hpy188III	TCNNGA	9 cut(s)	518, 644, 869, 938, 1115, 1358, 1406, 1442, 1694
Hpy8I	GTNNAC	3 cut(s)	417, 742, 1348
HpyAV	CCTTC	4 cut(s)	133, 665, 967, 1096
HpyCH4III	ACNGT	4 cut(s)	289, 506, 580, 981
HpyCH4IV	ACGT	2 cut(s)	855, 889
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1333, 1724, 1733
HpyF3I	CTNAG	4 cut(s)	158, 345, 915, 1682
HpySE526I	ACGT	2 cut(s)	855, 889
HspAI	GCGC	3 cut(s)	465, 1123, 1384
Ksp22I	TGATCA	4 cut(s)	640, 1147, 1636, 1741
Kzo9I	GATC	9 cut(s)	127, 147, 625, 640, 1007, 1147, 1636, 1690, 1741
LmnI	GCTCC	2 cut(s)	267, 495
LweI	GCATC	4 cut(s)	476, 1048, 1351, 1574
MaeI	CTAG	1 cut(s)	1762
MaeII	ACGT	2 cut(s)	855, 889
MaeIII	GTNAC	4 cut(s)	72, 910, 1194, 1558
MalI	GATC	9 cut(s)	129, 149, 627, 642, 1009, 1149, 1638, 1692, 1743
MboI	GATC	9 cut(s)	127, 147, 625, 640, 1007, 1147, 1636, 1690, 1741
MfeI	CAATTG	3 cut(s)	105, 1065, 1737
MflI	RGATCY	2 cut(s)	625, 1690
MhlI	GDGCHC	4 cut(s)	118, 492, 1215, 1683
MlyI	GAGTC	2 cut(s)	332, 435
MmeI	TCCRAC	1 cut(s)	905
MseI	TTAA	3 cut(s)	479, 932, 1590
MslI	CAYNNNNRTG	3 cut(s)	252, 530, 1034
MspA1I	CMGCKG	3 cut(s)	372, 899, 1282
MspI	CCGG	1 cut(s)	493
MspR9I	CCNGG	1 cut(s)	1724
MunI	CAATTG	3 cut(s)	105, 1065, 1737
MvaI	CCWGG	1 cut(s)	1724
MvnI	CGCG	2 cut(s)	136, 1217
MwoI	GCNNNNNNNGC	3 cut(s)	1333, 1724, 1733
NdeI	CATATG	1 cut(s)	229
NdeII	GATC	9 cut(s)	127, 147, 625, 640, 1007, 1147, 1636, 1690, 1741
NlaIV	GGNNCC	5 cut(s)	702, 819, 846, 1315, 1692
NmuCI	GTSAC	1 cut(s)	1558
NspI	RCATGY	7 cut(s)	251, 257, 438, 529, 1004, 1327, 1536
PaeI	GCATGC	1 cut(s)	1327
PciI	ACATGT	3 cut(s)	253, 1000, 1532
PfeI	GAWTC	6 cut(s)	556, 647, 989, 1156, 1170, 1354
PflMI	CCANNNNNTGG	1 cut(s)	233
PleI	GAGTC	2 cut(s)	331, 434
PpsI	GAGTC	2 cut(s)	331, 434
Ppu21I	YACGTR	2 cut(s)	856, 890
PscI	ACATGT	3 cut(s)	253, 1000, 1532
Psp124BI	GAGCTC	3 cut(s)	492, 1215, 1683
Psp6I	CCWGG	1 cut(s)	1722
PspFI	CCCAGC	1 cut(s)	1282
PspGI	CCWGG	1 cut(s)	1722
PspN4I	GGNNCC	5 cut(s)	702, 819, 846, 1315, 1692
PspPI	GGNCC	3 cut(s)	700, 818, 1403
PstI	CTGCAG	1 cut(s)	1617
PstNI	CAGNNNCTG	3 cut(s)	578, 902, 1441
PsuI	RGATCY	2 cut(s)	625, 1690
PvuII	CAGCTG	3 cut(s)	372, 899, 1282
RsaI	GTAC	4 cut(s)	189, 888, 1259, 1581
RsaNI	GTAC	4 cut(s)	188, 887, 1258, 1580
RseI	CAYNNNNRTG	3 cut(s)	252, 530, 1034
SacI	GAGCTC	3 cut(s)	492, 1215, 1683
SaqAI	TTAA	3 cut(s)	479, 932, 1590
Sau3AI	GATC	9 cut(s)	127, 147, 625, 640, 1007, 1147, 1636, 1690, 1741
Sau96I	GGNCC	3 cut(s)	700, 818, 1403
SchI	GAGTC	2 cut(s)	332, 435
ScrFI	CCNGG	1 cut(s)	1724
SduI	GDGCHC	4 cut(s)	118, 492, 1215, 1683
SfaNI	GCATC	4 cut(s)	476, 1048, 1351, 1574
SfcI	CTRYAG	1 cut(s)	1613
SinI	GGWCC	2 cut(s)	700, 1403
SmiMI	CAYNNNNRTG	3 cut(s)	252, 530, 1034
SnaBI	TACGTA	1 cut(s)	890
SphI	GCATGC	1 cut(s)	1327
SsiI	CCGC	5 cut(s)	20, 91, 136, 401, 1217
SspMI	CTAG	1 cut(s)	1762
SstI	GAGCTC	3 cut(s)	492, 1215, 1683
StyD4I	CCNGG	1 cut(s)	1722
StyI	CCWWGG	1 cut(s)	270
TaaI	ACNGT	4 cut(s)	289, 506, 580, 981
TaiI	ACGT	2 cut(s)	858, 892
TaqI	TCGA	9 cut(s)	130, 497, 582, 655, 868, 1173, 1240, 1352, 1474
TatI	WGTACW	1 cut(s)	1257
TauI	GCSGC	1 cut(s)	404
TfiI	GAWTC	6 cut(s)	556, 647, 989, 1156, 1170, 1354
Tru1I	TTAA	3 cut(s)	479, 932, 1590
Tru9I	TTAA	3 cut(s)	479, 932, 1590
TscAI	CASTG	5 cut(s)	292, 1334, 1557, 1567, 1690
TseFI	GTSAC	1 cut(s)	1558
Tsp45I	GTSAC	1 cut(s)	1558
TspDTI	ATGAA	4 cut(s)	30, 211, 437, 1122
TspGWI	ACGGA	1 cut(s)	851
TspRI	CASTG	5 cut(s)	292, 1334, 1557, 1567, 1690
Van91I	CCANNNNNTGG	1 cut(s)	233
VpaK11BI	GGWCC	2 cut(s)	700, 1403
XagI	CCTNNNNNAGG	1 cut(s)	304
XapI	RAATTY	3 cut(s)	566, 1109, 1397
XceI	RCATGY	7 cut(s)	251, 257, 438, 529, 1004, 1327, 1536
XspI	CTAG	1 cut(s)	1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.