Rorug04G0310600

Chromatin modification-related protein EAF7

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
48610197 .. 48610668
472 bp
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UTR
Exon/CDS
Intron
Rorug04G0310600.1

Sequence Viewer

Length: 192 bp
ATGGATGTGGACTATTTGGTCAGTCACATGACAAAAGAAATTGTCCAACACTTCATGGAAAACCTGCTATTAACAAAGATGGGGAGTCAAGTTCCACTAGTATGGATGAGGATGGTTGTTCATCAACAGTTGAACTGTAAGAGTCTTGTTCATAGTCTTCAAGATTCTGGAACTTATATATCTGCATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

63

Amino Acids

7.33

Weight (kDa)

6.37

Isoelectric Point (pI)

32.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 72
AgsI TTSAA 2 cut(s) 133, 161
AhlI ACTAGT 1 cut(s) 97
BbsI GAAGAC 1 cut(s) 149
BccI CCATC 2 cut(s) 73, 106
BcuI ACTAGT 1 cut(s) 97
BfaI CTAG 1 cut(s) 98
BfuAI ACCTGC 1 cut(s) 72
BpiI GAAGAC 1 cut(s) 149
BseGI GGATG 3 cut(s) 10, 111, 117
BspMI ACCTGC 1 cut(s) 72
Bst4CI ACNGT 2 cut(s) 129, 137
BstF5I GGATG 3 cut(s) 10, 111, 117
BstV2I GAAGAC 1 cut(s) 149
BstXI CCANNNNNNTGG 1 cut(s) 102
BtsCI GGATG 3 cut(s) 10, 111, 117
BveI ACCTGC 1 cut(s) 72
CviAII CATG 2 cut(s) 28, 55
DrdI GACNNNNNNGTC 1 cut(s) 17
DseDI GACNNNNNNGTC 1 cut(s) 17
FaeI CATG 2 cut(s) 31, 58
FaiI YATR 7 cut(s) 29, 56, 103, 153, 177, 179, 187
FatI CATG 2 cut(s) 27, 54
FokI GGATG 3 cut(s) 17, 118, 124
FspBI CTAG 1 cut(s) 98
Hin1II CATG 2 cut(s) 31, 58
HinfI GANTC 3 cut(s) 85, 142, 164
Hpy166II GTNNAC 1 cut(s) 10
Hpy188III TCNNGA 2 cut(s) 161, 168
Hpy8I GTNNAC 1 cut(s) 10
HpyCH4III ACNGT 2 cut(s) 129, 137
HpyCH4V TGCA 1 cut(s) 185
Hsp92II CATG 2 cut(s) 31, 58
LpnPI CCDG 2 cut(s) 77, 153
MaeI CTAG 1 cut(s) 98
MaeIII GTNAC 1 cut(s) 23
MboII GAAGA 1 cut(s) 149
MluCI AATT 1 cut(s) 39
MlyI GAGTC 2 cut(s) 94, 151
MmeI TCCRAC 1 cut(s) 70
MnlI CCTC 1 cut(s) 102
MseI TTAA 1 cut(s) 71
MslI CAYNNNNRTG 1 cut(s) 100
NlaIII CATG 2 cut(s) 31, 58
NmuCI GTSAC 1 cut(s) 23
PfeI GAWTC 1 cut(s) 164
PleI GAGTC 2 cut(s) 93, 150
PpsI GAGTC 2 cut(s) 93, 150
RseI CAYNNNNRTG 1 cut(s) 100
SaqAI TTAA 1 cut(s) 71
SchI GAGTC 2 cut(s) 94, 151
SetI ASST 1 cut(s) 66
SgeI CNNG 8 cut(s) 40, 67, 76, 101, 110, 158, 173, 180
SmiMI CAYNNNNRTG 1 cut(s) 100
SpeI ACTAGT 1 cut(s) 97
Sse9I AATT 1 cut(s) 39
SspMI CTAG 1 cut(s) 98
TaaI ACNGT 2 cut(s) 129, 137
TasI AATT 1 cut(s) 39
TfiI GAWTC 1 cut(s) 164
Tru1I TTAA 1 cut(s) 71
Tru9I TTAA 1 cut(s) 71
TseFI GTSAC 1 cut(s) 23
Tsp45I GTSAC 1 cut(s) 23
TspDTI ATGAA 3 cut(s) 43, 110, 140
XspI CTAG 1 cut(s) 98
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.