Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0002203

Physical Location & Seq

Genomic Coordinates Forward (+)

3180676 .. 3186110

Gene Structure 5435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1045400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGTCTGTGGTTGAGGAACCGCTATACCCAATAGCCGTTCTCATAGACGAGCTTAAAAATGACGATATCCAGCTGCGGTTGAACTCAATCCGCAGGCTATCTACAATTGCACGTGCGCTTGGGGAAGAGCGAACCCGTAAGGAGTTAATCCCTTTTCTGAGCGAAAACAATGACGATGACGATGAGGTGCTTCTTGCAATGGCGGAGGAGTTGGGGGTCTTCATTCCATATGTTGGGGGTGTGGAGCATGCACATGTGTTGCTCCCGCCCCTGGAGACCCTTTGCACTGTTGAGGAAACCTGTGTGAGGGACAAGGCTGTGGAGTCCTTATGTAGGATTGGATCTCAGATGAGGGAGGGTGATTTGGTTAACTGGTTTATTCCTCTTGTGAAGAGGTTGGCAGCTGGTGAATGGTTTACAGCTCGAGTCTCTGCATGTGGGCTTTTTCATATTGCCTACCCTAGTGCACCAGATACATTGAAGACAGAACTACGATCAATTTACAGTCAGTTGTGTCAAGATGACATGCCTATGGTTAGGAGGTCTGCTGCTACAAACCTGGGAAAATTTGCAGCAACTGTTGAACCTGCGCATCTGAAAGCTGATGTCATGTCTATATTTGAGGATCTTACTCAAGATGATCAAGATTCTGTTCGACTCTTGGCCGTTGAGGGCTGTGCTGCTTTGGGGAAGTTGTTGGAGCCCCAAGATTGTGTTGCACATATCCTCCCCGTTATCGTTAACTTCTCTCAGGATAAGTCTTGGCGAGTGCGTTACATGGTTGCAAATCAACTATATGAGCTTTGTGAAGCTGTGGGGCCTGAGCATACGAGGACGGACCTGGTTCCGGCATATGTGCGATTGCTTCGAGATAATGAGGCTGAAGTACGCATAGCAGCTGCTGGCAAAGTTACCAAGTTTTGCCGGATTTTAAGTCCAGAACTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGAGCTGTCATCAGATTCTTCCCAACACGTCCGGTCTGCTTTGGCTTCAGTTATAATGGGCATGGCCCTTGTATTAGGAAAGGATGCAACAATTGAGCAGCTCCTTCCCATTTTTCTTTCACTCCTGAAGGACGAATTTCCAGATGTGCGCCTTAATATCATTAGCAAGCTTGATCAAGTGAATCAGGTTATTGGGATCGATTTGCTATCTCAATCCTTATTACCAGCCATAGTTGAGCTTGCGGAGGATAGACATTGGAGGGTTCGACTTGCAATAATAGAGTACATACCTTTATTGGCAAGTCAGCTGGGTGTAGGGTTCTTTGATGATAAGCTTGGTGCCCTTTGCATGCAGTGGTTGCAGGACAAGGTCTACTCAATTCGTGATGCTGCTGCTAACAATTTAAAGCGTCTAGCAGAAGAGTTTGGTCCAGAATGGGCAATGCAACATATTGTTCCACAGGTCCTCGAGATGATAAACAATCCACACTATTTGTATCGAATGACAATTCTGCGTGCAATCTGTCTCCTTGCCCCGGTTATGGGTTCAGAAATCACATGTTCAAAACTGCTGCCAGTGGTTGTCAATGCGGCAAAGGACAGAGTACCGAACATCAAATTCAATGTTGCAAAGGTGCTGCAGTCCCTTATCTCCATAGTTGATCAGTCTGTGGTGGAGAAAACAATTCGTCCCTCTTTGGTTGAGCTCAGCGAGGACCCAGATGTTGACGTTCGATTTTTCGCTAACCAGGCACTTCAGGCAATTGATCATGTCATGATGTCAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0008150 GO:0010035 GO:0010038 GO:0016020 GO:0019220 GO:0019222 GO:0031323 GO:0042221 GO:0042325 GO:0044424 GO:0044444 GO:0044464 GO:0046686 GO:0050789 GO:0050794 GO:0050896 GO:0051174 GO:0065007 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko03015 ko04071 ko04111 ko04113 ko04114 ko04151 ko04152 ko04261 ko04350 ko04390 ko04391 ko04530 ko04728 ko04730 ko05142 ko05160 ko05165 map03015 map04071 map04111 map04113 map04114 map04151 map04152 map04261 map04350 map04390 map04391 map04530 map04728 map04730 map05142 map05160 map05165

Pfam Domains

Protein Families

HEAT HEAT_2

Protein Analysis

588

Amino Acids

65.54

Weight (kDa)

5.04

Isoelectric Point (pI)

46.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
VPS15-like_hel	PF22956	198 - 309	8.4e-08	VPS15-like, helical domain
PPP2R1A-like_HEAT	PF22646	274 - 351	2.7e-29	PPP2R1A-like HEAT repeat
HEAT_2	PF13646	361 - 460	9.5e-06	HEAT repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002203)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13320 AT1G13320 AT1G13320 AT1G25490 AT3G25800 AT3G25800 AT3G25800
fragaria_vesca	FvH4_4g27700 FvH4_4g27700 FvH4_5g12331 FvH4_5g12331
malus_domestica	MD06G1214700.v1.1 MD13G1044500.v1.1 MD14G1225600.v1.1 MD16G1045400.v1.1
prunus_persica	Prupe.1G307900_v2.0.a1 Prupe.1G307900_v2.0.a1 Prupe.5G220100_v2.0.a1
pyrus_communis	pycom06g19130 pycom13g03910 pycom14g18680 pycom16g03990
rosa_chinensis	RchiOBHm_Chr4g0435561 RchiOBHm_Chr7g0185211
rosa_laevigata	RLG00000006582
rosa_multiflora	Rmu_sc0001940.1_g000038
rosa_roxburghii	Rroxscaffold_3G00269150 Rroxscaffold_5G00376790
rosa_rugosa	Rorug04G0286500 Rorug04G0286500 Rorug04G0286600 Rorug06G0466800 Rorug06G0466900
rosa_samantha	Rh4AG342000 Rh4BG350200 Rh4CG364900 Rh4DG344500 Rh7AG076000 Rh7BG071300 Rh7CG072600 Rh7DG072000
rosa_wichuraiana	Rw4G029830 Rw7G005990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1028
Acc16I	TGCGCA	1 cut(s)	591
Acc36I	ACCTGC	1 cut(s)	595
AccB1I	GGYRCC	1 cut(s)	1313
AccB7I	CCANNNNNTGG	1 cut(s)	233
AccI	GTMKAC	1 cut(s)	1347
AciI	CCGC	7 cut(s)	20, 76, 91, 203, 266, 1217, 1565
AclWI	GGATC	3 cut(s)	349, 633, 1178
AcoI	YGGCCR	1 cut(s)	663
AcsI	RAATTY	3 cut(s)	566, 1109, 1592
AcuI	CTGAAG	4 cut(s)	903, 1005, 1121, 1715
AcvI	CACGTG	1 cut(s)	113
AfaI	GTAC	3 cut(s)	888, 1259, 1581
AfiI	CCNNNNNNNGG	8 cut(s)	233, 271, 306, 333, 847, 1510, 1516, 1517
AflIII	ACRYGT	3 cut(s)	253, 1000, 1532
AgsI	TTSAA	5 cut(s)	82, 481, 584, 1539, 1597
AjiI	CACGTC	1 cut(s)	1003
AjnI	CCWGG	4 cut(s)	270, 558, 840, 1722
Alw21I	GWGCWC	2 cut(s)	469, 1683
Alw26I	GTCTC	3 cut(s)	269, 433, 1505
Alw44I	GTGCAC	1 cut(s)	465
AlwI	GGATC	3 cut(s)	349, 633, 1178
AlwNI	CAGNNNCTG	2 cut(s)	578, 902
Ama87I	CYCGRG	2 cut(s)	423, 1442
AoxI	GGCC	3 cut(s)	663, 818, 1038
ApaLI	GTGCAC	1 cut(s)	465
ApoI	RAATTY	3 cut(s)	566, 1109, 1592
AspLEI	GCGC	3 cut(s)	118, 592, 1125
AspS9I	GGNCC	6 cut(s)	818, 838, 1039, 1403, 1438, 1690
AsuC2I	CCSGG	1 cut(s)	1511
AsuHPI	GGTGA	2 cut(s)	371, 419
AvaI	CYCGRG	2 cut(s)	423, 1442
AvaII	GGWCC	4 cut(s)	838, 1403, 1438, 1690
BaeGI	GKGCMC	2 cut(s)	469, 1318
BanI	GGYRCC	1 cut(s)	1313
BanII	GRGCYC	2 cut(s)	705, 1683
BbrPI	CACGTG	1 cut(s)	113
BbsI	GAAGAC	2 cut(s)	211, 488
Bbv12I	GWGCWC	2 cut(s)	469, 1683
BceAI	ACGGC	2 cut(s)	20, 650
BciT130I	CCWGG	4 cut(s)	272, 560, 842, 1724
BclI	TGATCA	4 cut(s)	640, 1147, 1636, 1741
BcnI	CCSGG	1 cut(s)	1511
BcoDI	GTCTC	3 cut(s)	269, 433, 1505
BfaI	CTAG	3 cut(s)	462, 1388, 1762
BfmI	CTRYAG	1 cut(s)	1613
BfuAI	ACCTGC	1 cut(s)	595
BlpI	GCTNAGC	1 cut(s)	1682
Bme1390I	CCNGG	5 cut(s)	272, 560, 842, 1511, 1724
Bme18I	GGWCC	4 cut(s)	838, 1403, 1438, 1690
BmeT110I	CYCGRG	2 cut(s)	423, 1442
BmgBI	CACGTC	1 cut(s)	1003
BmgT120I	GGNCC	6 cut(s)	818, 838, 1039, 1403, 1438, 1690
BmiI	GGNNCC	6 cut(s)	18, 702, 819, 846, 1315, 1692
BmrFI	CCNGG	5 cut(s)	272, 560, 842, 1511, 1724
BmsI	GCATC	3 cut(s)	601, 1048, 1351
BpiI	GAAGAC	2 cut(s)	211, 488
BpmI	CTGGAG	1 cut(s)	293
Bpu10I	CCTNAGC	1 cut(s)	822
Bpu1102I	GCTNAGC	1 cut(s)	1682
BpuEI	CTTGAG	1 cut(s)	618
BpuMI	CCSGG	1 cut(s)	1511
Bsa29I	ATCGAT	1 cut(s)	1173
BsaAI	YACGTR	1 cut(s)	113
BsaI	GGTCTC	1 cut(s)	269
BsaJI	CCNNGG	3 cut(s)	270, 559, 1509
BsaWI	WCCGGW	1 cut(s)	1005
BsaXI	ACNNNNNCTCC	2 cut(s)	711, 741
Bsc4I	CCNNNNNNNGG	8 cut(s)	233, 271, 306, 333, 847, 1510, 1516, 1517
Bse1I	ACTGG	2 cut(s)	377, 1550
Bse3DI	GCAATG	2 cut(s)	204, 1422
BseBI	CCWGG	4 cut(s)	272, 560, 842, 1724
BseCI	ATCGAT	1 cut(s)	1173
BseDI	CCNNGG	3 cut(s)	270, 559, 1509
BseGI	GGATG	1 cut(s)	1063
BseLI	CCNNNNNNNGG	8 cut(s)	233, 271, 306, 333, 847, 1510, 1516, 1517
BseMI	GCAATG	2 cut(s)	204, 1422
BseMII	CTCAG	5 cut(s)	149, 359, 764, 813, 1696
BseNI	ACTGG	2 cut(s)	377, 1550
BseRI	GAGGAG	1 cut(s)	221
BseSI	GKGCMC	2 cut(s)	469, 1318
BseYI	CCCAGC	1 cut(s)	1282
BshFI	GGCC	3 cut(s)	665, 820, 1040
BshNI	GGYRCC	1 cut(s)	1313
BshVI	ATCGAT	1 cut(s)	1173
BsiHKAI	GWGCWC	2 cut(s)	469, 1683
BsiHKCI	CYCGRG	2 cut(s)	423, 1442
BsiSI	CCGG	4 cut(s)	848, 925, 1006, 1511
BslFI	GGGAC	3 cut(s)	323, 1603, 1650
BslI	CCNNNNNNNGG	8 cut(s)	233, 271, 306, 333, 847, 1510, 1516, 1517
BsmAI	GTCTC	3 cut(s)	269, 433, 1505
BsmFI	GGGAC	3 cut(s)	323, 1603, 1650
BsnI	GGCC	3 cut(s)	665, 820, 1040
Bso31I	GGTCTC	1 cut(s)	269
BsoBI	CYCGRG	2 cut(s)	423, 1442
Bsp1286I	GDGCHC	4 cut(s)	469, 705, 1318, 1683
Bsp143I	GATC	8 cut(s)	341, 494, 625, 640, 1147, 1170, 1636, 1741
Bsp1720I	GCTNAGC	1 cut(s)	1682
BspACI	CCGC	7 cut(s)	20, 76, 91, 203, 266, 1217, 1565
BspANI	GGCC	3 cut(s)	665, 820, 1040
BspCNI	CTCAG	5 cut(s)	150, 358, 763, 814, 1695
BspDI	ATCGAT	1 cut(s)	1173
BspHI	TCATGA	1 cut(s)	1749
BspLI	GGNNCC	6 cut(s)	18, 702, 819, 846, 1315, 1692
BspMAI	CTGCAG	1 cut(s)	1617
BspMI	ACCTGC	1 cut(s)	595
BspPI	GGATC	3 cut(s)	349, 633, 1178
BspQI	GCTCTTC	1 cut(s)	120
BspT107I	GGYRCC	1 cut(s)	1313
BspTNI	GGTCTC	1 cut(s)	269
BsrDI	GCAATG	2 cut(s)	204, 1422
BsrI	ACTGG	2 cut(s)	377, 1550
BssECI	CCNNGG	3 cut(s)	270, 559, 1509
BssMI	GATC	8 cut(s)	341, 494, 625, 640, 1147, 1170, 1636, 1741
Bst2UI	CCWGG	4 cut(s)	272, 560, 842, 1724
Bst4CI	ACNGT	3 cut(s)	289, 506, 580
Bst6I	CTCTTC	3 cut(s)	120, 386, 1389
BstAPI	GCANNNNNTGC	1 cut(s)	1333
BstBAI	YACGTR	1 cut(s)	113
BstC8I	GCNNGC	7 cut(s)	95, 249, 904, 1142, 1215, 1325, 1491
BstDEI	CTNAG	5 cut(s)	158, 345, 750, 822, 1682
BstENI	CCTNNNNNAGG	2 cut(s)	304, 331
BstF5I	GGATG	1 cut(s)	1063
BstHHI	GCGC	3 cut(s)	118, 592, 1125
BstKTI	GATC	8 cut(s)	344, 497, 628, 643, 1150, 1173, 1639, 1744
BstMAI	GTCTC	3 cut(s)	269, 433, 1505
BstMBI	GATC	8 cut(s)	341, 494, 625, 640, 1147, 1170, 1636, 1741
BstMWI	GCNNNNNNNGC	3 cut(s)	1333, 1724, 1733
BstNI	CCWGG	4 cut(s)	272, 560, 842, 1724
BstNSI	RCATGY	6 cut(s)	251, 257, 438, 529, 1327, 1536
BstSCI	CCNGG	5 cut(s)	270, 558, 840, 1509, 1722
BstSFI	CTRYAG	1 cut(s)	1613
BstSLI	GKGCMC	2 cut(s)	469, 1318
BstV2I	GAAGAC	2 cut(s)	211, 488
BstX2I	RGATCY	2 cut(s)	341, 625
BstYI	RGATCY	2 cut(s)	341, 625
Bsu15I	ATCGAT	1 cut(s)	1173
BsuRI	GGCC	3 cut(s)	665, 820, 1040
BsuTUI	ATCGAT	1 cut(s)	1173
BtrI	CACGTC	1 cut(s)	1003
BtsCI	GGATG	1 cut(s)	1063
BtsI	GCAGTG	1 cut(s)	1334
BtsIMutI	CAGTG	3 cut(s)	285, 1334, 1557
BveI	ACCTGC	1 cut(s)	595
Cac8I	GCNNGC	7 cut(s)	95, 249, 904, 1142, 1215, 1325, 1491
CaiI	CAGNNNCTG	2 cut(s)	578, 902
CciI	TCATGA	1 cut(s)	1749
CfoI	GCGC	3 cut(s)	118, 592, 1125
Cfr13I	GGNCC	6 cut(s)	818, 838, 1039, 1403, 1438, 1690
ClaI	ATCGAT	1 cut(s)	1173
CseI	GACGC	1 cut(s)	1373
CsiI	ACCWGGT	1 cut(s)	840
Csp6I	GTAC	3 cut(s)	887, 1258, 1580
CspCI	CAANNNNNGTGG	2 cut(s)	1449, 1484
CviQI	GTAC	3 cut(s)	887, 1258, 1580
DdeI	CTNAG	5 cut(s)	158, 345, 750, 822, 1682
DpnI	GATC	8 cut(s)	343, 496, 627, 642, 1149, 1172, 1638, 1743
DpnII	GATC	8 cut(s)	341, 494, 625, 640, 1147, 1170, 1636, 1741
DraI	TTTAAA	1 cut(s)	1380
EaeI	YGGCCR	1 cut(s)	663
Eam1104I	CTCTTC	3 cut(s)	120, 386, 1389
EarI	CTCTTC	3 cut(s)	120, 386, 1389
EciI	GGCGGA	1 cut(s)	218
Ecl136II	GAGCTC	1 cut(s)	1681
Eco24I	GRGCYC	2 cut(s)	705, 1683
Eco31I	GGTCTC	1 cut(s)	269
Eco32I	GATATC	1 cut(s)	67
Eco47I	GGWCC	4 cut(s)	838, 1403, 1438, 1690
Eco53kI	GAGCTC	1 cut(s)	1681
Eco57I	CTGAAG	4 cut(s)	903, 1005, 1121, 1715
Eco72I	CACGTG	1 cut(s)	113
Eco88I	CYCGRG	2 cut(s)	423, 1442
EcoICRI	GAGCTC	1 cut(s)	1681
EcoNI	CCTNNNNNAGG	2 cut(s)	304, 331
EcoO109I	RGGNCCY	3 cut(s)	818, 1438, 1690
EcoRII	CCWGG	4 cut(s)	270, 558, 840, 1722
EcoRV	GATATC	1 cut(s)	67
EcoT38I	GRGCYC	2 cut(s)	705, 1683
FaqI	GGGAC	3 cut(s)	323, 1603, 1650
FauI	CCCGC	1 cut(s)	273
FauNDI	CATATG	2 cut(s)	229, 853
FbaI	TGATCA	4 cut(s)	640, 1147, 1636, 1741
FblI	GTMKAC	1 cut(s)	1347
FokI	GGATG	1 cut(s)	1070
FriOI	GRGCYC	2 cut(s)	705, 1683
FspBI	CTAG	3 cut(s)	462, 1388, 1762
FspI	TGCGCA	1 cut(s)	591
GlaI	GCGC	3 cut(s)	117, 591, 1124
GsaI	CCCAGC	1 cut(s)	1286
GsuI	CTGGAG	1 cut(s)	293
HaeIII	GGCC	3 cut(s)	665, 820, 1040
HapII	CCGG	4 cut(s)	848, 925, 1006, 1511
HgaI	GACGC	1 cut(s)	1373
HhaI	GCGC	3 cut(s)	118, 592, 1125
Hin6I	GCGC	3 cut(s)	116, 590, 1123
HinP1I	GCGC	3 cut(s)	116, 590, 1123
HincII	GTYRAC	3 cut(s)	370, 742, 1702
HindII	GTYRAC	3 cut(s)	370, 742, 1702
HindIII	AAGCTT	2 cut(s)	1142, 1307
HinfI	GANTC	6 cut(s)	323, 426, 647, 657, 989, 1156
HpaI	GTTAAC	2 cut(s)	370, 742
HpaII	CCGG	4 cut(s)	848, 925, 1006, 1511
HphI	GGTGA	2 cut(s)	371, 419
Hpy166II	GTNNAC	6 cut(s)	370, 417, 467, 742, 1348, 1702
Hpy188I	TCNGA	5 cut(s)	159, 348, 597, 988, 1525
Hpy8I	GTNNAC	6 cut(s)	370, 417, 467, 742, 1348, 1702
HpyAV	CCTTC	3 cut(s)	967, 1088, 1096
HpyCH4III	ACNGT	3 cut(s)	289, 506, 580
HpyCH4IV	ACGT	3 cut(s)	112, 1002, 1704
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1333, 1724, 1733
HpyF3I	CTNAG	5 cut(s)	158, 345, 750, 822, 1682
HpySE526I	ACGT	3 cut(s)	112, 1002, 1704
HspAI	GCGC	3 cut(s)	116, 590, 1123
Ksp22I	TGATCA	4 cut(s)	640, 1147, 1636, 1741
KspAI	GTTAAC	2 cut(s)	370, 742
Kzo9I	GATC	8 cut(s)	341, 494, 625, 640, 1147, 1170, 1636, 1741
LguI	GCTCTTC	1 cut(s)	120
LmnI	GCTCC	5 cut(s)	244, 267, 700, 976, 1080
LweI	GCATC	3 cut(s)	601, 1048, 1351
MabI	ACCWGGT	1 cut(s)	840
MaeI	CTAG	3 cut(s)	462, 1388, 1762
MaeII	ACGT	3 cut(s)	112, 1002, 1704
MaeIII	GTNAC	2 cut(s)	773, 910
MalI	GATC	8 cut(s)	343, 496, 627, 642, 1149, 1172, 1638, 1743
MboI	GATC	8 cut(s)	341, 494, 625, 640, 1147, 1170, 1636, 1741
MboII	GAAGA	7 cut(s)	137, 211, 403, 493, 953, 984, 1406
MfeI	CAATTG	3 cut(s)	105, 1065, 1737
MflI	RGATCY	2 cut(s)	341, 625
MhlI	GDGCHC	4 cut(s)	469, 705, 1318, 1683
MlyI	GAGTC	3 cut(s)	332, 435, 651
MmeI	TCCRAC	1 cut(s)	678
MseI	TTAA	7 cut(s)	54, 146, 369, 741, 932, 1128, 1379
MslI	CAYNNNNRTG	2 cut(s)	252, 530
MspA1I	CMGCKG	4 cut(s)	73, 404, 899, 1282
MspI	CCGG	4 cut(s)	848, 925, 1006, 1511
MspR9I	CCNGG	5 cut(s)	272, 560, 842, 1511, 1724
MunI	CAATTG	3 cut(s)	105, 1065, 1737
MvaI	CCWGG	4 cut(s)	272, 560, 842, 1724
MwoI	GCNNNNNNNGC	3 cut(s)	1333, 1724, 1733
NciI	CCSGG	1 cut(s)	1511
NdeI	CATATG	2 cut(s)	229, 853
NdeII	GATC	8 cut(s)	341, 494, 625, 640, 1147, 1170, 1636, 1741
NlaIV	GGNNCC	6 cut(s)	18, 702, 819, 846, 1315, 1692
NsbI	TGCGCA	1 cut(s)	591
NspI	RCATGY	6 cut(s)	251, 257, 438, 529, 1327, 1536
PaeI	GCATGC	2 cut(s)	251, 1327
PaeR7I	CTCGAG	2 cut(s)	423, 1442
PagI	TCATGA	1 cut(s)	1749
PciI	ACATGT	2 cut(s)	253, 1532
PciSI	GCTCTTC	1 cut(s)	120
PfeI	GAWTC	3 cut(s)	647, 989, 1156
PflFI	GACNNNGTC	1 cut(s)	1343
PflMI	CCANNNNNTGG	1 cut(s)	233
PleI	GAGTC	3 cut(s)	331, 434, 651
PmaCI	CACGTG	1 cut(s)	113
PmlI	CACGTG	1 cut(s)	113
PpsI	GAGTC	3 cut(s)	331, 434, 651
Ppu21I	YACGTR	1 cut(s)	113
PpuMI	RGGWCCY	2 cut(s)	1438, 1690
PscI	ACATGT	2 cut(s)	253, 1532
PsiI	TTATAA	1 cut(s)	1028
Psp124BI	GAGCTC	1 cut(s)	1683
Psp5II	RGGWCCY	2 cut(s)	1438, 1690
Psp6I	CCWGG	4 cut(s)	270, 558, 840, 1722
PspCI	CACGTG	1 cut(s)	113
PspFI	CCCAGC	1 cut(s)	1282
PspGI	CCWGG	4 cut(s)	270, 558, 840, 1722
PspN4I	GGNNCC	6 cut(s)	18, 702, 819, 846, 1315, 1692
PspPI	GGNCC	6 cut(s)	818, 838, 1039, 1403, 1438, 1690
PspPPI	RGGWCCY	2 cut(s)	1438, 1690
PspXI	VCTCGAGB	1 cut(s)	423
PstI	CTGCAG	1 cut(s)	1617
PstNI	CAGNNNCTG	2 cut(s)	578, 902
PsuI	RGATCY	2 cut(s)	341, 625
PsyI	GACNNNGTC	1 cut(s)	1343
PvuII	CAGCTG	4 cut(s)	73, 404, 899, 1282
RsaI	GTAC	3 cut(s)	888, 1259, 1581
RsaNI	GTAC	3 cut(s)	887, 1258, 1580
RseI	CAYNNNNRTG	2 cut(s)	252, 530
SacI	GAGCTC	1 cut(s)	1683
SapI	GCTCTTC	1 cut(s)	120
SaqAI	TTAA	7 cut(s)	54, 146, 369, 741, 932, 1128, 1379
Sau3AI	GATC	8 cut(s)	341, 494, 625, 640, 1147, 1170, 1636, 1741
Sau96I	GGNCC	6 cut(s)	818, 838, 1039, 1403, 1438, 1690
SchI	GAGTC	3 cut(s)	332, 435, 651
ScrFI	CCNGG	5 cut(s)	272, 560, 842, 1511, 1724
SduI	GDGCHC	4 cut(s)	469, 705, 1318, 1683
SexAI	ACCWGGT	1 cut(s)	840
SfaNI	GCATC	3 cut(s)	601, 1048, 1351
SfcI	CTRYAG	1 cut(s)	1613
Sfr274I	CTCGAG	2 cut(s)	423, 1442
SinI	GGWCC	4 cut(s)	838, 1403, 1438, 1690
SlaI	CTCGAG	2 cut(s)	423, 1442
SmiMI	CAYNNNNRTG	2 cut(s)	252, 530
SmlI	CTYRAG	3 cut(s)	423, 633, 1442
SmoI	CTYRAG	3 cut(s)	423, 633, 1442
SphI	GCATGC	2 cut(s)	251, 1327
SsiI	CCGC	7 cut(s)	20, 76, 91, 203, 266, 1217, 1565
SspMI	CTAG	3 cut(s)	462, 1388, 1762
SstI	GAGCTC	1 cut(s)	1683
StyD4I	CCNGG	5 cut(s)	270, 558, 840, 1509, 1722
TaaI	ACNGT	3 cut(s)	289, 506, 580
TaiI	ACGT	3 cut(s)	115, 1005, 1707
TaqI	TCGA	8 cut(s)	424, 655, 868, 1173, 1240, 1443, 1474, 1708
TatI	WGTACW	1 cut(s)	1257
TauI	GCSGC	1 cut(s)	1568
TfiI	GAWTC	3 cut(s)	647, 989, 1156
Tru1I	TTAA	7 cut(s)	54, 146, 369, 741, 932, 1128, 1379
Tru9I	TTAA	7 cut(s)	54, 146, 369, 741, 932, 1128, 1379
TscAI	CASTG	3 cut(s)	292, 1334, 1557
TspDTI	ATGAA	2 cut(s)	211, 437
TspGWI	ACGGA	1 cut(s)	851
TspRI	CASTG	3 cut(s)	292, 1334, 1557
Tth111I	GACNNNGTC	1 cut(s)	1343
Van91I	CCANNNNNTGG	1 cut(s)	233
VneI	GTGCAC	1 cut(s)	465
VpaK11BI	GGWCC	4 cut(s)	838, 1403, 1438, 1690
XagI	CCTNNNNNAGG	2 cut(s)	304, 331
XapI	RAATTY	3 cut(s)	566, 1109, 1592
XceI	RCATGY	6 cut(s)	251, 257, 438, 529, 1327, 1536
XhoI	CTCGAG	2 cut(s)	423, 1442
XmiI	GTMKAC	1 cut(s)	1347
XspI	CTAG	3 cut(s)	462, 1388, 1762

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.