AT1G26470

Chromatin modification-related protein EAF7

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
9155091 .. 9156370
1280 bp
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UTR
Exon/CDS
Intron
AT1G26470.1

Sequence Viewer

Length: 402 bp
ATGGGTGGAAGAACGGACGAAAGTGGCGGAGGAGGTAAAGAGAAAGAGGAAGAGCAAGATGGTTTGTCCGTACACTCTCCCTGTAAAGCTTTACCTTCCTCCGCCTCCTCTCTCTCCAAGGAGCAGTCACAGGTTGAATTAGAGCTAAGGTTATTAGAAGCCCTTGAAATCTATCCTCCTGTTAAACTCCGAGGGATACATCGCCACTTTGTTCTTTATGGTCTGATGGAGTATCTCGGAAGAAGCTTTGACCGACCGTTCACTGCGGATGAGGTTCTGCAGCTACTCGATCGTTTTTACAACATTGAGATGCTGAAATCAGATGATGAGGACATAGACATTCTGAATCACGAGGAAGACTTTACCTTGCCGCAGAGTTTCTTTGATAAGGAAGAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

15.21

Weight (kDa)

4.52

Isoelectric Point (pI)

77.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 27, 102, 266, 371
AfaI GTAC 1 cut(s) 72
AgsI TTSAA 2 cut(s) 137, 167
AluBI AGCT 4 cut(s) 89, 145, 246, 283
AluI AGCT 4 cut(s) 89, 145, 246, 283
ApeKI GCWGC 1 cut(s) 280
BauI CACGAG 1 cut(s) 350
BbsI GAAGAC 1 cut(s) 363
BbvI GCAGC 1 cut(s) 292
BccI CCATC 2 cut(s) 53, 220
BciVI GTATCC 1 cut(s) 189
BfmI CTRYAG 1 cut(s) 278
BfuI GTATCC 1 cut(s) 189
BisI GCNGC 2 cut(s) 281, 371
BlsI GCNGC 2 cut(s) 282, 372
BmsI GCATC 1 cut(s) 300
BpiI GAAGAC 1 cut(s) 363
Bpu10I CCTNAGC 1 cut(s) 146
BsaJI CCNNGG 2 cut(s) 117, 190
BseDI CCNNGG 2 cut(s) 117, 190
BseGI GGATG 1 cut(s) 274
BseRI GAGGAG 2 cut(s) 45, 97
BseXI GCAGC 1 cut(s) 292
Bsh1285I CGRYCG 2 cut(s) 257, 292
BsiEI CGRYCG 2 cut(s) 257, 292
Bsp143I GATC 1 cut(s) 289
BspACI CCGC 4 cut(s) 27, 102, 266, 371
BspMAI CTGCAG 1 cut(s) 282
BspQI GCTCTTC 1 cut(s) 45
BssECI CCNNGG 2 cut(s) 117, 190
BssMI GATC 1 cut(s) 289
BssSI CACGAG 1 cut(s) 350
BssT1I CCWWGG 1 cut(s) 117
Bst2BI CACGAG 1 cut(s) 350
Bst4CI ACNGT 1 cut(s) 258
Bst6I CTCTTC 1 cut(s) 45
BstDEI CTNAG 1 cut(s) 146
BstF5I GGATG 1 cut(s) 274
BstKTI GATC 1 cut(s) 292
BstMBI GATC 1 cut(s) 289
BstMCI CGRYCG 2 cut(s) 257, 292
BstSFI CTRYAG 1 cut(s) 278
BstV1I GCAGC 1 cut(s) 292
BstV2I GAAGAC 1 cut(s) 363
BsuI GTATCC 1 cut(s) 189
BtgZI GCGATG 1 cut(s) 185
BtsCI GGATG 1 cut(s) 274
BtsI GCAGTG 1 cut(s) 261
BtsIMutI CAGTG 1 cut(s) 261
Csp6I GTAC 1 cut(s) 71
CviJI RGCY 5 cut(s) 89, 145, 161, 246, 283
CviKI_1 RGCY 5 cut(s) 89, 145, 161, 246, 283
CviQI GTAC 1 cut(s) 71
DdeI CTNAG 1 cut(s) 146
DpnI GATC 1 cut(s) 291
DpnII GATC 1 cut(s) 289
Eam1104I CTCTTC 1 cut(s) 45
EarI CTCTTC 1 cut(s) 45
EciI GGCGGA 2 cut(s) 42, 91
Eco130I CCWWGG 1 cut(s) 117
EcoT14I CCWWGG 1 cut(s) 117
ErhI CCWWGG 1 cut(s) 117
FaiI YATR 2 cut(s) 219, 335
Fnu4HI GCNGC 2 cut(s) 281, 371
FokI GGATG 1 cut(s) 281
Fsp4HI GCNGC 2 cut(s) 281, 371
GluI GCNGC 2 cut(s) 281, 371
HindIII AAGCTT 2 cut(s) 87, 244
HinfI GANTC 1 cut(s) 346
Hpy166II GTNNAC 2 cut(s) 73, 261
Hpy188I TCNGA 5 cut(s) 191, 225, 239, 322, 345
Hpy188III TCNNGA 1 cut(s) 350
Hpy8I GTNNAC 2 cut(s) 73, 261
HpyAV CCTTC 1 cut(s) 105
HpyCH4III ACNGT 1 cut(s) 258
HpyCH4V TGCA 1 cut(s) 280
HpyF3I CTNAG 1 cut(s) 146
Kzo9I GATC 1 cut(s) 289
LguI GCTCTTC 1 cut(s) 45
LmnI GCTCC 1 cut(s) 121
LpnPI CCDG 3 cut(s) 94, 116, 192
Lsp1109I GCAGC 1 cut(s) 292
LweI GCATC 1 cut(s) 300
MaeIII GTNAC 1 cut(s) 126
MalI GATC 1 cut(s) 291
MboI GATC 1 cut(s) 289
MboII GAAGA 4 cut(s) 21, 62, 252, 368
MluCI AATT 1 cut(s) 137
MseI TTAA 1 cut(s) 183
MslI CAYNNNNRTG 1 cut(s) 308
NdeII GATC 1 cut(s) 289
NmuCI GTSAC 1 cut(s) 126
PciSI GCTCTTC 1 cut(s) 45
PfeI GAWTC 1 cut(s) 346
PkrI GCNGC 2 cut(s) 282, 372
Ple19I CGATCG 1 cut(s) 292
PstI CTGCAG 1 cut(s) 282
PvuI CGATCG 1 cut(s) 292
RsaI GTAC 1 cut(s) 72
RsaNI GTAC 1 cut(s) 71
RseI CAYNNNNRTG 1 cut(s) 308
SapI GCTCTTC 1 cut(s) 45
SaqAI TTAA 1 cut(s) 183
SatI GCNGC 2 cut(s) 281, 371
Sau3AI GATC 1 cut(s) 289
SfaNI GCATC 1 cut(s) 300
SfcI CTRYAG 1 cut(s) 278
SmiMI CAYNNNNRTG 1 cut(s) 308
Sse9I AATT 1 cut(s) 137
SsiI CCGC 4 cut(s) 27, 102, 266, 371
StyI CCWWGG 1 cut(s) 117
TaaI ACNGT 1 cut(s) 258
TaqI TCGA 1 cut(s) 288
TaqII GACCGA 1 cut(s) 267
TasI AATT 1 cut(s) 137
TauI GCSGC 1 cut(s) 373
TfiI GAWTC 1 cut(s) 346
Tru1I TTAA 1 cut(s) 183
Tru9I TTAA 1 cut(s) 183
TscAI CASTG 1 cut(s) 268
TseFI GTSAC 1 cut(s) 126
TseI GCWGC 1 cut(s) 280
Tsp45I GTSAC 1 cut(s) 126
TspGWI ACGGA 2 cut(s) 29, 58
TspRI CASTG 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.